BLASTX nr result
ID: Zingiber25_contig00023446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00023446
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ15183.1| hypothetical protein PRUPE_ppa013581mg [Prunus pe... 98 1e-18
ref|XP_004966205.1| PREDICTED: LSM domain-containing protein 1-l... 95 9e-18
dbj|BAK03862.1| predicted protein [Hordeum vulgare subsp. vulgare] 92 6e-17
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm... 92 6e-17
ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus tri... 91 2e-16
ref|NP_001147152.1| sm protein [Zea mays] gi|195607764|gb|ACG257... 91 2e-16
ref|NP_001058358.1| Os06g0677600 [Oryza sativa Japonica Group] g... 91 2e-16
ref|XP_002438850.1| hypothetical protein SORBIDRAFT_10g027190 [S... 91 2e-16
gb|AFW68992.1| hypothetical protein ZEAMMB73_981634 [Zea mays] 90 3e-16
gb|EMS51506.1| hypothetical protein TRIUR3_14582 [Triticum urartu] 89 5e-16
ref|XP_003563405.1| PREDICTED: LSM domain-containing protein 1-l... 89 6e-16
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262... 89 8e-16
ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-a... 88 1e-15
ref|XP_004137364.1| PREDICTED: uncharacterized protein LOC101206... 87 2e-15
ref|NP_680719.1| Small nuclear ribonucleoprotein family protein ... 87 2e-15
gb|AFK39204.1| unknown [Lotus japonicus] 87 2e-15
ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-a... 87 3e-15
ref|XP_006414113.1| hypothetical protein EUTSA_v10026609mg [Eutr... 86 4e-15
gb|EOY27665.1| Small nuclear ribonucleoprotein family protein is... 86 4e-15
gb|EOY27664.1| Small nuclear ribonucleoprotein family protein is... 86 4e-15
>gb|EMJ15183.1| hypothetical protein PRUPE_ppa013581mg [Prunus persica]
Length = 115
Score = 97.8 bits (242), Expect = 1e-18
Identities = 52/81 (64%), Positives = 58/81 (71%)
Frame = +1
Query: 37 EMEEAESFSNPSFLQDVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHC 216
E E AE+ +Q S+ S G DES AV + RKLLFRR+L+G DGRFFLG FHC
Sbjct: 2 EQEAAETL-----VQAASSDGSNPKGPDESEAVNRARKLLFRRMLVGIRDGRFFLGNFHC 56
Query: 217 IDKQGNIILQDAVEYRHTRRS 279
IDKQGNIILQDAVEYR TRRS
Sbjct: 57 IDKQGNIILQDAVEYRSTRRS 77
>ref|XP_004966205.1| PREDICTED: LSM domain-containing protein 1-like [Setaria italica]
Length = 122
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/68 (67%), Positives = 52/68 (76%)
Frame = +1
Query: 88 STRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 267
ST + G SPAV +LRKLLFRR+LIG +DGR+FLG FHCIDKQGNIILQDAVEYR
Sbjct: 21 STPVPLDAAGSSSPAVTKLRKLLFRRMLIGVNDGRYFLGLFHCIDKQGNIILQDAVEYRS 80
Query: 268 TRRSGDPS 291
R S P+
Sbjct: 81 ARHSSPPT 88
>dbj|BAK03862.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 126
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +1
Query: 82 DVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEY 261
D S +++ +GG S V+ LRKLLFRR+L+G +DGR+FLG FHC+DKQGNIILQDAVEY
Sbjct: 20 DGSAASADAAGGSGSQHVSTLRKLLFRRMLVGVNDGRYFLGLFHCVDKQGNIILQDAVEY 79
Query: 262 RHTRRS 279
R RRS
Sbjct: 80 RSARRS 85
>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
gi|223541066|gb|EEF42622.1| conserved hypothetical
protein [Ricinus communis]
Length = 118
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/61 (68%), Positives = 53/61 (86%)
Frame = +1
Query: 97 ASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 276
+S++S + S V+++RKLLFR++L+G DGRFFLGTFHCIDKQGNIILQDAVEYR TRR
Sbjct: 18 SSDKSNSNSSGPVSRVRKLLFRKMLVGIKDGRFFLGTFHCIDKQGNIILQDAVEYRSTRR 77
Query: 277 S 279
+
Sbjct: 78 T 78
>ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222869442|gb|EEF06573.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 109
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +1
Query: 88 STRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 267
ST+A+E S D V++ RKLLFRR+L+G DGRFFLG+FHCIDKQGNIILQDAVEYR+
Sbjct: 10 STQATESSSSD---IVSRARKLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQDAVEYRN 66
Query: 268 TRRS 279
T RS
Sbjct: 67 THRS 70
>ref|NP_001147152.1| sm protein [Zea mays] gi|195607764|gb|ACG25712.1| sm protein [Zea
mays] gi|195627350|gb|ACG35505.1| sm protein [Zea mays]
gi|413943367|gb|AFW76016.1| sm protein isoform 1 [Zea
mays] gi|413943368|gb|AFW76017.1| sm protein isoform 2
[Zea mays]
Length = 120
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = +1
Query: 82 DVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEY 261
D +S G SP+VA+LRKLLFRR+LIG +DGR+F G FHCIDKQGNIILQDAVEY
Sbjct: 17 DTYRNSSTAPVGSSSPSVAKLRKLLFRRMLIGVNDGRYFHGLFHCIDKQGNIILQDAVEY 76
Query: 262 RHTRRSGDPS 291
R R P+
Sbjct: 77 RSARHCSPPT 86
>ref|NP_001058358.1| Os06g0677600 [Oryza sativa Japonica Group]
gi|52076623|dbj|BAD45524.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|52076909|dbj|BAD45921.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|113596398|dbj|BAF20272.1| Os06g0677600 [Oryza sativa
Japonica Group] gi|125556469|gb|EAZ02075.1| hypothetical
protein OsI_24156 [Oryza sativa Indica Group]
gi|125598231|gb|EAZ38011.1| hypothetical protein
OsJ_22356 [Oryza sativa Japonica Group]
gi|215693232|dbj|BAG88614.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 116
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +1
Query: 97 ASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 276
A GG SP V +LRK+LFRR+L+G +DGR+FLG FHC+DKQGNI+LQDAVEYR + R
Sbjct: 10 AETTGGGGSSPHVEKLRKMLFRRMLVGVNDGRYFLGLFHCVDKQGNILLQDAVEYRTSAR 69
Query: 277 SGDPS 291
PS
Sbjct: 70 RRSPS 74
>ref|XP_002438850.1| hypothetical protein SORBIDRAFT_10g027190 [Sorghum bicolor]
gi|241917073|gb|EER90217.1| hypothetical protein
SORBIDRAFT_10g027190 [Sorghum bicolor]
Length = 126
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +1
Query: 103 ERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRRSG 282
+ +G SPAVA+LRKLLFRR+LIG +DGR+F G FHCIDKQGNIILQDAVEYR R
Sbjct: 29 DAAGSSSSPAVAKLRKLLFRRMLIGVNDGRYFHGLFHCIDKQGNIILQDAVEYRSAARHC 88
Query: 283 DP 288
P
Sbjct: 89 SP 90
>gb|AFW68992.1| hypothetical protein ZEAMMB73_981634 [Zea mays]
Length = 122
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +1
Query: 109 SGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRRSGDP 288
+ G SPAVA+LRKLLFRR+LIG +DGR+F G FHCIDKQGNIILQDAVEYR R P
Sbjct: 28 AAGSSSPAVAKLRKLLFRRMLIGVNDGRYFHGLFHCIDKQGNIILQDAVEYRSARHCLPP 87
Query: 289 S 291
+
Sbjct: 88 T 88
>gb|EMS51506.1| hypothetical protein TRIUR3_14582 [Triticum urartu]
Length = 127
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +1
Query: 88 STRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 267
S+ A + G S VA LRKLLFRR+L+G +DGR+FLG FHC+DKQGNIILQDAVEYR
Sbjct: 23 SSAAPTDAAGSGSQHVATLRKLLFRRMLVGVNDGRYFLGLFHCVDKQGNIILQDAVEYRS 82
Query: 268 TRRS 279
RRS
Sbjct: 83 ARRS 86
>ref|XP_003563405.1| PREDICTED: LSM domain-containing protein 1-like [Brachypodium
distachyon]
Length = 123
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/81 (55%), Positives = 55/81 (67%)
Frame = +1
Query: 46 EAESFSNPSFLQDVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDK 225
+ ++F P S+ S + S VA+L+KLLFRR+LIG +DGR+FLG FHCIDK
Sbjct: 6 DGQAFLGPEATYLNSSTTSVDTTSSSSQHVAKLQKLLFRRMLIGVNDGRYFLGLFHCIDK 65
Query: 226 QGNIILQDAVEYRHTRRSGDP 288
QGNIILQDAVEYR R S P
Sbjct: 66 QGNIILQDAVEYRSARHSPSP 86
>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
Length = 116
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +1
Query: 85 VSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYR 264
+ +SE S + S V ++R LLFRR+L+G SDGRFFLG+FHC+DKQGNIILQD VEYR
Sbjct: 12 IHVESSEGSNPNGSNPVTKVRMLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYR 71
Query: 265 HTRRS 279
TRRS
Sbjct: 72 STRRS 76
>ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like isoform 1 [Solanum lycopersicum]
gi|460398877|ref|XP_004244973.1| PREDICTED: small
nuclear ribonucleoprotein-associated protein N-like
isoform 2 [Solanum lycopersicum]
Length = 118
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +1
Query: 70 SFLQDVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQD 249
++L DV + S + + S V+ ++KLL+RR+L+G SDGRFFLGTF+CIDKQGNIILQD
Sbjct: 8 TYLSDVGS--SNQFETNSSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQD 65
Query: 250 AVEYRHTRRS 279
AVEYR TRRS
Sbjct: 66 AVEYRSTRRS 75
>ref|XP_004137364.1| PREDICTED: uncharacterized protein LOC101206200 [Cucumis sativus]
gi|449523864|ref|XP_004168943.1| PREDICTED:
uncharacterized protein LOC101229488 [Cucumis sativus]
Length = 112
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/76 (61%), Positives = 53/76 (69%)
Frame = +1
Query: 52 ESFSNPSFLQDVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQG 231
E S S +QD S S D + ++RKLLFRR+LIG DGRFFLG F+CIDKQG
Sbjct: 2 EQESGGSMVQDGSNVESNPESLDH---IGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQG 58
Query: 232 NIILQDAVEYRHTRRS 279
NIILQDAVEYR TRRS
Sbjct: 59 NIILQDAVEYRSTRRS 74
>ref|NP_680719.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] gi|332658634|gb|AEE84034.1| Small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
Length = 112
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = +1
Query: 88 STRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 267
ST + S G + +++LRKLLFR++L+G DGRFFLG FHCIDKQGNIILQD VEYR
Sbjct: 9 STIVASTSEGSDFDPISRLRKLLFRQMLVGIKDGRFFLGNFHCIDKQGNIILQDTVEYRS 68
Query: 268 TRRS 279
RRS
Sbjct: 69 IRRS 72
>gb|AFK39204.1| unknown [Lotus japonicus]
Length = 111
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1
Query: 118 DESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRRS 279
D S V+++RKLLFRR+L+G DGRFFLG F+CIDKQGNIILQDAVEYR TRRS
Sbjct: 17 DSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRS 70
>ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like [Solanum tuberosum]
Length = 118
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +1
Query: 70 SFLQDVSTRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQD 249
++L +V + S + + S V+ ++KLL+RR+L+G SDGRFFLGTF+CIDKQGNIILQD
Sbjct: 8 TYLSEVGS--SNQLETNNSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQD 65
Query: 250 AVEYRHTRRS 279
AVEYR TRRS
Sbjct: 66 AVEYRSTRRS 75
>ref|XP_006414113.1| hypothetical protein EUTSA_v10026609mg [Eutrema salsugineum]
gi|557115283|gb|ESQ55566.1| hypothetical protein
EUTSA_v10026609mg [Eutrema salsugineum]
Length = 112
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +1
Query: 88 STRASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 267
+T + S G + +A++RKLLFR++L+G DGRFFLG FHCIDKQGNIILQD VEYR
Sbjct: 9 ATTVASTSQGSKLDPIARVRKLLFRQMLVGIKDGRFFLGNFHCIDKQGNIILQDTVEYRS 68
Query: 268 TRRS 279
RRS
Sbjct: 69 IRRS 72
>gb|EOY27665.1| Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma
cacao]
Length = 140
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 97 ASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 276
+S+ + V ++RKLLFRR+L+G DGRFFLGTFHCIDKQGNIILQD++EYR TR
Sbjct: 42 SSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNIILQDSIEYRSTRH 101
Query: 277 S 279
S
Sbjct: 102 S 102
>gb|EOY27664.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 123
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 97 ASERSGGDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 276
+S+ + V ++RKLLFRR+L+G DGRFFLGTFHCIDKQGNIILQD++EYR TR
Sbjct: 14 SSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNIILQDSIEYRSTRH 73
Query: 277 S 279
S
Sbjct: 74 S 74