BLASTX nr result
ID: Zingiber25_contig00023249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00023249
(260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ07542.1| hypothetical protein PRUPE_ppa017529mg [Prunus pe... 102 4e-20
ref|XP_004962479.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
ref|XP_004962478.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
ref|XP_004962477.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
ref|XP_004962476.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
ref|XP_004962475.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
gb|EEE63201.1| hypothetical protein OsJ_18011 [Oryza sativa Japo... 99 5e-19
gb|EEC78956.1| hypothetical protein OsI_19416 [Oryza sativa Indi... 99 5e-19
ref|XP_002323105.2| hypothetical protein POPTR_0016s14910g [Popu... 99 8e-19
ref|XP_004305061.1| PREDICTED: mediator of RNA polymerase II tra... 98 1e-18
gb|AFW77568.1| hypothetical protein ZEAMMB73_628739 [Zea mays] 98 1e-18
ref|XP_003562442.1| PREDICTED: uncharacterized protein LOC100826... 96 5e-18
ref|XP_003562441.1| PREDICTED: uncharacterized protein LOC100826... 96 5e-18
emb|CBI31143.3| unnamed protein product [Vitis vinifera] 96 7e-18
emb|CAQ58623.1| unknown gene [Vitis vinifera] 96 7e-18
ref|XP_002264843.1| PREDICTED: uncharacterized protein LOC100258... 96 7e-18
emb|CAN60712.1| hypothetical protein VITISV_036441 [Vitis vinifera] 96 7e-18
gb|EMT04671.1| hypothetical protein F775_20290 [Aegilops tauschii] 95 9e-18
gb|EMS56747.1| hypothetical protein TRIUR3_20736 [Triticum urartu] 95 9e-18
dbj|BAK02576.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 9e-18
>gb|EMJ07542.1| hypothetical protein PRUPE_ppa017529mg [Prunus persica]
Length = 1316
Score = 102 bits (255), Expect = 4e-20
Identities = 46/85 (54%), Positives = 65/85 (76%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG A + ++ GYA+AY++IL G++ WG+G++ P ++ +RRAR++G HMD +A +
Sbjct: 1178 KLGEANAVSCVMEGYAMAYLVILSGSIEWGIGDNLPSRTL--SRRARIVGSHMDFLAGVL 1235
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGCDPATWKAYV C VGL+V
Sbjct: 1236 EGNISLGCDPATWKAYVSCLVGLMV 1260
>ref|XP_004962479.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X5 [Setaria italica]
Length = 1019
Score = 100 bits (249), Expect = 2e-19
Identities = 44/86 (51%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
KLG AG + ++ GYALAY+LI GA +WG+G + P +TS+++++R R++ H++ +
Sbjct: 882 KLGSAGHVCSLFEGYALAYVLIWSGASIWGVGETSPAYTSIYTSKRQRIVDRHLEFMVKV 941
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
MEGNI+LGC TW++YVLCFVGLLV
Sbjct: 942 MEGNIVLGCGETTWRSYVLCFVGLLV 967
>ref|XP_004962478.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X4 [Setaria italica]
Length = 1089
Score = 100 bits (249), Expect = 2e-19
Identities = 44/86 (51%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
KLG AG + ++ GYALAY+LI GA +WG+G + P +TS+++++R R++ H++ +
Sbjct: 952 KLGSAGHVCSLFEGYALAYVLIWSGASIWGVGETSPAYTSIYTSKRQRIVDRHLEFMVKV 1011
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
MEGNI+LGC TW++YVLCFVGLLV
Sbjct: 1012 MEGNIVLGCGETTWRSYVLCFVGLLV 1037
>ref|XP_004962477.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Setaria italica]
Length = 1225
Score = 100 bits (249), Expect = 2e-19
Identities = 44/86 (51%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
KLG AG + ++ GYALAY+LI GA +WG+G + P +TS+++++R R++ H++ +
Sbjct: 1088 KLGSAGHVCSLFEGYALAYVLIWSGASIWGVGETSPAYTSIYTSKRQRIVDRHLEFMVKV 1147
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
MEGNI+LGC TW++YVLCFVGLLV
Sbjct: 1148 MEGNIVLGCGETTWRSYVLCFVGLLV 1173
>ref|XP_004962476.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Setaria italica]
Length = 1271
Score = 100 bits (249), Expect = 2e-19
Identities = 44/86 (51%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
KLG AG + ++ GYALAY+LI GA +WG+G + P +TS+++++R R++ H++ +
Sbjct: 1134 KLGSAGHVCSLFEGYALAYVLIWSGASIWGVGETSPAYTSIYTSKRQRIVDRHLEFMVKV 1193
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
MEGNI+LGC TW++YVLCFVGLLV
Sbjct: 1194 MEGNIVLGCGETTWRSYVLCFVGLLV 1219
>ref|XP_004962475.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Setaria italica]
Length = 1299
Score = 100 bits (249), Expect = 2e-19
Identities = 44/86 (51%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
KLG AG + ++ GYALAY+LI GA +WG+G + P +TS+++++R R++ H++ +
Sbjct: 1162 KLGSAGHVCSLFEGYALAYVLIWSGASIWGVGETSPAYTSIYTSKRQRIVDRHLEFMVKV 1221
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
MEGNI+LGC TW++YVLCFVGLLV
Sbjct: 1222 MEGNIVLGCGETTWRSYVLCFVGLLV 1247
>gb|EEE63201.1| hypothetical protein OsJ_18011 [Oryza sativa Japonica Group]
Length = 1138
Score = 99.4 bits (246), Expect = 5e-19
Identities = 43/86 (50%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
+LG AGP+ + G+ALAY+L++ GA WG+G + P +TSV++++R RV+ H++ +A+
Sbjct: 1002 RLGSAGPVCSSFEGFALAYVLLVSGASTWGVGETSPVYTSVYTSKRQRVVDRHLEFVANV 1061
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
M+GNI LGC TW+ YV+CFVGLLV
Sbjct: 1062 MQGNIELGCGQVTWRTYVICFVGLLV 1087
>gb|EEC78956.1| hypothetical protein OsI_19416 [Oryza sativa Indica Group]
Length = 1233
Score = 99.4 bits (246), Expect = 5e-19
Identities = 43/86 (50%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
+LG AGP+ + G+ALAY+L++ GA WG+G + P +TSV++++R RV+ H++ +A+
Sbjct: 1097 RLGSAGPVCSSFEGFALAYVLLVSGASTWGVGETSPVYTSVYTSKRQRVVDRHLEFVANV 1156
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
M+GNI LGC TW+ YV+CFVGLLV
Sbjct: 1157 MQGNIELGCGQVTWRTYVICFVGLLV 1182
>ref|XP_002323105.2| hypothetical protein POPTR_0016s14910g [Populus trichocarpa]
gi|550321539|gb|EEF04866.2| hypothetical protein
POPTR_0016s14910g [Populus trichocarpa]
Length = 1346
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG + IL GYA+AYM++L G+ +WG+G + P ++ +RRARV+G+HMD + +
Sbjct: 1210 KLGEVSAVSRILEGYAMAYMVVLSGSALWGIGPTPPAWAL--SRRARVVGVHMDFLVRVL 1267
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGC PATWKAYV C VGL+V
Sbjct: 1268 EGNISLGCHPATWKAYVSCVVGLVV 1292
>ref|XP_004305061.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33B-like [Fragaria vesca subsp. vesca]
Length = 1243
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/85 (51%), Positives = 61/85 (71%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG A + ++ GY +AY++IL G++ WG + P ++ +RRA +IGIHMD +A +
Sbjct: 1107 KLGQASSVSRVMEGYVMAYLVILVGSIEWGFADKLPAWAI--SRRASIIGIHMDFLAGVL 1164
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGCDPATWK+YV C VGL+V
Sbjct: 1165 EGNISLGCDPATWKSYVSCLVGLMV 1189
>gb|AFW77568.1| hypothetical protein ZEAMMB73_628739 [Zea mays]
Length = 1034
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/86 (51%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCP-HTSVFSARRARVIGIHMDLIADG 181
KLG G + +I+ GY LAY+L+ GA VWG+G + P +T +++++R RV+ H++ +A
Sbjct: 897 KLGSGGMVCSIIEGYTLAYVLLFSGATVWGVGETSPAYTLIYTSKRQRVLDRHLEFMARV 956
Query: 182 MEGNIMLGCDPATWKAYVLCFVGLLV 259
MEGNI+LGC ATW++YVLCFV LLV
Sbjct: 957 MEGNIVLGCGDATWRSYVLCFVNLLV 982
>ref|XP_003562442.1| PREDICTED: uncharacterized protein LOC100826944 isoform 2
[Brachypodium distachyon]
Length = 1315
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 GPIVNILIGYALAYMLILCGALVWGLGNSCPHTSV-FSARRARVIGIHMDLIADGMEGNI 196
GP+ + L GYA+A ML CG+L+WG + P + F +RR RV+G HMD IA ++G+I
Sbjct: 1183 GPVSSTLQGYAMANMLFFCGSLLWGSEKTSPAMKMSFLSRRPRVVGTHMDFIAGVLDGHI 1242
Query: 197 MLGCDPATWKAYVLCFVGLLV 259
+LGCDP TWKAYV CFV LLV
Sbjct: 1243 LLGCDPGTWKAYVSCFVFLLV 1263
>ref|XP_003562441.1| PREDICTED: uncharacterized protein LOC100826944 isoform 1
[Brachypodium distachyon]
Length = 1327
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 GPIVNILIGYALAYMLILCGALVWGLGNSCPHTSV-FSARRARVIGIHMDLIADGMEGNI 196
GP+ + L GYA+A ML CG+L+WG + P + F +RR RV+G HMD IA ++G+I
Sbjct: 1195 GPVSSTLQGYAMANMLFFCGSLLWGSEKTSPAMKMSFLSRRPRVVGTHMDFIAGVLDGHI 1254
Query: 197 MLGCDPATWKAYVLCFVGLLV 259
+LGCDP TWKAYV CFV LLV
Sbjct: 1255 LLGCDPGTWKAYVSCFVFLLV 1275
>emb|CBI31143.3| unnamed protein product [Vitis vinifera]
Length = 1342
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG + I+ GYA+AY+L+L G+ +WGLG + P + FS R AR++ H+D +A +
Sbjct: 1205 KLGEVSSVSRIMEGYAMAYLLVLSGSFIWGLG-ARPPSWTFSIR-ARIVRTHLDFLAGVL 1262
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGCDPATWK+YV C VGLLV
Sbjct: 1263 EGNISLGCDPATWKSYVSCLVGLLV 1287
>emb|CAQ58623.1| unknown gene [Vitis vinifera]
Length = 1472
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG + I+ GYA+AY+L+L G+ +WGLG + P + FS R AR++ H+D +A +
Sbjct: 1336 KLGEVSSVSRIMEGYAMAYLLVLSGSFIWGLG-ARPPSWTFSIR-ARIVRTHLDFLAGVL 1393
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGCDPATWK+YV C VGLLV
Sbjct: 1394 EGNISLGCDPATWKSYVSCLVGLLV 1418
>ref|XP_002264843.1| PREDICTED: uncharacterized protein LOC100258764 [Vitis vinifera]
Length = 1330
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG + I+ GYA+AY+L+L G+ +WGLG + P + FS R AR++ H+D +A +
Sbjct: 1194 KLGEVSSVSRIMEGYAMAYLLVLSGSFIWGLG-ARPPSWTFSIR-ARIVRTHLDFLAGVL 1251
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGCDPATWK+YV C VGLLV
Sbjct: 1252 EGNISLGCDPATWKSYVSCLVGLLV 1276
>emb|CAN60712.1| hypothetical protein VITISV_036441 [Vitis vinifera]
Length = 1237
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +2
Query: 5 KLGGAGPIVNILIGYALAYMLILCGALVWGLGNSCPHTSVFSARRARVIGIHMDLIADGM 184
KLG + I+ GYA+AY+L+L G+ +WGLG + P + FS R AR++ H+D +A +
Sbjct: 1101 KLGEVSSVSRIMEGYAMAYLLVLSGSFIWGLG-ARPPSWTFSIR-ARIVRTHLDFLAGVL 1158
Query: 185 EGNIMLGCDPATWKAYVLCFVGLLV 259
EGNI LGCDPATWK+YV C VGLLV
Sbjct: 1159 EGNISLGCDPATWKSYVSCLVGLLV 1183
>gb|EMT04671.1| hypothetical protein F775_20290 [Aegilops tauschii]
Length = 1320
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 GPIVNILIGYALAYMLILCGALVWGLGNSCPHTSV-FSARRARVIGIHMDLIADGMEGNI 196
GP+ + L GYA+A ML CG+L+WG + P + F +RR RV+G HMD IA ++G+I
Sbjct: 1188 GPVASTLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHI 1247
Query: 197 MLGCDPATWKAYVLCFVGLLV 259
+LGCDP TWKAYV CFV L+V
Sbjct: 1248 LLGCDPGTWKAYVSCFVFLVV 1268
>gb|EMS56747.1| hypothetical protein TRIUR3_20736 [Triticum urartu]
Length = 1266
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 GPIVNILIGYALAYMLILCGALVWGLGNSCPHTSV-FSARRARVIGIHMDLIADGMEGNI 196
GP+ + L GYA+A ML CG+L+WG + P + F +RR RV+G HMD IA ++G+I
Sbjct: 1134 GPVASTLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHI 1193
Query: 197 MLGCDPATWKAYVLCFVGLLV 259
+LGCDP TWKAYV CFV L+V
Sbjct: 1194 LLGCDPGTWKAYVSCFVFLVV 1214
>dbj|BAK02576.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1313
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 GPIVNILIGYALAYMLILCGALVWGLGNSCPHTSV-FSARRARVIGIHMDLIADGMEGNI 196
GP+ + L GYA+A ML CG+L+WG + P + F +RR RV+G HMD IA ++G+I
Sbjct: 1181 GPVASTLQGYAMANMLFFCGSLLWGSEKTSPVMKLSFLSRRPRVVGTHMDFIAGVLDGHI 1240
Query: 197 MLGCDPATWKAYVLCFVGLLV 259
+LGCDP TWKAYV CFV L+V
Sbjct: 1241 LLGCDPGTWKAYVSCFVFLVV 1261