BLASTX nr result

ID: Zingiber25_contig00022995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00022995
         (521 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315877.1| hypothetical protein POPTR_0010s12120g [Popu...    55   7e-06
gb|ABK94591.1| unknown [Populus trichocarpa]                           55   7e-06
ref|XP_006650471.1| PREDICTED: uncharacterized protein LOC102707...    55   1e-05

>ref|XP_002315877.1| hypothetical protein POPTR_0010s12120g [Populus trichocarpa]
           gi|222864917|gb|EEF02048.1| hypothetical protein
           POPTR_0010s12120g [Populus trichocarpa]
          Length = 315

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = +3

Query: 3   GSTEWIGASLVLCGSLAVQIL---SSISESFNDEISDEQI-HLNAPRKQNDLSFSAVVVN 170
           G+T WIGA+LVL GSL VQI    SS S S  DE+  E++ HL    KQND S S V V 
Sbjct: 245 GATGWIGAALVLGGSLMVQICGLSSSSSVSGKDEVRSEKVDHLLVSDKQNDFSTSPVRVI 304

Query: 171 QKKNLSNLIRK 203
            KK++  +++K
Sbjct: 305 SKKDVPKILKK 315


>gb|ABK94591.1| unknown [Populus trichocarpa]
          Length = 250

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = +3

Query: 3   GSTEWIGASLVLCGSLAVQIL---SSISESFNDEISDEQI-HLNAPRKQNDLSFSAVVVN 170
           G+T WIGA+LVL GSL VQI    SS S S  DE+  E++ HL    KQND S S V V 
Sbjct: 180 GATGWIGAALVLGGSLMVQICGLSSSSSVSGKDEVRSEKVDHLLVSDKQNDFSTSPVRVI 239

Query: 171 QKKNLSNLIRK 203
            KK++  +++K
Sbjct: 240 SKKDVPKILKK 250


>ref|XP_006650471.1| PREDICTED: uncharacterized protein LOC102707198, partial [Oryza
           brachyantha]
          Length = 385

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = +3

Query: 9   TEWIGASLVLCGSLAVQILSSISE-SFNDEISDEQIHLNAPRKQND-LSFSAVVVNQKKN 182
           T W+GA+LVLCGSL VQ+  S  E S   +       L  P KQ D LS SA+ V+ +KN
Sbjct: 314 TAWLGAALVLCGSLTVQLFGSAPEKSKKVKTPRRNTTLETPLKQQDYLSLSAIPVDSRKN 373

Query: 183 LSNLIRKQDK 212
           + N + ++DK
Sbjct: 374 IGNRLERKDK 383


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