BLASTX nr result

ID: Zingiber25_contig00022522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00022522
         (363 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006379801.1| hypothetical protein POPTR_0008s14180g [Popu...    56   4e-06

>ref|XP_006379801.1| hypothetical protein POPTR_0008s14180g [Populus trichocarpa]
           gi|566183913|ref|XP_006379802.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
           gi|566183915|ref|XP_006379803.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
           gi|566183917|ref|XP_006379804.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
           gi|550333043|gb|ERP57598.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
           gi|550333044|gb|ERP57599.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
           gi|550333045|gb|ERP57600.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
           gi|550333046|gb|ERP57601.1| hypothetical protein
           POPTR_0008s14180g [Populus trichocarpa]
          Length = 609

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 45/114 (39%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
 Frame = +3

Query: 12  DMHSNTTAGASSTGNLYNLSFFSXXXXXXXXXXXXXXMPLP------SDQFPNSRSSGGG 173
           D+H+NT+    S GNL+NLSF S                LP      SD F N    GGG
Sbjct: 315 DIHNNTS-NPPSAGNLFNLSFLSNSSTTNSNNANNSNSNLPTSGLLISDHFNNQNGVGGG 373

Query: 174 LFPSINIKNNV---------PSLFVADPTEPAALSPALPQMSATALLQKAAQMG 308
              + N  NNV         PSLF +       +S     MSATALLQKAAQMG
Sbjct: 374 SEGTNNFSNNVRGNQMTSGVPSLFSSSVQNDNMVS----HMSATALLQKAAQMG 423


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