BLASTX nr result
ID: Zingiber25_contig00022255
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00022255
(316 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 103 2e-20
ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|19439916... 101 1e-19
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 98 1e-18
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] g... 98 1e-18
ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato ba... 97 3e-18
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 95 1e-17
emb|CAA64269.1| unnamed protein product [Dioscorea bacilliform v... 95 1e-17
gb|ABI47987.1| ORF4 protein [Dioscorea bacilliform virus] 95 1e-17
ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|23... 94 1e-17
gb|ADN96024.1| putative polyprotein [Pineapple bacilliform comos... 94 2e-17
gb|ADN96023.1| putative polyprotein [Pineapple bacilliform comos... 94 2e-17
gb|ADN96018.1| polyprotein [Pineapple bacilliform comosus virus] 94 2e-17
gb|ACB14294.1| polyprotein, partial [Pineapple bacilliform comos... 94 2e-17
gb|ACB14292.1| polyprotein, partial [Pineapple bacilliform comos... 94 2e-17
gb|ACB14290.1| polyprotein, partial [Pineapple bacilliform comos... 94 2e-17
gb|ADN96025.1| putative polyprotein [Pineapple bacilliform comos... 93 3e-17
emb|CAA64266.1| unnamed protein product [Dioscorea bacilliform v... 93 4e-17
gb|AEV42076.1| putative polyprotein [Pineapple bacilliform comos... 93 4e-17
gb|ACB14297.1| polyprotein, partial [Pineapple bacilliform erect... 93 4e-17
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata] 92 7e-17
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 103 bits (257), Expect = 2e-20
Identities = 48/69 (69%), Positives = 60/69 (86%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
E++IRTDCQAIISFFNKS+ NK SRVR + FTD+ITGLG++++FQHI+ K+N LAD+LSR
Sbjct: 1763 EIIIRTDCQAIISFFNKSSVNKPSRVRWIGFTDYITGLGIDVKFQHIDGKENSLADSLSR 1822
Query: 133 LVCSLIGPW 107
L CSLI W
Sbjct: 1823 LTCSLIRQW 1831
>ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|194399161|gb|ACF60613.1| ORF3
[Cycad leaf necrosis virus]
Length = 1916
Score = 101 bits (251), Expect = 1e-19
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
E++IRTDCQAIISFF+K+++NK SRVR +TFTDFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 1719 EVVIRTDCQAIISFFDKTSQNKPSRVRWLTFTDFITGIGIPVRFEHISGKDNLLADTLSR 1778
Query: 133 LVCSLIGPWT 104
LV ++ WT
Sbjct: 1779 LVLCMVQGWT 1788
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/64 (71%), Positives = 57/64 (89%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IRTDCQAIISFFNKSA NK SRVR V FTDFITG+G+ ++F+HI+ +DN+LAD+LSR
Sbjct: 1647 ELIIRTDCQAIISFFNKSALNKPSRVRWVAFTDFITGIGINVEFEHIDGRDNVLADSLSR 1706
Query: 133 LVCS 122
L+ S
Sbjct: 1707 LINS 1710
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gi|113901272|gb|ABI47983.1| ORF3 protein [Dioscorea
bacilliform virus]
Length = 1887
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IR+DCQA+ISF+NKS+ NK SRVR + F DF+TGLG+++ F+HI+ KDN LAD+LSR
Sbjct: 1773 ELLIRSDCQALISFYNKSSENKPSRVRWIAFNDFVTGLGIDVTFEHIDGKDNQLADSLSR 1832
Query: 133 LVCSLI---GPWTPSEK 92
LV SL+ G W K
Sbjct: 1833 LVTSLVRHEGKWQQQRK 1849
>ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato badnavirus A]
gi|237846574|gb|ACN56746.1| RNaseH/reverse transcriptase
[Sweetpotato badnavirus A]
Length = 794
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/75 (62%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
E++IRTDC+AI+SFFNKSA NK SR R ++FTD+ITG G++I+ +HI+ KDN+LAD LSR
Sbjct: 586 EMIIRTDCEAIVSFFNKSASNKPSRARWISFTDYITGTGIKIRIEHIDGKDNILADYLSR 645
Query: 133 LVCSL-IGPWTPSEK 92
LV SL I W EK
Sbjct: 646 LVFSLIIAEWKTQEK 660
>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
Length = 1395
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/66 (65%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IRTDC AI++F+NKS+ NK SRVR + F DF+TGLG+ + +HI+ KDN+LADALSR
Sbjct: 1282 ELLIRTDCHAIMAFYNKSSCNKPSRVRWIAFNDFLTGLGIPVTIEHIDGKDNVLADALSR 1341
Query: 133 LVCSLI 116
LVCS+I
Sbjct: 1342 LVCSII 1347
>emb|CAA64269.1| unnamed protein product [Dioscorea bacilliform virus]
Length = 547
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/66 (65%), Positives = 57/66 (86%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IRTDCQAI++F+NKS+ NK SRVR + F DF+TGLG+ + +HI+ K+N+LADALSR
Sbjct: 434 ELLIRTDCQAIMAFYNKSSCNKPSRVRWIAFNDFLTGLGIPVTIEHIDGKNNVLADALSR 493
Query: 133 LVCSLI 116
LVCS+I
Sbjct: 494 LVCSII 499
>gb|ABI47987.1| ORF4 protein [Dioscorea bacilliform virus]
Length = 592
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/72 (61%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IR+DCQA+ISF+NKS+ NK SRVR + F DF+TGLG+++ F+HI+ KD+ LAD+LSR
Sbjct: 478 ELLIRSDCQALISFYNKSSENKPSRVRWIAFNDFVTGLGIDVTFEHIDGKDSQLADSLSR 537
Query: 133 LVCSLI---GPW 107
LV SL+ G W
Sbjct: 538 LVTSLVRHEGKW 549
>ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|237846580|gb|ACN56751.1|
polyprotein [Sweetpotato badnavirus B]
Length = 771
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/66 (68%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
E++IRTDCQAI+SFFNKSA NK SR R ++FTD+ITG G++I+ +HI+ KDN LAD LSR
Sbjct: 562 EMVIRTDCQAIVSFFNKSASNKPSRARWISFTDYITGTGIKIRIEHIDGKDNTLADYLSR 621
Query: 133 LVCSLI 116
LV SLI
Sbjct: 622 LVFSLI 627
>gb|ADN96024.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 410
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 224 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 283
Query: 133 LVCSLI 116
LV ++
Sbjct: 284 LVVMML 289
>gb|ADN96023.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 410
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 224 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 283
Query: 133 LVCSLI 116
LV ++
Sbjct: 284 LVVMML 289
>gb|ADN96018.1| polyprotein [Pineapple bacilliform comosus virus]
Length = 772
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 586 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 645
Query: 133 LVCSLI 116
LV ++
Sbjct: 646 LVVMML 651
>gb|ACB14294.1| polyprotein, partial [Pineapple bacilliform comosus virus]
Length = 278
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 92 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 151
Query: 133 LVCSLI 116
LV ++
Sbjct: 152 LVVMML 157
>gb|ACB14292.1| polyprotein, partial [Pineapple bacilliform comosus virus]
Length = 283
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 92 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 151
Query: 133 LVCSLI 116
LV ++
Sbjct: 152 LVVMML 157
>gb|ACB14290.1| polyprotein, partial [Pineapple bacilliform comosus virus]
Length = 425
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 239 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 298
Query: 133 LVCSLI 116
LV ++
Sbjct: 299 LVVMML 304
>gb|ADN96025.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 412
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD LSR
Sbjct: 226 ELVVRTDCQAIVSFYXKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLADTLSR 285
Query: 133 LVCSLI 116
LV ++
Sbjct: 286 LVVMML 291
>emb|CAA64266.1| unnamed protein product [Dioscorea bacilliform virus]
Length = 551
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IRTDC AI++F+NKS+ NK SRVR + F DF+TGLG+ + +HI+ K+N+LADALSR
Sbjct: 434 ELLIRTDCHAIMAFYNKSSCNKPSRVRWIAFNDFLTGLGIPVTIEHIDGKNNVLADALSR 493
Query: 133 LVCSLI 116
LVCS+I
Sbjct: 494 LVCSII 499
>gb|AEV42076.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 1826
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G ++F+HI+ KDNLLAD LSR
Sbjct: 1640 ELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGAPVKFEHIDGKDNLLADTLSR 1699
Query: 133 LVCSLI 116
LV ++
Sbjct: 1700 LVVMML 1705
>gb|ACB14297.1| polyprotein, partial [Pineapple bacilliform erectifolius virus]
Length = 336
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/66 (62%), Positives = 56/66 (84%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL++RTDC AI+SF+ K A NK SRVR +TF+D+ITG+G+++QF+HI+ KDNLLAD LSR
Sbjct: 147 ELIVRTDCHAIVSFYEKMANNKPSRVRWLTFSDYITGIGVKVQFEHIDGKDNLLADTLSR 206
Query: 133 LVCSLI 116
LV ++
Sbjct: 207 LVVMML 212
>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
Length = 1257
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/65 (64%), Positives = 56/65 (86%)
Frame = -1
Query: 313 ELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLADALSR 134
EL+IR+DCQA+ISF+NKS+ NK SRVR + F DF+TGLG+++ F+HI+ K+N LAD+LSR
Sbjct: 1141 ELLIRSDCQALISFYNKSSENKPSRVRWIAFHDFVTGLGVDVTFEHIDGKNNQLADSLSR 1200
Query: 133 LVCSL 119
LV SL
Sbjct: 1201 LVTSL 1205