BLASTX nr result

ID: Zingiber25_contig00022161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00022161
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ92421.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06

>dbj|BAJ92421.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 539

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
 Frame = -1

Query: 409 SCKDLAKSRRIPPGIAVQALVSQRSKLHMXXXXXXXXXXXXXTLCSPT---VAPDDXXXX 239
           +CKDLA++R IPP IAVQAL  QR                   L SPT   V PDD    
Sbjct: 440 ACKDLARNRLIPPRIAVQALSLQR-----------PPDALKNPLSSPTPKRVVPDDEKEK 488

Query: 238 XXXXXXXXXXXXKVKELEKVCKSLKGQMTKMAKKSLSHGN--ISRGGMPKLC 89
                       +V ELE VCK ++GQM K++ ++ + GN  ++  G+P +C
Sbjct: 489 EVLRLNLRRMQGRVAELEMVCKEMRGQM-KLSPRAAAKGNKALAGRGLPWMC 539


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