BLASTX nr result
ID: Zingiber25_contig00022047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00022047
(851 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258... 288 3e-84
ref|XP_006581125.1| PREDICTED: RNA-binding protein 24-B-like iso... 283 9e-82
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-A-like [Gl... 280 7e-80
ref|XP_002307819.1| RNA recognition motif-containing family prot... 270 3e-76
gb|EXB56267.1| RNA-binding protein 24 [Morus notabilis] 278 4e-76
gb|ESW07979.1| hypothetical protein PHAVU_009G008600g [Phaseolus... 278 4e-76
ref|XP_004500827.1| PREDICTED: RNA-binding protein 24-A-like [Ci... 274 7e-76
ref|XP_006581126.1| PREDICTED: RNA-binding protein 24-B-like iso... 261 2e-75
gb|EOY15889.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 274 6e-75
gb|EMJ10651.1| hypothetical protein PRUPE_ppa009716mg [Prunus pe... 271 6e-75
ref|XP_006849958.1| hypothetical protein AMTR_s00022p00143970 [A... 276 1e-74
ref|XP_002300621.1| RNA recognition motif-containing family prot... 263 1e-72
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol... 261 2e-72
ref|XP_004238460.1| PREDICTED: uncharacterized protein LOC101268... 253 7e-71
ref|XP_006342180.1| PREDICTED: RNA-binding protein 24-B-like [So... 254 2e-70
ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like iso... 261 6e-70
gb|EOY15888.1| RNA-binding family protein isoform 1 [Theobroma c... 256 1e-69
ref|XP_006302646.1| hypothetical protein CARUB_v10020749mg [Caps... 252 4e-69
ref|XP_002889085.1| RNA recognition motif-containing protein [Ar... 253 8e-69
ref|NP_565132.2| RNA recognition motif-containing protein [Arabi... 253 1e-68
>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
Length = 346
Score = 288 bits (736), Expect(2) = 3e-84
Identities = 136/215 (63%), Positives = 158/215 (73%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
+DP P+IDGRRANCNLASLGRP ++ +G R RPV PY+ + +Q PV
Sbjct: 91 LDPAPIIDGRRANCNLASLGRPRPSMSYG-RLRPVTPYLGSVPATRGSYVGNFGYQQPVS 149
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
+SYQ GF YP Y Y YGPEY+YPQ VYNPY G YLQ+YG+PG VNTAIYP+
Sbjct: 150 YSYQQGFMYPSYGYAAYGPEYVYPQGVYNPYPGQQYLQIYGVPGTVNTAIYPYGQLGQTL 209
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y T+QGY+MP HQ +Q GS+VN P+
Sbjct: 210 PSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTSPI 244
Score = 52.0 bits (123), Expect(2) = 3e-84
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQTAV*NEHHDIILR 757
I + VPAQP FIVP HSPQF+QG+G DQT + ++LR
Sbjct: 255 IAAPVPAQPQFIVPAHSPQFIQGSGPDQTTGYEKDETVVLR 295
>ref|XP_006581125.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Glycine max]
Length = 286
Score = 283 bits (723), Expect(2) = 9e-82
Identities = 136/216 (62%), Positives = 155/216 (71%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+F+QFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXS-PTHQVPV 359
DPTPVIDGRRANCNLASLGRP LP+G R RP +PY+ Q PV
Sbjct: 91 ADPTPVIDGRRANCNLASLGRPRPPLPYG-RIRPASPYVGSLQPARGAYVGGFGYQQQPV 149
Query: 360 PFSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXX 539
+SYQ G YP Y Y YGPEY+YPQ++YNPY G YLQ+YG+PGAVNT +YP+
Sbjct: 150 SYSYQQGLVYPPYGYTTYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQA 209
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y IQGY++P HQIV GSNVN PM
Sbjct: 210 IPSGHGYSAIQGYTVPGHQIVPYGGSNVNAITTSPM 245
Score = 48.5 bits (114), Expect(2) = 9e-82
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQTA 724
I + VP QP FIVP HSPQF+QG+G DQTA
Sbjct: 256 IAAPVPGQPQFIVPAHSPQFMQGSGPDQTA 285
>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-A-like [Glycine max]
Length = 286
Score = 280 bits (717), Expect(2) = 7e-80
Identities = 135/216 (62%), Positives = 156/216 (72%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+F+QFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DP+PVIDGRRANCNLASLGRP LP+G R RP +PY+ +Q PV
Sbjct: 91 ADPSPVIDGRRANCNLASLGRPRPPLPYG-RIRPASPYVGSLQPARGAYVGGFGYQQPVS 149
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVN-TAIYPHXXXXXX 539
+SYQ G YP Y Y YGPEY+YPQ++YNPY G YLQ+YG+PGAVN T IYP+
Sbjct: 150 YSYQQGLVYPPYGYTSYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNTTTIYPYGQVGQA 209
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y +QGY++P HQIV GSNVN PM
Sbjct: 210 ITSGHGYSAMQGYTVPGHQIVPYGGSNVNAITTSPM 245
Score = 44.7 bits (104), Expect(2) = 7e-80
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQTA 724
I + VP QP FIVP SPQF+QG+G DQTA
Sbjct: 256 IAAPVPGQPQFIVPAPSPQFMQGSGPDQTA 285
>ref|XP_002307819.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222857268|gb|EEE94815.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 286
Score = 270 bits (691), Expect(2) = 3e-76
Identities = 129/209 (61%), Positives = 152/209 (72%), Gaps = 1/209 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFG+ILEAVVITDKNTGRSKGYGFVTFR+P++A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPDAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTP+IDGRRANCNLASLGRP LP+G RPRP APYI S +Q PV
Sbjct: 91 ADPTPIIDGRRANCNLASLGRPRPPLPYG-RPRPAAPYITSVQTPRGTYVGSFGYQQPVS 149
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPY-TGHHYLQVYGLPGAVNTAIYPHXXXXXX 539
+ YQ G Y Y Y YGPEY+Y Q YNPY TGH YLQ+YG+PG VN+ +YP+
Sbjct: 150 YGYQQGLMYNPYGYAAYGPEYVYQQGAYNPYATGHQYLQIYGVPGTVNSGMYPYGQLSQN 209
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
Y ++ GY++P HQIVQ G +VN
Sbjct: 210 VPGGHGYTSMPGYAVPGHQIVQFGGPSVN 238
Score = 42.4 bits (98), Expect(2) = 3e-76
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQT 721
I + VPAQ FIVP SPQ++QG+GSDQT
Sbjct: 256 IAAAVPAQSQFIVPAPSPQYMQGSGSDQT 284
>gb|EXB56267.1| RNA-binding protein 24 [Morus notabilis]
Length = 286
Score = 278 bits (710), Expect(2) = 4e-76
Identities = 132/215 (61%), Positives = 154/215 (71%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+S+ +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFR+PE+A+RAC
Sbjct: 34 YTKVFVGGLAWETQSDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRAC 93
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DP PVIDGRRANCNLASLGRP +P+G RPRP PY+ + +Q P+
Sbjct: 94 ADPAPVIDGRRANCNLASLGRPRPPMPYG-RPRPATPYVGNVQSARGTYVGNFGYQQPLS 152
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
+ YQ G YPQY Y YGP+Y+YPQ YNPYTG YLQ+YGLPG VNTA+YP+
Sbjct: 153 YGYQ-GLMYPQYGYTTYGPDYVYPQGGYNPYTGQQYLQIYGLPGTVNTAMYPYGQVSQTL 211
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y + GY+MP HQIVQ G +VN PM
Sbjct: 212 PSGQGYTAMHGYAMPGHQIVQFGGPSVNALTTSPM 246
Score = 34.7 bits (78), Expect(2) = 4e-76
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2
Query: 647 VPAQPHFIVPGHSPQFVQGNGSDQT 721
V AQP FIVP S Q+VQG GSDQT
Sbjct: 261 VMAQPQFIVPAPS-QYVQGGGSDQT 284
>gb|ESW07979.1| hypothetical protein PHAVU_009G008600g [Phaseolus vulgaris]
Length = 283
Score = 278 bits (710), Expect(2) = 4e-76
Identities = 135/215 (62%), Positives = 153/215 (71%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTPVIDGRRANCNLASLGRP LP+G R RP +PY +Q PV
Sbjct: 91 ADPTPVIDGRRANCNLASLGRPRPPLPYG-RVRPASPYFGSVQTPRGAYVGGFGYQQPVS 149
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
+SYQ G YP Y Y YGPEY+YPQ +YNPY G YLQ+YG+PG VNT IYP+
Sbjct: 150 YSYQQGLVYPPYGYTAYGPEYIYPQNMYNPYMGQQYLQLYGVPGTVNTTIYPYGQLGQAI 209
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y +QGY++P HQIV + SNVN PM
Sbjct: 210 PGGHGYSAMQGYTVPGHQIVPYA-SNVNAITTSPM 243
Score = 34.7 bits (78), Expect(2) = 4e-76
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQTA 724
I + VP QP FIVP S QF+Q G DQTA
Sbjct: 254 IAAPVPGQPQFIVPAPS-QFMQSGGPDQTA 282
>ref|XP_004500827.1| PREDICTED: RNA-binding protein 24-A-like [Cicer arietinum]
Length = 290
Score = 274 bits (701), Expect(2) = 7e-76
Identities = 131/222 (59%), Positives = 154/222 (69%), Gaps = 7/222 (3%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFG+ILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGV------RPRPVAPYIXXXXXXXXXXXXSPT 344
DP+PVIDGRRANCNLASLGRP LP+G+ R RP +PY+
Sbjct: 91 ADPSPVIDGRRANCNLASLGRPRPPLPYGITLHLKGRVRPASPYVGSLQPARGAYVGGYG 150
Query: 345 H-QVPVPFSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPH 521
+ Q P+ + YQ G YP Y Y YGPEY+YPQ++YNPY G YLQ+YG+PGA NT IYP+
Sbjct: 151 YQQQPLSYGYQQGVVYPPYGYTTYGPEYVYPQSMYNPYVGQQYLQIYGVPGAANTTIYPY 210
Query: 522 XXXXXXXXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y +QGY++P HQ V GSNVN PM
Sbjct: 211 GQLGQAIPGGHGYTAMQGYTVPGHQFVPYGGSNVNAITTSPM 252
Score = 37.4 bits (85), Expect(2) = 7e-76
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQTA 724
I + VP QP FIV SPQF+QG+G DQTA
Sbjct: 263 IAAPVPGQPQFIV---SPQFMQGSGPDQTA 289
>ref|XP_006581126.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Glycine max]
Length = 276
Score = 261 bits (668), Expect(2) = 2e-75
Identities = 131/216 (60%), Positives = 148/216 (68%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+F+QFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXS-PTHQVPV 359
DPTPVIDGRRANCNLASLGRP LP+G R RP +PY+ Q PV
Sbjct: 91 ADPTPVIDGRRANCNLASLGRPRPPLPYG-RIRPASPYVGSLQPARGAYVGGFGYQQQPV 149
Query: 360 PFSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXX 539
+SYQ G YP Y Y YGPEY+YPQ YLQ+YG+PGAVNT +YP+
Sbjct: 150 SYSYQQGLVYPPYGYTTYGPEYIYPQ----------YLQIYGVPGAVNTTVYPYGQVGQA 199
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y IQGY++P HQIV GSNVN PM
Sbjct: 200 IPSGHGYSAIQGYTVPGHQIVPYGGSNVNAITTSPM 235
Score = 48.5 bits (114), Expect(2) = 2e-75
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQTA 724
I + VP QP FIVP HSPQF+QG+G DQTA
Sbjct: 246 IAAPVPGQPQFIVPAHSPQFMQGSGPDQTA 275
>gb|EOY15889.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
[Theobroma cacao]
Length = 284
Score = 274 bits (700), Expect(2) = 6e-75
Identities = 129/208 (62%), Positives = 151/208 (72%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTP+IDGRRANCNLASLGRP +P+G R RP +PYI S +Q P+
Sbjct: 91 ADPTPIIDGRRANCNLASLGRPRPPVPYG-RLRPASPYIGGVQATRGAYVGSFGYQPPLS 149
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
+SYQ G YP Y Y YG EYLYPQ VYNPY YLQ+YG+PG+ TA+YP+
Sbjct: 150 YSYQQGLMYPSYGYPTYGHEYLYPQGVYNPYAAQQYLQIYGVPGSAGTALYPYGQLGQTV 209
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
Y +QGY++P+HQIVQ G + N
Sbjct: 210 PSGHGYSAVQGYALPSHQIVQFGGPSAN 237
Score = 34.7 bits (78), Expect(2) = 6e-75
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 647 VPAQPHFIVPGHSPQFVQGNGSDQT 721
VPAQP FIV S QF+QG+GSDQT
Sbjct: 259 VPAQPQFIVTTPS-QFMQGSGSDQT 282
>gb|EMJ10651.1| hypothetical protein PRUPE_ppa009716mg [Prunus persica]
Length = 281
Score = 271 bits (694), Expect(2) = 6e-75
Identities = 130/215 (60%), Positives = 150/215 (69%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET S+ +RR+FEQFGEILEAVVI+DKNTGRSKGYGFVTFR+PE+A RAC
Sbjct: 29 YTKVFVGGLAWETHSDTMRRYFEQFGEILEAVVISDKNTGRSKGYGFVTFREPEAAARAC 88
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTP+IDGRRANCNLASL RP + +G RPRP APYI +Q PVP
Sbjct: 89 ADPTPIIDGRRANCNLASLRRPRPPMHYG-RPRPAAPYIGSMQATRGAYIGGYGYQQPVP 147
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
++YQ G YP Y Y YGPEY Y Q VYNPY G YLQ+YG+PG VN A+YP+
Sbjct: 148 YNYQQGLMYPNYGYATYGPEYTYSQGVYNPYAGQQYLQMYGVPGTVNAALYPYGQLGQTI 207
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y T+ GY+MPA QIVQ G +VN P+
Sbjct: 208 PGGQGYPTVHGYAMPAQQIVQFGGPSVNAVTTTPV 242
Score = 37.0 bits (84), Expect(2) = 6e-75
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 641 SNVPAQPHFIVPGHSPQFVQGNGSDQTA 724
++V AQPHFIV +PQ++QG+GS+QTA
Sbjct: 255 ASVAAQPHFIVS--APQYMQGSGSEQTA 280
>ref|XP_006849958.1| hypothetical protein AMTR_s00022p00143970 [Amborella trichopoda]
gi|548853556|gb|ERN11539.1| hypothetical protein
AMTR_s00022p00143970 [Amborella trichopoda]
Length = 296
Score = 276 bits (705), Expect(2) = 1e-74
Identities = 130/216 (60%), Positives = 156/216 (72%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
+TKVFVGGLAWET+S+ +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 40 FTKVFVGGLAWETQSDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 99
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DP+P+IDGRRANCNLASLGRP + P+G R R PY+ SPT+ PVP
Sbjct: 100 ADPSPIIDGRRANCNLASLGRPRPSPPYG-RIRSGGPYVGAIQGGRGPYVGSPTYYHPVP 158
Query: 363 FSYQHGFPYPQYSYNPYGPEYLY-PQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXX 539
+SYQ GF YP Y Y YGPEY+Y Q +Y PY GH YLQ+Y PG +NTA+YP+
Sbjct: 159 YSYQQGFAYPPYGYATYGPEYVYAQQNMYTPYVGHQYLQMYSAPGTLNTAVYPYAQVGQP 218
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y +QGY++P+H I+Q SG NVNG P+
Sbjct: 219 LPSGHGYAALQGYAVPSHHIMQFSGPNVNGATATPL 254
Score = 31.6 bits (70), Expect(2) = 1e-74
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 647 VPAQPHFIVPGHSPQFVQG-NGSDQTA 724
V A P F++ HSPQ Q +GSDQTA
Sbjct: 269 VTAPPQFMIAAHSPQLTQATSGSDQTA 295
>ref|XP_002300621.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222842347|gb|EEE79894.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 287
Score = 263 bits (671), Expect(2) = 1e-72
Identities = 127/216 (58%), Positives = 148/216 (68%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFG+ILEAVVITDKNTGRSKGYGFVTFR+PE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTP+IDGRRANCNLASLGRP P+ R RP PYI S +Q PV
Sbjct: 91 ADPTPMIDGRRANCNLASLGRPRPPQPYVGRLRPAPPYIASVQTPRGTYAGSFGYQQPVS 150
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPY-TGHHYLQVYGLPGAVNTAIYPHXXXXXX 539
+ YQ G Y Y Y YGPEY+Y Q VYNPY G YLQ+YG+PG VNT +YP+
Sbjct: 151 YGYQQGLMYHPYGYAAYGPEYVYQQGVYNPYAAGQQYLQIYGVPGTVNTGMYPYGQFGQN 210
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y T+QGY++P H I+Q G VN P+
Sbjct: 211 VPGGHGYTTMQGYAVPGHHIMQFGGPGVNAMTTSPL 246
Score = 38.1 bits (87), Expect(2) = 1e-72
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQT 721
I + VPAQ FIVP SPQ++ +GSDQT
Sbjct: 257 IAAAVPAQQQFIVPAPSPQYMHSSGSDQT 285
>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
RNA-binding protein Musashi homolog 2-like [Cucumis
sativus]
Length = 286
Score = 261 bits (666), Expect(2) = 2e-72
Identities = 127/216 (58%), Positives = 149/216 (68%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGV-RPRPVAPYIXXXXXXXXXXXXSPTHQVPV 359
DPTP+IDGRRANCNLASLGRP L +G R R A Y+ + +Q PV
Sbjct: 91 ADPTPIIDGRRANCNLASLGRPRPPLSYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPV 150
Query: 360 PFSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXX 539
++YQ G YP Y Y YGPEY+YPQ YNP+ G YLQ+YG+PG+ + IY +
Sbjct: 151 SYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQT 210
Query: 540 XXXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y + GY+MP+ QI+Q SG NVN PM
Sbjct: 211 VPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPM 246
Score = 39.3 bits (90), Expect(2) = 2e-72
Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSP-QFVQGNGSDQTA 724
IP+ V AQP F+V HSP QFVQG+GSDQT+
Sbjct: 257 IPAPVAAQPQFVV--HSPSQFVQGSGSDQTS 285
>ref|XP_004238460.1| PREDICTED: uncharacterized protein LOC101268392 [Solanum
lycopersicum]
Length = 287
Score = 253 bits (645), Expect(2) = 7e-71
Identities = 122/208 (58%), Positives = 142/208 (68%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
+TKVFVGGLAWET+S+ LRR FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPES +RAC
Sbjct: 33 FTKVFVGGLAWETQSDTLRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESTRRAC 92
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DP P+IDGRRANCNLASLGRP ++ FG R R P+ S +Q PV
Sbjct: 93 ADPAPIIDGRRANCNLASLGRPRPSVQFG-RLRSPTPFPAGLPAARGAYAGSFGYQQPVS 151
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
+ YQ G Y Y Y YG +Y+YPQ VYNPY G YL +YG+PG VN +YP+
Sbjct: 152 YGYQQGLMYSPYGYATYGTDYVYPQGVYNPYGGQQYLPIYGVPGTVNATMYPYGQLSQAV 211
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
Y T+QGY++P HQI+Q G VN
Sbjct: 212 PGSHSYTTLQGYAVPGHQILQFGGPGVN 239
Score = 42.4 bits (98), Expect(2) = 7e-71
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 647 VPAQPHFIVPGHSPQFVQGNGSDQTA 724
V QP FI+P HSPQF+QG+GSDQ A
Sbjct: 261 VTPQPQFILPTHSPQFMQGSGSDQNA 286
>ref|XP_006342180.1| PREDICTED: RNA-binding protein 24-B-like [Solanum tuberosum]
Length = 287
Score = 254 bits (649), Expect(2) = 2e-70
Identities = 123/208 (59%), Positives = 142/208 (68%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
+TKVFVGGLAWET+S+ LRR FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPES +RAC
Sbjct: 33 FTKVFVGGLAWETQSDTLRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESTRRAC 92
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DP P+IDGRRANCNLASLGRP ++ FG R R P+ S +Q PV
Sbjct: 93 ADPAPIIDGRRANCNLASLGRPRPSVQFG-RLRSSTPFPAGLPAARGAYAGSFGYQQPVS 151
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
+ YQ G Y Y Y YG +Y+YPQ VYNPY G YL +YG+PG VN +YP+
Sbjct: 152 YGYQQGLMYSPYGYATYGADYVYPQGVYNPYGGQQYLPIYGVPGTVNATMYPYGQLSQAV 211
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
Y T+QGY+MP HQI+Q G VN
Sbjct: 212 PGSHSYTTLQGYAMPGHQILQFGGPGVN 239
Score = 39.3 bits (90), Expect(2) = 2e-70
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 647 VPAQPHFIVPGHSPQFVQGNGSDQTA 724
V Q FI+P HSPQF+QG+GSDQ A
Sbjct: 261 VTPQTQFILPTHSPQFMQGSGSDQNA 286
>ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Citrus
sinensis]
Length = 281
Score = 261 bits (666), Expect(2) = 6e-70
Identities = 125/215 (58%), Positives = 149/215 (69%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFR+PE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTP IDGRRANCNLASLGRP + +G R RP + S +Q P+P
Sbjct: 91 ADPTPFIDGRRANCNLASLGRPRPQVLYG-RLRPATLFSGSTQATRGPYIGSFGYQQPLP 149
Query: 363 FSYQHGFPYPQYSYNPYGPEYLYPQTVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXX 542
++YQ G YP Y Y YGPEY+YPQ +YNPY Y+ +YG+PG VNTA+YP+
Sbjct: 150 YNYQQGMVYPSYGYATYGPEYVYPQGIYNPY--QQYVPIYGVPGTVNTAVYPYGQLGQTI 207
Query: 543 XXXXXYMTIQGYSMPAHQIVQLSGSNVNGXEYRPM 647
Y +QGY MP HQI+Q G N+N P+
Sbjct: 208 PGSHAYTPVQGYGMPGHQIMQFGGPNLNAITTSPL 242
Score = 31.2 bits (69), Expect(2) = 6e-70
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 638 PSNVP---AQPHFIVPGHSPQFVQGNGSDQT 721
P+ +P AQ F+VP S QF+QG GSDQT
Sbjct: 250 PTGIPPVQAQHQFLVPAPS-QFMQGGGSDQT 279
>gb|EOY15888.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 319
Score = 256 bits (654), Expect(2) = 1e-69
Identities = 129/243 (53%), Positives = 151/243 (62%), Gaps = 35/243 (14%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
YTKVFVGGLAWET+SE +RR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRAC 90
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRPRPVAPYIXXXXXXXXXXXXSPTHQVPVP 362
DPTP+IDGRRANCNLASLGRP +P+G R RP +PYI S +Q P+
Sbjct: 91 ADPTPIIDGRRANCNLASLGRPRPPVPYG-RLRPASPYIGGVQATRGAYVGSFGYQPPLS 149
Query: 363 FSYQHGFPYPQYS-----------------------------------YNPYGPEYLYPQ 437
+SYQ G YP Y Y YG EYLYPQ
Sbjct: 150 YSYQQGLMYPSYGWTTVERSLVRVQLGMQKVVVAEDMCPSSMFIEQARYPTYGHEYLYPQ 209
Query: 438 TVYNPYTGHHYLQVYGLPGAVNTAIYPHXXXXXXXXXXXXYMTIQGYSMPAHQIVQLSGS 617
VYNPY YLQ+YG+PG+ TA+YP+ Y +QGY++P+HQIVQ G
Sbjct: 210 GVYNPYAAQQYLQIYGVPGSAGTALYPYGQLGQTVPSGHGYSAVQGYALPSHQIVQFGGP 269
Query: 618 NVN 626
+ N
Sbjct: 270 SAN 272
Score = 34.7 bits (78), Expect(2) = 1e-69
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 647 VPAQPHFIVPGHSPQFVQGNGSDQT 721
VPAQP FIV S QF+QG+GSDQT
Sbjct: 294 VPAQPQFIVTTPS-QFMQGSGSDQT 317
>ref|XP_006302646.1| hypothetical protein CARUB_v10020749mg [Capsella rubella]
gi|482571356|gb|EOA35544.1| hypothetical protein
CARUB_v10020749mg [Capsella rubella]
Length = 285
Score = 252 bits (643), Expect(2) = 4e-69
Identities = 124/216 (57%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
+TKVFVGGLAWET+SE LRRHFEQ+GEILEAVVI DKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 23 FTKVFVGGLAWETQSETLRRHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRAC 82
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRP------RPVAPYIXXXXXXXXXXXXSPT 344
VDPTP+IDGRRANCNLASLGRP LP+ + P RP +PYI +
Sbjct: 83 VDPTPIIDGRRANCNLASLGRPRPPLPYALIPNIPGRLRPASPYIGNVQGPRGSLMGNYP 142
Query: 345 HQVPVPFSYQHGFPYPQYSYNPYGPEYLYPQT--VYNPYTGHHYLQVYGLPGAVNTAIYP 518
+Q P P +YQ G YP Y YGPEY+Y Q+ +Y PY G YLQVYG+PGAVN+ +Y
Sbjct: 143 YQQPPPLNYQQGLVYP-YGVTAYGPEYMYSQSQGLYGPYMGQQYLQVYGVPGAVNSPVYQ 201
Query: 519 HXXXXXXXXXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
+ Y +QGYS+P ++QL G V+
Sbjct: 202 YGQLSQTIPSGHGYTAVQGYSVPGSHVLQLGGPTVS 237
Score = 37.4 bits (85), Expect(2) = 4e-69
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQT 721
+P P Q H IV HSPQF+Q +GSDQT
Sbjct: 255 VPGPAPVQSHIIV--HSPQFMQSSGSDQT 281
>ref|XP_002889085.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297334926|gb|EFH65344.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 283
Score = 253 bits (647), Expect(2) = 8e-69
Identities = 125/216 (57%), Positives = 149/216 (68%), Gaps = 8/216 (3%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
+TKVFVGGLAWET+SE LRRHFEQFGEILEAVVI DKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 23 FTKVFVGGLAWETQSETLRRHFEQFGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRAC 82
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRP------RPVAPYIXXXXXXXXXXXXSPT 344
DPTP+IDGRRANCNLASLGRP LP+ + P RP +PYI +
Sbjct: 83 ADPTPIIDGRRANCNLASLGRPRPPLPYALIPNMPGRLRPASPYIGNVQGPRGSLIGNYP 142
Query: 345 HQVPVPFSYQHGFPYPQYSYNPYGPEYLYPQT--VYNPYTGHHYLQVYGLPGAVNTAIYP 518
+Q P+P++YQ G YP Y YGPEY+Y Q+ +Y PY G YLQVYG+PGAVN+ IY
Sbjct: 143 YQQPLPYNYQQGVVYP-YGVTAYGPEYMYSQSQGLYGPYMGQQYLQVYGVPGAVNSPIYQ 201
Query: 519 HXXXXXXXXXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
+ Y +QGYS+P ++QL G V+
Sbjct: 202 YGQLSQTIPSGHGYPAVQGYSVPGSHVLQLGGPTVS 237
Score = 34.7 bits (78), Expect(2) = 8e-69
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQT 721
I P Q H IV HSPQF+Q +GSDQT
Sbjct: 255 ITGPAPVQSHIIV--HSPQFMQSSGSDQT 281
>ref|NP_565132.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197724|gb|AEE35845.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 285
Score = 253 bits (645), Expect(2) = 1e-68
Identities = 124/216 (57%), Positives = 150/216 (69%), Gaps = 8/216 (3%)
Frame = +3
Query: 3 YTKVFVGGLAWETKSEMLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRAC 182
+TKVFVGGLAWET+SE LR+HFEQ+GEILEAVVI DKNTGRSKGYGFVTFRDPE+A+RAC
Sbjct: 23 FTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRAC 82
Query: 183 VDPTPVIDGRRANCNLASLGRPHSTLPFGVRP------RPVAPYIXXXXXXXXXXXXSPT 344
DPTP+IDGRRANCNLASLGRP LP+ V P RP +PYI +
Sbjct: 83 ADPTPIIDGRRANCNLASLGRPRPPLPYAVIPNMPGRLRPASPYIGNVQGPRGSLIGNYP 142
Query: 345 HQVPVPFSYQHGFPYPQYSYNPYGPEYLYPQT--VYNPYTGHHYLQVYGLPGAVNTAIYP 518
+Q P+P++YQ G YP Y YGPEY+Y Q+ +Y+PY G YLQVYG+PGAVN+ +Y
Sbjct: 143 YQQPLPYNYQQGVVYP-YGVTAYGPEYMYSQSQGLYSPYMGQQYLQVYGVPGAVNSPVYQ 201
Query: 519 HXXXXXXXXXXXXYMTIQGYSMPAHQIVQLSGSNVN 626
+ Y +QGYS+P I+QL G V+
Sbjct: 202 YGQLSQTIPNGHGYTAVQGYSVPGSHILQLGGPTVS 237
Score = 35.0 bits (79), Expect(2) = 1e-68
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +2
Query: 635 IPSNVPAQPHFIVPGHSPQFVQGNGSDQT 721
IP P Q H IV HSPQF+Q SDQT
Sbjct: 255 IPGPAPVQSHIIV--HSPQFMQSTASDQT 281