BLASTX nr result
ID: Zingiber25_contig00021987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00021987
(1039 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 382 e-103
ref|XP_006306414.1| hypothetical protein CARUB_v10012347mg [Caps... 377 e-102
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar... 375 e-101
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab... 372 e-100
gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily p... 372 e-100
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 370 e-100
ref|XP_006416469.1| hypothetical protein EUTSA_v10006756mg [Eutr... 369 1e-99
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis] 368 2e-99
gb|EMJ28416.1| hypothetical protein PRUPE_ppa019183mg [Prunus pe... 365 2e-98
ref|XP_006473572.1| PREDICTED: pentatricopeptide repeat-containi... 364 4e-98
ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citr... 364 4e-98
ref|XP_004301846.1| PREDICTED: pentatricopeptide repeat-containi... 363 5e-98
ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containi... 361 2e-97
ref|XP_006386200.1| pentatricopeptide repeat-containing family p... 355 2e-95
ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containi... 352 2e-94
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi... 350 7e-94
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi... 350 7e-94
gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus... 349 9e-94
ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi... 346 1e-92
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ... 342 1e-91
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Vitis vinifera]
Length = 1545
Score = 382 bits (981), Expect = e-103
Identities = 189/344 (54%), Positives = 245/344 (71%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+LHA I + + + FV+TKLVSMYAKCGSL +AR+VF M +RNL+AWSAMIGAY RE
Sbjct: 106 KLHARIGLLEEMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQM 165
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV+ FF MM +G+V PD +LLP+ILQAC N G+ + G+L+HSL ++ G+ +
Sbjct: 166 WREVVQHFFFMMEDGIV-PDEFLLPKILQACGNCGDAETGKLIHSLVIRCGM---NFNIR 221
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
+SN++L++YAKCG L A +FFE M RD VSWNSIITG+CQ E E + +LF +M+ EG
Sbjct: 222 VSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEG 281
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
IEP +TW ILI Y QSGK + AMELM++M+ VPDVFTWTSMISG QN R +AL
Sbjct: 282 IEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQAL 341
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
F EM +G+ PN ++V KG ELHS A K+G +LVGNSLI++Y
Sbjct: 342 ELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMY 401
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+K L DA+++FD +L+KDV++WNSMIGGY QAGYCGKAY+LF
Sbjct: 402 SKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLF 445
Score = 204 bits (518), Expect = 6e-50
Identities = 112/330 (33%), Positives = 180/330 (54%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQ----RNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y++ G DDA + M ++F W++MI + + +R S+ L+LF +M+ G
Sbjct: 292 LINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAG 351
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
+ P+G + + AC++ L G LHS+AVK G + + N+++ MY+K GEL
Sbjct: 352 IE-PNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDL---LVGNSLIDMYSKSGEL 407
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ + K+D +WNS+I G+CQ A LF +M + P+ +TW +I+GY
Sbjct: 408 EDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGY 467
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + AM+L +M++ G + D +W S+I+G QNG ++AL F +MQ + PN
Sbjct: 468 IQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPN 527
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ K KE+H + + V N LI+ YAK + AQ IF
Sbjct: 528 SVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQ 587
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
G+ KD+ SWNS+I GY G A +LF
Sbjct: 588 GISSKDIISWNSLIAGYVLHGCSDSALDLF 617
Score = 98.6 bits (244), Expect = 4e-18
Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 9/337 (2%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
D+ V L+ MY+K G L+DARRVFD + +++++ W++MIG Y + + DLF M
Sbjct: 390 DLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFI-KM 448
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
E V P+ ++ G+ D L K GL+ AS+ N++++ Y +
Sbjct: 449 HESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASW--NSLIAGYLQN 506
Query: 399 GELEMATKFFEGMG----KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITW 566
G A F M + +SV+ SI+ L + + + +
Sbjct: 507 GHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVA 566
Query: 567 TILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQF 746
LI Y +SG A + + + D+ +W S+I+G +G +D AL F +M
Sbjct: 567 NCLIDTYAKSGNIVYAQTIFQGISSK----DIISWNSLIAGYVLHGCSDSALDLFDQMTK 622
Query: 747 SGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVG----NSLIELYAKCD 914
GV P+ + +KGK++ S + + IL G +++I+L +
Sbjct: 623 MGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMME---DYQILPGLEHHSAMIDLLGRSG 679
Query: 915 RLADAQKIFDGM-LEKDVFSWNSMIGGYAQAGYCGKA 1022
+L +A + + M +E D W +++ G G A
Sbjct: 680 KLGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLA 716
Score = 86.3 bits (212), Expect = 2e-14
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 4/272 (1%)
Frame = +3
Query: 231 VIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELE 410
V P+ Y+ ++LQ+C + G+ ++GR LH+ + GLL ++ ++SMYAKCG L
Sbjct: 83 VKPNTYM--QLLQSCIDQGSAELGRKLHA---RIGLLEEMN-PFVETKLVSMYAKCGSLG 136
Query: 411 MATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYH 590
A K F M +R+ +W+++I + + ++ F M +GI P ++
Sbjct: 137 EARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACG 196
Query: 591 QSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSM 770
G E + + R G ++ S+++ + GR A FF M + + +
Sbjct: 197 NCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYR----DRV 252
Query: 771 SVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGM 950
S K +L + G ++ N LI Y++ + DA ++ M
Sbjct: 253 SWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKM 312
Query: 951 ----LEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+ DVF+W SMI G+AQ +A ELF
Sbjct: 313 ESFRIVPDVFTWTSMISGFAQNNRRSQALELF 344
>ref|XP_006306414.1| hypothetical protein CARUB_v10012347mg [Capsella rubella]
gi|482575125|gb|EOA39312.1| hypothetical protein
CARUB_v10012347mg [Capsella rubella]
Length = 1361
Score = 377 bits (967), Expect = e-102
Identities = 182/344 (52%), Positives = 242/344 (70%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LHA + DVFV+TKL+SMYAKCG L DAR+VFD M +RNL+ WSAMIGAY RE+RW
Sbjct: 103 LHARFGLFPEPDVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRW 162
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV +LF MM +GV +PD +L P+ILQ C+N G+++ G+L+HS+ +K G+ S +
Sbjct: 163 REVSNLFHSMMEDGV-LPDAFLFPKILQGCANCGDVETGKLIHSVVIKLGM---SSCLRV 218
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
SN++L++YAKCG+L+ ATKFF M +RD V+WNS++ +CQ +HE A+RL M EGI
Sbjct: 219 SNSILAVYAKCGDLDSATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVRLVEEMEKEGI 278
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
P +TW ILI GY+Q GK E AM LM++M+R G DVFTWT+MISGL NG +AL
Sbjct: 279 APGLVTWNILIGGYNQLGKCEDAMNLMQKMERFGLTADVFTWTAMISGLIHNGMRFQALD 338
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
F +M +GV PN +++ N G E+HS A K+G +LVGNSL+++Y+
Sbjct: 339 MFRKMFLAGVVPNGVTIMSAVSACSCLKVLNLGSEVHSVAVKMGFIDDVLVGNSLVDMYS 398
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
KC L DA+K+FD + KDV++WNSMI GY QAGYCGKAYELF+
Sbjct: 399 KCGELEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Score = 202 bits (514), Expect = 2e-49
Identities = 115/331 (34%), Positives = 179/331 (54%), Gaps = 5/331 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQRNL----FAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L+ Y + G +DA + M + L F W+AMI + + LD+F M G
Sbjct: 288 LIGGYNQLGKCEDAMNLMQKMERFGLTADVFTWTAMISGLIHNGMRFQALDMFRKMFLAG 347
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
VV P+G + + ACS L++G +HS+AVK G ++ + N+++ MY+KCGEL
Sbjct: 348 VV-PNGVTIMSAVSACSCLKVLNLGSEVHSVAVKMGFIDDV---LVGNSLVDMYSKCGEL 403
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A K F+ + +D +WNS+ITG+CQ A LF +M+ + P+ ITW +I+GY
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTKMQDANVRPNIITWNTMISGY 463
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
++G AM+L ++M++ G V + +W +I+G QNG+ DEAL F +MQFS PN
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTASWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ +E+H + V N+L + YAK + ++ IF
Sbjct: 524 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSRSIFK 583
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
GM KD+ +WNS+IGGY G G A +LF+
Sbjct: 584 GMETKDIITWNSLIGGYVLHGKYGPALDLFN 614
Score = 96.7 bits (239), Expect = 1e-17
Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 71/312 (22%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQR----------------------------- 131
DV V LV MY+KCG L+DAR+VFD + +
Sbjct: 386 DVLVGNSLVDMYSKCGELEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTKMQ 445
Query: 132 ------NLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVV---------IPDGYL----- 251
N+ W+ MI Y++ E +DLF M ++G V I GY+
Sbjct: 446 DANVRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTASWNLIIAGYIQNGKK 505
Query: 252 ---------------------LPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLS 368
+ +L AC+N + R +H ++ N +
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR---NLDAIHAVK 562
Query: 369 NTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIE 548
N + YAK G++ + F+GM +D ++WNS+I G+ ++ A+ LF +M+ +GI+
Sbjct: 563 NALTDTYAKSGDIGYSRSIFKGMETKDIITWNSLIGGYVLHGKYGPALDLFNQMKTQGIK 622
Query: 549 PSPITWTILITGYHQSGKPELAMELMEQMKRS-GTVPDVFTWTSMISGLTQNGRTDEALS 725
P+ T + +I + G ++ + +P + ++M+S ++ R +EAL
Sbjct: 623 PNRGTLSSIILAHGLMGNVVEGKKVFHSIANDYHIIPALEHCSAMVSLYGRSNRLEEALQ 682
Query: 726 FFHEMQFSGVNP 761
F EM P
Sbjct: 683 FIQEMNIQSETP 694
Score = 80.1 bits (196), Expect = 1e-12
Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 35/293 (11%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+L+AC ++G++ +GR+LH+ + GL ++ +LSMYAKCG L A K F+ M
Sbjct: 87 LLEACIDSGSIHLGRILHA---RFGLFPEPDV-FVETKLLSMYAKCGCLVDARKVFDSMR 142
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG------------ 584
+R+ +W+++I + + + LF M +G+ P + ++ G
Sbjct: 143 ERNLYTWSAMIGAYSRENRWREVSNLFHSMMEDGVLPDAFLFPKILQGCANCGDVETGKL 202
Query: 585 -----------------------YHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
Y + G + A + +MK DV W S++
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGDLDSATKFFRRMKER----DVVAWNSVLLAYC 258
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
QNG+ +EA+ EM+ G+ P L ++ +GG + +
Sbjct: 259 QNGKHEEAVRLVEEMEKEGIAPG----------------------LVTWNILIGGYNQLG 296
Query: 876 VGNSLIELYAKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+ L K +R L DVF+W +MI G G +A ++F
Sbjct: 297 KCEDAMNLMQKMERFG---------LTADVFTWTAMISGLIHNGMRFQALDMF 340
>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
[Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 894
Score = 375 bits (962), Expect = e-101
Identities = 178/344 (51%), Positives = 244/344 (70%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LHA + DVFV+TKL+SMYAKCG + DAR+VFD M +RNLF WSAMIGAY RE+RW
Sbjct: 103 LHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRW 162
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV LF MM++GV +PD +L P+ILQ C+N G+++ G+++HS+ +K G+ S +
Sbjct: 163 REVAKLFRLMMKDGV-LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGM---SSCLRV 218
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
SN++L++YAKCGEL+ ATKFF M +RD ++WNS++ +CQ +HE A+ L M EGI
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
P +TW ILI GY+Q GK + AM+LM++M+ G DVFTWT+MISGL NG +AL
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
F +M +GV PN++++ N+G E+HS A K+G +LVGNSL+++Y+
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
KC +L DA+K+FD + KDV++WNSMI GY QAGYCGKAYELF+
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Score = 193 bits (491), Expect = 8e-47
Identities = 111/322 (34%), Positives = 173/322 (53%), Gaps = 2/322 (0%)
Frame = +3
Query: 78 KCGSLDDARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVVIPDGYLL 254
KC + D + + G ++F W+AMI + + LD+F M GVV P+ +
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTI 355
Query: 255 PRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEG 434
+ ACS ++ G +HS+AVK G ++ + N+++ MY+KCG+LE A K F+
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDV---LVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 435 MGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELA 614
+ +D +WNS+ITG+CQ A LF RM+ + P+ ITW +I+GY ++G A
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 615 MELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXX 791
M+L ++M++ G V + TW +I+G QNG+ DEAL F +MQFS PNS+++
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 792 XXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGMLEKDVFS 971
+E+H + V N+L + YAK + ++ IF GM KD+ +
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIIT 592
Query: 972 WNSMIGGYAQAGYCGKAYELFS 1037
WNS+IGGY G G A LF+
Sbjct: 593 WNSLIGGYVLHGSYGPALALFN 614
Score = 95.5 bits (236), Expect = 3e-17
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 71/312 (22%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQR----------------------------- 131
DV V LV MY+KCG L+DAR+VFD + +
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 132 ------NLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVV-------------------- 233
N+ W+ MI Y++ E +DLF M ++G V
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 234 ---------------IPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLS 368
+P+ + +L AC+N + R +H ++ N +
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR---NLDAIHAVK 562
Query: 369 NTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIE 548
N + YAK G++E + F GM +D ++WNS+I G+ + A+ LF +M+ +GI
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 549 PSPITWTILITGYHQSGKPELAMELMEQMKRS-GTVPDVFTWTSMISGLTQNGRTDEALS 725
P+ T + +I + G + ++ + +P + ++M+ + R +EAL
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Query: 726 FFHEMQFSGVNP 761
F EM P
Sbjct: 683 FIQEMNIQSETP 694
Score = 84.3 bits (207), Expect = 7e-14
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Frame = +3
Query: 258 RILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGM 437
++L++C ++G++ +GR+LH+ + GL ++ +LSMYAKCG + A K F+ M
Sbjct: 86 KLLESCIDSGSIHLGRILHA---RFGLFTEPDV-FVETKLLSMYAKCGCIADARKVFDSM 141
Query: 438 GKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG----------- 584
+R+ +W+++I + + + +LF M +G+ P + ++ G
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 585 ------------------------YHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGL 692
Y + G+ + A + +M+ DV W S++
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAY 257
Query: 693 TQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSI 872
QNG+ +EA+ EM+ G++P L ++ +GG + +
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPG----------------------LVTWNILIGGYNQL 295
Query: 873 LVGNSLIELYAKCDRLAD-AQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
KCD D QK+ + DVF+W +MI G G +A ++F
Sbjct: 296 ----------GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
Length = 1490
Score = 372 bits (955), Expect = e-100
Identities = 180/344 (52%), Positives = 241/344 (70%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LHA + DVFV+TKL+SMYAKCG L DAR+VFD M +RNL+ WSAMIGAY RE+RW
Sbjct: 103 LHARFGLFPEPDVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRW 162
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV LF MM EGV +PD +L P+ILQ C+N G+++ G+L+HS+ +K G+ S +
Sbjct: 163 REVSKLFRLMMEEGV-LPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGM---SSCLRV 218
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
SN++L++YAKCGE + ATKFF M +RD V+WNS++ +CQ +HE A+ L M EGI
Sbjct: 219 SNSILAVYAKCGEWDFATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGI 278
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
P +TW ILI GY+Q GK + AM+LM++M+ G DVFTWT+MISGL NG +AL
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
F +M +GV PN++++ N G E+HS A K+G +LVGNSL+++Y+
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
KC +L DA+K+FD + KDV++WNSMI GY QAGYCGKAYELF+
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Score = 198 bits (503), Expect = 3e-48
Identities = 111/322 (34%), Positives = 175/322 (54%), Gaps = 2/322 (0%)
Frame = +3
Query: 78 KCGSLDDARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVVIPDGYLL 254
KC + D + + G ++F W+AMI + + LD+F M GVV P+ +
Sbjct: 297 KCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTI 355
Query: 255 PRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEG 434
+ ACS +++G +HS+AVK G ++ + N+++ MY+KCG+LE A K F+
Sbjct: 356 MSAVSACSYLKVINLGSEVHSIAVKMGFIDDV---LVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 435 MGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELA 614
+ +D +WNS+ITG+CQ A LF RM+ + P+ ITW +I+GY ++G A
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIKNGDEGEA 472
Query: 615 MELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXX 791
M+L ++M++ G V + TW +I+G QNG+ D+AL F +MQFS PNS+++
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILSLLP 532
Query: 792 XXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGMLEKDVFS 971
+E+H + V N+L + YAK + ++ IF GM KD+ +
Sbjct: 533 ACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKDIIT 592
Query: 972 WNSMIGGYAQAGYCGKAYELFS 1037
WNS+IGGY G G A ELF+
Sbjct: 593 WNSLIGGYVLHGSYGPALELFN 614
Score = 97.8 bits (242), Expect = 6e-18
Identities = 72/312 (23%), Positives = 125/312 (40%), Gaps = 71/312 (22%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQR----------------------------- 131
DV V LV MY+KCG L+DAR+VFD + +
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 132 ------NLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVV-------------------- 233
N+ W+ MI Y++ E +DLF M ++G V
Sbjct: 446 DANVRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 234 ---------------IPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLS 368
+P+ + +L AC+N + R +H ++ N +
Sbjct: 506 DDALEIFRKMQFSRFMPNSVTILSLLPACANLLGTKMVREIHGCVLRR---NLDAIHAVK 562
Query: 369 NTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIE 548
N + YAK G++ + F GM +D ++WNS+I G+ + A+ LF +M+ +GI+
Sbjct: 563 NALTDTYAKSGDIGYSKTIFMGMETKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIK 622
Query: 549 PSPITWTILITGYHQSGKPELAMELMEQMKRS-GTVPDVFTWTSMISGLTQNGRTDEALS 725
P+ T + +I + G + ++ + +P + ++M+S ++ R +EAL
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVSLYGRSNRLEEALQ 682
Query: 726 FFHEMQFSGVNP 761
F EM P
Sbjct: 683 FIQEMNIQSETP 694
Score = 85.9 bits (211), Expect = 2e-14
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+L++C ++G++ +GR+LH+ + GL ++ +LSMYAKCG L A K F+ M
Sbjct: 87 LLESCIDSGSIHLGRILHA---RFGLFPEPDV-FVETKLLSMYAKCGCLVDARKVFDSMR 142
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG------------ 584
+R+ +W+++I + + + +LF M EG+ P + ++ G
Sbjct: 143 ERNLYTWSAMIGAYSRENRWREVSKLFRLMMEEGVLPDDFLFPKILQGCANCGDVETGKL 202
Query: 585 -----------------------YHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
Y + G+ + A + +MK DV W S++
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGEWDFATKFFRRMKER----DVVAWNSVLLAYC 258
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
QNG+ +EA+ EM+ G++P L ++ +GG + +
Sbjct: 259 QNGKHEEAVELVEEMEKEGISPG----------------------LVTWNILIGGYNQL- 295
Query: 876 VGNSLIELYAKCDRLAD-AQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
KCD D QK+ + + DVF+W +MI G G +A ++F
Sbjct: 296 ---------GKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMF 340
>gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|508722978|gb|EOY14875.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
Length = 890
Score = 372 bits (954), Expect = e-100
Identities = 183/344 (53%), Positives = 247/344 (71%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+LHA + V++ D FV+TKLVSMYAKCGS DAR+VFD M +RNL+AWSAMIGA RE R
Sbjct: 100 KLHARVHLVKESDPFVETKLVSMYAKCGSFVDARKVFDKMKERNLYAWSAMIGACSRELR 159
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++LFF MM +GV +PD L P+ LQAC+N G++ GRLLHSL ++ G++ +
Sbjct: 160 WKEVVELFFLMMEDGV-LPDEILFPKFLQACANCGDVRTGRLLHSLVIRLGMVCFAR--- 215
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
+SN+VL++YAKCG+L A +FFE M +RD V+WNS+I +CQ E++ A LF M +G
Sbjct: 216 VSNSVLAVYAKCGKLSSARRFFENMNERDIVTWNSMILAYCQKGENDEAYGLFYGMWKDG 275
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
I+P +TW ILI Y+Q G+ ++AM LM++M+ S +PDVFTWTSMISGL QNGR +AL
Sbjct: 276 IQPCLVTWNILINSYNQLGQCDVAMGLMKEMEISRIIPDVFTWTSMISGLAQNGRRWQAL 335
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
F EM +G+ PN +++ N G+E+HS A K G ++LVGNSLI++Y
Sbjct: 336 CLFKEMLLAGIKPNGVTITSAVSACASLRVLNMGREIHSIALKKGIIDNVLVGNSLIDMY 395
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
AKC L A+++FD + E+DV++WNSM+ GY QAGYCGKAYELF
Sbjct: 396 AKCGELEAARQVFDKIEERDVYTWNSMVAGYCQAGYCGKAYELF 439
Score = 201 bits (510), Expect = 5e-49
Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 5/331 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQRNL----FAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y + G D A + M + F W++MI + R + L LF +M+ G
Sbjct: 286 LINSYNQLGQCDVAMGLMKEMEISRIIPDVFTWTSMISGLAQNGRRWQALCLFKEMLLAG 345
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
+ P+G + + AC++ L++GR +HS+A+K G++++ + N+++ MYAKCGEL
Sbjct: 346 IK-PNGVTITSAVSACASLRVLNMGREIHSIALKKGIIDNV---LVGNSLIDMYAKCGEL 401
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ + +RD +WNS++ G+CQ A LF +MR ++P+ ITW +I+GY
Sbjct: 402 EAARQVFDKIEERDVYTWNSMVAGYCQAGYCGKAYELFMKMRESDLKPNVITWNTMISGY 461
Query: 588 HQSGKPELAMELMEQMKRSGTV-PDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + AM+L ++M++ G + + +W + I+G Q G D+A F +MQ V+ N
Sbjct: 462 IQNGDEDRAMDLFQRMEQDGKIRRNTASWNAFIAGYVQLGEIDKAFGVFRQMQSCSVSSN 521
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ K KE+H + + + NSLI+ YAK + ++ IFD
Sbjct: 522 SVTILSILPGCANLVAAKKVKEIHGCVLRRNLEFVLSISNSLIDTYAKSGNILYSRIIFD 581
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
GM +D+ SWNS+IGGY G A +LF+
Sbjct: 582 GMSTRDIISWNSIIGGYVLHGCSDAALDLFN 612
Score = 99.4 bits (246), Expect = 2e-18
Identities = 79/325 (24%), Positives = 149/325 (45%), Gaps = 9/325 (2%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
+V V L+ MYAKCG L+ AR+VFD + +R+++ W++M+ Y + + +LF M
Sbjct: 384 NVLVGNSLIDMYAKCGELEAARQVFDKIEERDVYTWNSMVAGYCQAGYCGKAYELFM-KM 442
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
RE + P+ ++ G+ D L + G + + AS+ N ++ Y +
Sbjct: 443 RESDLKPNVITWNTMISGYIQNGDEDRAMDLFQRMEQDGKIRRNTASW--NAFIAGYVQL 500
Query: 399 GELEMATKFFEGMG----KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITW 566
GE++ A F M +SV+ SI+ G L + + + +E
Sbjct: 501 GEIDKAFGVFRQMQSCSVSSNSVTILSILPGCANLVAAKKVKEIHGCVLRRNLEFVLSIS 560
Query: 567 TILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQF 746
LI Y +SG + + + M + D+ +W S+I G +G +D AL F++M+
Sbjct: 561 NSLIDTYAKSGNILYSRIIFDGM----STRDIISWNSIIGGYVLHGCSDAALDLFNQMRK 616
Query: 747 SGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVG----NSLIELYAKCD 914
G+ PN + ++GK++ S + ++ I+ ++I++Y +
Sbjct: 617 LGLKPNRGTFLSIILAHGIAGMVDEGKQIFS---SISDNYEIIPAVEHYAAMIDVYGRSG 673
Query: 915 RLADAQKIFDGM-LEKDVFSWNSMI 986
RL +A + + M +E D W S++
Sbjct: 674 RLGEAVEFIEDMPIEPDSSVWTSLL 698
Score = 77.4 bits (189), Expect = 9e-12
Identities = 74/297 (24%), Positives = 112/297 (37%), Gaps = 39/297 (13%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQAC + G+L++GR LH+ + L+ S ++ ++SMYAKCG A K F+ M
Sbjct: 85 LLQACIDFGSLELGRKLHA---RVHLVKESD-PFVETKLVSMYAKCGSFVDARKVFDKMK 140
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITW------------------ 566
+R+ +W+++I + + + LF M +G+ P I +
Sbjct: 141 ERNLYAWSAMIGACSRELRWKEVVELFFLMMEDGVLPDEILFPKFLQACANCGDVRTGRL 200
Query: 567 -----------------TILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
++ Y + GK A E M D+ TW SMI
Sbjct: 201 LHSLVIRLGMVCFARVSNSVLAVYAKCGKLSSARRFFENMNER----DIVTWNSMILAYC 256
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
Q G DEA F+ M G+ P ++
Sbjct: 257 QKGENDEAYGLFYGMWKDGIQP-----------------------------------CLV 281
Query: 876 VGNSLIELY---AKCDRLADAQKIFD-GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
N LI Y +CD K + + DVF+W SMI G AQ G +A LF
Sbjct: 282 TWNILINSYNQLGQCDVAMGLMKEMEISRIIPDVFTWTSMISGLAQNGRRWQALCLF 338
>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1218
Score = 370 bits (949), Expect = e-100
Identities = 176/344 (51%), Positives = 250/344 (72%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
++HA V++++ F++TKLVSMYAKCGSL DAR++F M ++NL+ WSAMIGA+ REHR
Sbjct: 95 KVHAHFHLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMREKNLYTWSAMIGAFSREHR 154
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++LF+ MM E +PD +LLP+ILQAC N+ ++ G ++HSLA+K G+ G +
Sbjct: 155 WKEVVELFYMMMEENC-LPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGV---DGYPF 210
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
++N++L++YAKCG+L +A+K FE M K ++ +WN++I+G+CQ + E A RLF MR EG
Sbjct: 211 VNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEG 270
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
IEP ++W ILI GY+Q G ++AMELM++M+ GT PDV TWTSMISGL QN + +AL
Sbjct: 271 IEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKAL 330
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
F++M + V PN +++ N+G E+H+ A KLG +LVGNSLI++Y
Sbjct: 331 HLFNDMILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMY 390
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+KC +L +A K+FD M EKDV++WNSMIGGY Q GYCGKA+ LF
Sbjct: 391 SKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLF 434
Score = 180 bits (456), Expect = 9e-43
Identities = 106/321 (33%), Positives = 170/321 (52%), Gaps = 5/321 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMG----QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y + G D A + M ++ W++MI + + S+ L LF DM+
Sbjct: 281 LIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILAR 340
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+G + + AC++ L+ G +H+LAVK G + + N+++ MY+KCG+L
Sbjct: 341 VE-PNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDV---LVGNSLIDMYSKCGKL 396
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A K F+ M ++D +WNS+I G+CQ+ A LF +M+ +P+ ITW +I GY
Sbjct: 397 ENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGY 456
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
+G + AM+L +M+ G + D +W S+ISG Q G+ D+ALS F +MQ +N N
Sbjct: 457 IHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININ 516
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ KE+H + + + NSLI+ YAK + ++ IFD
Sbjct: 517 SVTILSVLPACANLIALKMVKEIHGCVIRRNLDSLLPITNSLIDTYAKSGNIGYSRTIFD 576
Query: 945 GMLEKDVFSWNSMIGGYAQAG 1007
L KD +WNS+I GY G
Sbjct: 577 RALFKDFITWNSLIAGYVLFG 597
Score = 80.5 bits (197), Expect = 1e-12
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 6/248 (2%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L+ MY+KCG L++A +VFD M +++++ W++MIG Y + + LF M
Sbjct: 379 DVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQ 438
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
+ P+ ++ + G+ D L + G + AS+ N+++S Y +
Sbjct: 439 KSETQ-PNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIKRDTASW--NSLISGYLQI 495
Query: 399 GELEMATKFFEGMGKRDSVSWNSI-ITGHCQLSEHEVAMRLFARMRAEGIEPS-----PI 560
G+ + A F M + S++ NS+ I + +A+++ + I + PI
Sbjct: 496 GQKDKALSIFRQM-QSFSININSVTILSVLPACANLIALKMVKEIHGCVIRRNLDSLLPI 554
Query: 561 TWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEM 740
T LI Y +SG + + ++ D TW S+I+G G +D AL +M
Sbjct: 555 T-NSLIDTYAKSGNIGYSRTIFDR----ALFKDFITWNSLIAGYVLFGCSDAALGLVDQM 609
Query: 741 QFSGVNPN 764
+ G+ PN
Sbjct: 610 KKLGIKPN 617
>ref|XP_006416469.1| hypothetical protein EUTSA_v10006756mg [Eutrema salsugineum]
gi|557094240|gb|ESQ34822.1| hypothetical protein
EUTSA_v10006756mg [Eutrema salsugineum]
Length = 893
Score = 369 bits (946), Expect = 1e-99
Identities = 177/344 (51%), Positives = 240/344 (69%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LH+ + DVF++TKL+SMYAKCG L DAR+VFD M +RNL+ WSAMIGAY REHRW
Sbjct: 103 LHSRFGLLPQPDVFLETKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSREHRW 162
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV LF MM +GV +PD +LLP+ILQ C+N G+++ G+L+HS+ +K G+ + +
Sbjct: 163 KEVSKLFRLMMGDGV-LPDDFLLPKILQGCANCGDVETGKLIHSVVIKLGM---TSCLRV 218
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
SN++L++YAKCGEL +ATKFF M +RD V+WNS++ +CQ +HE A+ L M EGI
Sbjct: 219 SNSILAVYAKCGELSLATKFFRRMEERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGI 278
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
P +TW ILI GY+Q GK + AM+LM++M+ G DVFTWT+MISGL NG+ +AL
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMESFGVTADVFTWTAMISGLIHNGKRYQALD 338
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
F M +GV PN +++ N G E+HS A K+G +LVGNSL+++Y+
Sbjct: 339 TFRRMFLAGVVPNGVTIMSAVSACSCLKVLNLGSEVHSIAVKMGFMDDVLVGNSLVDMYS 398
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
KC +L DA+K+FD + KDV++WNSMI GY A YCGKAYELF+
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCHAEYCGKAYELFT 442
Score = 201 bits (512), Expect = 3e-49
Identities = 113/322 (35%), Positives = 177/322 (54%), Gaps = 2/322 (0%)
Frame = +3
Query: 78 KCGSLDDARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVVIPDGYLL 254
KC + D + + G ++F W+AMI + + + LD F M GVV P+G +
Sbjct: 297 KCDAAMDLMQKMESFGVTADVFTWTAMISGLIHNGKRYQALDTFRRMFLAGVV-PNGVTI 355
Query: 255 PRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEG 434
+ ACS L++G +HS+AVK G ++ + N+++ MY+KCG+LE A K F+
Sbjct: 356 MSAVSACSCLKVLNLGSEVHSIAVKMGFMDDV---LVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 435 MGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELA 614
+ +D +WNS+ITG+C A LF RM+ ++P+ ITW +I+GY ++G A
Sbjct: 413 VKNKDVYTWNSMITGYCHAEYCGKAYELFTRMQDANVKPNIITWNTMISGYIKNGDEGEA 472
Query: 615 MELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXX 791
M+L ++M++ G V + +W +I+G QNG+ DEAL F +MQFS PNS+++
Sbjct: 473 MDLFQRMEKDGKVQRNTASWNLIIAGYIQNGKKDEALELFRKMQFSRFTPNSVTILSLLP 532
Query: 792 XXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGMLEKDVFS 971
+E+H + V N+L + YAK +A A+ IF GM KD+ +
Sbjct: 533 ACANLLATKMVREIHGCVLRRNLDAVHAVKNALTDTYAKSGDIAYARTIFKGMETKDIIT 592
Query: 972 WNSMIGGYAQAGYCGKAYELFS 1037
WNS+IGGY G G A +LF+
Sbjct: 593 WNSLIGGYVLHGRYGPALDLFN 614
Score = 97.4 bits (241), Expect = 8e-18
Identities = 75/312 (24%), Positives = 127/312 (40%), Gaps = 71/312 (22%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQR----------------------------- 131
DV V LV MY+KCG L+DAR+VFD + +
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCHAEYCGKAYELFTRMQ 445
Query: 132 ------NLFAWSAMIGAYVREHRWSEVLDLFFDMMREGVV---------IPDGYL----- 251
N+ W+ MI Y++ E +DLF M ++G V I GY+
Sbjct: 446 DANVKPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTASWNLIIAGYIQNGKK 505
Query: 252 ---------------------LPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLS 368
+ +L AC+N + R +H ++ N +
Sbjct: 506 DEALELFRKMQFSRFTPNSVTILSLLPACANLLATKMVREIHGCVLRR---NLDAVHAVK 562
Query: 369 NTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIE 548
N + YAK G++ A F+GM +D ++WNS+I G+ + A+ LF +M+ +GI+
Sbjct: 563 NALTDTYAKSGDIAYARTIFKGMETKDIITWNSLIGGYVLHGRYGPALDLFNQMKTQGIK 622
Query: 549 PSPITWTILITGYHQSGKPELAMELMEQMKRS-GTVPDVFTWTSMISGLTQNGRTDEALS 725
P+ T + +I + G + ++ + +P + ++MIS ++ R +EA+
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFSSIADDYNIIPALEHCSAMISLYGRSNRLEEAVQ 682
Query: 726 FFHEMQFSGVNP 761
F EM P
Sbjct: 683 FIQEMNVQSETP 694
Score = 84.3 bits (207), Expect = 7e-14
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 36/294 (12%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+L++C ++G++ +GR+LHS + GLL +L +LSMYAKCG L A K F+ M
Sbjct: 87 LLESCIDSGSVHLGRILHS---RFGLLPQPDV-FLETKLLSMYAKCGCLVDARKVFDSMR 142
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG------------ 584
+R+ +W+++I + + + +LF M +G+ P ++ G
Sbjct: 143 ERNLYTWSAMIGAYSREHRWKEVSKLFRLMMGDGVLPDDFLLPKILQGCANCGDVETGKL 202
Query: 585 -----------------------YHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
Y + G+ LA + +M+ DV W S++
Sbjct: 203 IHSVVIKLGMTSCLRVSNSILAVYAKCGELSLATKFFRRMEER----DVVAWNSVLLAYC 258
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
QNG+ +EA+ EM+ G++P L ++ +GG + +
Sbjct: 259 QNGKHEEAVELVEEMEKEGISPG----------------------LVTWNILIGGYNQL- 295
Query: 876 VGNSLIELYAKCDRLAD-AQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
KCD D QK+ + DVF+W +MI G G +A + F
Sbjct: 296 ---------GKCDAAMDLMQKMESFGVTADVFTWTAMISGLIHNGKRYQALDTF 340
>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
Length = 880
Score = 368 bits (944), Expect = 2e-99
Identities = 181/345 (52%), Positives = 243/345 (70%), Gaps = 1/345 (0%)
Frame = +3
Query: 3 RLHASISS-VRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREH 179
+LHA + V+ + FV+TKLVSMYAKCG L DARRVFDGM +RNLF WSAMIGA RE
Sbjct: 92 KLHARMMGLVQYVNPFVETKLVSMYAKCGCLHDARRVFDGMRERNLFTWSAMIGACSREQ 151
Query: 180 RWSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGAS 359
RW EVL LF+ MM +G+ +PD +LLP+IL+AC N + +++HS+ V+ G G+
Sbjct: 152 RWKEVLKLFYLMMGDGI-LPDKFLLPKILEACGNCADFKTAKVIHSMVVRCGFC---GSI 207
Query: 360 YLSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAE 539
+ N++L++YAKCG+L A +FFE M KRD VSWN+II+G CQ E A RLF +R E
Sbjct: 208 RVINSILAVYAKCGKLNWARRFFESMDKRDLVSWNAIISGFCQNGRMEEATRLFDAVREE 267
Query: 540 GIEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEA 719
G EP +TW I+I Y+Q G+ ++AM LM++M+ G VPDVFTWTS+ISG QN R ++A
Sbjct: 268 GTEPGLVTWNIMIASYNQLGQTDVAMGLMKKMESLGIVPDVFTWTSLISGFAQNNRRNQA 327
Query: 720 LSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIEL 899
L F EM +GV PN++++ KG E+H+++ K+G +LVGNSLI++
Sbjct: 328 LDLFKEMLLAGVKPNAVTITSAVSACASLKSLGKGLEIHAFSIKIGLIEDVLVGNSLIDM 387
Query: 900 YAKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
Y+KC L AQ++FD ++EKDVF+WNS+IGGY QAGYCGKA ELF
Sbjct: 388 YSKCGELEAAQEVFDMIIEKDVFTWNSLIGGYCQAGYCGKACELF 432
Score = 192 bits (487), Expect = 2e-46
Identities = 103/330 (31%), Positives = 180/330 (54%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQRNL----FAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
+++ Y + G D A + M + F W+++I + + +R ++ LDLF +M+ G
Sbjct: 279 MIASYNQLGQTDVAMGLMKKMESLGIVPDVFTWTSLISGFAQNNRRNQALDLFKEMLLAG 338
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+ + + AC++ +L G +H+ ++K GL+ + N+++ MY+KCGEL
Sbjct: 339 VK-PNAVTITSAVSACASLKSLGKGLEIHAFSIKIGLIEDV---LVGNSLIDMYSKCGEL 394
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ + ++D +WNS+I G+CQ A LF +M+ + P+ ITW ++I+GY
Sbjct: 395 EAAQEVFDMIIEKDVFTWNSLIGGYCQAGYCGKACELFMKMQESDVAPNVITWNVMISGY 454
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + AM+L +M++ G V + +W S+++G G D+AL F +MQ V PN
Sbjct: 455 IQNGDEDEAMDLFRRMEKDGKVKRNTASWNSLVAGYLHVGEKDKALGIFRQMQSYCVIPN 514
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
+++ K +E+H + + V NSL++ YAK + ++ IFD
Sbjct: 515 LVTMLSVLPTCANLLAEKKVREIHCCILRRVLDSELPVANSLLDTYAKAGNMTYSRTIFD 574
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
ML KD+ +WNS+I GY G+ A +LF
Sbjct: 575 RMLSKDIITWNSIIAGYVLHGFSNAALDLF 604
Score = 93.2 bits (230), Expect = 2e-16
Identities = 78/357 (21%), Positives = 154/357 (43%), Gaps = 41/357 (11%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L+ MY+KCG L+ A+ VFD + ++++F W+++IG Y + + +LF M
Sbjct: 377 DVLVGNSLIDMYSKCGELEAAQEVFDMIIEKDVFTWNSLIGGYCQAGYCGKACELFMKMQ 436
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
V P ++ N ++S Y +
Sbjct: 437 ESDVA-------PNVI--------------------------------TWNVMISGYIQN 457
Query: 399 GELEMATKFF-----EGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPIT 563
G+ + A F +G KR++ SWNS++ G+ + E + A+ +F +M++ + P+ +T
Sbjct: 458 GDEDEAMDLFRRMEKDGKVKRNTASWNSLVAGYLHVGEKDKALGIFRQMQSYCVIPNLVT 517
Query: 564 W-TILITGYHQSGKPE------------------LAMELMEQMKRSGTV----------- 653
++L T + + + +A L++ ++G +
Sbjct: 518 MLSVLPTCANLLAEKKVREIHCCILRRVLDSELPVANSLLDTYAKAGNMTYSRTIFDRML 577
Query: 654 -PDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKE 830
D+ TW S+I+G +G ++ AL F +M SG+ PN + +KG+
Sbjct: 578 SKDIITWNSIIAGYVLHGFSNAALDLFDDMTKSGLKPNRGTFLSIIYSCSLSGLVDKGRL 637
Query: 831 LHSYAFKLGGSHSILVG----NSLIELYAKCDRLADAQKIFDGM-LEKDVFSWNSMI 986
S + ++I+ G ++++LY + RL +A + + M +E D W +++
Sbjct: 638 AFS---SITEDYNIVPGLEHYAAVVDLYGRPGRLGEAMEFIENMPVEPDSSVWAALL 691
Score = 77.8 bits (190), Expect = 7e-12
Identities = 69/297 (23%), Positives = 117/297 (39%), Gaps = 39/297 (13%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQ+C +T ++++GR LH A GL+ ++ ++SMYAKCG L A + F+GM
Sbjct: 77 LLQSCIDTNSIELGRKLH--ARMMGLVQYVN-PFVETKLVSMYAKCGCLHDARRVFDGMR 133
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPI-------------------- 560
+R+ +W+++I + + ++LF M +GI P
Sbjct: 134 ERNLFTWSAMIGACSREQRWKEVLKLFYLMMGDGILPDKFLLPKILEACGNCADFKTAKV 193
Query: 561 ---------------TWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
++ Y + GK A E M + D+ +W ++ISG
Sbjct: 194 IHSMVVRCGFCGSIRVINSILAVYAKCGKLNWARRFFESMDKR----DLVSWNAIISGFC 249
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
QNGR +EA F ++ G P ++
Sbjct: 250 QNGRMEEATRLFDAVREEGTEP-----------------------------------GLV 274
Query: 876 VGNSLIELYAKCDRLADAQKIFDGM----LEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
N +I Y + + A + M + DVF+W S+I G+AQ +A +LF
Sbjct: 275 TWNIMIASYNQLGQTDVAMGLMKKMESLGIVPDVFTWTSLISGFAQNNRRNQALDLF 331
Score = 68.6 bits (166), Expect = 4e-09
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = +3
Query: 27 VRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLF 206
V D ++ V L+ YAK G++ +R +FD M +++ W+++I YV + LDLF
Sbjct: 545 VLDSELPVANSLLDTYAKAGNMTYSRTIFDRMLSKDIITWNSIIAGYVLHGFSNAALDLF 604
Query: 207 FDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSM 386
DM + G+ G L I+ +CS +G +D GRL S + + Y + V+ +
Sbjct: 605 DDMTKSGLKPNRGTFL-SIIYSCSLSGLVDKGRLAFSSITEDYNIVPGLEHYAA--VVDL 661
Query: 387 YAKCGELEMATKFFEGMG-KRDSVSWNSIIT 476
Y + G L A +F E M + DS W +++T
Sbjct: 662 YGRPGRLGEAMEFIENMPVEPDSSVWAALLT 692
>gb|EMJ28416.1| hypothetical protein PRUPE_ppa019183mg [Prunus persica]
Length = 882
Score = 365 bits (936), Expect = 2e-98
Identities = 176/345 (51%), Positives = 242/345 (70%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+LH I V + + FV+TKLVSMYAKCG LDDAR+VF M +RNL+ WSAMIGA +R+ R
Sbjct: 93 KLHEHIDLVEEINPFVETKLVSMYAKCGFLDDARKVFHAMRERNLYTWSAMIGACLRDQR 152
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++LFF MM++GV +PD +L P+ILQAC N N++ +L+HS+AV+ L + +
Sbjct: 153 WKEVVELFFSMMKDGV-LPDYFLFPKILQACGNCSNIEATKLIHSIAVRCNL---TSCIH 208
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
++N++L++YAKCG LE A +FF+ M +RD VSWN+II+G+C E E A RLF M EG
Sbjct: 209 VNNSILAVYAKCGILEWARRFFDNMDERDGVSWNAIISGYCHKGESEEARRLFDAMSKEG 268
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
IEP +TW LI ++Q ++AMELM +M+ G PDV+TWTSMISG QN R ++L
Sbjct: 269 IEPGLVTWNTLIASHNQLRHCDVAMELMRRMESCGITPDVYTWTSMISGFAQNNRKHQSL 328
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
FF +M +GV PN +++ N+G E++S A K+G +LVGNSLI+++
Sbjct: 329 DFFKKMLLAGVQPNGITITSAISACTSLKSLNQGLEIYSLAIKMGFIDDVLVGNSLIDMF 388
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
+KC + AQKIF + +KDV++WNSMIGGY QA YCGKAYELF+
Sbjct: 389 SKCGEVEAAQKIFSMIPDKDVYTWNSMIGGYCQAKYCGKAYELFT 433
Score = 195 bits (496), Expect = 2e-47
Identities = 112/374 (29%), Positives = 186/374 (49%), Gaps = 40/374 (10%)
Frame = +3
Query: 33 DRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNL------------------------- 137
+RD ++S Y G ++ARR+FD M + +
Sbjct: 235 ERDGVSWNAIISGYCHKGESEEARRLFDAMSKEGIEPGLVTWNTLIASHNQLRHCDVAME 294
Query: 138 --------------FAWSAMIGAYVREHRWSEVLDLFFDMMREGVVIPDGYLLPRILQAC 275
+ W++MI + + +R + LD F M+ GV P+G + + AC
Sbjct: 295 LMRRMESCGITPDVYTWTSMISGFAQNNRKHQSLDFFKKMLLAGVQ-PNGITITSAISAC 353
Query: 276 SNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMGKRDSV 455
++ +L+ G ++SLA+K G ++ + N+++ M++KCGE+E A K F + +D
Sbjct: 354 TSLKSLNQGLEIYSLAIKMGFIDDV---LVGNSLIDMFSKCGEVEAAQKIFSMIPDKDVY 410
Query: 456 SWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAMELMEQM 635
+WNS+I G+CQ A LF +M+ + P+ +TW ++ITGY Q+G + AM+L ++M
Sbjct: 411 TWNSMIGGYCQAKYCGKAYELFTKMQESDVHPNAVTWNVMITGYMQNGDADQAMDLFQRM 470
Query: 636 KRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXX 812
++ G + + +W S++SG Q G ++A F +MQ VNPNS+++
Sbjct: 471 EKDGKIKRNTASWNSLVSGYLQLGEKNKAFGVFRQMQAYCVNPNSVTILSVLPSCANLVA 530
Query: 813 XNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGMLEKDVFSWNSMIGG 992
K KE+H + I V N+LI+ YAK +A ++ IFD M KD +WNS I G
Sbjct: 531 MKKVKEIHGSVLRRNLESEIPVANALIDTYAKSGNIAYSRIIFDTMSSKDTITWNSAISG 590
Query: 993 YAQAGYCGKAYELF 1034
Y G A +LF
Sbjct: 591 YVLHGRSDVALDLF 604
Score = 101 bits (251), Expect = 6e-19
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 10/325 (3%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L+ M++KCG ++ A+++F + ++++ W++MIG Y + + +LF M
Sbjct: 377 DVLVGNSLIDMFSKCGEVEAAQKIFSMIPDKDVYTWNSMIGGYCQAKYCGKAYELF-TKM 435
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
+E V P+ ++ G+ D L K G + + AS+ N+++S Y +
Sbjct: 436 QESDVHPNAVTWNVMITGYMQNGDADQAMDLFQRMEKDGKIKRNTASW--NSLVSGYLQL 493
Query: 399 GELEMATKFFEGMG----KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITW 566
GE A F M +SV+ S++ L + + + +E
Sbjct: 494 GEKNKAFGVFRQMQAYCVNPNSVTILSVLPSCANLVAMKKVKEIHGSVLRRNLESEIPVA 553
Query: 567 TILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQF 746
LI Y +SG + + + M T+ TW S ISG +GR+D AL F +M+
Sbjct: 554 NALIDTYAKSGNIAYSRIIFDTMSSKDTI----TWNSAISGYVLHGRSDVALDLFDQMKK 609
Query: 747 SGVNPNSMSVXXXXXXXXXXXXXNKGKE-LHSYAFKLGGSHSILVG----NSLIELYAKC 911
SG PN + ++G + HS + + I+ G +++++LY +
Sbjct: 610 SGFEPNRGTFANIIHAYSLAGKVDEGTQAFHS----ITEDYQIIPGLEHYSAMVDLYGRS 665
Query: 912 DRLADAQKIFDGM-LEKDVFSWNSM 983
RL +A + +GM +E D W ++
Sbjct: 666 GRLQEAMEFIEGMPIEPDSSVWGAL 690
Score = 67.4 bits (163), Expect = 9e-09
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 5/279 (1%)
Frame = +3
Query: 180 RWSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGAS 359
++SE + + + + G +P + +LQ+C +T ++ +GR LH +N
Sbjct: 52 QFSEAITVLDSIAQIGSKVPPTTYM-NLLQSCIDTNSIQLGRKLHEHIDLVEEIN----P 106
Query: 360 YLSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAE 539
++ ++SMYAKCG L+ A K F M +R+ +W+++I + + + LF M +
Sbjct: 107 FVETKLVSMYAKCGFLDDARKVFHAMRERNLYTWSAMIGACLRDQRWKEVVELFFSMMKD 166
Query: 540 GIEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEA 719
G+ P + ++ E + R + S+++ + G + A
Sbjct: 167 GVLPDYFLFPKILQACGNCSNIEATKLIHSIAVRCNLTSCIHVNNSILAVYAKCGILEWA 226
Query: 720 LSFFHEM-QFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIE 896
FF M + GV+ N++ + + L K G ++ N+LI
Sbjct: 227 RRFFDNMDERDGVSWNAI-----ISGYCHKGESEEARRLFDAMSKEGIEPGLVTWNTLIA 281
Query: 897 LYAK---CDRLADAQKIFDGM-LEKDVFSWNSMIGGYAQ 1001
+ + CD + + + + DV++W SMI G+AQ
Sbjct: 282 SHNQLRHCDVAMELMRRMESCGITPDVYTWTSMISGFAQ 320
Score = 65.1 bits (157), Expect = 4e-08
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Frame = +3
Query: 33 DRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFD 212
+ ++ V L+ YAK G++ +R +FD M ++ W++ I YV R LDL FD
Sbjct: 547 ESEIPVANALIDTYAKSGNIAYSRIIFDTMSSKDTITWNSAISGYVLHGRSDVALDL-FD 605
Query: 213 MMREGVVIPDGYLLPRILQACSNTGNLDVG-RLLHSLAVKTGLLNSSGASYLSNTVLSMY 389
M++ P+ I+ A S G +D G + HS+ ++ G + S ++ +Y
Sbjct: 606 QMKKSGFEPNRGTFANIIHAYSLAGKVDEGTQAFHSITEDYQII--PGLEHYS-AMVDLY 662
Query: 390 AKCGELEMATKFFEGMG-KRDSVSWNSIIT 476
+ G L+ A +F EGM + DS W ++ T
Sbjct: 663 GRSGRLQEAMEFIEGMPIEPDSSVWGALFT 692
>ref|XP_006473572.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
isoform X2 [Citrus sinensis]
Length = 1252
Score = 364 bits (934), Expect = 4e-98
Identities = 176/344 (51%), Positives = 245/344 (71%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+LHA ++ V + DVFV TKL+S+YAKCG LDDAR VF+ M +RNL+ WSAMIGAY R+ R
Sbjct: 99 KLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 158
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++LFF M+++G+ PD +L P+ILQAC N G+ + G+L+HSL +K G+ S
Sbjct: 159 WREVVELFFLMVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM---SCVRR 214
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
+ N+VL++Y KCG+L A +FFE M ++D V+WNS+I+G+ Q+ E++ A RLF +M E
Sbjct: 215 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 274
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
I+ +T+ ILI Y+Q G+ ++AME++++M+ G PDVFTWT MISG QNGRT +AL
Sbjct: 275 IKLGVVTFNILIRSYNQLGQCDVAMEMVKKMESLGITPDVFTWTCMISGFAQNGRTSQAL 334
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
F EM F GV PN +++ G E+HS A K+G + +LVGNSLI +Y
Sbjct: 335 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 394
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+KC+ L A+++FD + +KDV+SWNSMI GY QAGYCGKAYELF
Sbjct: 395 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 438
Score = 200 bits (508), Expect = 9e-49
Identities = 114/330 (34%), Positives = 180/330 (54%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQRNL----FAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L+ Y + G D A + M + F W+ MI + + R S+ LDLF +M G
Sbjct: 285 LIRSYNQLGQCDVAMEMVKKMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 344
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V+ P+G + + AC++ L +G +HSLAVK G + + N++++MY+KC EL
Sbjct: 345 VM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV---LVGNSLINMYSKCEEL 400
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ + +D SWNS+I G+CQ A LF +M+ + P+ ITW +LI+GY
Sbjct: 401 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 460
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + A++L ++M ++ V + +W S+I+G Q G+ + AL F +MQ S PN
Sbjct: 461 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 520
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
+++ NK KE+H + S+ V NSLI+ YAK + ++ IFD
Sbjct: 521 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 580
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
GM KD+ +WNS+I GY G+ A +LF
Sbjct: 581 GMSSKDIITWNSLICGYVLHGFWHAALDLF 610
Score = 82.0 bits (201), Expect = 3e-13
Identities = 67/282 (23%), Positives = 109/282 (38%), Gaps = 40/282 (14%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L++MY+KC L+ A RVFD + +++++W++MI Y + + +LF M
Sbjct: 383 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 442
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
V P ++ N ++S Y +
Sbjct: 443 ESDVP-------PNVI--------------------------------TWNVLISGYIQN 463
Query: 399 GELEMATKFFEGMGKRDSV-----SWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPIT 563
G + A F+ MGK D V SWNS+I G+ QL + A+ +F +M++ P+ +T
Sbjct: 464 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 523
Query: 564 -----------------------------------WTILITGYHQSGKPELAMELMEQMK 638
LI Y +SG + + + M
Sbjct: 524 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 583
Query: 639 RSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
D+ TW S+I G +G AL F +M+ G+ PN
Sbjct: 584 SK----DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 621
Score = 72.0 bits (175), Expect = 4e-10
Identities = 47/184 (25%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQ-----RNLFAWSAMIGAYVREHRWSEVLDLFFDMMRE 224
L+S Y + G+ D+A +F MG+ RN +W+++I Y + + + L +F M+
Sbjct: 456 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF-RKMQS 514
Query: 225 GVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGE 404
P+ + +L AC+ + + +H ++ L +S + N+++ YAK G
Sbjct: 515 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP---VMNSLIDTYAKSGN 571
Query: 405 LEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG 584
+ + F+GM +D ++WNS+I G+ A+ LF +M++ G++P+ T+ +I
Sbjct: 572 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 631
Query: 585 YHQS 596
+ S
Sbjct: 632 HSLS 635
Score = 69.7 bits (169), Expect = 2e-09
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 35/293 (11%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQAC ++ ++ + R LH+ L + ++ +LS+YAKCG L+ A + FE M
Sbjct: 84 LLQACIDSNSIHLARKLHAFL----NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 139
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILI-----TGYHQSGK- 602
+R+ +W+++I + + + LF M +G+ P + ++ G ++GK
Sbjct: 140 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 199
Query: 603 -----PELAMELMEQMKRSGTV--------------------PDVFTWTSMISGLTQNGR 707
+L M + +++ S D W SMISG Q G
Sbjct: 200 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 259
Query: 708 TDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNS 887
DEA F +M + KLG ++ N
Sbjct: 260 NDEAHRLFDKMCREEI-------------------------------KLG----VVTFNI 284
Query: 888 LIELY---AKCDRLADAQKIFDGM-LEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
LI Y +CD + K + + + DVF+W MI G+AQ G +A +LF
Sbjct: 285 LIRSYNQLGQCDVAMEMVKKMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 337
>ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citrus clementina]
gi|557537195|gb|ESR48313.1| hypothetical protein
CICLE_v10000229mg [Citrus clementina]
Length = 889
Score = 364 bits (934), Expect = 4e-98
Identities = 176/344 (51%), Positives = 245/344 (71%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+LHA ++ V + DVFV TKL+S+YAKCG LDDAR VF+ M +RNL+ WSAMIGAY R+ R
Sbjct: 99 KLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 158
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++LFF M+++G+ PD +L P+ILQAC N G+ + G+L+HSL +K G+ S
Sbjct: 159 WREVVELFFLMVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM---SCVRR 214
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
+ N+VL++Y KCG+L A +FFE M ++D V+WNS+I+G+ Q+ E++ A RLF +M E
Sbjct: 215 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 274
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
I+ +T+ ILI Y+Q G+ ++AME++++M+ G PDVFTWT MISG QNGRT +AL
Sbjct: 275 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 334
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
F EM F GV PN +++ G E+HS A K+G + +LVGNSLI +Y
Sbjct: 335 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 394
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+KC+ L A+++FD + +KDV+SWNSMI GY QAGYCGKAYELF
Sbjct: 395 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 438
Score = 197 bits (500), Expect = 7e-48
Identities = 113/330 (34%), Positives = 179/330 (54%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQRNL----FAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L+ Y + G D A + M + F W+ MI + + R S+ LDLF +M G
Sbjct: 285 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 344
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V+ P+G + + AC++ L +G +HSLAVK G + + N++++MY+KC EL
Sbjct: 345 VM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV---LVGNSLINMYSKCEEL 400
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ + +D SWNS+I G+CQ A LF +M+ + P+ ITW +LI+GY
Sbjct: 401 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 460
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + A++L ++M ++ V + +W S+I+G Q G+ + AL F +MQ S PN
Sbjct: 461 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 520
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
+++ NK KE+H + S+ V NSLI+ YAK + ++ IFD
Sbjct: 521 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 580
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
M KD+ +WNS+I GY G+ A +LF
Sbjct: 581 EMSSKDIITWNSLICGYVLHGFWHAALDLF 610
Score = 89.0 bits (219), Expect = 3e-15
Identities = 79/361 (21%), Positives = 142/361 (39%), Gaps = 45/361 (12%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L++MY+KC L+ A RVFD + +++++W++MI Y + + +LF M
Sbjct: 383 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 442
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
V P ++ N ++S Y +
Sbjct: 443 ESDVP-------PNVI--------------------------------TWNVLISGYIQN 463
Query: 399 GELEMATKFFEGMGKRDSV-----SWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPIT 563
G + A F+ MGK D V SWNS+I G+ QL + A+ +F +M++ P+ +T
Sbjct: 464 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 523
Query: 564 -----------------------------------WTILITGYHQSGKPELAMELMEQMK 638
LI Y +SG + + ++M
Sbjct: 524 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDEMS 583
Query: 639 RSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXN 818
D+ TW S+I G +G AL F +M+ G+ PN + +
Sbjct: 584 SK----DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 639
Query: 819 KGKELHSYAFKLGGSHSILV----GNSLIELYAKCDRLADAQKIFDGM-LEKDVFSWNSM 983
GK++ + + I+ +++I+LY + +L +A + + M +E D W ++
Sbjct: 640 LGKQVFC---SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 696
Query: 984 I 986
+
Sbjct: 697 L 697
Score = 69.7 bits (169), Expect = 2e-09
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 35/293 (11%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQAC ++ ++ + R LH+ L + ++ +LS+YAKCG L+ A + FE M
Sbjct: 84 LLQACIDSNSIHLARKLHAFL----NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 139
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILI-----TGYHQSGK- 602
+R+ +W+++I + + + LF M +G+ P + ++ G ++GK
Sbjct: 140 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 199
Query: 603 -----PELAMELMEQMKRSGTV--------------------PDVFTWTSMISGLTQNGR 707
+L M + +++ S D W SMISG Q G
Sbjct: 200 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 259
Query: 708 TDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNS 887
DEA F +M + KLG ++ N
Sbjct: 260 NDEAHRLFDKMCREEI-------------------------------KLG----VVTFNI 284
Query: 888 LIELY---AKCDRLADAQKIFDGM-LEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
LI Y +CD + K + + + DVF+W MI G+AQ G +A +LF
Sbjct: 285 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 337
>ref|XP_004301846.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Fragaria vesca subsp. vesca]
Length = 892
Score = 363 bits (933), Expect = 5e-98
Identities = 177/344 (51%), Positives = 249/344 (72%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+LH I +V D FV+TKLVSMYAKCG L+DAR+VFD M +RNL+ WSAMIGA +RE R
Sbjct: 95 KLHRVIHAVDDVTPFVETKLVSMYAKCGCLEDARKVFDEMRERNLYTWSAMIGACLRERR 154
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++LF M+R+GV +PD +L+P++LQAC N G+ R++HS+ V++GL+ G
Sbjct: 155 WGEVVELFALMVRDGV-LPDWFLVPKVLQACGNCGDFAAARMVHSMVVRSGLI---GNLR 210
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
+SN +L++YAKCGELE A +FF+ M RD VSWNSI++G+CQ ++ A RL M +G
Sbjct: 211 VSNALLAVYAKCGELESARRFFDKMEVRDGVSWNSIVSGYCQNGDNVEARRLIDEMIRQG 270
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
IEP +TW ILI+ ++SG+ ++AMELM++M+ G +PDV+TWT+MISG QN RT++AL
Sbjct: 271 IEPGLVTWNILISSCNKSGQCDVAMELMKKMESCGIIPDVYTWTAMISGFAQNNRTNQAL 330
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
+ +M GV PN +++ KG E++++A K+G + +LVGNSLI+++
Sbjct: 331 DLWKKMILLGVLPNGITIASAILACTSLKSLTKGLEVYAFAVKIGLTDDVLVGNSLIDMF 390
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+KC L A+++F+ M EKDV+SWNSMIGGY QA YCGKAYELF
Sbjct: 391 SKCGDLEAAEQVFNVMSEKDVYSWNSMIGGYCQARYCGKAYELF 434
Score = 201 bits (510), Expect = 5e-49
Identities = 113/330 (34%), Positives = 183/330 (55%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVFDGMGQ----RNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L+S K G D A + M +++ W+AMI + + +R ++ LDL+ M+ G
Sbjct: 281 LISSCNKSGQCDVAMELMKKMESCGIIPDVYTWTAMISGFAQNNRTNQALDLWKKMILLG 340
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V +P+G + + AC++ +L G +++ AVK GL + + N+++ M++KCG+L
Sbjct: 341 V-LPNGITIASAILACTSLKSLTKGLEVYAFAVKIGLTDDV---LVGNSLIDMFSKCGDL 396
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F M ++D SWNS+I G+CQ A LF +M+ + P+ IT+ ++ITGY
Sbjct: 397 EAAEQVFNVMSEKDVYSWNSMIGGYCQARYCGKAYELFMKMQESDVRPNAITYNVMITGY 456
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + AM+L + M+R G V + +W S+I+G Q G +EAL F +MQ GV+PN
Sbjct: 457 IQNGDADQAMDLFQMMERDGKVKRNTASWNSLIAGYAQLGEINEALRIFRKMQTFGVSPN 516
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
++++ K KE+H F+ + V NSLI+ YAK + ++ IFD
Sbjct: 517 AVTLLSILPACASLAAMKKVKEIHGSVFRRNLEFELPVANSLIDTYAKSGNIEYSRTIFD 576
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
M KD+ +WNS I GY G+ A +LF
Sbjct: 577 RMASKDIITWNSAISGYVLHGHPDVALDLF 606
Score = 109 bits (272), Expect = 2e-21
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L+ M++KCG L+ A +VF+ M ++++++W++MIG Y + + +LF M
Sbjct: 379 DVLVGNSLIDMFSKCGDLEAAEQVFNVMSEKDVYSWNSMIGGYCQARYCGKAYELFM-KM 437
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
+E V P+ ++ G+ D L + + G + + AS+ N++++ YA+
Sbjct: 438 QESDVRPNAITYNVMITGYIQNGDADQAMDLFQMMERDGKVKRNTASW--NSLIAGYAQL 495
Query: 399 GELEMATKFFEGMG----KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITW 566
GE+ A + F M ++V+ SI+ L+ + + + +E
Sbjct: 496 GEINEALRIFRKMQTFGVSPNAVTLLSILPACASLAAMKKVKEIHGSVFRRNLEFELPVA 555
Query: 567 TILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQF 746
LI Y +SG E + + ++M D+ TW S ISG +G D AL F M+
Sbjct: 556 NSLIDTYAKSGNIEYSRTIFDRMASK----DIITWNSAISGYVLHGHPDVALDLFDRMKQ 611
Query: 747 SGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVG----NSLIELYAKCD 914
G+ PN + N+G E S + + I+ G +++++LY +
Sbjct: 612 LGLKPNRGTFAAVLYAYSLAKMVNEGIEALS---SISEEYQIIPGPEHYSAIVDLYGRSG 668
Query: 915 RLADAQKIFDGM-LEKDVFSWNSMI 986
RL +A + + M +E D W +++
Sbjct: 669 RLQEAVEFIEDMPIEPDSSVWAALL 693
Score = 72.4 bits (176), Expect = 3e-10
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 5/263 (1%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQ+C ++ ++ +GR LH + ++ ++SMYAKCG LE A K F+ M
Sbjct: 80 LLQSCIDSNSIHLGRKLHRVIHAV----DDVTPFVETKLVSMYAKCGCLEDARKVFDEMR 135
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAME 620
+R+ +W+++I + + LFA M +G+ P ++ G A
Sbjct: 136 ERNLYTWSAMIGACLRERRWGEVVELFALMVRDGVLPDWFLVPKVLQACGNCGDFAAARM 195
Query: 621 LMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQF-SGVNPNSMSVXXXXXXX 797
+ + RSG + ++ ++++ + G + A FF +M+ GV+ NS+
Sbjct: 196 VHSMVVRSGLIGNLRVSNALLAVYAKCGELESARRFFDKMEVRDGVSWNSI-----VSGY 250
Query: 798 XXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAK---CDRLADAQKIFDGM-LEKDV 965
+ + L + G ++ N LI K CD + K + + DV
Sbjct: 251 CQNGDNVEARRLIDEMIRQGIEPGLVTWNILISSCNKSGQCDVAMELMKKMESCGIIPDV 310
Query: 966 FSWNSMIGGYAQAGYCGKAYELF 1034
++W +MI G+AQ +A +L+
Sbjct: 311 YTWTAMISGFAQNNRTNQALDLW 333
>ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Glycine max]
Length = 896
Score = 361 bits (927), Expect = 2e-97
Identities = 178/343 (51%), Positives = 238/343 (69%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LH I VR + FV+TKLVSMYAKCG LD+AR+VFD M +RNLF WSAMIGA R+ +W
Sbjct: 106 LHTRIGLVRKVNPFVETKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKW 165
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV++LF+DMM+ GV +PD +LLP++L+AC +++ GRL+HSL ++ G+ +S ++
Sbjct: 166 EEVVELFYDMMQHGV-LPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSL---HV 221
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
+N++L++YAKCGE+ A K F M +R+ VSWN IITG+CQ E E A + F M+ EG+
Sbjct: 222 NNSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGM 281
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
EP +TW ILI Y Q G ++AM+LM +M+ G PDV+TWTSMISG TQ GR +EA
Sbjct: 282 EPGLVTWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFD 341
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
+M GV PNS+++ + G E+HS A K IL+GNSLI++YA
Sbjct: 342 LLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYA 401
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
K L AQ IFD MLE+DV+SWNS+IGGY QAG+CGKA+ELF
Sbjct: 402 KGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELF 444
Score = 205 bits (521), Expect = 3e-50
Identities = 113/330 (34%), Positives = 185/330 (56%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLD---DARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y++ G D D R + G +++ W++MI + ++ R +E DL DM+ G
Sbjct: 291 LIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVG 350
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+ + AC++ +L +G +HS+AVKT +++ + N+++ MYAK G+L
Sbjct: 351 VE-PNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDI---LIGNSLIDMYAKGGDL 406
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A F+ M +RD SWNSII G+CQ A LF +M+ P+ +TW ++ITG+
Sbjct: 407 EAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGF 466
Query: 588 HQSGKPELAMELMEQMKRSGTV-PDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + A+ L ++++ G + P+V +W S+ISG QN + D+AL F +MQFS + PN
Sbjct: 467 MQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPN 526
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
++V K KE+H A + + V N+ I+ YAK + ++K+FD
Sbjct: 527 LVTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFD 586
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
G+ KD+ SWNS++ GY G A +LF
Sbjct: 587 GLSPKDIISWNSLLSGYVLHGCSESALDLF 616
Score = 99.8 bits (247), Expect = 2e-18
Identities = 91/382 (23%), Positives = 163/382 (42%), Gaps = 72/382 (18%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYV------REHR------ 182
D+ + L+ MYAK G L+ A+ +FD M +R++++W+++IG Y + H
Sbjct: 389 DILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQ 448
Query: 183 ----------WS-------------EVLDLFFDMMREGVVIPD---------GYLLPR-- 260
W+ E L+LF + ++G + P+ G+L R
Sbjct: 449 ESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQK 508
Query: 261 ------------------------ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLS 368
IL AC+N + +H A + L++ +S
Sbjct: 509 DKALQIFRQMQFSNMAPNLVTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELS---VS 565
Query: 369 NTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIE 548
NT + YAK G + + K F+G+ +D +SWNS+++G+ E A+ LF +MR +G+
Sbjct: 566 NTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLH 625
Query: 549 PSPITWTILITGYHQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALS 725
PS +T T +I+ Y + + + + D+ +++M+ L ++G+ +AL
Sbjct: 626 PSRVTLTSIISAYSHAEMVDEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALE 685
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLG-GSHSILVGNSLIELY 902
F M V PNS N G + + L +I+ + L + Y
Sbjct: 686 FIQNMP---VEPNSS--VWAALLTACRIHKNFGMAIFAGEHMLELDPENIITQHLLSQAY 740
Query: 903 AKCDRLADAQKIFDGMLEKDVF 968
+ C + +AQK+ LEK+ F
Sbjct: 741 SVCGKSWEAQKM--TKLEKEKF 760
Score = 74.3 bits (181), Expect = 7e-11
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 39/296 (13%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQAC + + VGR LH+ + GL+ ++ ++SMYAKCG L+ A K F+ M
Sbjct: 90 LLQACIDKDCILVGRELHT---RIGLVRKVN-PFVETKLVSMYAKCGHLDEARKVFDEMR 145
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG--------------------IEPSPI 560
+R+ +W+++I + + E + LF M G IE +
Sbjct: 146 ERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRL 205
Query: 561 TWTILITG---------------YHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
+++I G Y + G+ A ++ +M V +W +I+G
Sbjct: 206 IHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERNCV----SWNVIITGYC 261
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
Q G ++A +F MQ G+ P ++
Sbjct: 262 QRGEIEQAQKYFDAMQEEGMEP-----------------------------------GLV 286
Query: 876 VGNSLIELYAK---CDRLADAQKIFDGM-LEKDVFSWNSMIGGYAQAGYCGKAYEL 1031
N LI Y++ CD D + + + DV++W SMI G+ Q G +A++L
Sbjct: 287 TWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDL 342
>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344175|gb|ERP63997.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 810
Score = 355 bits (911), Expect = 2e-95
Identities = 174/345 (50%), Positives = 240/345 (69%)
Frame = +3
Query: 3 RLHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHR 182
+ HA IS V+++ ++TKLVSMYAKCG L DAR+VFD M +R+LF WSAMIGA RE R
Sbjct: 18 KFHARISVVQEKSPVIETKLVSMYAKCGYLRDARKVFDEMSERSLFTWSAMIGACCREKR 77
Query: 183 WSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASY 362
W EV++L++ MM++ V +PDG+LLP+ILQA N ++ G LLHS V+ G+ +S
Sbjct: 78 WKEVVELYYMMMKDNV-LPDGFLLPKILQAVGNCRDVKTGELLHSFVVRCGMGSSPR--- 133
Query: 363 LSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEG 542
++N++L++Y+KCG+L +A +FFE M +RD V+WN++++G+C E E A RLF M EG
Sbjct: 134 VNNSILAVYSKCGKLSLARRFFESMDERDIVAWNAMMSGYCLKGEVEEAHRLFDAMCEEG 193
Query: 543 IEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEAL 722
IEP +TW ILI GY+Q G+ ++AM LM++M G PDV WTSMISG QN R +AL
Sbjct: 194 IEPGLVTWNILIAGYNQKGQCDVAMNLMKKMVSFGVSPDVVAWTSMISGFAQNNRNGQAL 253
Query: 723 SFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY 902
+ EM +GV PN +++ N G +HS A K+ + +LVGNSLI++Y
Sbjct: 254 DLYKEMILAGVEPNGVTITSALSACASLKVLNTGLGIHSLAVKMSFVNDVLVGNSLIDMY 313
Query: 903 AKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELFS 1037
+KC +L AQ +FD M EKD+++WNSMIGGY QAGYCGKAY LF+
Sbjct: 314 SKCGQLGAAQLVFDLMSEKDLYTWNSMIGGYCQAGYCGKAYVLFT 358
Score = 182 bits (462), Expect = 2e-43
Identities = 111/376 (29%), Positives = 186/376 (49%), Gaps = 40/376 (10%)
Frame = +3
Query: 24 SVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNL---------------------- 137
S+ +RD+ ++S Y G +++A R+FD M + +
Sbjct: 157 SMDERDIVAWNAMMSGYCLKGEVEEAHRLFDAMCEEGIEPGLVTWNILIAGYNQKGQCDV 216
Query: 138 -----------------FAWSAMIGAYVREHRWSEVLDLFFDMMREGVVIPDGYLLPRIL 266
AW++MI + + +R + LDL+ +M+ GV P+G + L
Sbjct: 217 AMNLMKKMVSFGVSPDVVAWTSMISGFAQNNRNGQALDLYKEMILAGVE-PNGVTITSAL 275
Query: 267 QACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMGKR 446
AC++ L+ G +HSLAVK +N + N+++ MY+KCG+L A F+ M ++
Sbjct: 276 SACASLKVLNTGLGIHSLAVKMSFVNDV---LVGNSLIDMYSKCGQLGAAQLVFDLMSEK 332
Query: 447 DSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAMELM 626
D +WNS+I G+CQ A LF +M+ ++P+ +TW +I+GY QSG + AM+L
Sbjct: 333 DLYTWNSMIGGYCQAGYCGKAYVLFTKMQKSQVQPNVVTWNTMISGYIQSGDEDQAMDLF 392
Query: 627 EQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXX 803
+M++ G + D +W S+I+G Q + D+AL F +MQ ++PN +++
Sbjct: 393 HRMEKEGEIKRDNASWNSLIAGFMQIRKKDKALGIFRQMQSFCISPNPVTILSMLPACAS 452
Query: 804 XXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGMLEKDVFSWNSM 983
K KE+H + + + NSLI+ YAK ++ ++ IFD + KD + NSM
Sbjct: 453 LVALKKVKEIHGCVLRRNLVSVLSISNSLIDTYAKSGKIEYSRAIFDRIPSKDFITVNSM 512
Query: 984 IGGYAQAGYCGKAYEL 1031
I GY G A L
Sbjct: 513 ITGYVLHGCSDSALGL 528
Score = 97.4 bits (241), Expect = 8e-18
Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 44/348 (12%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
DV V L+ MY+KCG L A+ VFD M +++L+ W++MIG Y + + LF M
Sbjct: 302 DVLVGNSLIDMYSKCGQLGAAQLVFDLMSEKDLYTWNSMIGGYCQAGYCGKAYVLFTKMQ 361
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
+ V P ++ NT++S Y +
Sbjct: 362 KSQV-------QPNVV--------------------------------TWNTMISGYIQS 382
Query: 399 GELEMATKFF-----EGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPIT 563
G+ + A F EG KRD+ SWNS+I G Q+ + + A+ +F +M++ I P+P+T
Sbjct: 383 GDEDQAMDLFHRMEKEGEIKRDNASWNSLIAGFMQIRKKDKALGIFRQMQSFCISPNPVT 442
Query: 564 -----------------------------------WTILITGYHQSGKPELAMELMEQMK 638
LI Y +SGK E + + +++
Sbjct: 443 ILSMLPACASLVALKKVKEIHGCVLRRNLVSVLSISNSLIDTYAKSGKIEYSRAIFDRIP 502
Query: 639 RSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXN 818
D T SMI+G +G +D AL +M+ G+ PN ++ +
Sbjct: 503 SK----DFITVNSMITGYVLHGCSDSALGLLDQMRELGLKPNRGTLVNIILAHSLAGMVD 558
Query: 819 KGKELHSYAFKLGGSHSILVGN----SLIELYAKCDRLADAQKIFDGM 950
+G+++ S + I+ + ++++LY + RL +A ++ D M
Sbjct: 559 EGRQVFS---SMTEDFQIIPASEHYAAMVDLYGRSGRLKEAIELIDNM 603
>ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
isoform X1 [Glycine max] gi|571441335|ref|XP_006575413.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like isoform X2 [Glycine max]
Length = 896
Score = 352 bits (902), Expect = 2e-94
Identities = 173/343 (50%), Positives = 237/343 (69%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LHA I V + FV+TKLVSMYAKCG LD+A +VFD M +RNLF WSAMIGA R+ +W
Sbjct: 106 LHARIGLVGKVNPFVETKLVSMYAKCGHLDEAWKVFDEMRERNLFTWSAMIGACSRDLKW 165
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV+ LF+DMM+ GV +PD +LLP++L+AC +++ GRL+HS+A++ G+ +S ++
Sbjct: 166 EEVVKLFYDMMQHGV-LPDEFLLPKVLKACGKCRDIETGRLIHSVAIRGGMCSSL---HV 221
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
+N++L++YAKCGE+ A KFF M +R+ +SWN IITG+CQ E E A + F MR EG+
Sbjct: 222 NNSILAVYAKCGEMSCAEKFFRRMDERNCISWNVIITGYCQRGEIEQAQKYFDAMREEGM 281
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
+P +TW ILI Y Q G ++AM+L+ +M+ G PDV+TWTSMISG +Q GR +EA
Sbjct: 282 KPGLVTWNILIASYSQLGHCDIAMDLIRKMESFGITPDVYTWTSMISGFSQKGRINEAFD 341
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
+M GV PNS+++ + G E+HS A K IL+ NSLI++YA
Sbjct: 342 LLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSLVGDILIANSLIDMYA 401
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
K L AQ IFD ML++DV+SWNS+IGGY QAG+CGKA+ELF
Sbjct: 402 KGGNLEAAQSIFDVMLQRDVYSWNSIIGGYCQAGFCGKAHELF 444
Score = 206 bits (524), Expect = 1e-50
Identities = 115/330 (34%), Positives = 184/330 (55%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLD---DARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y++ G D D R + G +++ W++MI + ++ R +E DL DM+ G
Sbjct: 291 LIASYSQLGHCDIAMDLIRKMESFGITPDVYTWTSMISGFSQKGRINEAFDLLRDMLIVG 350
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+ + AC++ +L +G +HS+AVKT L+ G ++N+++ MYAK G L
Sbjct: 351 VE-PNSITIASAASACASVKSLSMGSEIHSIAVKTSLV---GDILIANSLIDMYAKGGNL 406
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A F+ M +RD SWNSII G+CQ A LF +M+ P+ +TW ++ITG+
Sbjct: 407 EAAQSIFDVMLQRDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGF 466
Query: 588 HQSGKPELAMELMEQMKRSGTV-PDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + A+ L ++++ G + P+V +W S+ISG QN + D+AL F MQFS + PN
Sbjct: 467 MQNGDEDEALNLFQRIENDGKIKPNVASWNSLISGFLQNRQKDKALQIFRRMQFSNMAPN 526
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
++V K KE+H A + + V N+ I+ YAK + ++K+FD
Sbjct: 527 LVTVLTILPACTNLVAAKKVKEIHCCAIRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFD 586
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
G+ KD+ SWNS++ GY G A +LF
Sbjct: 587 GLSPKDIISWNSLLSGYVLHGCSESALDLF 616
Score = 98.2 bits (243), Expect = 5e-18
Identities = 62/242 (25%), Positives = 124/242 (51%), Gaps = 6/242 (2%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVF-----DGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMMRE 224
+++ + + G D+A +F DG + N+ +W+++I +++ + + L +F M
Sbjct: 462 MITGFMQNGDEDEALNLFQRIENDGKIKPNVASWNSLISGFLQNRQKDKALQIFRRMQFS 521
Query: 225 GVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGE 404
+ P+ + IL AC+N + +H A++ L++ +SNT + YAK G
Sbjct: 522 NMA-PNLVTVLTILPACTNLVAAKKVKEIHCCAIRRNLVSELS---VSNTFIDSYAKSGN 577
Query: 405 LEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG 584
+ + K F+G+ +D +SWNS+++G+ E A+ LF +MR +G+ P+ +T T +I+
Sbjct: 578 IMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGVHPNRVTLTSIISA 637
Query: 585 YHQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNP 761
Y +G + + + D+ +++M+ L ++G+ +AL F M V P
Sbjct: 638 YSHAGMVDEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMP---VEP 694
Query: 762 NS 767
NS
Sbjct: 695 NS 696
Score = 73.9 bits (180), Expect = 9e-11
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 4/261 (1%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQAC + + VGR LH+ G +N ++ ++SMYAKCG L+ A K F+ M
Sbjct: 90 LLQACIDKDCILVGRELHARIGLVGKVN----PFVETKLVSMYAKCGHLDEAWKVFDEMR 145
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAME 620
+R+ +W+++I + + E ++LF M G+ P ++ + E
Sbjct: 146 ERNLFTWSAMIGACSRDLKWEEVVKLFYDMMQHGVLPDEFLLPKVLKACGKCRDIETGRL 205
Query: 621 LMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXX 800
+ R G + S+++ + G A FF M N +S
Sbjct: 206 IHSVAIRGGMCSSLHVNNSILAVYAKCGEMSCAEKFFRRMD----ERNCISWNVIITGYC 261
Query: 801 XXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAK---CDRLAD-AQKIFDGMLEKDVF 968
+ ++ + G ++ N LI Y++ CD D +K+ + DV+
Sbjct: 262 QRGEIEQAQKYFDAMREEGMKPGLVTWNILIASYSQLGHCDIAMDLIRKMESFGITPDVY 321
Query: 969 SWNSMIGGYAQAGYCGKAYEL 1031
+W SMI G++Q G +A++L
Sbjct: 322 TWTSMISGFSQKGRINEAFDL 342
Score = 69.7 bits (169), Expect = 2e-09
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
++ V + YAK G++ +R+VFDG+ +++ +W++++ YV LDL FD M
Sbjct: 561 ELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALDL-FDQM 619
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
R+ V P+ L I+ A S+ G +D G+ S + + Y + ++ + +
Sbjct: 620 RKDGVHPNRVTLTSIISAYSHAGMVDEGKHAFSNISEEYQIRLDLEHY--SAMVYLLGRS 677
Query: 399 GELEMATKFFEGMG-KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEP-SPITWTI 572
G+L A +F + M + +S W +++T C++ ++ M +FA R ++P + IT +
Sbjct: 678 GKLAKALEFIQNMPVEPNSSVWAALMTA-CRIHKN-FGMAIFAGERMHELDPENIITQHL 735
Query: 573 LITGYHQSGKPELAMELME-QMKRSGTVPDVFTWTSM 680
L Y GK A ++ + + ++ +P +W M
Sbjct: 736 LSQAYSVCGKSLEAPKMTKLEKEKFVNIPVGQSWIEM 772
>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 350 bits (897), Expect = 7e-94
Identities = 172/343 (50%), Positives = 234/343 (68%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LH + V + FV+TKLVSMYAKCG L DAR+VFDGM +RNL+ WSAMIGAY RE RW
Sbjct: 102 LHVRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRW 161
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV++LFF MM +GV +PD +L P+ILQAC N +L+ +L+HSL ++ GL S L
Sbjct: 162 KEVVELFFLMMGDGV-LPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGL---SCYMRL 217
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
SN++L+ + KCG+L +A KFF M +RD VSWN +I G+CQ + A RL M +G
Sbjct: 218 SNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGF 277
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
+P +T+ I+I Y Q G +L ++L ++M+ G PDV+TWTSMISG +Q+ R +AL
Sbjct: 278 KPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALD 337
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
FF +M +GV PN++++ G E+H +A K+G + LVGNSLI++Y+
Sbjct: 338 FFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYS 397
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
KC +L A+ +FD +LEKDV++WNSMIGGY QAGY GKAYELF
Sbjct: 398 KCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELF 440
Score = 187 bits (475), Expect = 6e-45
Identities = 101/330 (30%), Positives = 180/330 (54%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLD---DARRVFDGMGQR-NLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
+++ Y++ G D D ++ + +G +++ W++MI + + R S+ LD F M+ G
Sbjct: 287 MIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAG 346
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+ + AC++ +L G +H A+K G+ + + N+++ MY+KCG+L
Sbjct: 347 VE-PNTITIASATSACASLKSLQNGLEIHCFAIKMGIARET---LVGNSLIDMYSKCGKL 402
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A F+ + ++D +WNS+I G+CQ A LF R+R + P+ +TW +I+G
Sbjct: 403 EAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGC 462
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + AM+L + M++ G V + +W S+I+G Q G ++AL+ F +MQ +PN
Sbjct: 463 IQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPN 522
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ K KE+H + + V NSL++ YAK + ++ +F+
Sbjct: 523 SVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFN 582
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
GM KD+ +WNS+I GY G A++LF
Sbjct: 583 GMSSKDIITWNSIIAGYILHGCSDSAFQLF 612
Score = 114 bits (286), Expect = 5e-23
Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 9/326 (2%)
Frame = +3
Query: 36 RDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDM 215
R+ V L+ MY+KCG L+ AR VFD + +++++ W++MIG Y + + +LF
Sbjct: 384 RETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFM-R 442
Query: 216 MREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAK 395
+RE V+P+ ++ C G+ D L + K G + + AS+ N++++ Y +
Sbjct: 443 LRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASW--NSLIAGYHQ 500
Query: 396 CGELEMATKFFEGMG----KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPIT 563
GE A F M +SV+ SI+ + + + + +E
Sbjct: 501 LGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAV 560
Query: 564 WTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQ 743
L+ Y +SG + + + M D+ TW S+I+G +G +D A F +M+
Sbjct: 561 ANSLVDTYAKSGNIKYSRTVFNGMSSK----DIITWNSIIAGYILHGCSDSAFQLFDQMR 616
Query: 744 FSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVG----NSLIELYAKC 911
G+ PN ++ +KG+ + S + H IL ++++LY +
Sbjct: 617 NLGIRPNRGTLASIIHAYGIAGMVDKGRHVFS---SITEEHQILPTLDHYLAMVDLYGRS 673
Query: 912 DRLADAQKIFDGM-LEKDVFSWNSMI 986
RLADA + + M +E DV W S++
Sbjct: 674 GRLADAIEFIEDMPIEPDVSIWTSLL 699
Score = 84.7 bits (208), Expect = 5e-14
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 5/263 (1%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQ C + G++++GR LH V+ GL++ ++ ++SMYAKCG L+ A K F+GM
Sbjct: 86 LLQTCIDVGSIELGRELH---VRMGLVHRVN-PFVETKLVSMYAKCGCLKDARKVFDGMQ 141
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAME 620
+R+ +W+++I + + + + LF M +G+ P + ++ E
Sbjct: 142 ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKL 201
Query: 621 LMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEM-QFSGVNPNSMSVXXXXXXX 797
+ + R G + S+++ + G+ A FF M + GV+ N M
Sbjct: 202 IHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVM-----IAGY 256
Query: 798 XXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAK---CDRLADAQKIFDGM-LEKDV 965
++ + L G ++ N +I Y++ CD + D +K + + L DV
Sbjct: 257 CQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDV 316
Query: 966 FSWNSMIGGYAQAGYCGKAYELF 1034
++W SMI G++Q+ +A + F
Sbjct: 317 YTWTSMISGFSQSSRISQALDFF 339
Score = 73.6 bits (179), Expect = 1e-10
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Frame = +3
Query: 33 DRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFD 212
+ ++ V LV YAK G++ +R VF+GM +++ W+++I Y+ H S+ FD
Sbjct: 555 ESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYIL-HGCSDSAFQLFD 613
Query: 213 MMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYA 392
MR + P+ L I+ A G +D GR + S + + + YL+ ++ +Y
Sbjct: 614 QMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLA--MVDLYG 671
Query: 393 KCGELEMATKFFEGMGKRDSVS-WNSIITGHCQLSEHEVAMRLFARMRAEGIEP-SPITW 566
+ G L A +F E M VS W S++T C+ + + + A R +EP + + +
Sbjct: 672 RSGRLADAIEFIEDMPIEPDVSIWTSLLTA-CRF-HGNLNLAVLAAKRLHELEPDNHVIY 729
Query: 567 TILITGYHQSGKPELAMELMEQMKRS 644
+L+ Y GK E +++ + K S
Sbjct: 730 RLLVQAYALYGKFEQTLKVRKLGKES 755
>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Cucumis sativus]
Length = 1463
Score = 350 bits (897), Expect = 7e-94
Identities = 172/343 (50%), Positives = 234/343 (68%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LH + V + FV+TKLVSMYAKCG L DAR+VFDGM +RNL+ WSAMIGAY RE RW
Sbjct: 102 LHVRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRW 161
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV++LFF MM +GV +PD +L P+ILQAC N +L+ +L+HSL ++ GL S L
Sbjct: 162 KEVVELFFLMMGDGV-LPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGL---SCYMRL 217
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
SN++L+ + KCG+L +A KFF M +RD VSWN +I G+CQ + A RL M +G
Sbjct: 218 SNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGF 277
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
+P +T+ I+I Y Q G +L ++L ++M+ G PDV+TWTSMISG +Q+ R +AL
Sbjct: 278 KPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALD 337
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
FF +M +GV PN++++ G E+H +A K+G + LVGNSLI++Y+
Sbjct: 338 FFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYS 397
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
KC +L A+ +FD +LEKDV++WNSMIGGY QAGY GKAYELF
Sbjct: 398 KCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELF 440
Score = 187 bits (475), Expect = 6e-45
Identities = 101/330 (30%), Positives = 180/330 (54%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLD---DARRVFDGMGQR-NLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
+++ Y++ G D D ++ + +G +++ W++MI + + R S+ LD F M+ G
Sbjct: 287 MIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAG 346
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+ + AC++ +L G +H A+K G+ + + N+++ MY+KCG+L
Sbjct: 347 VE-PNTITIASATSACASLKSLQNGLEIHCFAIKMGIARET---LVGNSLIDMYSKCGKL 402
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A F+ + ++D +WNS+I G+CQ A LF R+R + P+ +TW +I+G
Sbjct: 403 EAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGC 462
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + AM+L + M++ G V + +W S+I+G Q G ++AL+ F +MQ +PN
Sbjct: 463 IQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPN 522
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ K KE+H + + V NSL++ YAK + ++ +F+
Sbjct: 523 SVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFN 582
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
GM KD+ +WNS+I GY G A++LF
Sbjct: 583 GMSSKDIITWNSIIAGYILHGCSDSAFQLF 612
Score = 114 bits (286), Expect = 5e-23
Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 9/326 (2%)
Frame = +3
Query: 36 RDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDM 215
R+ V L+ MY+KCG L+ AR VFD + +++++ W++MIG Y + + +LF
Sbjct: 384 RETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFM-R 442
Query: 216 MREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAK 395
+RE V+P+ ++ C G+ D L + K G + + AS+ N++++ Y +
Sbjct: 443 LRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASW--NSLIAGYHQ 500
Query: 396 CGELEMATKFFEGMG----KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPIT 563
GE A F M +SV+ SI+ + + + + +E
Sbjct: 501 LGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAV 560
Query: 564 WTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQ 743
L+ Y +SG + + + M D+ TW S+I+G +G +D A F +M+
Sbjct: 561 ANSLVDTYAKSGNIKYSRTVFNGMSSK----DIITWNSIIAGYILHGCSDSAFQLFDQMR 616
Query: 744 FSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVG----NSLIELYAKC 911
G+ PN ++ +KG+ + S + H IL ++++LY +
Sbjct: 617 NLGIRPNRGTLASIIHAYGIAGMVDKGRHVFS---SITEEHQILPTLDHYLAMVDLYGRS 673
Query: 912 DRLADAQKIFDGM-LEKDVFSWNSMI 986
RLADA + + M +E DV W S++
Sbjct: 674 GRLADAIEFIEDMPIEPDVSIWTSLL 699
Score = 84.7 bits (208), Expect = 5e-14
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 5/263 (1%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQ C + G++++GR LH V+ GL++ ++ ++SMYAKCG L+ A K F+GM
Sbjct: 86 LLQTCIDVGSIELGRELH---VRMGLVHRVN-PFVETKLVSMYAKCGCLKDARKVFDGMQ 141
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAME 620
+R+ +W+++I + + + + LF M +G+ P + ++ E
Sbjct: 142 ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKL 201
Query: 621 LMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEM-QFSGVNPNSMSVXXXXXXX 797
+ + R G + S+++ + G+ A FF M + GV+ N M
Sbjct: 202 IHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVM-----IAGY 256
Query: 798 XXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAK---CDRLADAQKIFDGM-LEKDV 965
++ + L G ++ N +I Y++ CD + D +K + + L DV
Sbjct: 257 CQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDV 316
Query: 966 FSWNSMIGGYAQAGYCGKAYELF 1034
++W SMI G++Q+ +A + F
Sbjct: 317 YTWTSMISGFSQSSRISQALDFF 339
Score = 73.6 bits (179), Expect = 1e-10
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Frame = +3
Query: 33 DRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFD 212
+ ++ V LV YAK G++ +R VF+GM +++ W+++I Y+ H S+ FD
Sbjct: 555 ESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYIL-HGCSDSAFQLFD 613
Query: 213 MMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYA 392
MR + P+ L I+ A G +D GR + S + + + YL+ ++ +Y
Sbjct: 614 QMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLA--MVDLYG 671
Query: 393 KCGELEMATKFFEGMGKRDSVS-WNSIITGHCQLSEHEVAMRLFARMRAEGIEP-SPITW 566
+ G L A +F E M VS W S++T C+ + + + A R +EP + + +
Sbjct: 672 RSGRLADAIEFIEDMPIEPDVSIWTSLLTA-CRF-HGNLNLAVLAAKRLHELEPDNHVIY 729
Query: 567 TILITGYHQSGKPELAMELMEQMKRS 644
+L+ Y GK E +++ + K S
Sbjct: 730 RLLVQAYALYGKFEQTLKVRKLGKES 755
>gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus vulgaris]
Length = 893
Score = 349 bits (896), Expect = 9e-94
Identities = 173/343 (50%), Positives = 235/343 (68%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LHA + VR + FV+TKLVSMYAKCG L++AR+VFD M +RNLF WSAMIGA R+ +W
Sbjct: 106 LHARVGLVRKVNPFVETKLVSMYAKCGLLEEARKVFDEMHERNLFTWSAMIGACSRDLKW 165
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV++LF++MM+ GV +PD +LLP+IL+AC + GRL+HS+ ++ G +S +
Sbjct: 166 DEVVELFYNMMQHGV-LPDDFLLPKILKACGKCRAFEAGRLIHSMVIRRGRCSSLR---V 221
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
N++L++YAKCGE+ A K F M +R+ VSWN IITG+CQ E E A + F M+ EGI
Sbjct: 222 INSILAVYAKCGEMTYAEKLFRRMEERNYVSWNVIITGYCQKGEIEEARKYFDAMQGEGI 281
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
+P +TW ILI Y Q G+ E+A++LM M+ G PDV+TWTS+ISG TQ GR ++A
Sbjct: 282 DPGLVTWNILIASYSQCGQSEIAIDLMRMMESFGITPDVYTWTSLISGFTQKGRINDAFD 341
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
EM GV PNS+++ + G E+HS A K +L+GNSLI++YA
Sbjct: 342 LLREMFIVGVEPNSITIASAVSACASVKSLSMGSEVHSIAVKTSLVDDMLIGNSLIDMYA 401
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
K L AQ+IFD ML++DV+SWNS+IGGY QAG+CGKA+ELF
Sbjct: 402 KGGNLEAAQRIFDVMLKRDVYSWNSIIGGYCQAGFCGKAHELF 444
Score = 206 bits (525), Expect = 9e-51
Identities = 110/330 (33%), Positives = 188/330 (56%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLD---DARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y++CG + D R+ + G +++ W+++I + ++ R ++ DL +M G
Sbjct: 291 LIASYSQCGQSEIAIDLMRMMESFGITPDVYTWTSLISGFTQKGRINDAFDLLREMFIVG 350
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P+ + + AC++ +L +G +HS+AVKT L++ + N+++ MYAK G L
Sbjct: 351 VE-PNSITIASAVSACASVKSLSMGSEVHSIAVKTSLVDDM---LIGNSLIDMYAKGGNL 406
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ M KRD SWNSII G+CQ A LF +M+ P+ +TW ++ITG+
Sbjct: 407 EAAQRIFDVMLKRDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGF 466
Query: 588 HQSGKPELAMELMEQMKRSGTV-PDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + A++L +++++ G + P+V +W S+ISG Q+ + ++AL F MQFS + PN
Sbjct: 467 MQNGAEDEALDLFQRIEKDGNIKPNVASWNSLISGFLQSRQKEKALQIFRRMQFSNMAPN 526
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
++V K KE+H A + + V N+ I+ YAK + ++K+FD
Sbjct: 527 LVTVLTILPACANLVAAKKVKEIHCCAIRRNLVSELYVSNTFIDNYAKSGNIMYSRKVFD 586
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
G+ KD+ SWNS++ GY G A +LF
Sbjct: 587 GLSPKDIISWNSLLSGYVLHGSSESALDLF 616
Score = 94.4 bits (233), Expect = 7e-17
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 72/314 (22%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYV------REHR------ 182
D+ + L+ MYAK G+L+ A+R+FD M +R++++W+++IG Y + H
Sbjct: 389 DMLIGNSLIDMYAKGGNLEAAQRIFDVMLKRDVYSWNSIIGGYCQAGFCGKAHELFMKMQ 448
Query: 183 ----------WS-------------EVLDLFFDMMREGVVIPD---------GYLLPR-- 260
W+ E LDLF + ++G + P+ G+L R
Sbjct: 449 ESDSPPNVVTWNVMITGFMQNGAEDEALDLFQRIEKDGNIKPNVASWNSLISGFLQSRQK 508
Query: 261 ------------------------ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLS 368
IL AC+N + +H A++ L++ Y+S
Sbjct: 509 EKALQIFRRMQFSNMAPNLVTVLTILPACANLVAAKKVKEIHCCAIRRNLVSE---LYVS 565
Query: 369 NTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARM-RAEGI 545
NT + YAK G + + K F+G+ +D +SWNS+++G+ E A+ LF +M + + +
Sbjct: 566 NTFIDNYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGSSESALDLFDQMNKDDRL 625
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRS-GTVPDVFTWTSMISGLTQNGRTDEAL 722
P+ +T +I+ Y +G + M + D+ +++M+ L ++G+ EA
Sbjct: 626 HPNRVTLASIISAYSHAGMVDEGKHAFSNMSEDFKIILDLEHYSAMVYLLGRSGKLAEAQ 685
Query: 723 SFFHEMQFSGVNPN 764
F M + PN
Sbjct: 686 EFILNMP---IEPN 696
Score = 73.9 bits (180), Expect = 9e-11
Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 39/296 (13%)
Frame = +3
Query: 261 ILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGMG 440
+LQAC + + VGR LH+ + GL+ ++ ++SMYAKCG LE A K F+ M
Sbjct: 90 LLQACIDRDCIWVGRELHA---RVGLVRKVN-PFVETKLVSMYAKCGLLEEARKVFDEMH 145
Query: 441 KRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPI-------------------- 560
+R+ +W+++I + + + + LF M G+ P
Sbjct: 146 ERNLFTWSAMIGACSRDLKWDEVVELFYNMMQHGVLPDDFLLPKILKACGKCRAFEAGRL 205
Query: 561 ---------------TWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLT 695
++ Y + G+ A +L +M+ V +W +I+G
Sbjct: 206 IHSMVIRRGRCSSLRVINSILAVYAKCGEMTYAEKLFRRMEERNYV----SWNVIITGYC 261
Query: 696 QNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSIL 875
Q G +EA +F MQ G++P ++
Sbjct: 262 QKGEIEEARKYFDAMQGEGIDP-----------------------------------GLV 286
Query: 876 VGNSLIELYAKCDR---LADAQKIFDGM-LEKDVFSWNSMIGGYAQAGYCGKAYEL 1031
N LI Y++C + D ++ + + DV++W S+I G+ Q G A++L
Sbjct: 287 TWNILIASYSQCGQSEIAIDLMRMMESFGITPDVYTWTSLISGFTQKGRINDAFDL 342
Score = 67.0 bits (162), Expect = 1e-08
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
+++V + YAK G++ +R+VFDG+ +++ +W++++ YV LDLF M
Sbjct: 561 ELYVSNTFIDNYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGSSESALDLFDQMN 620
Query: 219 REGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKC 398
++ + P+ L I+ A S+ G +D G+ S + + Y + ++ + +
Sbjct: 621 KDDRLHPNRVTLASIISAYSHAGMVDEGKHAFSNMSEDFKIILDLEHY--SAMVYLLGRS 678
Query: 399 GELEMATKFFEGMGKRDSVS-WNSIITGHCQLSEHEVAMRLFARMRAEGIEP-SPITWTI 572
G+L A +F M ++S W + +T C++ M +FA R ++P + IT +
Sbjct: 679 GKLAEAQEFILNMPIEPNISVWTAFLTA-CRI-HRNFGMAIFAGERLLELDPENIITQHL 736
Query: 573 LITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSM 680
L Y GK A ++ + K +P +W M
Sbjct: 737 LSQAYSLCGKYWEAPKMTKLEKEK--IPVGQSWIEM 770
>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Solanum lycopersicum]
Length = 884
Score = 346 bits (887), Expect = 1e-92
Identities = 169/345 (48%), Positives = 244/345 (70%), Gaps = 1/345 (0%)
Frame = +3
Query: 3 RLHASISSVRDR-DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREH 179
+LH ++ + ++ D F++TKL+ MY+KCGSL +A +FD M +R+LFAWSAMIGA R+
Sbjct: 95 KLHKEMNILLEKVDPFIETKLLGMYSKCGSLQEAYEMFDKMRKRDLFAWSAMIGACSRDS 154
Query: 180 RWSEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGAS 359
RWSEV++LF+ MM +GVV PD +L PRILQA +N G+++ G L+HS+A++ G+ S
Sbjct: 155 RWSEVMELFYMMMGDGVV-PDSFLFPRILQASANCGDVETGMLIHSIAIRCGM---SSEI 210
Query: 360 YLSNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAE 539
++N++L++YAKCG L A + FE M RD+VSWNS+I +C + VA RL M E
Sbjct: 211 RVNNSLLAVYAKCGLLGCAKRIFESMEMRDTVSWNSMIMAYCHKGDIVVARRLLNLMPLE 270
Query: 540 GIEPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEA 719
G+EP ITW ILI Y+Q G+ + A+E+M++M+ +G +PDVFTWTS+ISG++Q+ R +A
Sbjct: 271 GVEPGLITWNILIASYNQLGRCDEALEVMKEMEGNGIMPDVFTWTSLISGMSQHNRNSQA 330
Query: 720 LSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIEL 899
L F EM +GV P+ +++ KGKELHS KLG ++VGN+L++L
Sbjct: 331 LELFREMILNGVTPSEVTLTSTVSACASLKDLRKGKELHSLVVKLGFDGGVIVGNALVDL 390
Query: 900 YAKCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
Y+KC +L A+++FD + EKDV+SWNS+IGGY QAG CGKAY+LF
Sbjct: 391 YSKCGKLEAARQVFDMIPEKDVYSWNSLIGGYCQAGCCGKAYDLF 435
Score = 204 bits (520), Expect = 4e-50
Identities = 112/330 (33%), Positives = 186/330 (56%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVF---DGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L++ Y + G D+A V +G G ++F W+++I + +R S+ L+LF +M+ G
Sbjct: 282 LIASYNQLGRCDEALEVMKEMEGNGIMPDVFTWTSLISGMSQHNRNSQALELFREMILNG 341
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V P L + AC++ +L G+ LHSL VK G G + N ++ +Y+KCG+L
Sbjct: 342 VT-PSEVTLTSTVSACASLKDLRKGKELHSLVVKLGF---DGGVIVGNALVDLYSKCGKL 397
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
E A + F+ + ++D SWNS+I G+CQ A LF +M + P+ ITW +LITG+
Sbjct: 398 EAARQVFDMIPEKDVYSWNSLIGGYCQAGCCGKAYDLFMKMHEFAVSPNVITWNVLITGH 457
Query: 588 HQSGKPELAMELMEQMKRSGTVP-DVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
Q+G + A++L +M++ G V D +W ++I+G NG+ D+AL F +MQ SG+ PN
Sbjct: 458 MQNGDEDQALDLFWRMEKDGNVERDAASWNALIAGYLHNGQKDKALGIFRKMQSSGLKPN 517
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
++++ K KE+H + + + + NSLI+ Y+K L ++ IFD
Sbjct: 518 TVTILSILPACANLIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGGLQYSKTIFD 577
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
M KD+ SWN++I GY G+ ++ +LF
Sbjct: 578 VMSTKDIISWNTLIAGYVLHGFSSESTKLF 607
Score = 102 bits (255), Expect = 2e-19
Identities = 75/360 (20%), Positives = 153/360 (42%), Gaps = 42/360 (11%)
Frame = +3
Query: 33 DRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFD 212
D V V LV +Y+KCG L+ AR+VFD + ++++++W+++IG Y + + DLF
Sbjct: 378 DGGVIVGNALVDLYSKCGKLEAARQVFDMIPEKDVYSWNSLIGGYCQAGCCGKAYDLFMK 437
Query: 213 MMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYA 392
M H AV ++ N +++ +
Sbjct: 438 M--------------------------------HEFAVSPNVIT-------WNVLITGHM 458
Query: 393 KCGELEMATKFF-----EGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSP 557
+ G+ + A F +G +RD+ SWN++I G+ + + A+ +F +M++ G++P+
Sbjct: 459 QNGDEDQALDLFWRMEKDGNVERDAASWNALIAGYLHNGQKDKALGIFRKMQSSGLKPNT 518
Query: 558 ITWTILITG-------------------YHQSGKPELAMELMEQMKRSG----------- 647
+T ++ + + +A L++ +SG
Sbjct: 519 VTILSILPACANLIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGGLQYSKTIFDV 578
Query: 648 -TVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKG 824
+ D+ +W ++I+G +G + E+ FH+M+ +G+ PN + +G
Sbjct: 579 MSTKDIISWNTLIAGYVLHGFSSESTKLFHQMEEAGLKPNRGTFSSVILSYGLAKMVEEG 638
Query: 825 KELHS-----YAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFDGM-LEKDVFSWNSMI 986
K + S Y G H + +++ LY + +L +A D M +E D+ W +++
Sbjct: 639 KRMFSSMSEKYRIVPGLEHCV----AMVNLYGRSGKLEEAINFIDNMTMEHDISIWGALL 694
Score = 82.4 bits (202), Expect = 3e-13
Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Frame = +3
Query: 258 RILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGELEMATKFFEGM 437
R++++C N +L +GR LH + +L ++ +L MY+KCG L+ A + F+ M
Sbjct: 79 RLIESCINEKSLYLGRKLHK---EMNILLEKVDPFIETKLLGMYSKCGSLQEAYEMFDKM 135
Query: 438 GKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGYHQSGKPELAM 617
KRD +W+++I + S M LF M +G+ P + ++ G E M
Sbjct: 136 RKRDLFAWSAMIGACSRDSRWSEVMELFYMMMGDGVVPDSFLFPRILQASANCGDVETGM 195
Query: 618 ELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFFHEMQF-SGVNPNSMSVXXXXXX 794
+ R G ++ S+++ + G A F M+ V+ NSM +
Sbjct: 196 LIHSIAIRCGMSSEIRVNNSLLAVYAKCGLLGCAKRIFESMEMRDTVSWNSMIMAYCHKG 255
Query: 795 XXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELY---AKCDRLADAQKIFDGM-LEKD 962
+ L + G ++ N LI Y +CD + K +G + D
Sbjct: 256 DIVV-----ARRLLNLMPLEGVEPGLITWNILIASYNQLGRCDEALEVMKEMEGNGIMPD 310
Query: 963 VFSWNSMIGGYAQAGYCGKAYELF 1034
VF+W S+I G +Q +A ELF
Sbjct: 311 VFTWTSLISGMSQHNRNSQALELF 334
>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 887
Score = 342 bits (878), Expect = 1e-91
Identities = 171/343 (49%), Positives = 235/343 (68%)
Frame = +3
Query: 6 LHASISSVRDRDVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRW 185
LH+ I V + + FV+TKLVSMYAKCG L AR+VF+ M RNLF WSAMIG R W
Sbjct: 105 LHSRIGLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSW 164
Query: 186 SEVLDLFFDMMREGVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYL 365
EV+ LF+ MMR+GV +PD +LLP++LQAC +L+ GRL+HS+ ++ G+ S +L
Sbjct: 165 GEVVGLFYAMMRDGV-LPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSK---HL 220
Query: 366 SNTVLSMYAKCGELEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGI 545
N+++++YAKCGE++ A K F+ M +RDSV+WN++I+G CQ E A + F M+ +G+
Sbjct: 221 RNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGV 280
Query: 546 EPSPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALS 725
EPS +TW ILI+ Y+Q G +LA++LM +M+ G PDV+TWTSMISG TQ GR AL
Sbjct: 281 EPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALD 340
Query: 726 FFHEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYA 905
EM +GV N++++ + G E+HS A K+ ++LVGNSLI++Y
Sbjct: 341 LLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYC 400
Query: 906 KCDRLADAQKIFDGMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
KC L AQ IFD M E+DV+SWNS+IGGY QAG+CGKA+ELF
Sbjct: 401 KCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELF 443
Score = 188 bits (478), Expect = 3e-45
Identities = 113/330 (34%), Positives = 176/330 (53%), Gaps = 5/330 (1%)
Frame = +3
Query: 60 LVSMYAKCGSLD---DARRVFDGMG-QRNLFAWSAMIGAYVREHRWSEVLDLFFDMMREG 227
L+S Y + G D D R + G +++ W++MI + ++ R S LDL +M G
Sbjct: 290 LISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAG 349
Query: 228 VVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGEL 407
V + + AC+ +L +G +HS+AVK L+++ + N+++ MY KCG+L
Sbjct: 350 VEA-NNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNV---LVGNSLIDMYCKCGDL 405
Query: 408 EMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITGY 587
+ A F+ M +RD SWNSII G+ Q A LF +M+ P+ ITW I+ITGY
Sbjct: 406 KAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGY 465
Query: 588 HQSGKPELAMELMEQMKRSG-TVPDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNPN 764
QSG + A++L + +++ G T + +W S+ISG Q+G+ D+AL F MQF + PN
Sbjct: 466 MQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPN 525
Query: 765 SMSVXXXXXXXXXXXXXNKGKELHSYAFKLGGSHSILVGNSLIELYAKCDRLADAQKIFD 944
S+++ K KE+H +A + + V N LI+ YAK L ++ IF+
Sbjct: 526 SVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFN 585
Query: 945 GMLEKDVFSWNSMIGGYAQAGYCGKAYELF 1034
+ KD SWNSM+ Y G A +LF
Sbjct: 586 ELSWKDAVSWNSMLSSYVLHGCSESALDLF 615
Score = 88.6 bits (218), Expect = 4e-15
Identities = 61/242 (25%), Positives = 123/242 (50%), Gaps = 6/242 (2%)
Frame = +3
Query: 60 LVSMYAKCGSLDDARRVF-----DGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMMRE 224
+++ Y + G+ D A +F DG +RN +W+++I +V+ + + L +F +M +
Sbjct: 461 MITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNM-QF 519
Query: 225 GVVIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMYAKCGE 404
++P+ + IL C+N + +H AV+ L++ +SN ++ YAK G
Sbjct: 520 CHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELS---VSNLLIDSYAKSGN 576
Query: 405 LEMATKFFEGMGKRDSVSWNSIITGHCQLSEHEVAMRLFARMRAEGIEPSPITWTILITG 584
L + F + +D+VSWNS+++ + E A+ LF +MR +G++P+ T+ ++
Sbjct: 577 LMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLA 636
Query: 585 YHQSGKPELAMELMEQMKRSGTV-PDVFTWTSMISGLTQNGRTDEALSFFHEMQFSGVNP 761
Y +G + + + + V + +++M+ L ++G+ EAL F M + P
Sbjct: 637 YGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMP---IEP 693
Query: 762 NS 767
NS
Sbjct: 694 NS 695
Score = 84.0 bits (206), Expect = 9e-14
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 15/331 (4%)
Frame = +3
Query: 39 DVFVDTKLVSMYAKCGSLDDARRVFDGMGQRNLFAWSAMIGAYVREHRWSEVLDLFFDMM 218
+V V L+ MY KCG L A+ +FD M +R++++W+++IG Y + + +LF M
Sbjct: 388 NVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQ 447
Query: 219 REGV---VIPDGYLLPRILQACSNTGNLDVGRLLHSLAVKTGLLNSSGASYLSNTVLSMY 389
+I ++ +Q+ + LD+ + + K G + AS+ N+++S +
Sbjct: 448 ESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIE----KDGKTKRNAASW--NSLISGF 501
Query: 390 AKCGELEMATKFFEGMG----KRDSVSWNSI--ITGHCQLSEHEVAMRLFARMRAEGIEP 551
+ G+ + A + F M +SV+ SI + + S+ + FA R E
Sbjct: 502 VQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSEL 561
Query: 552 SPITWTILITGYHQSGKPELAMELMEQMKRSGTVPDVFTWTSMISGLTQNGRTDEALSFF 731
S +LI Y +SG + + ++ + D +W SM+S +G ++ AL F
Sbjct: 562 S--VSNLLIDSYAKSGNLMYSKNIFNEL----SWKDAVSWNSMLSSYVLHGCSESALDLF 615
Query: 732 HEMQFSGVNPNSMSVXXXXXXXXXXXXXNKGKELHS-----YAFKLGGSHSILVGNSLIE 896
++M+ G+ PN + ++GK + S Y + G H ++++
Sbjct: 616 YQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHY----SAMVY 671
Query: 897 LYAKCDRLADAQKIFDGM-LEKDVFSWNSMI 986
L + +LA+A M +E + W +++
Sbjct: 672 LLGRSGKLAEALDFIQSMPIEPNSSVWGALL 702