BLASTX nr result

ID: Zingiber25_contig00021979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00021979
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050391.1| Os03g0423000 [Oryza sativa Japonica Group] g...    58   1e-06
gb|EAY90508.1| hypothetical protein OsI_12108 [Oryza sativa Indi...    58   1e-06
ref|XP_006650203.1| PREDICTED: F-box protein At5g39250-like [Ory...    56   6e-06

>ref|NP_001050391.1| Os03g0423000 [Oryza sativa Japonica Group]
           gi|30089733|gb|AAP20837.1| expressed protein [Oryza
           sativa Japonica Group] gi|108708889|gb|ABF96684.1| F-box
           domain containing protein, expressed [Oryza sativa
           Japonica Group] gi|113548862|dbj|BAF12305.1|
           Os03g0423000 [Oryza sativa Japonica Group]
           gi|125586708|gb|EAZ27372.1| hypothetical protein
           OsJ_11320 [Oryza sativa Japonica Group]
           gi|215697584|dbj|BAG91578.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 250

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 300 KTSLSSEVLKAVFPLLDGEDLVSCMLVCRQWR 395
           +  LS EVLKAVFPLLDG+DLV CMLVCRQWR
Sbjct: 2   ENGLSDEVLKAVFPLLDGQDLVFCMLVCRQWR 33


>gb|EAY90508.1| hypothetical protein OsI_12108 [Oryza sativa Indica Group]
          Length = 250

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 300 KTSLSSEVLKAVFPLLDGEDLVSCMLVCRQWR 395
           +  LS EVLKAVFPLLDG+DLV CMLVCRQWR
Sbjct: 2   ENGLSDEVLKAVFPLLDGKDLVFCMLVCRQWR 33


>ref|XP_006650203.1| PREDICTED: F-box protein At5g39250-like [Oryza brachyantha]
          Length = 251

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +3

Query: 300 KTSLSSEVLKAVFPLLDGEDLVSCMLVCRQWR 395
           +  L  EVLKAVFPLLDG+DLV CMLVCRQWR
Sbjct: 2   ENGLHDEVLKAVFPLLDGKDLVFCMLVCRQWR 33


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