BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00021933
         (1328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566273.1| PREDICTED: pentatricopeptide repeat-containi...   496   e-138
gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indi...   494   e-137
ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group] g...   493   e-137
gb|EMT22149.1| hypothetical protein F775_03881 [Aegilops tauschii]    478   e-132
ref|XP_002441052.1| hypothetical protein SORBIDRAFT_09g019485 [S...   476   e-132
tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea m...   474   e-131
ref|XP_004962174.1| PREDICTED: pentatricopeptide repeat-containi...   473   e-131
ref|XP_006655290.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-129
gb|EEE63625.1| hypothetical protein OsJ_18442 [Oryza sativa Japo...   437   e-120
ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-111
gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indi...   395   e-107
ref|XP_006665044.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japo...   393   e-106
ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group] g...   393   e-106
gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]    374   e-101
ref|XP_004952365.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-100
gb|EMT18492.1| hypothetical protein F775_20328 [Aegilops tauschii]    365   2e-98
ref|NP_001147934.1| fertility restorer [Zea mays] gi|195614680|g...   359   1e-96
gb|ACF86948.1| unknown [Zea mays] gi|414591270|tpg|DAA41841.1| T...   357   8e-96
ref|XP_004960083.1| PREDICTED: pentatricopeptide repeat-containi...   343   9e-92

>ref|XP_003566273.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Brachypodium distachyon]
          Length = 550

 Score =  496 bits (1277), Expect = e-138
 Identities = 246/439 (56%), Positives = 316/439 (71%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L+S+ R   AL V E M   G++PD  A TVLV +Y+C L QFDAAYEVVRWM   G AP
Sbjct: 109  LSSASRPGAALAVLEAMAADGVAPDTVACTVLVGVYACRLQQFDAAYEVVRWMTDNGVAP 168

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DVVTYSTLI GLC A RV EALG+LD MLEE C PNA+T+TPI+ AYC++G I +AK L+
Sbjct: 169  DVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAHTYTPIMHAYCTTGMIHEAKKLL 228

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            ++M   GC P+T TYNVL+EAL K+GAF+EV+ LL+++T K W PDTITYS YMD LC+ 
Sbjct: 229  DSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEESTSKGWIPDTITYSTYMDGLCRS 288

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G  DKSF L + ML  GL PN VTLNILL+ +CR+  AW AK LLE SA++ W ASV+NY
Sbjct: 289  GRVDKSFALVDRMLSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLECSAELGWDASVINY 348

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVM RL D  RW AV+KLF DM KKGI  NSWT +IVVHSL K G +  A  +  S  F
Sbjct: 349  NTVMRRLCDERRWLAVVKLFTDMSKKGIAPNSWTLNIVVHSLCKLGKLRNALCLMGSEEF 408

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
            V N ++Y TLIH+  ++GK ++V+ L   M  E IAPN  TYS++I CLCR++++  A+ 
Sbjct: 409  VANAITYNTLIHHLSLSGKANEVYLLLHDMIEEGIAPNETTYSLVIDCLCREEKFSVALS 468

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CFYRS +DG+SP  V+ ++  L+ GGKL E+  L+ WIL QGF IDV ++  +I AFC+ 
Sbjct: 469  CFYRSCEDGFSPSAVSSIVRGLINGGKLGELHNLIGWILGQGFAIDVYMYREVIIAFCKK 528

Query: 64   GYCRSSRIYEICRMLDKML 8
            GYC+   +Y++C +L++ML
Sbjct: 529  GYCQGKEMYKVCHVLERML 547



 Score =  113 bits (283), Expect = 2e-22
 Identities = 95/361 (26%), Positives = 162/361 (44%), Gaps = 10/361 (2%)
 Frame = -2

Query: 1090 EEALGILDQMLEE-ECLPNAYTFTPIVQAYCSSGRIDKAKGLMNTMEIIGCPPNTVTYNV 914
            + AL +LD+M    +  P+A  FT +  A  S+ R   A  ++  M   G  P+TV   V
Sbjct: 80   DRALQLLDEMRSLLQRRPDAACFTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTV 139

Query: 913  LVEA-LCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKLGLADKSFDLFEVMLER 737
            LV    C++  FD    +++  T     PD +TYS  +  LC+     ++  + ++MLE 
Sbjct: 140  LVGVYACRLQQFDAAYEVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEE 199

Query: 736  GLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAV 557
            G  PNA T   ++   C      EAK+LL+         S   YN ++  LS  G +  V
Sbjct: 200  GCHPNAHTYTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEV 259

Query: 556  LKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFD---SNGFVPNVMSYTTLIHY 386
              L  +   KG   ++ T+S  +  L ++G V  +  + D   SNG  PN ++   L++ 
Sbjct: 260  DVLLEESTSKGWIPDTITYSTYMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILLNG 319

Query: 385  SYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSP- 209
               +        L +  A      + I Y+ ++  LC ++R+L  V  F    K G +P 
Sbjct: 320  VCRSLTAWAAKCLLECSAELGWDASVINYNTVMRRLCDERRWLAVVKLFTDMSKKGIAPN 379

Query: 208  ----KLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGYCRSSRI 41
                 +V H L +L   GKL+   CL+     + F  +   +++LI     +G  +++ +
Sbjct: 380  SWTLNIVVHSLCKL---GKLRNALCLMG---SEEFVANAITYNTLIHHLSLSG--KANEV 431

Query: 40   Y 38
            Y
Sbjct: 432  Y 432


>gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
          Length = 633

 Score =  494 bits (1272), Expect = e-137
 Identities = 249/441 (56%), Positives = 321/441 (72%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L+S+ R   AL V + M   G++PDAAA TVLV +Y+C L +FDAAYEVVRWMV  G AP
Sbjct: 192  LSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAP 251

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DVVTYSTLI+GLC AG+V EALG+LD MLEE C PNA+T+TPIV AYC+ GRI +AK L+
Sbjct: 252  DVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLL 311

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            NTM   G  P+T TYNVLVEALCK+GAF+EV+ LL+++T K W PD ITYS YMD LCK 
Sbjct: 312  NTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKA 371

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G  DKSF L + ML  GLQP+ VTLNILLD +CR+S AW AKRLLE SA++ W A+VVNY
Sbjct: 372  GRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNY 431

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVM RL D  RW +V+KLF DM KKGI  NSWTF+IVVHSL K G +  A  +  S  F
Sbjct: 432  NTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALCLLRSKEF 491

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
            V  V++Y TLI +  I+G+ ++V  L  +M    IAPN ITYS++I CLCR++++L A+ 
Sbjct: 492  VATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFLVALC 551

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CFY+S +D + P     ++  L+ GG L ++  L+  +L QGF I+V I+  LIKA C+ 
Sbjct: 552  CFYQSLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQELIKALCKN 611

Query: 64   GYCRSSRIYEICRMLDKMLQI 2
            GYC+S  +Y++C +L++ML++
Sbjct: 612  GYCQSVEMYKVCHILERMLRL 632


>ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
            gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa
            Japonica Group]
          Length = 553

 Score =  493 bits (1270), Expect = e-137
 Identities = 248/441 (56%), Positives = 321/441 (72%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L+S+ R   AL V + M   G++PDAAA TVLV +Y+C L +FDAAYEVVRWMV  G AP
Sbjct: 112  LSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAP 171

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DVVTYSTLI+GLC AG+V EALG+LD MLEE C PNA+T+TPIV AYC+ GRI +AK L+
Sbjct: 172  DVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLL 231

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            NTM   G  P+T TYNVLVEALCK+GAF+EV+ LL+++T K W PD ITYS YMD LCK 
Sbjct: 232  NTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKA 291

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G  DKSF L + ML  GLQP+ VTLNILLD +CR+S AW AKRLLE SA++ W A+VVNY
Sbjct: 292  GRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNY 351

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVM +L D  RW +V+KLF DM KKGI  NSWTF+IVVHSL K G +  A  +  S  F
Sbjct: 352  NTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLLRSKEF 411

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
            V  V++Y TLI +  I+G+ ++V  L  +M    IAPN ITYS++I CLCR++++L A+ 
Sbjct: 412  VATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFLVALC 471

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CFY+S +D + P     ++  L+ GG L ++  L+  +L QGF I+V I+  LIKA C+ 
Sbjct: 472  CFYQSLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQELIKALCKN 531

Query: 64   GYCRSSRIYEICRMLDKMLQI 2
            GYC+S  +Y++C +L++ML++
Sbjct: 532  GYCQSVEMYKVCHILERMLRL 552


>gb|EMT22149.1| hypothetical protein F775_03881 [Aegilops tauschii]
          Length = 426

 Score =  478 bits (1230), Expect = e-132
 Identities = 236/421 (56%), Positives = 305/421 (72%)
 Frame = -2

Query: 1264 GISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAPDVVTYSTLIAGLCWAGRVEE 1085
            G++PD  A T +V +  C L +FDAAYEVV WM + G APDVVTYSTLI GLC AGRV E
Sbjct: 5    GVTPDTVACTGVVGVSPCHLRRFDAAYEVVGWMTENGVAPDVVTYSTLICGLCSAGRVAE 64

Query: 1084 ALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLMNTMEIIGCPPNTVTYNVLVE 905
            ALG+LD MLEE C PNA+T+TPI+ AY ++G I +AK L+++M   GC P+T TYNVL++
Sbjct: 65   ALGVLDLMLEEGCHPNAHTYTPIMHAYSATGMIHEAKKLLDSMIAAGCAPSTATYNVLIK 124

Query: 904  ALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKLGLADKSFDLFEVMLERGLQP 725
            ALCK GAF+EVE LL++++ K W PDTITYS YMD L + G  DKSF L + ML +GL P
Sbjct: 125  ALCKAGAFEEVEVLLEESSSKGWTPDTITYSTYMDGLSRSGRLDKSFALVDRMLSKGLHP 184

Query: 724  NAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLF 545
            N VTLNILLD +CR S AW AK LLE SADI W ASVVNYNTVM RL D  +W AV+KLF
Sbjct: 185  NEVTLNILLDGVCRTSSAWAAKWLLECSADIGWDASVVNYNTVMRRLCDERKWLAVVKLF 244

Query: 544  VDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKE 365
             DM KKGI  NSWTF+IVVHSL K G +  A  +  S GFV +V++Y TLI +  + GK 
Sbjct: 245  TDMSKKGIAPNSWTFNIVVHSLCKLGKLHNALCLMGSEGFVASVITYNTLIRHLSLLGKS 304

Query: 364  HDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAHLLY 185
            ++V+ L   M  E IAPN  TY ++I CLCR++++L A+ CFYRS +DG+SP +V  ++ 
Sbjct: 305  NEVYLLLHDMIEEGIAPNETTYILVIDCLCREEKFLAALSCFYRSLEDGFSPSVVTSIVR 364

Query: 184  QLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGYCRSSRIYEICRMLDKMLQ 5
             L+ GGK  E+  L+ WIL QGF IDV ++  +I AFC+ GYC+ + +Y++C +L++ML 
Sbjct: 365  GLIVGGKFGELHTLIGWILGQGFAIDVYLYRVVIIAFCKKGYCQGTEMYKVCHILERMLS 424

Query: 4    I 2
            +
Sbjct: 425  L 425



 Score =  160 bits (404), Expect = 1e-36
 Identities = 106/354 (29%), Positives = 175/354 (49%), Gaps = 3/354 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L S+GR  EAL V + ML  G  P+A  +T ++  YS   G    A +++  M+  GCAP
Sbjct: 56   LCSAGRVAEALGVLDLMLEEGCHPNAHTYTPIMHAYS-ATGMIHEAKKLLDSMIAAGCAP 114

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
               TY+ LI  LC AG  EE   +L++   +   P+  T++  +     SGR+DK+  L+
Sbjct: 115  STATYNVLIKALCKAGAFEEVEVLLEESSSKGWTPDTITYSTYMDGLSRSGRLDKSFALV 174

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            + M   G  PN VT N+L++ +C+  +    + LL+ +    W    + Y+  M  LC  
Sbjct: 175  DRMLSKGLHPNEVTLNILLDGVCRTSSAWAAKWLLECSADIGWDASVVNYNTVMRRLCDE 234

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
                    LF  M ++G+ PN+ T NI++  LC+  +   A  L+       ++ASV+ Y
Sbjct: 235  RKWLAVVKLFTDMSKKGIAPNSWTFNIVVHSLCKLGKLHNALCLMGSEG---FVASVITY 291

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFD---S 434
            NT++  LS  G+   V  L  DM ++GI  N  T+ +V+  L +      A   F     
Sbjct: 292  NTLIRHLSLLGKSNEVYLLLHDMIEEGIAPNETTYILVIDCLCREEKFLAALSCFYRSLE 351

Query: 433  NGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCR 272
            +GF P+V+  T+++    + GK  ++H L   +  +  A +   Y V+I   C+
Sbjct: 352  DGFSPSVV--TSIVRGLIVGGKFGELHTLIGWILGQGFAIDVYLYRVVIIAFCK 403


>ref|XP_002441052.1| hypothetical protein SORBIDRAFT_09g019485 [Sorghum bicolor]
            gi|241946337|gb|EES19482.1| hypothetical protein
            SORBIDRAFT_09g019485 [Sorghum bicolor]
          Length = 548

 Score =  476 bits (1225), Expect = e-132
 Identities = 242/440 (55%), Positives = 307/440 (69%)
 Frame = -2

Query: 1321 ASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAPD 1142
            +S+ +   AL V   M   G+ PD AA TVLV +Y+C L  FDAAYEVVRWM   G APD
Sbjct: 108  SSASQPGAALAVLNAMAADGVVPDTAACTVLVGVYACRLHWFDAAYEVVRWMAANGVAPD 167

Query: 1141 VVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLMN 962
            VVTYSTLI+GLC AGRV EALG+LD MLEE C PNA+T+TPI+ AYC+SG I +AK L+ 
Sbjct: 168  VVTYSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKDLLE 227

Query: 961  TMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKLG 782
            TM   G  P+T TYNVLVEALCK  AF+EV+ LL++++ K W PDTITYS YMD LCK G
Sbjct: 228  TMVAAGFAPSTATYNVLVEALCKACAFEEVDKLLEESSAKGWTPDTITYSTYMDGLCKNG 287

Query: 781  LADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNYN 602
              DKS  L + ML  GL+PN +TLNILLD +CR S AW AK LLE SA+I W  +VVNYN
Sbjct: 288  RVDKSLALVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYN 347

Query: 601  TVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGFV 422
            TVM RL D  RW AV+KLFVDM KKGI  NSWTFSIV+HSL K G +  A  +  S  FV
Sbjct: 348  TVMRRLCDERRWLAVVKLFVDMVKKGIAPNSWTFSIVIHSLCKLGKLHEALCLLGSEEFV 407

Query: 421  PNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGC 242
             NV++Y TLI +    GK  + + L  +M  + IAPN ITYS++I CLC++ ++L A+ C
Sbjct: 408  ANVVTYNTLIRHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCLCKEGKFLVALSC 467

Query: 241  FYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
              +  + G S   V+ +L  L+ GGKL+E+  L+ WIL QGF IDV ++  LI +FC+ G
Sbjct: 468  LNQCIEGGLSKAAVSSILRGLIAGGKLRELQALIGWILGQGFIIDVYMYQELIISFCKKG 527

Query: 61   YCRSSRIYEICRMLDKMLQI 2
            YCR   +Y +C +L++M+++
Sbjct: 528  YCRGLEMYIMCHILERMIRL 547



 Score =  150 bits (380), Expect = 9e-34
 Identities = 102/386 (26%), Positives = 187/386 (48%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L S+GR  EAL V + ML  G  P+A  +T ++  Y C  G    A +++  MV  G AP
Sbjct: 178  LCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAY-CTSGMIHEAKDLLETMVAAGFAP 236

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
               TY+ L+  LC A   EE   +L++   +   P+  T++  +   C +GR+DK+  L+
Sbjct: 237  STATYNVLVEALCKACAFEEVDKLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLALV 296

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            + M  +G  PN +T N+L++ +C+       + LL+ +    W  + + Y+  M  LC  
Sbjct: 297  DKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDE 356

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
                    LF  M+++G+ PN+ T +I++  LC+  +  EA  LL      +++A+VV Y
Sbjct: 357  RRWLAVVKLFVDMVKKGIAPNSWTFSIVIHSLCKLGKLHEALCLL---GSEEFVANVVTY 413

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAG--MVSLAKLVFDSN 431
            NT++  L+  G+      L  +M +KGI  N  T+S+++  L K G  +V+L+ L     
Sbjct: 414  NTLIRHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCLCKEGKFLVALSCLNQCIE 473

Query: 430  GFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEA 251
            G +    + ++++      GK  ++  L   +  +    +   Y  +I   C+       
Sbjct: 474  GGLSKA-AVSSILRGLIAGGKLRELQALIGWILGQGFIIDVYMYQELIISFCK------- 525

Query: 250  VGCFYRSFKDGYSPKLVAHLLYQLVR 173
                 + +  G    ++ H+L +++R
Sbjct: 526  -----KGYCRGLEMYIMCHILERMIR 546



 Score =  120 bits (302), Expect = 1e-24
 Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 7/344 (2%)
 Frame = -2

Query: 1090 EEALGILDQMLE-EECLPNAYTFTPIVQAYCSSGRIDKAKGLMNTMEIIGCPPNTVTYNV 914
            E AL +LD+M       P+A  FT    A+ S+ +   A  ++N M   G  P+T    V
Sbjct: 78   ERALHLLDEMRSLMGRRPDAACFTTAAAAFSSASQPGAALAVLNAMAADGVVPDTAACTV 137

Query: 913  LVEA-LCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKLGLADKSFDLFEVMLER 737
            LV    C++  FD    +++        PD +TYS  +  LC  G   ++  + ++MLE 
Sbjct: 138  LVGVYACRLHWFDAAYEVVRWMAANGVAPDVVTYSTLISGLCSAGRVAEALGVLDLMLEE 197

Query: 736  GLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAV 557
            G QPNA T   +L   C +    EAK LLE      +  S   YN ++  L     +  V
Sbjct: 198  GCQPNAHTYTPILHAYCTSGMIHEAKDLLETMVAAGFAPSTATYNVLVEALCKACAFEEV 257

Query: 556  LKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFD---SNGFVPNVMSYTTLIHY 386
             KL  +   KG T ++ T+S  +  L K G V  +  + D   S G  PN ++   L+  
Sbjct: 258  DKLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLALVDKMLSVGLRPNEITLNILLDG 317

Query: 385  SYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPK 206
                        L +  A      N + Y+ ++  LC ++R+L  V  F    K G +P 
Sbjct: 318  VCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLAVVKLFVDMVKKGIAPN 377

Query: 205  --LVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIK 80
                + +++ L + GKL E  CLL     + F  +V  +++LI+
Sbjct: 378  SWTFSIVIHSLCKLGKLHEALCLLG---SEEFVANVVTYNTLIR 418


>tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea mays]
          Length = 549

 Score =  474 bits (1221), Expect = e-131
 Identities = 241/440 (54%), Positives = 308/440 (70%)
 Frame = -2

Query: 1321 ASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAPD 1142
            +S+ +   AL V   M T G+ PDAAA TVLV +Y+C L  FDAAYEVVRWM   G A D
Sbjct: 109  SSASQPGAALAVLNAMATDGVMPDAAACTVLVGVYACRLHWFDAAYEVVRWMTANGVALD 168

Query: 1141 VVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLMN 962
            VVTYSTLI+GLC AGRV EALG+LD MLEE C PNA+T+TPI+ AYC+SG I +AK L+ 
Sbjct: 169  VVTYSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKELLE 228

Query: 961  TMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKLG 782
            TM   G  P+T TYNVLVEALCK  AF+EV+ LL++++ K W PDTITYS YMD LCK G
Sbjct: 229  TMIAAGFAPSTATYNVLVEALCKACAFNEVDALLEESSAKGWTPDTITYSTYMDGLCKDG 288

Query: 781  LADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNYN 602
               KSF L + ML  GL+PN +TLNILLD +CR S AW AK LLE SA+I W  +VVNYN
Sbjct: 289  RVHKSFALVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYN 348

Query: 601  TVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGFV 422
            TVM RL D  RW +V+KLFVD+ KKGI  NSWT SIV+HSL K G +  A  +  S  FV
Sbjct: 349  TVMRRLCDERRWLSVVKLFVDIVKKGIAPNSWTLSIVIHSLCKLGRLHEALCLIGSEEFV 408

Query: 421  PNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGC 242
             +V++Y TLI Y    GK ++ + L   M  + IAPN  TYS++I CLC++ ++L A+GC
Sbjct: 409  ADVVTYNTLIRYLNFLGKAYEAYLLLHHMIEKGIAPNDTTYSLLIDCLCKEGKFLVALGC 468

Query: 241  FYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
              R  + G S  +V+ +L  L+ GGKL+E+  L+ WIL QGF +DV I+  LI +FC+ G
Sbjct: 469  LNRCMEGGLSKAVVSSILRGLIAGGKLRELQALIGWILGQGFVLDVYIYQELIISFCKKG 528

Query: 61   YCRSSRIYEICRMLDKMLQI 2
            YCR   +Y +C +L++M+++
Sbjct: 529  YCRGLEMYIVCHILERMIRL 548



 Score =  147 bits (371), Expect = 1e-32
 Identities = 101/386 (26%), Positives = 182/386 (47%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L S+GR  EAL V + ML  G  P+A  +T ++  Y C  G    A E++  M+  G AP
Sbjct: 179  LCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAY-CTSGMIHEAKELLETMIAAGFAP 237

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
               TY+ L+  LC A    E   +L++   +   P+  T++  +   C  GR+ K+  L+
Sbjct: 238  STATYNVLVEALCKACAFNEVDALLEESSAKGWTPDTITYSTYMDGLCKDGRVHKSFALV 297

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            + M  +G  PN +T N+L++ +C+       + LL+ +    W  + + Y+  M  LC  
Sbjct: 298  DKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDE 357

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
                    LF  ++++G+ PN+ TL+I++  LC+  R  EA  L+      +++A VV Y
Sbjct: 358  RRWLSVVKLFVDIVKKGIAPNSWTLSIVIHSLCKLGRLHEALCLI---GSEEFVADVVTY 414

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAG--MVSLAKLVFDSN 431
            NT++  L+  G+      L   M +KGI  N  T+S+++  L K G  +V+L  L     
Sbjct: 415  NTLIRYLNFLGKAYEAYLLLHHMIEKGIAPNDTTYSLLIDCLCKEGKFLVALGCLNRCME 474

Query: 430  GFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEA 251
            G +   +  ++++      GK  ++  L   +  +    +   Y  +I   C+       
Sbjct: 475  GGLSKAV-VSSILRGLIAGGKLRELQALIGWILGQGFVLDVYIYQELIISFCK------- 526

Query: 250  VGCFYRSFKDGYSPKLVAHLLYQLVR 173
                 + +  G    +V H+L +++R
Sbjct: 527  -----KGYCRGLEMYIVCHILERMIR 547


>ref|XP_004962174.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Setaria italica]
          Length = 548

 Score =  473 bits (1217), Expect = e-131
 Identities = 240/441 (54%), Positives = 309/441 (70%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L+S+ +   AL V   M   G++PDAAA TVLV +Y+C L  FDAAYEV+RWM   G AP
Sbjct: 107  LSSASQPGAALAVLNAMAADGVAPDAAACTVLVGVYACHLRWFDAAYEVLRWMAANGVAP 166

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DVVTYSTLI+GLC AGRV EALG+LD MLEE C PNA+T+TPI+ AYC SG I +AK L+
Sbjct: 167  DVVTYSTLISGLCSAGRVAEALGVLDFMLEEGCQPNAHTYTPIMHAYCVSGMIHEAKELL 226

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
             TM   G  P+T TYNVLVEALCK GAF+EV+ LL++++   W PDTITYS YMD LCK 
Sbjct: 227  ETMVAAGFVPSTATYNVLVEALCKAGAFNEVDALLEESSAAGWTPDTITYSTYMDGLCKA 286

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G  DKSF L + ML  GL+PN +TLNILLD +CR S AW AK LLE SA+I W  +VVNY
Sbjct: 287  GRVDKSFALVDKMLSEGLRPNEITLNILLDGVCRRSTAWSAKCLLECSAEIGWHVNVVNY 346

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVM RL D  RW AV+KLF+DM KKG+  NSWTFSIVVHSL K G +  A  +  S  F
Sbjct: 347  NTVMRRLCDERRWLAVIKLFIDMVKKGMAPNSWTFSIVVHSLCKLGRLREAFCLLGSEDF 406

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
            V +V++Y TLI +    GK ++   +  +M  ++I PN IT S+++ CLCR+ ++L A+ 
Sbjct: 407  VADVVTYNTLIRHLSFLGKAYEAFLVLHEMIEKDITPNDITDSLVVDCLCREGKFLVALS 466

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
               RS +DG S   V+ ++  L+ GGKL E+  L+ WIL QGF +DV ++  LI AFC+ 
Sbjct: 467  YLNRSLEDGLSRSAVSSIVRGLIAGGKLHELHTLIRWILGQGFILDVYMYQELIIAFCKK 526

Query: 64   GYCRSSRIYEICRMLDKMLQI 2
            GYCR + +Y++   L++ML++
Sbjct: 527  GYCRGTEMYKVSHTLERMLRL 547


>ref|XP_006655290.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
            mitochondrial-like [Oryza brachyantha]
          Length = 426

 Score =  469 bits (1206), Expect = e-129
 Identities = 235/425 (55%), Positives = 302/425 (71%)
 Frame = -2

Query: 1276 MLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAPDVVTYSTLIAGLCWAG 1097
            M   G+ PDAAA TVLV +Y+C L QFD+AY VV WM   G APDVVTYSTLI+GLC AG
Sbjct: 1    MAADGVKPDAAACTVLVGVYACRLQQFDSAYGVVHWMGANGVAPDVVTYSTLISGLCSAG 60

Query: 1096 RVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLMNTMEIIGCPPNTVTYN 917
            +V EALG+LD MLEE   PNA+T+TPI+ AYC+SGR+ +AK L+NTM   GC P+T TYN
Sbjct: 61   QVAEALGVLDLMLEEGYQPNAHTYTPIMHAYCASGRMHEAKRLLNTMITSGCVPSTATYN 120

Query: 916  VLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKLGLADKSFDLFEVMLER 737
            VLVEALCK+ AF EV+ LL++++ K W PD ITYS YMD LCK G  DKSF L E ML  
Sbjct: 121  VLVEALCKVRAFKEVDALLEESSAKGWAPDAITYSSYMDGLCKAGRIDKSFALVEKMLSN 180

Query: 736  GLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAV 557
            GLQPN VTLNILLD +CR+S AW AK LLE S ++ W  +VVNYNTVM RL D  RW +V
Sbjct: 181  GLQPNEVTLNILLDGVCRSSTAWSAKHLLECSTELGWNVNVVNYNTVMRRLCDERRWLSV 240

Query: 556  LKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYI 377
            +KLF DM KKGI  NSWTF+IV+HSL K G +  A  + +S  FV  V++Y TLI +  +
Sbjct: 241  VKLFTDMTKKGIAQNSWTFNIVIHSLCKLGRLHKAFCLLESKEFVATVITYNTLIRHRSV 300

Query: 376  AGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVA 197
             GK ++V  L  KM  E IAPN ITYS++I CLCR+K++L A+ C Y+S +  +      
Sbjct: 301  TGKANEVFLLLHKMIGEGIAPNDITYSLVIDCLCREKKFLVALCCIYQSLEVDFFQSAFL 360

Query: 196  HLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGYCRSSRIYEICRMLD 17
             ++  L+ GG L E+  L+  +L QGF I+V I+  LIK FC+ GYC+S  +Y++C +L+
Sbjct: 361  SIVRGLIVGGMLGELHTLIGCVLGQGFIIEVYIYQELIKVFCKNGYCQSIEMYKVCYILE 420

Query: 16   KMLQI 2
            ++L++
Sbjct: 421  RLLRL 425



 Score =  147 bits (372), Expect = 7e-33
 Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 2/354 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L S+G+  EAL V + ML  G  P+A  +T ++  Y C  G+   A  ++  M+  GC P
Sbjct: 56   LCSAGQVAEALGVLDLMLEEGYQPNAHTYTPIMHAY-CASGRMHEAKRLLNTMITSGCVP 114

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
               TY+ L+  LC     +E   +L++   +   P+A T++  +   C +GRIDK+  L+
Sbjct: 115  STATYNVLVEALCKVRAFKEVDALLEESSAKGWAPDAITYSSYMDGLCKAGRIDKSFALV 174

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              M   G  PN VT N+L++ +C+       + LL+ +T   W  + + Y+  M  LC  
Sbjct: 175  EKMLSNGLQPNEVTLNILLDGVCRSSTAWSAKHLLECSTELGWNVNVVNYNTVMRRLCDE 234

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
                    LF  M ++G+  N+ T NI++  LC+  R  +A  LLE     +++A+V+ Y
Sbjct: 235  RRWLSVVKLFTDMTKKGIAQNSWTFNIVIHSLCKLGRLHKAFCLLESK---EFVATVITY 291

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSL--SKAGMVSLAKLVFDSN 431
            NT++   S  G+   V  L   M  +GI  N  T+S+V+  L   K  +V+L   ++ S 
Sbjct: 292  NTLIRHRSVTGKANEVFLLLHKMIGEGIAPNDITYSLVIDCLCREKKFLVALC-CIYQSL 350

Query: 430  GFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRD 269
                   ++ +++    + G   ++H L   +  +        Y  +I   C++
Sbjct: 351  EVDFFQSAFLSIVRGLIVGGMLGELHTLIGCVLGQGFIIEVYIYQELIKVFCKN 404


>gb|EEE63625.1| hypothetical protein OsJ_18442 [Oryza sativa Japonica Group]
          Length = 390

 Score =  437 bits (1123), Expect = e-120
 Identities = 218/389 (56%), Positives = 283/389 (72%)
 Frame = -2

Query: 1168 MVKCGCAPDVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGR 989
            MV  G APDVVTYSTLI+GLC AG+V EALG+LD MLEE C PNA+T+TPIV AYC+ GR
Sbjct: 1    MVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGR 60

Query: 988  IDKAKGLMNTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSI 809
            I +AK L+NTM   G  P+T TYNVLVEALCK+GAF+EV+ LL+++T K W PD ITYS 
Sbjct: 61   IHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSS 120

Query: 808  YMDNLCKLGLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIK 629
            YMD LCK G  DKSF L + ML  GLQP+ VTLNILLD +CR+S AW AKRLLE SA++ 
Sbjct: 121  YMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELG 180

Query: 628  WIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAK 449
            W A+VVNYNTVM +L D  RW +V+KLF DM KKGI  NSWTF+IVVHSL K G +  A 
Sbjct: 181  WDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKAL 240

Query: 448  LVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRD 269
             +  S  FV  V++Y TLI +  I+G+ ++V  L  +M    IAPN ITYS++I CLCR+
Sbjct: 241  FLLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCRE 300

Query: 268  KRYLEAVGCFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHS 89
            +++L A+ CFY+S +D + P     ++  L+ GG L ++  L+  +L QGF I+V I+  
Sbjct: 301  EKFLVALCCFYQSLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQE 360

Query: 88   LIKAFCRTGYCRSSRIYEICRMLDKMLQI 2
            LIKA C+ GYC+S  +Y++C +L++ML++
Sbjct: 361  LIKALCKNGYCQSVEMYKVCHILERMLRL 389



 Score =  154 bits (389), Expect = 8e-35
 Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 3/355 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L S+G+  EAL V + ML  G  P+A  +T +V  Y C  G+   A  ++  M+  G AP
Sbjct: 20   LCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY-CTGGRIHEAKRLLNTMIASGFAP 78

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
               TY+ L+  LC  G  EE   +L++   +   P+  T++  +   C +GRIDK+  L+
Sbjct: 79   STATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALV 138

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            + M   G  P+ VT N+L++ +C+       + LL+ +    W  + + Y+  M  LC  
Sbjct: 139  DKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCDE 198

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
                    LF  M ++G+ PN+ T NI++  LC+  R  +A  LL      +++A+V+ Y
Sbjct: 199  HRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLLRSK---EFVATVITY 255

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFD---S 434
            NT++  LS  G    V  L   M + GI  N  T+S+V+  L +     +A   F     
Sbjct: 256  NTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFLVALCCFYQSLE 315

Query: 433  NGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRD 269
            + F P+  ++ ++I    + G    +H L   +  +        Y  +I  LC++
Sbjct: 316  DDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQELIKALCKN 368


>ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like, partial [Brachypodium distachyon]
          Length = 564

 Score =  409 bits (1052), Expect = e-111
 Identities = 207/439 (47%), Positives = 283/439 (64%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR  EA   F+EML  G++P+ ++  +LVKL+S    +FD AY+ +  M + G   
Sbjct: 123  LAEAGRVAEAHDAFDEMLAAGVAPNVSSLNILVKLHSWRSSRFDLAYKEILRMRELGVEA 182

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTL+ GLC  GR  EA G+L+ MLEE C P   T+TPIVQ YC  GR+++A  +M
Sbjct: 183  DVGTYSTLVTGLCRVGRTGEAWGVLEWMLEEGCYPMVQTYTPIVQGYCHEGRVEEAMEVM 242

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
             TME  GCPPN VTYNVL+ ALC    FDEV+ +L ++  K W P T+TY+ +M+ LCK 
Sbjct: 243  ATMERAGCPPNVVTYNVLIRALCDAARFDEVKQVLAESRSKDWTPSTVTYNTFMNGLCKK 302

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G+A ++ +   VML  GL P+  TL+ILL+CLC  SR  +A  LLERS  +KW A VV Y
Sbjct: 303  GMAKEALEQLNVMLGEGLDPSDFTLSILLNCLCHDSRVSDAIDLLERSTSLKWYAGVVGY 362

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMSRL   G W  VLKL  DM KKGIT N+ TF++ + SL   G +S+AK +  S GF
Sbjct: 363  NTVMSRLCGMGNWMGVLKLLTDMVKKGITPNTRTFNVFIRSLCFGGKLSIAKSLLHSQGF 422

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
            V N+++Y TLI++ Y   K  +V HL   MA+E IAP+ +TY+V+I  LCRD+++  A  
Sbjct: 423  VANIVTYNTLIYWFYYYKKLSEVQHLISDMAVEKIAPDEVTYTVIIDGLCRDEKFDMATS 482

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CF  S + G S  L+A L+ +L   GK+ E+  +   + R+GF  D CIF   I++FCR 
Sbjct: 483  CFLESLERGLSRDLLAVLINRLAHSGKIWEIFRVFQGMEREGFLPDNCIFDRTIRSFCRA 542

Query: 64   GYCRSSRIYEICRMLDKML 8
            G+C    I+++  +LD ML
Sbjct: 543  GFCHDRDIFKLNLILDTML 561


>gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
          Length = 538

 Score =  395 bits (1014), Expect = e-107
 Identities = 206/440 (46%), Positives = 287/440 (65%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR  EAL  F+EML  G++P+A++  +L+K+++    +FD A+E++    K G  P
Sbjct: 104  LAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHAR-RSEFDLAWELIH---KSGVEP 159

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTLIAGLC AG+V EA G+LD MLE+ C P   T+TPIVQAYC  GRI +AK LM
Sbjct: 160  DVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLM 219

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              ME +GC PN VTYNVL+ ALC    FDEVE +L +++ K W+P T+TY+IYM+ LCK 
Sbjct: 220  AEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKK 279

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G A ++ +L +VML  GL+P A T +ILL+CLC +SR  +A  LLERS ++KW A VV Y
Sbjct: 280  GKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAY 339

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMS L + G+W  ++KL  DM KKGI  N+ TF+I++ SL   G  SLAK +  S GF
Sbjct: 340  NTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSQGF 399

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
              NV++Y  L+H+ Y  GK  + + L   M  +NIAP+ +TY+++I  LCR++++  A  
Sbjct: 400  AANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATA 459

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CF +S   G S  ++  LL +LV   K+ E+  + D    + F  D  +F   I+ FCR 
Sbjct: 460  CFLKSLTSGLSMDVLTVLLNRLVYADKIWEINRIFD---GKDFVPDHHVFDLTIRTFCRA 516

Query: 64   GYCRSSRIYEICRMLDKMLQ 5
            GYC     Y++  +LD ML+
Sbjct: 517  GYCHHRTFYKLNLILDAMLK 536



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 44/331 (13%)
 Frame = -2

Query: 922  YNVLVEALCKIGAFDEVETLLKDATLKAWQ-------PDTITYSIYMDNLCKLGLADKSF 764
            YNV ++AL   G  DEV  +  +    A         P+ + Y+  ++ L + G   ++ 
Sbjct: 55   YNVAMKALALAGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114

Query: 763  DLFEVMLERGLQPNAVTLNILLDC--------------------------------LCRA 680
              F+ ML  G+ PNA + NIL+                                  LCRA
Sbjct: 115  KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRA 174

Query: 679  SRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTF 500
             +  EA  +L+   +      V  Y  ++      GR      L  +M + G   N  T+
Sbjct: 175  GKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTY 234

Query: 499  SIVVHSL---SKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAM 329
            ++++ +L    K   V    +   +  + P+ ++Y   ++     GK  +   L   M  
Sbjct: 235  NVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLG 294

Query: 328  ENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAH--LLYQLVRGGKLKE 155
            E + P   T+S+++ CLC   R L+A+    RS +  +   +VA+  ++  L   GK + 
Sbjct: 295  EGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRG 354

Query: 154  VACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
            +  LL  ++++G   +   F+ LI++ C  G
Sbjct: 355  IMKLLTDMIKKGIEPNTRTFNILIRSLCVGG 385



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 47/260 (18%)
 Frame = -2

Query: 640 ADIKWIAS----------VVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIV 491
           +++KW A+          V+ YNT+++ L++ GR    LK F +M   G+  N+ + +I+
Sbjct: 76  SELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNIL 135

Query: 490 VHSLSKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPN 311
           +   ++     LA  +   +G  P+V +Y+TLI     AGK  +   +   M  +N  P 
Sbjct: 136 IKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPM 195

Query: 310 WITYSVMITCLCRDKRYLEA---------VGC--------------------------FY 236
             TY+ ++   CRD R +EA         +GC                            
Sbjct: 196 VQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLM 255

Query: 235 RSFKDGYSPKLVAHLLYQ--LVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
            S    + P  V + +Y   L + GK KE   LLD +L +G       +  L+       
Sbjct: 256 ESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCL---- 311

Query: 61  YCRSSRIYEICRMLDKMLQI 2
            C SSR+ +   +L++  ++
Sbjct: 312 -CHSSRLLDAIYLLERSTEL 330


>ref|XP_006665044.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g09900-like, partial [Oryza brachyantha]
          Length = 541

 Score =  394 bits (1013), Expect = e-107
 Identities = 205/440 (46%), Positives = 285/440 (64%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR EEAL   +EML  G++P+A++  +L+K+++    +FD A+E++    K    P
Sbjct: 107  LAEAGRTEEALRALDEMLASGVAPNASSHNILIKMHAR-RSEFDLAWELIH---KSEMEP 162

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            D  TYSTLIAGLC  G+V EA G+LD MLE+ CLP  +T+TPIVQAYC  GRI++AK LM
Sbjct: 163  DAATYSTLIAGLCRVGKVAEAWGVLDWMLEKNCLPMVHTYTPIVQAYCREGRIEEAKLLM 222

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              ME +GC PN VTYNVL+ ALC  G FDEVE +L D+  K W P T+TY+IYM+ LCK 
Sbjct: 223  VEMERLGCLPNVVTYNVLIRALCDSGRFDEVEQILVDSRTKDWNPSTVTYNIYMNGLCKK 282

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G   ++ +  +VML  G+ P A TL+ILL+CLC  SR  +A  LLERS ++KW A VV Y
Sbjct: 283  GKTKEALEQLDVMLGEGMDPTAYTLSILLNCLCHDSRLLDAIYLLERSTELKWHAGVVAY 342

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMSRL + G+W ++LKL  DM KKGI  N+ TF+I++HSL   G  SLAK +  S GF
Sbjct: 343  NTVMSRLCEMGKWMSILKLLTDMIKKGIEPNTRTFNILIHSLCVVGKFSLAKSLIQSEGF 402

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
              +V++Y TL+H+SY  GK    + L   M  +NIA + +TY+++I  LCR+ ++  A G
Sbjct: 403  AADVVTYNTLLHWSYHCGKLTGANRLISAMEEKNIALDEVTYTIIIDGLCREGKFDAATG 462

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
             F +S K G S  ++  LL +L    ++ E+  + D    + F  D  +F+  I+  CR 
Sbjct: 463  YFLKSLKIGLSMDVLTVLLNRLACADRIWEIHRIFD---EKDFIPDHLVFNLTIRTLCRA 519

Query: 64   GYCRSSRIYEICRMLDKMLQ 5
             YC     Y++  +LDKML+
Sbjct: 520  SYCHYRDFYKLNLILDKMLE 539



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 44/331 (13%)
 Frame = -2

Query: 922  YNVLVEALCKIGAFDEVETL-------LKDATLKAWQPDTITYSIYMDNLCKLGLADKSF 764
            YNV ++AL   G  DEV  +       L DA      P+ + Y+  ++ L + G  +++ 
Sbjct: 58   YNVAMKALALSGDVDEVLAVFAELRRSLADAGDGGAAPNVLCYNTLVNALAEAGRTEEAL 117

Query: 763  DLFEVMLERGLQPNAVTLNILLDC--------------------------------LCRA 680
               + ML  G+ PNA + NIL+                                  LCR 
Sbjct: 118  RALDEMLASGVAPNASSHNILIKMHARRSEFDLAWELIHKSEMEPDAATYSTLIAGLCRV 177

Query: 679  SRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTF 500
             +  EA  +L+   +   +  V  Y  ++      GR      L V+M + G   N  T+
Sbjct: 178  GKVAEAWGVLDWMLEKNCLPMVHTYTPIVQAYCREGRIEEAKLLMVEMERLGCLPNVVTY 237

Query: 499  SIVVHSLSKAGMV-SLAKLVFDS--NGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAM 329
            ++++ +L  +G    + +++ DS    + P+ ++Y   ++     GK  +       M  
Sbjct: 238  NVLIRALCDSGRFDEVEQILVDSRTKDWNPSTVTYNIYMNGLCKKGKTKEALEQLDVMLG 297

Query: 328  ENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAH--LLYQLVRGGKLKE 155
            E + P   T S+++ CLC D R L+A+    RS +  +   +VA+  ++ +L   GK   
Sbjct: 298  EGMDPTAYTLSILLNCLCHDSRLLDAIYLLERSTELKWHAGVVAYNTVMSRLCEMGKWMS 357

Query: 154  VACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
            +  LL  ++++G   +   F+ LI + C  G
Sbjct: 358  ILKLLTDMIKKGIEPNTRTFNILIHSLCVVG 388



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
 Frame = -2

Query: 667 EAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITAN-------- 512
           E +R L  + D     +V+ YNT+++ L++ GR    L+   +M   G+  N        
Sbjct: 80  ELRRSLADAGDGGAAPNVLCYNTLVNALAEAGRTEEALRALDEMLASGVAPNASSHNILI 139

Query: 511 -----------SW-------------TFSIVVHSLSKAGMVSLAKLVFD---SNGFVPNV 413
                      +W             T+S ++  L + G V+ A  V D       +P V
Sbjct: 140 KMHARRSEFDLAWELIHKSEMEPDAATYSTLIAGLCRVGKVAEAWGVLDWMLEKNCLPMV 199

Query: 412 MSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGCFYR 233
            +YT ++      G+  +   L  +M      PN +TY+V+I  LC   R+ E       
Sbjct: 200 HTYTPIVQAYCREGRIEEAKLLMVEMERLGCLPNVVTYNVLIRALCDSGRFDEVEQILVD 259

Query: 232 SFKDGYSPKLVAHLLYQ--LVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGY 59
           S    ++P  V + +Y   L + GK KE    LD +L +G  +D   +   I   C    
Sbjct: 260 SRTKDWNPSTVTYNIYMNGLCKKGKTKEALEQLDVMLGEG--MDPTAYTLSILLNC---L 314

Query: 58  CRSSRIYEICRMLDKMLQI 2
           C  SR+ +   +L++  ++
Sbjct: 315 CHDSRLLDAIYLLERSTEL 333


>gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
          Length = 538

 Score =  393 bits (1009), Expect = e-106
 Identities = 205/440 (46%), Positives = 287/440 (65%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR  EAL  F+EML  G++P+A++  +L+K+++    +FD A+E++    K G  P
Sbjct: 104  LAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHAR-RSEFDLAWELIH---KSGVEP 159

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTLIAGLC AG++ EA G+LD MLE+ C P   T+TPIVQAYC  GRI +AK LM
Sbjct: 160  DVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLM 219

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              ME +GC PN VTYNVL+ ALC    FDEVE +L +++ K W+P T+TY+IYM+ LCK 
Sbjct: 220  AEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKK 279

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G A ++ +L +VML  GL+P A T +ILL+CLC +SR  +A  LLERS ++KW A VV Y
Sbjct: 280  GKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAY 339

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMS L + G+W  ++KL  DM KKGI  N+ TF+I++ SL   G  SLAK +  S GF
Sbjct: 340  NTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSLGF 399

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
              NV++Y  L+H+ Y  GK  + + L   M  +NIAP+ +TY+++I  LCR++++  A  
Sbjct: 400  AANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATA 459

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CF +S   G S  ++  LL +LV   K+ E+  + D    + F  D  +F   I+ FCR 
Sbjct: 460  CFLKSLTSGLSMDVLTVLLNRLVYADKIWEINRIFD---GKDFVPDHHVFDLTIRTFCRV 516

Query: 64   GYCRSSRIYEICRMLDKMLQ 5
            GYC     Y++  +LD ML+
Sbjct: 517  GYCHYRTFYKLNLILDAMLK 536



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 44/331 (13%)
 Frame = -2

Query: 922  YNVLVEALCKIGAFDEVETLLKDATLKAWQ-------PDTITYSIYMDNLCKLGLADKSF 764
            YNV ++AL   G  DEV  +  +    A         P+ + Y+  ++ L + G   ++ 
Sbjct: 55   YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114

Query: 763  DLFEVMLERGLQPNAVTLNILLDCLCRASR---AWE-----------------------A 662
              F+ ML  G+ PNA + NIL+    R S    AWE                       A
Sbjct: 115  KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRA 174

Query: 661  KRLLERSADIKWIAS------VVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTF 500
             +++E    + W+        V  Y  ++      GR      L  +M + G   N  T+
Sbjct: 175  GKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTY 234

Query: 499  SIVVHSL---SKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAM 329
            ++++ +L    K   V    +   +  + P+ ++Y   ++     GK  +   L   M  
Sbjct: 235  NVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLG 294

Query: 328  ENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAH--LLYQLVRGGKLKE 155
            E + P   T+S+++ CLC   R L+A+    RS +  +   +VA+  ++  L   GK + 
Sbjct: 295  EGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRG 354

Query: 154  VACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
            +  LL  ++++G   +   F+ LI++ C  G
Sbjct: 355  IMKLLTDMIKKGIEPNTRTFNILIRSLCVGG 385



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
 Frame = -2

Query: 667 EAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVV 488
           E KR      D     +V+ YNT+++ L++ GR    LK F +M   G+  N+ + +I++
Sbjct: 77  ELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILI 136

Query: 487 HSLSKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNW 308
              ++     LA  +   +G  P+V +Y+TLI     AGK  +   +   M  +N  P  
Sbjct: 137 KMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMV 196

Query: 307 ITYSVMITCLCRDKRYLEA---------VGC--------------------------FYR 233
            TY+ ++   CRD R +EA         +GC                             
Sbjct: 197 QTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLME 256

Query: 232 SFKDGYSPKLVAHLLYQ--LVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGY 59
           S    + P  V + +Y   L + GK KE   LLD +L +G       +  L+        
Sbjct: 257 SSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCL----- 311

Query: 58  CRSSRIYEICRMLDKMLQI 2
           C SSR+ +   +L++  ++
Sbjct: 312 CHSSRLLDAIYLLERSTEL 330


>ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
            gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa
            Japonica Group]
          Length = 542

 Score =  393 bits (1009), Expect = e-106
 Identities = 205/440 (46%), Positives = 287/440 (65%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR  EAL  F+EML  G++P+A++  +L+K+++    +FD A+E++    K G  P
Sbjct: 108  LAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHAR-RSEFDLAWELIH---KSGVEP 163

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTLIAGLC AG++ EA G+LD MLE+ C P   T+TPIVQAYC  GRI +AK LM
Sbjct: 164  DVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLM 223

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              ME +GC PN VTYNVL+ ALC    FDEVE +L +++ K W+P T+TY+IYM+ LCK 
Sbjct: 224  AEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKK 283

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G A ++ +L +VML  GL+P A T +ILL+CLC +SR  +A  LLERS ++KW A VV Y
Sbjct: 284  GKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAY 343

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMS L + G+W  ++KL  DM KKGI  N+ TF+I++ SL   G  SLAK +  S GF
Sbjct: 344  NTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSLGF 403

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
              NV++Y  L+H+ Y  GK  + + L   M  +NIAP+ +TY+++I  LCR++++  A  
Sbjct: 404  AANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATA 463

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
            CF +S   G S  ++  LL +LV   K+ E+  + D    + F  D  +F   I+ FCR 
Sbjct: 464  CFLKSLTSGLSMDVLTVLLNRLVYADKIWEINRIFD---GKDFVPDHHVFDLTIRTFCRV 520

Query: 64   GYCRSSRIYEICRMLDKMLQ 5
            GYC     Y++  +LD ML+
Sbjct: 521  GYCHYRTFYKLNLILDAMLK 540



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 44/331 (13%)
 Frame = -2

Query: 922  YNVLVEALCKIGAFDEVETLLKDATLKAWQ-------PDTITYSIYMDNLCKLGLADKSF 764
            YNV ++AL   G  DEV  +  +    A         P+ + Y+  ++ L + G   ++ 
Sbjct: 59   YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 118

Query: 763  DLFEVMLERGLQPNAVTLNILLDCLCRASR---AWE-----------------------A 662
              F+ ML  G+ PNA + NIL+    R S    AWE                       A
Sbjct: 119  KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRA 178

Query: 661  KRLLERSADIKWIAS------VVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTF 500
             +++E    + W+        V  Y  ++      GR      L  +M + G   N  T+
Sbjct: 179  GKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTY 238

Query: 499  SIVVHSL---SKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAM 329
            ++++ +L    K   V    +   +  + P+ ++Y   ++     GK  +   L   M  
Sbjct: 239  NVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLG 298

Query: 328  ENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAH--LLYQLVRGGKLKE 155
            E + P   T+S+++ CLC   R L+A+    RS +  +   +VA+  ++  L   GK + 
Sbjct: 299  EGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRG 358

Query: 154  VACLLDWILRQGFTIDVCIFHSLIKAFCRTG 62
            +  LL  ++++G   +   F+ LI++ C  G
Sbjct: 359  IMKLLTDMIKKGIEPNTRTFNILIRSLCVGG 389



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
 Frame = -2

Query: 667 EAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVV 488
           E KR      D     +V+ YNT+++ L++ GR    LK F +M   G+  N+ + +I++
Sbjct: 81  ELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILI 140

Query: 487 HSLSKAGMVSLAKLVFDSNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNW 308
              ++     LA  +   +G  P+V +Y+TLI     AGK  +   +   M  +N  P  
Sbjct: 141 KMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMV 200

Query: 307 ITYSVMITCLCRDKRYLEA---------VGC--------------------------FYR 233
            TY+ ++   CRD R +EA         +GC                             
Sbjct: 201 QTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLME 260

Query: 232 SFKDGYSPKLVAHLLYQ--LVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGY 59
           S    + P  V + +Y   L + GK KE   LLD +L +G       +  L+        
Sbjct: 261 SSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCL----- 315

Query: 58  CRSSRIYEICRMLDKMLQI 2
           C SSR+ +   +L++  ++
Sbjct: 316 CHSSRLLDAIYLLERSTEL 334


>gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]
          Length = 548

 Score =  374 bits (959), Expect = e-101
 Identities = 198/440 (45%), Positives = 272/440 (61%), Gaps = 1/440 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR EEA   F+EML  G++P+A++  +LVKL+S    +FD AY+V+  + + G   
Sbjct: 106  LAEAGRVEEAHNAFDEMLATGVAPNASSLNILVKLHSWRSARFDLAYQVIIRLQELGVEA 165

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTL+ GLC  GRV EA G+L+ MLE  C P   T+TPIVQ YC  GR+D+AK LM
Sbjct: 166  DVGTYSTLVTGLCRVGRVGEAWGVLEWMLEVGCRPMVQTYTPIVQGYCREGRVDEAKELM 225

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            +TME  GCPPN VTYNVL+ ALC    FDEV  +L D+  K W+P T+TY+ +M+ LCK 
Sbjct: 226  STMESAGCPPNVVTYNVLIRALCDAARFDEVRQVLMDSRTKDWKPSTVTYNTFMNGLCKK 285

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G+A ++ +  +VML  GL P   TL+ILL+CL    R  +A  LLER+  +K  A VV Y
Sbjct: 286  GMAKEALEQLDVMLGEGLDPTDFTLSILLNCLSHDKRIHDAVCLLERNTSLKCYAGVVAY 345

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMSRL + G W  VLKL  DM K+G+  N+ TF+IV+ SL      S+AK +  + GF
Sbjct: 346  NTVMSRLGEMGHWMGVLKLLTDMIKRGVMPNTRTFNIVIRSLCFRRKFSIAKSLASNQGF 405

Query: 424  VPNVMSYTTLIHY-SYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAV 248
              NV++Y TLI++  Y + K  +V  L   M    IAP+ +TY++++  LCRD  +  A 
Sbjct: 406  AANVVTYNTLIYFVFYYSRKLSEVKDLIFDMTAVRIAPDEVTYTIIVDGLCRDGFFDTAT 465

Query: 247  GCFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCR 68
              F  S + G S  L A L  +L   GK+ E   +   +  +GF  D  IF   I+ FCR
Sbjct: 466  SYFLESLEIGLSRDLFAVLTNRLAHNGKIWETIHIFKGMEEKGFIPDNSIFDLTIRIFCR 525

Query: 67   TGYCRSSRIYEICRMLDKML 8
             GYC  + ++++  +LD ML
Sbjct: 526  AGYCHDTDMFKLNFVLDTML 545



 Score = 81.3 bits (199), Expect = 9e-13
 Identities = 90/409 (22%), Positives = 155/409 (37%), Gaps = 83/409 (20%)
 Frame = -2

Query: 1015 VQAYCSSGRIDKAKGLMNTMEII------GCPPNTVTYNVLVEALCKIG-------AFDE 875
            ++A   +G +D+   L   +           PP+ + YN LV AL + G       AFDE
Sbjct: 62   MKALARAGEVDQVLALFTELRASRTGPGGASPPSVLCYNTLVNALAEAGRVEEAHNAFDE 121

Query: 874  V---------ETLLKDATLKAW--------------------QPDTITYSIYMDNLCKLG 782
            +          +L     L +W                    + D  TYS  +  LC++G
Sbjct: 122  MLATGVAPNASSLNILVKLHSWRSARFDLAYQVIIRLQELGVEADVGTYSTLVTGLCRVG 181

Query: 781  LADKSFDLFEVMLE-----------------------------------RGLQPNAVTLN 707
               +++ + E MLE                                    G  PN VT N
Sbjct: 182  RVGEAWGVLEWMLEVGCRPMVQTYTPIVQGYCREGRVDEAKELMSTMESAGCPPNVVTYN 241

Query: 706  ILLDCLCRASRAWEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKK 527
            +L+  LC A+R  E +++L  S    W  S V YNT M+ L   G     L+    M  +
Sbjct: 242  VLIRALCDAARFDEVRQVLMDSRTKDWKPSTVTYNTFMNGLCKKGMAKEALEQLDVMLGE 301

Query: 526  GITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGFV---PNVMSYTTLIHYSYIAGKEHDV 356
            G+    +T SI+++ LS    +  A  + + N  +     V++Y T++      G    V
Sbjct: 302  GLDPTDFTLSILLNCLSHDKRIHDAVCLLERNTSLKCYAGVVAYNTVMSRLGEMGHWMGV 361

Query: 355  HHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAH---LLY 185
              L   M    + PN  T++++I  LC  +++  A      +   G++  +V +   + +
Sbjct: 362  LKLLTDMIKRGVMPNTRTFNIVIRSLCFRRKFSIAKSL---ASNQGFAANVVTYNTLIYF 418

Query: 184  QLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRTGYCRSSRIY 38
                  KL EV  L+  +       D   +  ++   CR G+  ++  Y
Sbjct: 419  VFYYSRKLSEVKDLIFDMTAVRIAPDEVTYTIIVDGLCRDGFFDTATSY 467


>ref|XP_004952365.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            isoform X1 [Setaria italica]
          Length = 625

 Score =  372 bits (955), Expect = e-100
 Identities = 194/437 (44%), Positives = 279/437 (63%), Gaps = 1/437 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L   GRA E   VF+EML  G++P+ ++F +LVKLY+    +F  AY+ +  M      P
Sbjct: 170  LVEDGRAAETRKVFDEMLATGVAPNVSSFNILVKLYAWRTVEFHLAYKEIHGMRVHKLEP 229

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTL+ GLC  G+++EA G+LD ML+E C P  +T+TPIVQ YC  GRI++A+ L+
Sbjct: 230  DVSTYSTLVTGLCQVGKLDEAWGVLDWMLQEGCCPMVHTYTPIVQGYCREGRIEEARKLI 289

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            + ME  GCPPN VTYNVL+ ALC    FDEV+ +L +  +K  +P+T+TY+IYMD L K 
Sbjct: 290  DFMEDSGCPPNAVTYNVLIRALCDDARFDEVKQVLAEIKMKGQKPNTVTYNIYMDALSKK 349

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G+A ++   FE M   GL P A TL+I+L+CLC  SR  +A  LLERS ++ W A+V  Y
Sbjct: 350  GMAKEALQQFEDMQGEGLYPTAFTLSIILNCLCCNSRFSQAISLLERSTELNWCAAVAAY 409

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMSRL D  R  AVL+L VDM KKGI  N+ T++I++ SL   G +S+AK +  +  F
Sbjct: 410  NTVMSRLCDTDRCSAVLELLVDMIKKGIIPNTRTYNILIQSLCMDGKLSVAKNLVYNQRF 469

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMA-MENIAPNWITYSVMITCLCRDKRYLEAV 248
              NV++Y TLIH+ Y +G   +  +LF  M  + NIAP+ +TY++M+  LCR  ++ +A 
Sbjct: 470  HANVVTYNTLIHWFYYSGIVSEAEYLFAYMTKVANIAPDEVTYTIMVDGLCRQGKFDQAT 529

Query: 247  GCFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCR 68
              F  S K+  S  L+  L+ +L R  ++  +    + I RQGF  D  IF   I++FCR
Sbjct: 530  DFFKESLKNRLSKDLLTALINRLARSNRIGNILVAFEEIERQGFVRDYMIFSDTIRSFCR 589

Query: 67   TGYCRSSRIYEICRMLD 17
             G+ + + I+++  +LD
Sbjct: 590  VGFRQHTNIFDLQFLLD 606


>gb|EMT18492.1| hypothetical protein F775_20328 [Aegilops tauschii]
          Length = 542

 Score =  365 bits (937), Expect = 2e-98
 Identities = 194/441 (43%), Positives = 268/441 (60%), Gaps = 2/441 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L  +GR ++A   F EML  G +P+A++  +L+KL+S      D+ Y+ +  M + G  P
Sbjct: 99   LVEAGRVKDAHDAFGEMLAAGGAPNASSCNILLKLHSWTSDDDDSPYKTILSMREAGVEP 158

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV TYSTLI GLC  GR+ EA G+L+ MLE+ C P  +T+TPIVQ YC  GR+ +A  LM
Sbjct: 159  DVSTYSTLITGLCRVGRLPEAWGVLECMLEQGCRPMVHTYTPIVQGYCREGRVGEAMDLM 218

Query: 964  NTME-IIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCK 788
              ME   GCPPN VTYNVL+ ALC  G F+EV+ LL ++  K W P  +TY+ +M+ LC+
Sbjct: 219  AMMEKCAGCPPNVVTYNVLIRALCDAGQFNEVKQLLTESRTKGWTPSIVTYNTFMNGLCQ 278

Query: 787  LGLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVN 608
             G A ++  L  VML +GL P   TL+ILL+CLC ASR   A+ LLERS   +W A VV 
Sbjct: 279  KGKAKEALVLLGVMLGKGLDPTDFTLSILLNCLCHASRISHARYLLERSTSSRWYAGVVA 338

Query: 607  YNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNG 428
            YNTVM RL + G W  VLKL  DM KKG+  N+ TF+IV+ SL      S AK +  + G
Sbjct: 339  YNTVMGRLCEMGHWRGVLKLLTDMIKKGVMPNTRTFNIVIRSLCIGRKCSAAKSLVCNKG 398

Query: 427  FVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAV 248
            F  NV++Y TLI + +   K  +V HL   MA   IA + +TY++ +  LCRD  + +A 
Sbjct: 399  FAANVVTYNTLIDWFFYHRKLSEVGHLLSDMAAGKIAVDEVTYTIFVVRLCRDGNFAKAS 458

Query: 247  GCFYRSFKDGYSPKLVAHLLYQLVRGGKLKE-VACLLDWILRQGFTIDVCIFHSLIKAFC 71
             CF +S ++G S  L+  L+ +L   GK+ E +    +   R+G ++D  IF   I+ FC
Sbjct: 459  SCFLKSLENGLSMDLLGVLINRLAYSGKIPETIRIFQNMRERKGLSLDNSIFDLTIERFC 518

Query: 70   RTGYCRSSRIYEICRMLDKML 8
            R GYC    I+ +  +LD ML
Sbjct: 519  RAGYCHDKYIHNLNSILDAML 539



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 43/335 (12%)
 Frame = -2

Query: 919  NVLVEALCKIGAFDEVETLLKDATLKA-WQPDTITYSIYMDNLCKLGLADKSFDLFEVML 743
            NV ++AL + G  D+V  L + A L+A   P  ++Y+  M+ L + G    + D F  ML
Sbjct: 59   NVAMKALARAGDVDQV--LARFAELRASGTPSVLSYNTLMNALVEAGRVKDAHDAFGEML 116

Query: 742  ERGLQPNAVTLNILLDC------------------------------------LCRASRA 671
              G  PNA + NILL                                      LCR  R 
Sbjct: 117  AAGGAPNASSCNILLKLHSWTSDDDDSPYKTILSMREAGVEPDVSTYSTLITGLCRVGRL 176

Query: 670  WEAKRLLERSADIKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFK-KGITANSWTFSI 494
             EA  +LE   +      V  Y  ++      GR    + L   M K  G   N  T+++
Sbjct: 177  PEAWGVLECMLEQGCRPMVHTYTPIVQGYCREGRVGEAMDLMAMMEKCAGCPPNVVTYNV 236

Query: 493  VVHSLSKAGMVSLAKLVFD---SNGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMEN 323
            ++ +L  AG  +  K +     + G+ P++++Y T ++     GK  +   L   M  + 
Sbjct: 237  LIRALCDAGQFNEVKQLLTESRTKGWTPSIVTYNTFMNGLCQKGKAKEALVLLGVMLGKG 296

Query: 322  IAPNWITYSVMITCLCRDKRYLEAVGCFYRSFKDGYSPKLVAH--LLYQLVRGGKLKEVA 149
            + P   T S+++ CLC   R   A     RS    +   +VA+  ++ +L   G  + V 
Sbjct: 297  LDPTDFTLSILLNCLCHASRISHARYLLERSTSSRWYAGVVAYNTVMGRLCEMGHWRGVL 356

Query: 148  CLLDWILRQGFTIDVCIFHSLIKAFCRTGYCRSSR 44
             LL  ++++G   +   F+ +I++ C    C +++
Sbjct: 357  KLLTDMIKKGVMPNTRTFNIVIRSLCIGRKCSAAK 391


>ref|NP_001147934.1| fertility restorer [Zea mays] gi|195614680|gb|ACG29170.1| fertility
            restorer [Zea mays]
          Length = 563

 Score =  359 bits (922), Expect = 1e-96
 Identities = 191/442 (43%), Positives = 279/442 (63%), Gaps = 3/442 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L  +GRA EA +VF+ ML  G++P+A++F +LVKLY+     F  AY+ +  M + G  P
Sbjct: 105  LVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADFHLAYDQIHAMRRHGLLP 164

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV T+STL+ GLC AG+++EA G+LD ML+E C P  +T+TPIVQ YC  G+I++A  L+
Sbjct: 165  DVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLI 224

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              ME  GCPPN VTYNVL+ ALC    F EVE +L +   K  +  T+TY+IYMD L K 
Sbjct: 225  GFMEEAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKK 284

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G+A ++   FE +  +GL P A TL+I+L+CLC  SR  +A  +LERS D+ + A+VV Y
Sbjct: 285  GMAKEALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAY 344

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMSRL D GRWPAVL+L  DM KK I  N+ T +I +HSL  A  +S+AK +  + GF
Sbjct: 345  NTVMSRLCDMGRWPAVLELLADMIKKCIVPNTRTLNIFIHSLCIADKLSVAKKLVYNQGF 404

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMA-MENIAPNWITYSVMITCLCRDKRYLEAV 248
              N ++Y TLIH  Y+ G+ ++  ++F  M  + NIAP+ +TY++M+  LCR  ++ +A 
Sbjct: 405  PANAVTYNTLIHSFYLRGEAYEADNMFAYMTEVANIAPDEVTYTIMVDGLCRQGKFDKAT 464

Query: 247  GCFYRSFKD--GYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAF 74
              F  S ++    S  L+  LL  L R  +   +  +   I RQGF     IF   +++ 
Sbjct: 465  DFFKESLRNRLRLSKDLLTALLNGLARSDRNTNILVVFQEIERQGFVRCYLIFGDTVRSI 524

Query: 73   CRTGYCRSSRIYEICRMLDKML 8
            C+ G+ + +++Y +  +L+ ML
Sbjct: 525  CQVGFRQHTKMYGLPFLLEGML 546



 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 41/396 (10%)
 Frame = -2

Query: 1066 QMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLMNTMEIIGCPPNTVTYNVLVEALCKIG 887
            Q LE  C       TP+ +A      +     LM +    G PP+ + YN L+ AL + G
Sbjct: 53   QQLERGC---NLAMTPLGRAGDVDQVVHLFSDLMLSTSSAGVPPSVLCYNTLLNALVEAG 109

Query: 886  AFDEVETLLKD----------------ATLKAWQ--------------------PDTITY 815
               E  ++                     L AW+                    PD  T+
Sbjct: 110  RAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADFHLAYDQIHAMRRHGLLPDVGTF 169

Query: 814  SIYMDNLCKLGLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSAD 635
            S  +  LC+ G  D+++ + + ML+ G +P   T   ++   CR  +  EA  L+    +
Sbjct: 170  STLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMEE 229

Query: 634  IKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSL 455
                 + V YN ++  L D  R+  V ++  ++  KG   ++ T++I + +L K GM   
Sbjct: 230  AGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKE 289

Query: 454  AKLVFDS---NGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMIT 284
            A   F++    G  P   + + +++      +      + ++    N     + Y+ +++
Sbjct: 290  ALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAYNTVMS 349

Query: 283  CLCRDKRYLEAVGCFYRSFKDGYSP--KLVAHLLYQLVRGGKLKEVACLLDWILRQGFTI 110
             LC   R+   +       K    P  + +   ++ L    KL     L   +  QGF  
Sbjct: 350  RLCDMGRWPAVLELLADMIKKCIVPNTRTLNIFIHSLCIADKLSVAKKL---VYNQGFPA 406

Query: 109  DVCIFHSLIKAFCRTGYCRSSRIYEICRMLDKMLQI 2
            +   +++LI +F   G       YE   M   M ++
Sbjct: 407  NAVTYNTLIHSFYLRG-----EAYEADNMFAYMTEV 437


>gb|ACF86948.1| unknown [Zea mays] gi|414591270|tpg|DAA41841.1| TPA: fertility
            restorer [Zea mays]
          Length = 563

 Score =  357 bits (915), Expect = 8e-96
 Identities = 190/442 (42%), Positives = 278/442 (62%), Gaps = 3/442 (0%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            L  +GRA EA +VF+ ML  G++P+A++F +LVKLY+     F  AY+ +  M + G  P
Sbjct: 105  LVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADFHLAYDQIHAMRRHGLLP 164

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
            DV T+STL+ GLC AG+++EA G+LD ML+E C P  +T+TPIVQ YC  G+I++A  L+
Sbjct: 165  DVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLI 224

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
              ME  GCPPN VTYNVL+ ALC    F EVE +L +   K  +  T+TY+IYMD L K 
Sbjct: 225  GFMEDAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKK 284

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G+A ++   FE +  +GL P A TL+I+L+CLC  SR  +A  +LERS D+ + A+VV Y
Sbjct: 285  GMAKEALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAY 344

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVMSRL D GRWPAVL+L  DM KK I  N+ T +I +HSL  A  +S+A  +  + GF
Sbjct: 345  NTVMSRLCDMGRWPAVLELLADMIKKCIIPNTRTLNIFIHSLCIADKLSVAMKLVCNQGF 404

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMA-MENIAPNWITYSVMITCLCRDKRYLEAV 248
              N ++Y TLIH  Y+ G+ ++  ++F  M  + NIAP+ +TY++M+  LCR  ++ +A 
Sbjct: 405  PANAVTYNTLIHSFYLRGEAYEADNMFAYMTEVANIAPDEVTYTIMVDGLCRQGKFDKAT 464

Query: 247  GCFYRSFKD--GYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAF 74
              F  S ++    S  L+  LL  L R  +   +  +   I RQGF     IF   +++ 
Sbjct: 465  DFFKESLRNRLRLSKDLLTALLNGLARSDRNTNILVVFQEIERQGFVRCYLIFGDTVRSI 524

Query: 73   CRTGYCRSSRIYEICRMLDKML 8
            C+ G+ + +++Y +  +L+ ML
Sbjct: 525  CQVGFRQHTKMYGLPFLLEGML 546



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 81/396 (20%), Positives = 152/396 (38%), Gaps = 41/396 (10%)
 Frame = -2

Query: 1066 QMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLMNTMEIIGCPPNTVTYNVLVEALCKIG 887
            Q LE  C       TP+ +A      +     LM +    G PP+ + YN L+ AL + G
Sbjct: 53   QQLERGC---NLAMTPLGRAGDVDQVVHLFSDLMLSTSSAGVPPSVLCYNTLLNALVEAG 109

Query: 886  AFDEVETLLKD----------------ATLKAWQ--------------------PDTITY 815
               E  ++                     L AW+                    PD  T+
Sbjct: 110  RAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADFHLAYDQIHAMRRHGLLPDVGTF 169

Query: 814  SIYMDNLCKLGLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSAD 635
            S  +  LC+ G  D+++ + + ML+ G +P   T   ++   CR  +  EA  L+    D
Sbjct: 170  STLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMED 229

Query: 634  IKWIASVVNYNTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSL 455
                 + V YN ++  L D  R+  V ++  ++  KG   ++ T++I + +L K GM   
Sbjct: 230  AGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKE 289

Query: 454  AKLVFDS---NGFVPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMIT 284
            A   F++    G  P   + + +++      +      + ++    N     + Y+ +++
Sbjct: 290  ALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAYNTVMS 349

Query: 283  CLCRDKRYLEAVGCFYRSFKDGYSP--KLVAHLLYQLVRGGKLKEVACLLDWILRQGFTI 110
             LC   R+   +       K    P  + +   ++ L    KL   +  +  +  QGF  
Sbjct: 350  RLCDMGRWPAVLELLADMIKKCIIPNTRTLNIFIHSLCIADKL---SVAMKLVCNQGFPA 406

Query: 109  DVCIFHSLIKAFCRTGYCRSSRIYEICRMLDKMLQI 2
            +   +++LI +F   G       YE   M   M ++
Sbjct: 407  NAVTYNTLIHSFYLRG-----EAYEADNMFAYMTEV 437


>ref|XP_004960083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63080,
            mitochondrial-like [Setaria italica]
          Length = 549

 Score =  343 bits (880), Expect = 9e-92
 Identities = 180/441 (40%), Positives = 263/441 (59%)
 Frame = -2

Query: 1324 LASSGRAEEALTVFEEMLTYGISPDAAAFTVLVKLYSCCLGQFDAAYEVVRWMVKCGCAP 1145
            LA +GR  +A ++F++ML  G++PD AAF++L+ +YS  L    AA+ V+ WM + G  P
Sbjct: 109  LAKAGRPADAASLFDDMLANGVTPDRAAFSLLLHVYSSHLHLPAAAHSVLLWMTRLGLPP 168

Query: 1144 DVVTYSTLIAGLCWAGRVEEALGILDQMLEEECLPNAYTFTPIVQAYCSSGRIDKAKGLM 965
              + Y+ LI   C AGR+ +AL +LD+M         +TF PI++A+C +  I  A  L+
Sbjct: 169  TPIDYTDLIFSFCRAGRLADALQLLDEMRALNYPLTPHTFAPILKAFCDNADIQAADALI 228

Query: 964  NTMEIIGCPPNTVTYNVLVEALCKIGAFDEVETLLKDATLKAWQPDTITYSIYMDNLCKL 785
            ++M   GC P+ V YN+ ++ LCK+G FD VE ++ +++   W PD +TYS Y+  LC+ 
Sbjct: 229  SSMRCSGCLPDVVIYNIYIQGLCKMGYFDAVEQVIDESSRNGWVPDAVTYSTYVAGLCRF 288

Query: 784  GLADKSFDLFEVMLERGLQPNAVTLNILLDCLCRASRAWEAKRLLERSADIKWIASVVNY 605
            G  +++F   E+M+ +GLQ   V LNILLD + +    W  K +LER  ++ ++  VV Y
Sbjct: 289  GYIEEAFRQLEIMVAKGLQLTVVGLNILLDYVAQDLDMWAGKEVLERCQELGFVVDVVTY 348

Query: 604  NTVMSRLSDGGRWPAVLKLFVDMFKKGITANSWTFSIVVHSLSKAGMVSLAKLVFDSNGF 425
            NTVM   S  G+W  VLKLF D+ KK IT N  T++I++  L +AG    AK +F S GF
Sbjct: 349  NTVMDHFSKKGKWLRVLKLFTDLLKKPITPNVQTYNILISCLCRAGKFQFAKFMFSSKGF 408

Query: 424  VPNVMSYTTLIHYSYIAGKEHDVHHLFQKMAMENIAPNWITYSVMITCLCRDKRYLEAVG 245
            V + ++   LIH  Y AGKE ++  LF  +    IAP+ ITY+ ++ CL R  R  EA  
Sbjct: 409  VADTVTCNILIHEFYEAGKEGELGFLFADVNAGKIAPDTITYNTLVDCLFRSGRRSEAAN 468

Query: 244  CFYRSFKDGYSPKLVAHLLYQLVRGGKLKEVACLLDWILRQGFTIDVCIFHSLIKAFCRT 65
             F R   DGY  + VAHL Y LVR G   E   L D I  +G  +D  IF ++IKAFCR 
Sbjct: 469  -FVRHIDDGYPTEPVAHLTYWLVRSGNTHEALRLFDDIQIKGLVLDSKIFANVIKAFCRK 527

Query: 64   GYCRSSRIYEICRMLDKMLQI 2
            G    S + ++C +LD+ML I
Sbjct: 528  GPVECSDMSQLCSVLDRMLGI 548