BLASTX nr result
ID: Zingiber25_contig00021488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00021488
(1073 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis] 415 e-113
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi... 414 e-113
emb|CBI32614.3| unnamed protein product [Vitis vinifera] 406 e-111
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p... 406 e-111
ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containi... 406 e-111
gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus pe... 405 e-110
ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containi... 405 e-110
ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containi... 405 e-110
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr... 403 e-110
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi... 403 e-110
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi... 400 e-109
gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus... 400 e-109
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi... 398 e-108
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu... 397 e-108
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi... 396 e-108
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps... 396 e-108
dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare] 396 e-108
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian... 394 e-107
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana] 394 e-107
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr... 393 e-107
>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
Length = 749
Score = 415 bits (1067), Expect = e-113
Identities = 206/263 (78%), Positives = 227/263 (86%), Gaps = 16/263 (6%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCIL+DDSAGAL +FNEMRA+GIAP+K+SYTTLMKAFALSGQPKLAHKVFDE
Sbjct: 485 VSYNILIDGCILVDDSAGALTFFNEMRAKGIAPTKISYTTLMKAFALSGQPKLAHKVFDE 544
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK D +A+NML EGYC+LGL+EE KKIV++M++NGF P+VATYG LANGIA+AR
Sbjct: 545 MLDDPRVKADIIAWNMLVEGYCKLGLVEEAKKIVQRMKENGFHPNVATYGSLANGIAVAR 604
Query: 363 KPGEALLLWNEVKERC-------------ASLPP---LRPDEGLLDALADVCVRAAFFKK 494
KPGEALLLWNEVKERC +S PP L+PDEGLLD LAD+CVRAAFFKK
Sbjct: 605 KPGEALLLWNEVKERCGGMKKEGEENPDSSSTPPPPLLKPDEGLLDTLADICVRAAFFKK 664
Query: 495 ALEIVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLG 674
ALEIVACMEENGI PNKTKY RIYVEMHSRMFTSKHASQARQDRR+ +KRAAEAFKFWLG
Sbjct: 665 ALEIVACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASQARQDRRREKKRAAEAFKFWLG 724
Query: 675 LPNSYYGSEWRLEPSIVEDEYGD 743
LPNSYYGSEWRLEP D + D
Sbjct: 725 LPNSYYGSEWRLEPIDGNDYFSD 747
Score = 75.5 bits (184), Expect = 3e-11
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 32/204 (15%)
Frame = +3
Query: 39 IDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRV 218
+ D+ L P VSYTT++ AF SG A +VF EM + RV +R+
Sbjct: 391 VTDTVRMLEAMRHQEDSASHPDHVSYTTVVSAFVNSGSMDRARQVFAEMTRI-RVPANRI 449
Query: 219 AYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNE 395
YN+L +GYC+ +++ K+++++M ++ G EPDV +Y L +G L AL +NE
Sbjct: 450 TYNILLKGYCKQLQIDKAKELLKEMAEDAGIEPDVVSYNILIDGCILVDDSAGALTFFNE 509
Query: 396 VK-------------------------------ERCASLPPLRPDEGLLDALADVCVRAA 482
++ + P ++ D + L + +
Sbjct: 510 MRAKGIAPTKISYTTLMKAFALSGQPKLAHKVFDEMLDDPRVKADIIAWNMLVEGYCKLG 569
Query: 483 FFKKALEIVACMEENGISPNKTKY 554
++A +IV M+ENG PN Y
Sbjct: 570 LVEEAKKIVQRMKENGFHPNVATY 593
>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 414 bits (1063), Expect = e-113
Identities = 206/255 (80%), Positives = 227/255 (89%), Gaps = 10/255 (3%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYN LIDGCIL+DDSAGALAYFNEMRA+GIAP+K+SYTTLMKAFALSGQPKLA+KVFDE
Sbjct: 491 VSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDE 550
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M +DPRVK+D VA+NML E +CRLGL+EE KK V++MR+NGF P+VATYG LANGIALAR
Sbjct: 551 MLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALAR 610
Query: 363 KPGEALLLWNEVKERC----------ASLPPLRPDEGLLDALADVCVRAAFFKKALEIVA 512
KPGEALLLWNEVKERC +S PPL+PDEGLLD LAD+CVRAAFF+KALEIVA
Sbjct: 611 KPGEALLLWNEVKERCVVKEEGEISKSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVA 670
Query: 513 CMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSYY 692
CMEENGI PNK+KY RIYVEMHSRMFTSKHAS+ARQDRR RKRAAEAFKFWLGLPNSYY
Sbjct: 671 CMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGLPNSYY 730
Query: 693 GSEWRLEPSIVEDEY 737
GSEWRLEP I D+Y
Sbjct: 731 GSEWRLEP-IDGDDY 744
Score = 57.4 bits (137), Expect = 1e-05
Identities = 46/184 (25%), Positives = 75/184 (40%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
V+Y ++ + A EM G+ ++V+Y L+K + Q A ++ E
Sbjct: 420 VTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVRE 479
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M D + D V+YN L +G + +MR G P +Y L AL+
Sbjct: 480 MVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSG 539
Query: 363 KPGEALLLWNEVKERCASLPPLRPDEGLLDALADVCVRAAFFKKALEIVACMEENGISPN 542
+P L N+V + P ++ D + L + R ++A + V M ENG PN
Sbjct: 540 QP----KLANKVFDEMLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPN 595
Query: 543 KTKY 554
Y
Sbjct: 596 VATY 599
>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 406 bits (1044), Expect = e-111
Identities = 202/245 (82%), Positives = 221/245 (90%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYN LIDGCIL+DDSAGALAYFNEMRA+GIAP+K+SYTTLMKAFALSGQPKLA+KVFDE
Sbjct: 471 VSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDE 530
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M +DPRVK+D VA+NML E +CRLGL+EE KK V++MR+NGF P+VATYG LANGIALAR
Sbjct: 531 MLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALAR 590
Query: 363 KPGEALLLWNEVKERCASLPPLRPDEGLLDALADVCVRAAFFKKALEIVACMEENGISPN 542
KPGEALLLWNEVKERC PDEGLLD LAD+CVRAAFF+KALEIVACMEENGI PN
Sbjct: 591 KPGEALLLWNEVKERC-------PDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 643
Query: 543 KTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSYYGSEWRLEPSI 722
K+KY RIYVEMHSRMFTSKHAS+ARQDRR RKRAAEAFKFWLGLPNSYYGSEWRLEP I
Sbjct: 644 KSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP-I 702
Query: 723 VEDEY 737
D+Y
Sbjct: 703 DGDDY 707
>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 758
Score = 406 bits (1043), Expect = e-111
Identities = 200/251 (79%), Positives = 221/251 (88%), Gaps = 13/251 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCILIDDSAGALA+FNEMR +GIAP+K+SYTTLMKAFALSGQPKLA+KVFDE
Sbjct: 505 VSYNILIDGCILIDDSAGALAFFNEMRERGIAPTKISYTTLMKAFALSGQPKLANKVFDE 564
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M +DPRVK+D VA+NML EGY RLGL+EE KKI+++M++ GF P+VATYG LANGI+LAR
Sbjct: 565 MLRDPRVKVDLVAWNMLVEGYSRLGLVEEAKKIIQRMKEKGFYPNVATYGSLANGISLAR 624
Query: 363 KPGEALLLWNEVKERC-------------ASLPPLRPDEGLLDALADVCVRAAFFKKALE 503
KPGEALLLW E+KERC +S PPL+PDEGLLD LAD+CVRAAFFKKALE
Sbjct: 625 KPGEALLLWKEIKERCKMKKEGDNPCSDSSSPPPLKPDEGLLDTLADICVRAAFFKKALE 684
Query: 504 IVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPN 683
IVACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQARQDRR RKRAAEAFKFWLGLPN
Sbjct: 685 IVACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRIERKRAAEAFKFWLGLPN 744
Query: 684 SYYGSEWRLEP 716
SYYGSEW EP
Sbjct: 745 SYYGSEWHFEP 755
>ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 406 bits (1043), Expect = e-111
Identities = 197/249 (79%), Positives = 223/249 (89%), Gaps = 11/249 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCIL+DDSAGAL++FNEMRA+GIAP+K+SYTTLMKAFA SGQPKLAH+VF+E
Sbjct: 457 VSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNE 516
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M+ DPRVK+D +A+NML EGYCRLGL+EE KK+V+KM+++GF PDV TYG LANGIALAR
Sbjct: 517 MDSDPRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQKMKESGFHPDVGTYGSLANGIALAR 576
Query: 363 KPGEALLLWNEVKERC----------ASLPPLRPDEGLLDALADVCVRAAFFKKALEIVA 512
KPGEALLLWNEVKERC +S+PPL+PD LLD +AD+CVRAAFF+KALEIVA
Sbjct: 577 KPGEALLLWNEVKERCEVGKEGGKSDSSVPPLKPDGALLDTIADICVRAAFFRKALEIVA 636
Query: 513 CMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSYY 692
CMEENGI PNKTK+ RIYVEMHSRMFTSKHAS+ARQDRR RKRAAEAFKFWLGLPNSYY
Sbjct: 637 CMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRAAEAFKFWLGLPNSYY 696
Query: 693 -GSEWRLEP 716
GSEWRLEP
Sbjct: 697 DGSEWRLEP 705
Score = 62.0 bits (149), Expect = 4e-07
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = +3
Query: 39 IDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRV 218
+ D+ L + +G P VSYTT++ A G A +V EM + V + +
Sbjct: 363 VSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGAMDRARQVLAEMTRIG-VPANLI 421
Query: 219 AYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNE 395
YN+L +GYC+ +++ ++++++M + G +PDV +Y L +G L AL +NE
Sbjct: 422 TYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSYNILIDGCILVDDSAGALSFFNE 481
Query: 396 VKER 407
++ R
Sbjct: 482 MRAR 485
>gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus persica]
Length = 740
Score = 405 bits (1041), Expect = e-110
Identities = 198/249 (79%), Positives = 218/249 (87%), Gaps = 11/249 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCIL+DDSAGAL +FNEMR +G+AP+K+SYTTLMKAFALSGQPKLA+KVFDE
Sbjct: 487 VSYNILIDGCILVDDSAGALGFFNEMRTRGLAPTKISYTTLMKAFALSGQPKLANKVFDE 546
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK D VA+NML E YCR+GL+EE KKI+++++ NGF PDVATYG LANGIALAR
Sbjct: 547 MLNDPRVKADLVAWNMLVEAYCRMGLVEEAKKIIQRIKDNGFHPDVATYGSLANGIALAR 606
Query: 363 KPGEALLLWNEVKERC-----------ASLPPLRPDEGLLDALADVCVRAAFFKKALEIV 509
KPGEALLLWNEVKERC + P L+PDEGLLD LAD+CVRAAFFKKALEIV
Sbjct: 607 KPGEALLLWNEVKERCRVKKEGETSDPSDPPTLKPDEGLLDTLADICVRAAFFKKALEIV 666
Query: 510 ACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSY 689
ACMEENGI PNKTK+ +IYVEMHSRMFTSKHASQARQDRR RKRAAEAFKFWLGLPNSY
Sbjct: 667 ACMEENGIPPNKTKFTKIYVEMHSRMFTSKHASQARQDRRIERKRAAEAFKFWLGLPNSY 726
Query: 690 YGSEWRLEP 716
YGSEWRLEP
Sbjct: 727 YGSEWRLEP 735
Score = 66.2 bits (160), Expect = 2e-08
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 99 PSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKK 278
P V+YTT++ AF +G A +V EM + V +R+ YN+L +GYC+ +++ K+
Sbjct: 413 PDHVTYTTVISAFVKAGSMDRARRVLAEMTR-VGVPANRITYNILLKGYCQQLQIDQAKE 471
Query: 279 IVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNEVKER 407
++ +M + G EPDV +Y L +G L AL +NE++ R
Sbjct: 472 LLREMADDAGIEPDVVSYNILIDGCILVDDSAGALGFFNEMRTR 515
>ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 732
Score = 405 bits (1040), Expect = e-110
Identities = 196/251 (78%), Positives = 219/251 (87%), Gaps = 13/251 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCIL+DDSAGAL++FNEMR +GIAP+K+SYTTLMKAFALSGQPKLA +VFDE
Sbjct: 473 VSYNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPKLAQRVFDE 532
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRV++D +A+NML EGY RLGL+EE KK+++KM++NGF PDV+TYG LANGIALAR
Sbjct: 533 MMNDPRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTYGSLANGIALAR 592
Query: 363 KPGEALLLWNEVKERC-------------ASLPPLRPDEGLLDALADVCVRAAFFKKALE 503
KPGEAL+LWNEVKERC PPL+PDEGLLD LAD+CVRAAFF+KALE
Sbjct: 593 KPGEALILWNEVKERCEVGKEGGKSDSSSVVPPPLKPDEGLLDTLADICVRAAFFRKALE 652
Query: 504 IVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPN 683
I ACMEENGI PNKTKY RIYVEMHSRMFTSKHAS+ARQDRR RKRAAEAFKFWLGLPN
Sbjct: 653 IAACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVERKRAAEAFKFWLGLPN 712
Query: 684 SYYGSEWRLEP 716
SYYGSEWRLEP
Sbjct: 713 SYYGSEWRLEP 723
Score = 64.7 bits (156), Expect = 6e-08
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Frame = +3
Query: 9 YNILIDGCILIDDSAGALAYFNEMRAQGIA---PSKVSYTTLMKAFALSGQPKLAHKVFD 179
Y L+ G + + + MR Q + P VSYTT++ A +G A +V
Sbjct: 366 YTTLMKGYMKAGRVSDTVRMLEAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 425
Query: 180 EMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIAL 356
EM + V +R+ YN+L +GYCR +++ +++++ M ++ G +PDV +Y L +G L
Sbjct: 426 EMTRIG-VPANRITYNILLKGYCRQLQMDKARELLKDMTEDIGIQPDVVSYNILIDGCIL 484
Query: 357 ARKPGEALLLWNEVKER-------------------------------CASLPPLRPDEG 443
AL +NE++ R + P +R D
Sbjct: 485 VDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMMNDPRVRVDLI 544
Query: 444 LLDALADVCVRAAFFKKALEIVACMEENGISPNKTKY 554
+ L + R ++A +++ M+ENG P+ + Y
Sbjct: 545 AWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTY 581
>ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 732
Score = 405 bits (1040), Expect = e-110
Identities = 196/251 (78%), Positives = 219/251 (87%), Gaps = 13/251 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCIL+DDSAGAL++FNEMR +GIAP+K+SYTTLMKAFALSGQPKLA +VFDE
Sbjct: 473 VSYNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPKLAQRVFDE 532
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRV++D +A+NML EGY RLGL+EE KK+++KM++NGF PDV+TYG LANGIALAR
Sbjct: 533 MMNDPRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTYGSLANGIALAR 592
Query: 363 KPGEALLLWNEVKERC-------------ASLPPLRPDEGLLDALADVCVRAAFFKKALE 503
KPGEAL+LWNEVKERC PPL+PDEGLLD LAD+CVRAAFF+KALE
Sbjct: 593 KPGEALILWNEVKERCEVGKEGGKSDSSSVVPPPLKPDEGLLDTLADICVRAAFFRKALE 652
Query: 504 IVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPN 683
I ACMEENGI PNKTKY RIYVEMHSRMFTSKHAS+ARQDRR RKRAAEAFKFWLGLPN
Sbjct: 653 IAACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVERKRAAEAFKFWLGLPN 712
Query: 684 SYYGSEWRLEP 716
SYYGSEWRLEP
Sbjct: 713 SYYGSEWRLEP 723
Score = 64.7 bits (156), Expect = 6e-08
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Frame = +3
Query: 9 YNILIDGCILIDDSAGALAYFNEMRAQGIA---PSKVSYTTLMKAFALSGQPKLAHKVFD 179
Y L+ G + + + MR Q + P VSYTT++ A +G A +V
Sbjct: 366 YTTLMKGYMKAGRVSDTVRMLEAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 425
Query: 180 EMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIAL 356
EM + V +R+ YN+L +GYCR +++ +++++ M ++ G +PDV +Y L +G L
Sbjct: 426 EMTRIG-VPANRITYNILLKGYCRQLQMDKARELLKDMTEDIGIQPDVVSYNILIDGCIL 484
Query: 357 ARKPGEALLLWNEVKER-------------------------------CASLPPLRPDEG 443
AL +NE++ R + P +R D
Sbjct: 485 VDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMMNDPRVRVDLI 544
Query: 444 LLDALADVCVRAAFFKKALEIVACMEENGISPNKTKY 554
+ L + R ++A +++ M+ENG P+ + Y
Sbjct: 545 AWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTY 581
>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
gi|568853953|ref|XP_006480600.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Citrus sinensis]
gi|557530935|gb|ESR42118.1| hypothetical protein
CICLE_v10011148mg [Citrus clementina]
Length = 740
Score = 403 bits (1036), Expect = e-110
Identities = 200/256 (78%), Positives = 226/256 (88%), Gaps = 11/256 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDG ILIDDSAGAL +FNEMRA+GIAP+K+SYTTLMKAFALS QPKLA+KVFDE
Sbjct: 480 VSYNILIDGFILIDDSAGALTFFNEMRARGIAPTKISYTTLMKAFALSSQPKLANKVFDE 539
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M +DPRVK+D VA+NML EGYCR+GL+EE K+I+E+M++NGF P+VATYG LANGI+LAR
Sbjct: 540 MLRDPRVKVDIVAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNVATYGSLANGISLAR 599
Query: 363 KPGEALLLWNEVKERCASL-----------PPLRPDEGLLDALADVCVRAAFFKKALEIV 509
KPGEALLLW E+KERC PPL+PDE LLDALAD+CVRAAFF+KALEIV
Sbjct: 600 KPGEALLLWKEIKERCEVKKEGVNADSDLPPPLKPDEELLDALADICVRAAFFRKALEIV 659
Query: 510 ACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSY 689
ACMEE+GI PNKTKYK+IYVEMHSRMFTSKHASQARQDRR+ RKRAAEAFKFWLGLPNSY
Sbjct: 660 ACMEEHGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSY 719
Query: 690 YGSEWRLEPSIVEDEY 737
YGSEWRL+P + DEY
Sbjct: 720 YGSEWRLDP-MDGDEY 734
Score = 66.2 bits (160), Expect = 2e-08
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Frame = +3
Query: 39 IDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRV 218
+ D+ L P V+YTT++ A +G A +V EM + V +R+
Sbjct: 386 VSDTVRMLGAMRRQEDDASHPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIG-VPANRI 444
Query: 219 AYNMLTEGYCRLGLLEEGKKIVEKMRQNG-FEPDVATYGCLANGIALARKPGEALLLWNE 395
YN+L +GYC+ +++ K+++ +M + EPDV +Y L +G L AL +NE
Sbjct: 445 TYNILLKGYCQQLQIDKAKELLREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNE 504
Query: 396 VKER-----------------CASLPPLRP---DEGLLDALADVCV-----------RAA 482
++ R +S P L DE L D V + R
Sbjct: 505 MRARGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRMG 564
Query: 483 FFKKALEIVACMEENGISPNKTKY 554
++A I+ M+ENG PN Y
Sbjct: 565 LVEEAKRIIERMKENGFYPNVATY 588
>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 743
Score = 403 bits (1036), Expect = e-110
Identities = 199/247 (80%), Positives = 218/247 (88%), Gaps = 11/247 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCI +DDSA ALA+FNEMRA+GIAP+K+SYTTLMKAFALSGQPKLA+KVFDE
Sbjct: 490 VSYNILIDGCIQVDDSARALAFFNEMRAKGIAPTKISYTTLMKAFALSGQPKLANKVFDE 549
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK D VA+NML EGYCRLGL+EE KKI+++M+++GF PDVATYG LANGIALAR
Sbjct: 550 MLNDPRVKADLVAWNMLVEGYCRLGLVEESKKIIQRMKEHGFHPDVATYGSLANGIALAR 609
Query: 363 KPGEALLLWNEVKERC-----------ASLPPLRPDEGLLDALADVCVRAAFFKKALEIV 509
KPGEALLLWNEVK+RC A P L+PDEGLLD LAD+CVRAAFFKKALEIV
Sbjct: 610 KPGEALLLWNEVKDRCTAKKEGEKSDDADPPTLKPDEGLLDILADICVRAAFFKKALEIV 669
Query: 510 ACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSY 689
ACMEENGI PNKTK+ +IYVEMHSRMFTSKHASQARQDRR RKRAAEAFKFWLGLPNSY
Sbjct: 670 ACMEENGIPPNKTKFTKIYVEMHSRMFTSKHASQARQDRRSERKRAAEAFKFWLGLPNSY 729
Query: 690 YGSEWRL 710
YGSEWRL
Sbjct: 730 YGSEWRL 736
Score = 66.6 bits (161), Expect = 2e-08
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 99 PSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKK 278
P V+YTT++ AF +G A +V EM + V +R+ YN+L +GYC+ +++ K+
Sbjct: 416 PDHVTYTTVVSAFVKAGSMDRARRVLAEMTR-VGVPANRITYNILLKGYCQQLQIDQAKE 474
Query: 279 IVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNEVKER 407
+V +M ++ G EPDV +Y L +G AL +NE++ +
Sbjct: 475 LVREMTEDAGIEPDVVSYNILIDGCIQVDDSARALAFFNEMRAK 518
>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 400 bits (1029), Expect = e-109
Identities = 198/249 (79%), Positives = 219/249 (87%), Gaps = 10/249 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNI+IDG IL+DDSAGAL +FNEMR++GIAP+KVSYTTLMKAFA SGQPKLA KVFDE
Sbjct: 484 VSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDE 543
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK+D VA+NML EGYCRLG +EE K++V+KM++NGF PDV+TYG LANGI+LAR
Sbjct: 544 MLNDPRVKVDIVAWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLAR 603
Query: 363 KPGEALLLWNEVKERCA----------SLPPLRPDEGLLDALADVCVRAAFFKKALEIVA 512
KPGEALLLWNEVKERCA S PPL+PDEGLLD LAD+CVRAAFF+KALEIVA
Sbjct: 604 KPGEALLLWNEVKERCAVRRGYKSDSSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVA 663
Query: 513 CMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSYY 692
CMEENGI PNKTKY RIYVEMHSRMFTSKHAS+ARQDRR +KRAAEAFKFWLGLPNSYY
Sbjct: 664 CMEENGIPPNKTKYSRIYVEMHSRMFTSKHASKARQDRRIEKKRAAEAFKFWLGLPNSYY 723
Query: 693 GSEWRLEPS 719
GSEW EPS
Sbjct: 724 GSEWGWEPS 732
Score = 63.5 bits (153), Expect = 1e-07
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Frame = +3
Query: 9 YNILIDGCILIDDSAGALAYFNEMRAQGIA---PSKVSYTTLMKAFALSGQPKLAHKVFD 179
Y L+ G + + MR QG P VSYTT++ A +G A +V
Sbjct: 377 YTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVLA 436
Query: 180 EMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIAL 356
EM + +R+ YN+L +GYCRL +++ K + ++M G EPDV +Y + +G L
Sbjct: 437 EMTRIG-CPANRITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSIL 495
Query: 357 ARKPGEALLLWNEVK-------------------------------ERCASLPPLRPDEG 443
AL +NE++ + + P ++ D
Sbjct: 496 VDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIV 555
Query: 444 LLDALADVCVRAAFFKKALEIVACMEENGISPNKTKY 554
+ L + R + ++A ++V M+ENG P+ + Y
Sbjct: 556 AWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTY 592
>gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus vulgaris]
Length = 713
Score = 400 bits (1028), Expect = e-109
Identities = 195/249 (78%), Positives = 221/249 (88%), Gaps = 11/249 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNILIDGCIL+DDSAGAL++FNEMRA+GIAP+K+SYTTLMKAFA SGQPKLAHKVF+E
Sbjct: 454 VSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHKVFNE 513
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M+ DPRVK+D +A+NML EGYC+LGL+EE KK+V+KM+ +G PD +TYG LANGIALAR
Sbjct: 514 MDNDPRVKVDLIAWNMLVEGYCKLGLVEEAKKVVQKMKDSGLHPDASTYGSLANGIALAR 573
Query: 363 KPGEALLLWNEVKERC----------ASLPPLRPDEGLLDALADVCVRAAFFKKALEIVA 512
KPGEALLLWNEVKER +S+PPL+PD GLLD LAD+CVRAAFF+K LEIVA
Sbjct: 574 KPGEALLLWNEVKERFEMRKKGEKSDSSVPPLKPDGGLLDTLADICVRAAFFRKTLEIVA 633
Query: 513 CMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSYY 692
CMEENGI+PNKTK+ RIYVEMHSRMFTSKHAS+ARQDRR RKRAAEAFKFWLGLPNSYY
Sbjct: 634 CMEENGIAPNKTKFTRIYVEMHSRMFTSKHASRARQDRRTERKRAAEAFKFWLGLPNSYY 693
Query: 693 -GSEWRLEP 716
GSEWRLEP
Sbjct: 694 DGSEWRLEP 702
>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Solanum tuberosum]
Length = 738
Score = 398 bits (1023), Expect = e-108
Identities = 194/256 (75%), Positives = 224/256 (87%), Gaps = 11/256 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYN +IDGCIL+DD AGAL+YFNEMRA+GIAP+KVSYTTLMKAFA SGQ KLA+KVFDE
Sbjct: 481 VSYNTIIDGCILVDDCAGALSYFNEMRARGIAPTKVSYTTLMKAFASSGQAKLANKVFDE 540
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M KDPRVK+D VA+NML + Y +LG +EE K ++E+M++NGF P+VATYG LANGIALAR
Sbjct: 541 MLKDPRVKVDLVAWNMLVDAYSKLGKVEEAKSVIERMKENGFYPNVATYGSLANGIALAR 600
Query: 363 KPGEALLLWNEVKERC-----------ASLPPLRPDEGLLDALADVCVRAAFFKKALEIV 509
KPGEALLLWNE+K+RC + +PPL PDEGLLD LAD+CVRAAFFKKALEIV
Sbjct: 601 KPGEALLLWNEIKQRCGMGNGEESIPSSGVPPLEPDEGLLDTLADICVRAAFFKKALEIV 660
Query: 510 ACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSY 689
ACME++GI PNKTK+ RIYVEMHSRMFTSKHAS+ARQDRRK RKRAAEAFKFWLGLPNSY
Sbjct: 661 ACMEQHGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRKERKRAAEAFKFWLGLPNSY 720
Query: 690 YGSEWRLEPSIVEDEY 737
YGSEWRL+ S+++DEY
Sbjct: 721 YGSEWRLD-SVIDDEY 735
Score = 65.1 bits (157), Expect = 5e-08
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Frame = +3
Query: 99 PSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKK 278
P V+YTT++ AF G A +V EM + V +RV YN+L +GYC+ ++ ++
Sbjct: 408 PDHVTYTTVISAFVKQGLMDRAREVLAEMVRIG-VPANRVTYNVLIKGYCQQLHIDMAEE 466
Query: 279 IVEKMRQNGFEPDVATYGCLANGIALARKPGEALLLWNEVKER----------------- 407
++++M G EPDV +Y + +G L AL +NE++ R
Sbjct: 467 LIKEMIDTGIEPDVVSYNTIIDGCILVDDCAGALSYFNEMRARGIAPTKVSYTTLMKAFA 526
Query: 408 --------------CASLPPLRPDEGLLDALADVCVRAAFFKKALEIVACMEENGISPNK 545
P ++ D + L D + ++A ++ M+ENG PN
Sbjct: 527 SSGQAKLANKVFDEMLKDPRVKVDLVAWNMLVDAYSKLGKVEEAKSVIERMKENGFYPNV 586
Query: 546 TKY 554
Y
Sbjct: 587 ATY 589
>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
gi|550321129|gb|EEF04616.2| hypothetical protein
POPTR_0016s08650g [Populus trichocarpa]
Length = 724
Score = 397 bits (1020), Expect = e-108
Identities = 195/250 (78%), Positives = 218/250 (87%), Gaps = 12/250 (4%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYN LIDGCIL+DDSAGALA+FNEMR +GI P+K+SYTTLMKAFALSGQPKLA+KVFDE
Sbjct: 470 VSYNTLIDGCILVDDSAGALAFFNEMRTKGIMPTKISYTTLMKAFALSGQPKLANKVFDE 529
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M KDPRVK D VA+NML EGYCRLGL++E K ++++M++NGF PDVATYG LANGI+LAR
Sbjct: 530 MLKDPRVKADLVAWNMLLEGYCRLGLVDEAKTVIQRMKENGFHPDVATYGSLANGISLAR 589
Query: 363 KPGEALLLWNEVKERC------------ASLPPLRPDEGLLDALADVCVRAAFFKKALEI 506
KPGEALLLW EVKER + L PL+PDE LL LAD+CVRAAFF+KALEI
Sbjct: 590 KPGEALLLWKEVKERWEVKGEGESSNSDSPLLPLKPDEELLATLADICVRAAFFQKALEI 649
Query: 507 VACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNS 686
VACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQARQDRR+ RKRAAEAFKFWLGLPNS
Sbjct: 650 VACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNS 709
Query: 687 YYGSEWRLEP 716
YYGSEWRL+P
Sbjct: 710 YYGSEWRLDP 719
Score = 60.1 bits (144), Expect = 1e-06
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 99 PSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKK 278
P ++YTT++ A +G A +V EM + V +R+ YN+L +GYC+ +++ K+
Sbjct: 396 PDHITYTTVISALVKAGSMDPARQVLAEMTRIG-VPANRITYNILLKGYCQQLQIDKAKE 454
Query: 279 IVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNEVKER 407
++++M + EPDV +Y L +G L AL +NE++ +
Sbjct: 455 LLKEMADDVNIEPDVVSYNTLIDGCILVDDSAGALAFFNEMRTK 498
>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi|297328472|gb|EFH58891.1|
HCF152 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 396 bits (1018), Expect = e-108
Identities = 191/252 (75%), Positives = 219/252 (86%), Gaps = 14/252 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNI+IDGCILIDDSAGALA+FNEMR +GIAP+K+SYTTLMKAFA+SGQPKLA++VFDE
Sbjct: 518 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 577
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK+D +A+NML EGYCRLGL+E+ +++V +M++NGF P+VATYG LANG++LAR
Sbjct: 578 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSLAR 637
Query: 363 KPGEALLLWNEVKERC--------------ASLPPLRPDEGLLDALADVCVRAAFFKKAL 500
KPGEALLLW E+KERC S P L+PDEGLLD LAD+CVRAAFFKKAL
Sbjct: 638 KPGEALLLWKEIKERCEVKKKEAPSDSSSDPSPPMLKPDEGLLDTLADICVRAAFFKKAL 697
Query: 501 EIVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLP 680
EI+ACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQAR DRR RKRAAEAFKFWLGLP
Sbjct: 698 EIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLP 757
Query: 681 NSYYGSEWRLEP 716
NSYYGSEW+L P
Sbjct: 758 NSYYGSEWKLGP 769
Score = 66.6 bits (161), Expect = 2e-08
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Frame = +3
Query: 39 IDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRV 218
+ D+A L + P +V+YTT++ AF +G A +V EM + V +R+
Sbjct: 424 VADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMAR-MGVPANRI 482
Query: 219 AYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNE 395
YN+L +GYC+ ++ + ++ +M ++ G EPDV +Y + +G L AL +NE
Sbjct: 483 TYNVLLKGYCKQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 542
Query: 396 VKER-------------------------------CASLPPLRPDEGLLDALADVCVRAA 482
++ R + P ++ D + L + R
Sbjct: 543 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 602
Query: 483 FFKKALEIVACMEENGISPNKTKY 554
+ A +V+ M+ENG PN Y
Sbjct: 603 LIEDAQRVVSRMKENGFYPNVATY 626
>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
gi|482565467|gb|EOA29656.1| hypothetical protein
CARUB_v10015405mg [Capsella rubella]
Length = 781
Score = 396 bits (1017), Expect = e-108
Identities = 190/252 (75%), Positives = 220/252 (87%), Gaps = 14/252 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNI+IDGCILIDDSAGALA+FNEMR +GIAP+K+SYTTLMKAFA+SGQPKLA++VFDE
Sbjct: 527 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 586
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK+D +A+NML EGYCRLGL+E+ +++V +M++NGF P+V+TYG LANG++LAR
Sbjct: 587 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVSTYGSLANGVSLAR 646
Query: 363 KPGEALLLWNEVKERC--------------ASLPPLRPDEGLLDALADVCVRAAFFKKAL 500
KPGEALLLW E+KERC +S P L+PDEGLLD LAD+CVRAAFFKKAL
Sbjct: 647 KPGEALLLWKEIKERCEVKKNEALSDSSSNSSPPMLKPDEGLLDTLADICVRAAFFKKAL 706
Query: 501 EIVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLP 680
EI+ACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQAR DRR RKRAAEAFKFWLGLP
Sbjct: 707 EIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLP 766
Query: 681 NSYYGSEWRLEP 716
NSYYGSEW+L P
Sbjct: 767 NSYYGSEWKLGP 778
>dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 733
Score = 396 bits (1017), Expect = e-108
Identities = 193/248 (77%), Positives = 218/248 (87%), Gaps = 5/248 (2%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
V+YN LIDGC+L+DDSAGALA FNEMRA+G+APS VSYTTLMKAFA SGQPK+AH VF+E
Sbjct: 478 VTYNTLIDGCVLMDDSAGALALFNEMRARGVAPSTVSYTTLMKAFAASGQPKVAHNVFEE 537
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
MEKDPRV +DR A+NML EGYC+ G+LE K+ VE+M+++G +PDVATYG LA GIA+AR
Sbjct: 538 MEKDPRVTVDRPAWNMLVEGYCQQGMLETAKQTVERMKESGVQPDVATYGSLAKGIAVAR 597
Query: 363 KPGEALLLWNEVKERCAS-----LPPLRPDEGLLDALADVCVRAAFFKKALEIVACMEEN 527
KPGEALLLWNEVKERC + P LRPDE LLDALADVCVR AFFKKALEIVACMEEN
Sbjct: 598 KPGEALLLWNEVKERCEAGSGNGKPGLRPDEELLDALADVCVRGAFFKKALEIVACMEEN 657
Query: 528 GISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLPNSYYGSEWR 707
GI+PNKTKYK+IY+EMHSRMFTSKHASQARQDRR+ RKRAAEAFKFWLGLPNSYYGSEWR
Sbjct: 658 GIAPNKTKYKKIYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYYGSEWR 717
Query: 708 LEPSIVED 731
+ P + D
Sbjct: 718 VGPLVGGD 725
Score = 71.2 bits (173), Expect = 6e-10
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Frame = +3
Query: 9 YNILIDGCILIDDSAGALAYFNEMRAQGIA-----PSKVSYTTLMKAFALSGQPKLAHKV 173
Y L+ G + +A MR +G P V+YTT++ A +G + AH V
Sbjct: 369 YTTLMKGYMNAGRVDDVVAMARAMRREGETMPASRPDHVTYTTVVSTLAAAGDMERAHAV 428
Query: 174 FDEMEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGI 350
DEM + V RV YN+L +GYC+ + ++++E+M + G E DV TY L +G
Sbjct: 429 LDEMAR-AGVPASRVTYNVLIKGYCQQLQMSRARELLEEMTTDAGIEADVVTYNTLIDGC 487
Query: 351 ALARKPGEALLLWNEVKER 407
L AL L+NE++ R
Sbjct: 488 VLMDDSAGALALFNEMRAR 506
Score = 65.5 bits (158), Expect = 4e-08
Identities = 44/184 (23%), Positives = 80/184 (43%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
V+Y ++ D A A +EM G+ S+V+Y L+K + Q A ++ +E
Sbjct: 407 VTYTTVVSTLAAAGDMERAHAVLDEMARAGVPASRVTYNVLIKGYCQQLQMSRARELLEE 466
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M D ++ D V YN L +G + + +MR G P +Y L A +
Sbjct: 467 MTTDAGIEADVVTYNTLIDGCVLMDDSAGALALFNEMRARGVAPSTVSYTTLMKAFAASG 526
Query: 363 KPGEALLLWNEVKERCASLPPLRPDEGLLDALADVCVRAAFFKKALEIVACMEENGISPN 542
+P A ++ E+++ P + D + L + + + A + V M+E+G+ P+
Sbjct: 527 QPKVAHNVFEEMEKD----PRVTVDRPAWNMLVEGYCQQGMLETAKQTVERMKESGVQPD 582
Query: 543 KTKY 554
Y
Sbjct: 583 VATY 586
>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein
[Arabidopsis thaliana] gi|332641272|gb|AEE74793.1| RNA
binding protein HCF152 [Arabidopsis thaliana]
Length = 778
Score = 394 bits (1011), Expect = e-107
Identities = 189/252 (75%), Positives = 219/252 (86%), Gaps = 14/252 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNI+IDGCILIDDSAGALA+FNEMR +GIAP+K+SYTTLMKAFA+SGQPKLA++VFDE
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK+D +A+NML EGYCRLGL+E+ +++V +M++NGF P+VATYG LANG++ AR
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Query: 363 KPGEALLLWNEVKERCA--------------SLPPLRPDEGLLDALADVCVRAAFFKKAL 500
KPG+ALLLW E+KERCA + P L+PDEGLLD LAD+CVRAAFFKKAL
Sbjct: 644 KPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKAL 703
Query: 501 EIVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLP 680
EI+ACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQAR DRR RKRAAEAFKFWLGLP
Sbjct: 704 EIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLP 763
Query: 681 NSYYGSEWRLEP 716
NSYYGSEW+L P
Sbjct: 764 NSYYGSEWKLGP 775
Score = 66.2 bits (160), Expect = 2e-08
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Frame = +3
Query: 39 IDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRV 218
+ D+A L + P +V+YTT++ AF +G A +V EM + V +R+
Sbjct: 430 VADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR-MGVPANRI 488
Query: 219 AYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNE 395
YN+L +GYC+ ++ + ++ +M ++ G EPDV +Y + +G L AL +NE
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548
Query: 396 VKER-------------------------------CASLPPLRPDEGLLDALADVCVRAA 482
++ R + P ++ D + L + R
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 483 FFKKALEIVACMEENGISPNKTKY 554
+ A +V+ M+ENG PN Y
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATY 632
>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 394 bits (1011), Expect = e-107
Identities = 189/252 (75%), Positives = 219/252 (86%), Gaps = 14/252 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNI+IDGCILIDDSAGALA+FNEMR +GIAP+K+SYTTLMKAFA+SGQPKLA++VFDE
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M DPRVK+D +A+NML EGYCRLGL+E+ +++V +M++NGF P+VATYG LANG++ AR
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Query: 363 KPGEALLLWNEVKERCA--------------SLPPLRPDEGLLDALADVCVRAAFFKKAL 500
KPG+ALLLW E+KERCA + P L+PDEGLLD LAD+CVRAAFFKKAL
Sbjct: 644 KPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKAL 703
Query: 501 EIVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLP 680
EI+ACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQAR DRR RKRAAEAFKFWLGLP
Sbjct: 704 EIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLP 763
Query: 681 NSYYGSEWRLEP 716
NSYYGSEW+L P
Sbjct: 764 NSYYGSEWKLGP 775
Score = 66.2 bits (160), Expect = 2e-08
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Frame = +3
Query: 39 IDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKLDRV 218
+ D+A L + P +V+YTT++ AF +G A +V EM + V +R+
Sbjct: 430 VADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR-MGVPANRI 488
Query: 219 AYNMLTEGYCRLGLLEEGKKIVEKMRQN-GFEPDVATYGCLANGIALARKPGEALLLWNE 395
YN+L +GYC+ ++ + ++ +M ++ G EPDV +Y + +G L AL +NE
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548
Query: 396 VKER-------------------------------CASLPPLRPDEGLLDALADVCVRAA 482
++ R + P ++ D + L + R
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 483 FFKKALEIVACMEENGISPNKTKY 554
+ A +V+ M+ENG PN Y
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATY 632
>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
gi|557108800|gb|ESQ49107.1| hypothetical protein
EUTSA_v10020113mg [Eutrema salsugineum]
Length = 777
Score = 393 bits (1009), Expect = e-107
Identities = 189/252 (75%), Positives = 219/252 (86%), Gaps = 14/252 (5%)
Frame = +3
Query: 3 VSYNILIDGCILIDDSAGALAYFNEMRAQGIAPSKVSYTTLMKAFALSGQPKLAHKVFDE 182
VSYNI+IDGCILIDDSAGAL++FNEMR +GIAP+K+SYTTLMKAFA+SGQPKLA++VFDE
Sbjct: 523 VSYNIIIDGCILIDDSAGALSFFNEMRTKGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 582
Query: 183 MEKDPRVKLDRVAYNMLTEGYCRLGLLEEGKKIVEKMRQNGFEPDVATYGCLANGIALAR 362
M +DPRVK+D +A+NML EGYCRLGL+E+ K++V +M++NGF P+VATYG LANG++LAR
Sbjct: 583 MMRDPRVKVDLIAWNMLVEGYCRLGLIEDAKRVVSRMKENGFYPNVATYGSLANGVSLAR 642
Query: 363 KPGEALLLWNEVKERC--------------ASLPPLRPDEGLLDALADVCVRAAFFKKAL 500
KPGEALLLW E+KERC S L+PDEGLLD LAD+CVRAAFFKKAL
Sbjct: 643 KPGEALLLWKEIKERCEVKKREESEGHSTDPSPSMLKPDEGLLDMLADICVRAAFFKKAL 702
Query: 501 EIVACMEENGISPNKTKYKRIYVEMHSRMFTSKHASQARQDRRKGRKRAAEAFKFWLGLP 680
EI+ACMEENGI PNKTKYK+IYVEMHSRMFTSKHASQAR +RR RKRAAEAFKFWLGLP
Sbjct: 703 EIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARVERRVERKRAAEAFKFWLGLP 762
Query: 681 NSYYGSEWRLEP 716
NSYYGSEW+L P
Sbjct: 763 NSYYGSEWKLGP 774