BLASTX nr result
ID: Zingiber25_contig00021227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00021227
(323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 111 9e-23
gb|EXB99559.1| Glycine--tRNA ligase 2 [Morus notabilis] 111 1e-22
ref|XP_004306984.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 107 1e-21
ref|XP_003520424.2| PREDICTED: glycine--tRNA ligase 2, chloropla... 107 2e-21
ref|XP_004964270.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 107 2e-21
ref|XP_004964269.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 107 2e-21
ref|XP_002436320.1| hypothetical protein SORBIDRAFT_10g000400 [S... 107 2e-21
ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group] g... 107 2e-21
gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indi... 107 2e-21
gb|EOX96483.1| Glycine-tRNA ligases [Theobroma cacao] 106 3e-21
ref|XP_006656540.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 105 6e-21
ref|XP_006347970.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 105 8e-21
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch... 105 8e-21
ref|XP_004229742.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 104 1e-20
ref|XP_004168165.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 104 1e-20
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 104 1e-20
ref|XP_003561239.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 104 1e-20
gb|ESW06458.1| hypothetical protein PHAVU_010G049600g [Phaseolus... 102 4e-20
ref|XP_002320880.2| hypothetical protein POPTR_0014s04810g [Popu... 102 4e-20
ref|XP_006464414.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 102 5e-20
>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2,
chloroplastic/mitochondrial-like [Vitis vinifera]
gi|297734621|emb|CBI16672.3| unnamed protein product
[Vitis vinifera]
Length = 1071
Score = 111 bits (278), Expect = 9e-23
Identities = 58/99 (58%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = +1
Query: 28 RDHDRSRKFSFCSRLIPSLPRTNDFAAILLSSAPRSQS-ESHRSLVESPVVTFQQAIQRL 204
R + SR S +R+ P AAI S+ P + S + + ++ V TFQQAIQRL
Sbjct: 25 RSRNSSRLCSPFTRISPLRSSKTTIAAITTSAIPHNSSTDPNTDSNKASVPTFQQAIQRL 84
Query: 205 QDYWASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPEPWN 321
Q+YWASVGCA+MQCSNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 85 QEYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN 123
>gb|EXB99559.1| Glycine--tRNA ligase 2 [Morus notabilis]
Length = 1124
Score = 111 bits (277), Expect = 1e-22
Identities = 53/74 (71%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Frame = +1
Query: 103 AAILLSSAPRSQSESHRSLVESP-VVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMN 279
+A+ S+AP+ S+ S ++P V+TFQQAIQRLQ+YWASVGCAIMQCSNTEVGAGTMN
Sbjct: 46 SAVSTSAAPQHSSKDSNSEPQNPSVLTFQQAIQRLQEYWASVGCAIMQCSNTEVGAGTMN 105
Query: 280 PSTFLRVLGPEPWN 321
P T+LRVLGPEPWN
Sbjct: 106 PLTYLRVLGPEPWN 119
>ref|XP_004306984.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 1065
Score = 107 bits (268), Expect = 1e-21
Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
Frame = +1
Query: 28 RDHDRSRKFSF----CSRLIPSLPRTNDFAAILLSSAPRSQSESH--RSLVESPVVTFQQ 189
+ H SR F SRL+ T+ A S+ P S + + ++ V+TFQQ
Sbjct: 14 KPHHSSRLFLLRSAPTSRLLRHFSNTSVSAISTTSALPHQSSTAPIPEASNKASVLTFQQ 73
Query: 190 AIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPEPWN 321
AIQRLQ+YWASVGCAIMQCSNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 74 AIQRLQEYWASVGCAIMQCSNTEVGAGTMNPLTFLRVLGPEPWN 117
>ref|XP_003520424.2| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X1 [Glycine max]
Length = 1099
Score = 107 bits (267), Expect = 2e-21
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +1
Query: 118 SSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFLR 297
SS S S S+ + S +TFQQAIQRLQ+YWASVGC+IMQCSNTEVGAGTMNP T+LR
Sbjct: 84 SSYSSSSSHSNTRSINSSTLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLR 143
Query: 298 VLGPEPWN 321
VLGPEPWN
Sbjct: 144 VLGPEPWN 151
>ref|XP_004964270.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X2 [Setaria italica]
Length = 1070
Score = 107 bits (267), Expect = 2e-21
Identities = 55/91 (60%), Positives = 65/91 (71%)
Frame = +1
Query: 49 KFSFCSRLIPSLPRTNDFAAILLSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVG 228
+FS R P LP ++ AA ++ + + S V+TFQQAIQRLQ+YWASVG
Sbjct: 32 RFSTRHRRRPRLPLSSAPAAADGDASSAVSAANQWGSPTSSVLTFQQAIQRLQEYWASVG 91
Query: 229 CAIMQCSNTEVGAGTMNPSTFLRVLGPEPWN 321
CA+MQCSNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 92 CAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN 122
>ref|XP_004964269.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X1 [Setaria italica]
Length = 1070
Score = 107 bits (267), Expect = 2e-21
Identities = 55/91 (60%), Positives = 65/91 (71%)
Frame = +1
Query: 49 KFSFCSRLIPSLPRTNDFAAILLSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVG 228
+FS R P LP ++ AA ++ + + S V+TFQQAIQRLQ+YWASVG
Sbjct: 32 RFSTRHRRRPRLPLSSAPAAADGDASSAVSAANQWGSPTSSVLTFQQAIQRLQEYWASVG 91
Query: 229 CAIMQCSNTEVGAGTMNPSTFLRVLGPEPWN 321
CA+MQCSNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 92 CAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN 122
>ref|XP_002436320.1| hypothetical protein SORBIDRAFT_10g000400 [Sorghum bicolor]
gi|241914543|gb|EER87687.1| hypothetical protein
SORBIDRAFT_10g000400 [Sorghum bicolor]
Length = 1034
Score = 107 bits (267), Expect = 2e-21
Identities = 55/84 (65%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +1
Query: 76 PSLPRTNDFAAILLSSAPRSQSESH--RSLVESPVVTFQQAIQRLQDYWASVGCAIMQCS 249
P LP + A A S S + R S V+TFQQAIQRLQ+YWASVGCA+MQCS
Sbjct: 47 PRLPLASSAPAAADGDASTSSSSAANPRGSSASSVLTFQQAIQRLQEYWASVGCAVMQCS 106
Query: 250 NTEVGAGTMNPSTFLRVLGPEPWN 321
NTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 107 NTEVGAGTMNPLTFLRVLGPEPWN 130
>ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group]
gi|55296761|dbj|BAD67953.1| putative aminoacyl-t-RNA
synthetase [Oryza sativa Japonica Group]
gi|113594583|dbj|BAF18457.1| Os06g0103600 [Oryza sativa
Japonica Group] gi|222634809|gb|EEE64941.1| hypothetical
protein OsJ_19814 [Oryza sativa Japonica Group]
Length = 1068
Score = 107 bits (266), Expect = 2e-21
Identities = 50/63 (79%), Positives = 54/63 (85%)
Frame = +1
Query: 133 SQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPE 312
S S + + S V+TFQQAIQRLQDYWASVGCA+MQCSNTEVGAGTMNP TFLRVLGPE
Sbjct: 58 SASAATKGPSSSSVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPE 117
Query: 313 PWN 321
PWN
Sbjct: 118 PWN 120
>gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indica Group]
Length = 1068
Score = 107 bits (266), Expect = 2e-21
Identities = 50/63 (79%), Positives = 54/63 (85%)
Frame = +1
Query: 133 SQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPE 312
S S + + S V+TFQQAIQRLQDYWASVGCA+MQCSNTEVGAGTMNP TFLRVLGPE
Sbjct: 58 SASAATKGPSSSSVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPE 117
Query: 313 PWN 321
PWN
Sbjct: 118 PWN 120
>gb|EOX96483.1| Glycine-tRNA ligases [Theobroma cacao]
Length = 1071
Score = 106 bits (265), Expect = 3e-21
Identities = 51/78 (65%), Positives = 59/78 (75%)
Frame = +1
Query: 88 RTNDFAAILLSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGA 267
RT FA S S + + ++ V+TFQQAIQRLQ+YWASVGCA+MQCSNTEVGA
Sbjct: 46 RTTAFAVNTSSIQQNSSTNASDEPQKASVLTFQQAIQRLQEYWASVGCAVMQCSNTEVGA 105
Query: 268 GTMNPSTFLRVLGPEPWN 321
GTMNP T+LRVLGPEPWN
Sbjct: 106 GTMNPLTYLRVLGPEPWN 123
>ref|XP_006656540.1| PREDICTED: glycine--tRNA ligase 2,
chloroplastic/mitochondrial-like, partial [Oryza
brachyantha]
Length = 1029
Score = 105 bits (262), Expect = 6e-21
Identities = 53/69 (76%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 SSAPRS-QSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFL 294
S AP S ++E H S +TFQQAIQRLQDYWASVGCA+MQCSNTEVGAGTMNP TFL
Sbjct: 17 SPAPVSAKAEPH----SSSALTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFL 72
Query: 295 RVLGPEPWN 321
RVLGPEPWN
Sbjct: 73 RVLGPEPWN 81
>ref|XP_006347970.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Solanum tuberosum]
Length = 1063
Score = 105 bits (261), Expect = 8e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = +1
Query: 88 RTNDFAAILLSSAPRSQSESHRS--LVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEV 261
+++ +A+ SS+ S SH S ++ V TFQQAIQRLQ+YW SVGCA+MQCSNTEV
Sbjct: 36 KSSTVSALSTSSSSSSSHVSHNSEHQKKASVPTFQQAIQRLQEYWGSVGCAVMQCSNTEV 95
Query: 262 GAGTMNPSTFLRVLGPEPWN 321
GAGTMNP T+LRVLGPEPWN
Sbjct: 96 GAGTMNPLTYLRVLGPEPWN 115
>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 1069
Score = 105 bits (261), Expect = 8e-21
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +1
Query: 103 AAILLSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNP 282
+A+ S+ SE H++ V TFQQAIQRLQ+YWASVGCA+MQCSNTEVGAGTMNP
Sbjct: 53 SAVQQHSSAGPNSEPHKASVP----TFQQAIQRLQEYWASVGCAVMQCSNTEVGAGTMNP 108
Query: 283 STFLRVLGPEPWN 321
TFLRVLGPEPWN
Sbjct: 109 LTFLRVLGPEPWN 121
>ref|XP_004229742.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Solanum lycopersicum]
Length = 1061
Score = 104 bits (259), Expect = 1e-20
Identities = 48/78 (61%), Positives = 61/78 (78%)
Frame = +1
Query: 88 RTNDFAAILLSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGA 267
+++ +A+ SS+ S + + ++ V TFQQAIQRLQ+YW SVGCA+MQCSNTEVGA
Sbjct: 36 KSSTVSALSTSSSSSHVSHNSENQKKASVPTFQQAIQRLQEYWGSVGCAVMQCSNTEVGA 95
Query: 268 GTMNPSTFLRVLGPEPWN 321
GTMNP T+LRVLGPEPWN
Sbjct: 96 GTMNPLTYLRVLGPEPWN 113
>ref|XP_004168165.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 152
Score = 104 bits (259), Expect = 1e-20
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Frame = +1
Query: 52 FSFCSRLIPSLPRTNDFAAILLSSAPRSQSESHRSL------VESPVVTFQQAIQRLQDY 213
F+FC P F S+ S + H S ++ V+TFQQAIQRLQ+Y
Sbjct: 30 FTFCKS-----PYRRQFNKTCASAITPSTTLHHSSTGSKTYGSKASVLTFQQAIQRLQEY 84
Query: 214 WASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPEPWN 321
WASVGCA+MQCSNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 85 WASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN 120
>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 1068
Score = 104 bits (259), Expect = 1e-20
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Frame = +1
Query: 52 FSFCSRLIPSLPRTNDFAAILLSSAPRSQSESHRSL------VESPVVTFQQAIQRLQDY 213
F+FC P F S+ S + H S ++ V+TFQQAIQRLQ+Y
Sbjct: 30 FTFCKS-----PYRRQFNKTCASAITPSTTLHHSSTGSKTYGSKASVLTFQQAIQRLQEY 84
Query: 214 WASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPEPWN 321
WASVGCA+MQCSNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 85 WASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN 120
>ref|XP_003561239.1| PREDICTED: glycyl-tRNA synthetase 2,
chloroplastic/mitochondrial-like, partial [Brachypodium
distachyon]
Length = 1048
Score = 104 bits (259), Expect = 1e-20
Identities = 55/85 (64%), Positives = 61/85 (71%)
Frame = +1
Query: 67 RLIPSLPRTNDFAAILLSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQC 246
RL+ S +D AA S S S + S +TFQQAIQRLQ+YWASVGCA+MQC
Sbjct: 17 RLLLSARSDSDGAAPTALSFSSSSSSTGEGSSPS-ALTFQQAIQRLQEYWASVGCAVMQC 75
Query: 247 SNTEVGAGTMNPSTFLRVLGPEPWN 321
SNTEVGAGTMNP TFLRVLGPEPWN
Sbjct: 76 SNTEVGAGTMNPLTFLRVLGPEPWN 100
>gb|ESW06458.1| hypothetical protein PHAVU_010G049600g [Phaseolus vulgaris]
Length = 564
Score = 102 bits (255), Expect = 4e-20
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +1
Query: 115 LSSAPRSQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFL 294
LS + + S V S +TFQQAIQRLQ+YWASVGC+IMQCSNTEVGAGTMNP T+L
Sbjct: 54 LSRHSSASALSDNRSVNSSSLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYL 113
Query: 295 RVLGPEPWN 321
RVLGPEPWN
Sbjct: 114 RVLGPEPWN 122
>ref|XP_002320880.2| hypothetical protein POPTR_0014s04810g [Populus trichocarpa]
gi|550323472|gb|EEE99195.2| hypothetical protein
POPTR_0014s04810g [Populus trichocarpa]
Length = 1078
Score = 102 bits (255), Expect = 4e-20
Identities = 47/63 (74%), Positives = 52/63 (82%)
Frame = +1
Query: 133 SQSESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPE 312
S + + + V TFQQAIQRLQ+YWASVGCA+MQCSNTEVGAGTMNP TFLRVLGPE
Sbjct: 68 SSTNPYNEPQNTSVPTFQQAIQRLQEYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPE 127
Query: 313 PWN 321
PWN
Sbjct: 128 PWN 130
>ref|XP_006464414.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 1070
Score = 102 bits (254), Expect = 5e-20
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +1
Query: 139 SESHRSLVESPVVTFQQAIQRLQDYWASVGCAIMQCSNTEVGAGTMNPSTFLRVLGPEPW 318
+E + ++ V TFQQAIQRLQ+YWASVGC++MQCSNTEVGAGTMNP TFLRVLGPEPW
Sbjct: 62 TEPNNERQKASVPTFQQAIQRLQEYWASVGCSVMQCSNTEVGAGTMNPLTFLRVLGPEPW 121
Query: 319 N 321
N
Sbjct: 122 N 122