BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00021209
         (729 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   130   3e-28
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   130   3e-28
emb|CBI37456.3| unnamed protein product [Vitis vinifera]              130   6e-28
gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma...   124   3e-26
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-...   123   5e-26
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...   123   5e-26
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus...   123   7e-26
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr...   123   7e-26
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu...   115   1e-23
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-...   113   6e-23
gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus pe...   112   1e-22
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-...   110   4e-22
ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|...   108   2e-21
ref|XP_002439140.1| hypothetical protein SORBIDRAFT_09g001260 [S...   108   2e-21
ref|XP_006398214.1| hypothetical protein EUTSA_v10000781mg [Eutr...   107   4e-21
ref|XP_006283088.1| hypothetical protein CARUB_v10004104mg [Caps...   106   9e-21
ref|XP_004960524.1| PREDICTED: replication protein A 70 kDa DNA-...   105   2e-20
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...   104   3e-20
ref|NP_567576.2| Replication factor-A protein 1-related [Arabido...   104   3e-20
emb|CAA16702.1| replication A protein-like [Arabidopsis thaliana...   104   3e-20

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Vitis vinifera]
          Length = 882

 Score =  130 bits (328), Expect = 3e-28
 Identities = 92/240 (38%), Positives = 110/240 (45%), Gaps = 42/240 (17%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD KF EI+R  +F +Y FKLKVKEE FSDEQRVKSTVVK E++N S+ESRF+L ++E
Sbjct: 651  EQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVE 710

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVE---SNCNIYAATN--NYSPFHNTDGYRM 383
            K   ED         TF   SE   S  G       N  I  +T   NYS   +  G   
Sbjct: 711  KHKVED--------STFPLKSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDF 762

Query: 382  GAPTNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSD---- 215
            G P NQ  Q+ N YG           +   CN+CGG GHS  NCP  ++   Q S     
Sbjct: 763  GFPANQGVQHGNQYGSSGLSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYV 822

Query: 214  -----------------------------PGAGTFAAAYGGSGTS----GRFTRQHVGGF 134
                                         PG  T   AYG SG +      F +Q VGGF
Sbjct: 823  SRASTGPSAGGTTGECYKCHQFGHWARDCPGLNTGPPAYGSSGVNSGSYSSFAKQRVGGF 882


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  130 bits (328), Expect = 3e-28
 Identities = 92/240 (38%), Positives = 110/240 (45%), Gaps = 42/240 (17%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD KF EI+R  +F +Y FKLKVKEE FSDEQRVKSTVVK E++N S+ESRF+L ++E
Sbjct: 651  EQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVE 710

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVE---SNCNIYAATN--NYSPFHNTDGYRM 383
            K   ED         TF   SE   S  G       N  I  +T   NYS   +  G   
Sbjct: 711  KHKVED--------STFPLKSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDF 762

Query: 382  GAPTNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSD---- 215
            G P NQ  Q+ N YG           +   CN+CGG GHS  NCP  ++   Q S     
Sbjct: 763  GFPANQGVQHGNQYGSSGLSATGSTGMXQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYV 822

Query: 214  -----------------------------PGAGTFAAAYGGSGTS----GRFTRQHVGGF 134
                                         PG  T   AYG SG +      F +Q VGGF
Sbjct: 823  SRASTGPSAGGTTGECYKCHQFGHWARDCPGLNTGPPAYGSSGVNSGSYSSFAKQRVGGF 882


>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score =  130 bits (326), Expect = 6e-28
 Identities = 87/204 (42%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD KF EI+R  +F +Y FKLKVKEE FSDEQRVKSTVVK E++N S+ESRF+L ++E
Sbjct: 472  EQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVE 531

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVE---SNCNIYAATN--NYSPFHNTDGYRM 383
            K   ED         TF   SE   S  G       N  I  +T   NYS   +  G   
Sbjct: 532  KHKVED--------STFPLKSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDF 583

Query: 382  GAPTNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAG 203
            G P NQ  Q+ N YG           +   CN+CGG GHS  NCP  +    +QS  G  
Sbjct: 584  GFPANQGVQHGNQYGSSGLSATGSTGMYQSCNSCGGTGHSSSNCP-SVMHSPRQSSGGGY 642

Query: 202  TFAAAYGGS--GTSGRFTRQHVGG 137
               A+ G S  GT+G   + H  G
Sbjct: 643  VSRASTGPSAGGTTGECYKCHQFG 666


>gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma cacao]
          Length = 911

 Score =  124 bits (311), Expect = 3e-26
 Identities = 76/169 (44%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
 Frame = -3

Query: 724  QDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIEK 545
            Q+D KF EI R  +F++Y+FKLKVKEETFSDEQRVKSTVVKVE++N S+ESR++L LI+K
Sbjct: 693  QNDEKFMEITRQVMFNKYMFKLKVKEETFSDEQRVKSTVVKVEKVNFSSESRYLLDLIDK 752

Query: 544  FSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFH--NTDGYRMGAPT 371
                   + A     FAS +EI+T  +G        Y    N    H   T G   G P 
Sbjct: 753  -------IKANDSSCFASKAEITTPNHGM------DYTGIGNDISRHLAPTAGREYGLPA 799

Query: 370  NQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQ 224
             Q  QY N Y G  +       + + CN+CG  GHS  NCP  +N  AQ
Sbjct: 800  YQGGQYGNQYSG-SRLRETAASMDVFCNSCGVTGHSSTNCPTFMNGPAQ 847


>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 425

 Score =  123 bits (309), Expect = 5e-26
 Identities = 77/199 (38%), Positives = 104/199 (52%), Gaps = 2/199 (1%)
 Frame = -3

Query: 727 EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
           EQDD KFAEIIR  +F +++ KLK+KEETFSDEQRV+STVVK E IN S+ESRF+L L+E
Sbjct: 211 EQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLME 270

Query: 547 KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGY--RMGAP 374
           K   E+ +       +    +E +   +G  ++           SP  N+  +    G P
Sbjct: 271 KLKPENSS-------SATPKAESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTP 323

Query: 373 TNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFA 194
            NQ  QY N Y               +CN+CGG+GHS  NCP  ++  A     G  +  
Sbjct: 324 -NQGVQYGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQ 382

Query: 193 AAYGGSGTSGRFTRQHVGG 137
           A+    GTSG   + H  G
Sbjct: 383 ASGPSGGTSGECFKCHQTG 401


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 861

 Score =  123 bits (309), Expect = 5e-26
 Identities = 77/199 (38%), Positives = 104/199 (52%), Gaps = 2/199 (1%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD KFAEIIR  +F +++ KLK+KEETFSDEQRV+STVVK E IN S+ESRF+L L+E
Sbjct: 647  EQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLME 706

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGY--RMGAP 374
            K   E+ +       +    +E +   +G  ++           SP  N+  +    G P
Sbjct: 707  KLKPENSS-------SATPKAESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTP 759

Query: 373  TNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFA 194
             NQ  QY N Y               +CN+CGG+GHS  NCP  ++  A     G  +  
Sbjct: 760  -NQGVQYGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQ 818

Query: 193  AAYGGSGTSGRFTRQHVGG 137
            A+    GTSG   + H  G
Sbjct: 819  ASGPSGGTSGECFKCHQTG 837


>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
          Length = 866

 Score =  123 bits (308), Expect = 7e-26
 Identities = 83/208 (39%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD++FAEIIR  +F +Y+FKLKVKEETFSDEQRVKSTVVK E++N +++SR  L LI+
Sbjct: 639  EQDDVRFAEIIRKILFTEYVFKLKVKEETFSDEQRVKSTVVKAEKVNYASKSRVSLELID 698

Query: 547  KF--------SNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDG 392
            K         +   +++S  A      T +++ S Y +++S      +TN+   F     
Sbjct: 699  KLLTGKSEGTTTVPNSLSGNAGQGSVETRQVTPSAYNTIKS------STNSSRDF----- 747

Query: 391  YRMGAPTNQ-SAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSD 215
               G P NQ   QY N YG     +         C NCGG+GH+   CP   N   Q S 
Sbjct: 748  ---GMPANQVGQQYGNQYGNF--GSAGAPSAYTSCTNCGGSGHTSMLCPNIRNLPGQSSG 802

Query: 214  PGAGTFAAAYGGS--GTSGRFTRQHVGG 137
             G     A+YGGS  G SG   + H  G
Sbjct: 803  GGFSN-RASYGGSGGGASGECFKCHQPG 829


>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
            gi|568834454|ref|XP_006471343.1| PREDICTED: replication
            protein A 70 kDa DNA-binding subunit C-like [Citrus
            sinensis] gi|557534678|gb|ESR45796.1| hypothetical
            protein CICLE_v10000254mg [Citrus clementina]
          Length = 858

 Score =  123 bits (308), Expect = 7e-26
 Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            +Q+D KF E++R   F +YLFKLKVKEETFSDEQRVKSTVVK ER N S+E+RF+L L++
Sbjct: 624  DQNDEKFGEVVRNATFTKYLFKLKVKEETFSDEQRVKSTVVKAERYNYSSETRFILDLMD 683

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
            K  + D    A          E++ +  G++ S         NY   ++  G   G   N
Sbjct: 684  KLKSGDSTSFALKAENIIPKPEMTYTGTGNIGSR-QTAPVVANYVGNNSNAGAASGLLAN 742

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPG-AGTFAA 191
            Q  QY N Y G        +  +  C++CG  GHS  NCP  ++   Q S  G A +F++
Sbjct: 743  QMGQYGNQYSGSRLPAAGTSAARQSCSSCGAVGHSSMNCPSIMSGPGQSSGGGYANSFSS 802

Query: 190  AYGGSGTS 167
              G + +S
Sbjct: 803  GAGIAASS 810


>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
            gi|550342884|gb|EEE79356.2| hypothetical protein
            POPTR_0003s10170g [Populus trichocarpa]
          Length = 854

 Score =  115 bits (288), Expect = 1e-23
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 23/221 (10%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            +QDD  F++++R  +F +Y+FKLKVKEETFSDEQRVKSTVVK E++N S++SR +L ++E
Sbjct: 639  QQDDEGFSKVLRQVLFSRYVFKLKVKEETFSDEQRVKSTVVKSEKVNYSSQSRLLLDMME 698

Query: 547  KF-SNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTD-GYRMGAP 374
            KF S  D + +  A  ++ +   ++ ++ G+  S     A     +P  +T     +G P
Sbjct: 699  KFKSGNDTSFACKAESSYHNPG-VNNAVIGNFGSR---QAGPPGSNPVGSTSYTGNVGLP 754

Query: 373  TNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQ--------- 221
             NQ  QY N    +     +    +  CN+CG   HS  NCP  +N   Q          
Sbjct: 755  ANQLGQYGNQQNPMFPMQSSSGAYR-SCNSCGATSHSSANCPSMVNAPGQSMGGSYANRT 813

Query: 220  SDPGAGTFAAAY------------GGSGTSGRFTRQHVGGF 134
            S  G G     +              SG  G  ++QHVGGF
Sbjct: 814  SQGGTGECYKCHQVGHWARDCPGLSSSGKMGGISKQHVGGF 854


>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cicer arietinum]
          Length = 917

 Score =  113 bits (283), Expect = 6e-23
 Identities = 75/197 (38%), Positives = 102/197 (51%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            E DD +FAEIIR  +F +Y+FKLKVKEET+ DEQRVKSTVVK E++  ++ESRF+L LI+
Sbjct: 654  EHDDERFAEIIRKVLFTKYVFKLKVKEETYGDEQRVKSTVVKAEKVIFASESRFLLDLID 713

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
            K  +E       A G   ++   +T +    ++   +Y   N   P  NT G   G P N
Sbjct: 714  KLKSEK------AEGATINSVINNTGLGSFGQTTPPVY---NPIKPNTNT-GRDYGMPAN 763

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            Q  QY N Y   +  +       + C+NCG +GHS   C    N   Q +    G   +A
Sbjct: 764  QVGQYGNQYSSSVASSAAPGS-YVSCSNCGASGHSSAQCLNLRNQSGQSTGAAYGNRVSA 822

Query: 187  YGGSGTSGRFTRQHVGG 137
             G    SG   + H  G
Sbjct: 823  -GSGAASGDCYKCHQPG 838


>gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
          Length = 838

 Score =  112 bits (280), Expect = 1e-22
 Identities = 70/198 (35%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD KF EI R  +F ++ FKLK+KEE + DEQRVKSTV+K E++N S+E+R  L L+ 
Sbjct: 608  EQDDEKFVEITRKVLFTKFNFKLKIKEEIYGDEQRVKSTVLKAEKVNFSSEARVHLELMN 667

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
            K   E  + SA        ++ ++ +  G+  S          Y   +N  G   G P +
Sbjct: 668  KLKMETISSSASEGDNVMPSAGMNATGVGNTASRQPTLDVNVGY---NNNAGREFGGPES 724

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            Q   Y N +      +       L CN+CG  GHS  NCP  +N   Q S  G     ++
Sbjct: 725  QGVTYRNQFSSARSPSTGSVGSYLSCNSCGDAGHSSMNCPSVMNGPGQSSGAGYNNRVSS 784

Query: 187  YGGSG-TSGRFTRQHVGG 137
              G G TSG   + H  G
Sbjct: 785  RPGVGNTSGDCYKCHQPG 802


>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Solanum lycopersicum]
          Length = 899

 Score =  110 bits (276), Expect = 4e-22
 Identities = 83/262 (31%), Positives = 118/262 (45%), Gaps = 64/262 (24%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            EQDD +FAEI+R  +F+Q++FKLKVKEE +SDEQRVKSTVVK E +N   E+RF+  LI 
Sbjct: 638  EQDDDRFAEIMRNVLFNQFIFKLKVKEEMYSDEQRVKSTVVKAEMLNFQQETRFLFDLIN 697

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGS-VESNCNIYAA------------------- 428
            K + ++ +      G     S  + + +G+ ++   N  A+                   
Sbjct: 698  KINGQESSTLTPKTGDATPNSGFNNAGFGNKLKEPMNPVASYGGSHISRDSGLQGNRQGP 757

Query: 427  ------TNNYSPFHNTDG---YRMGAPTNQSAQYSNNYGGVIKQNFNQNE-VQLHCNNCG 278
                   + ++P  +T G      G   N+  QY N   G        +  + + CN+CG
Sbjct: 758  YGNQLIGSQFAPSGSTAGSISRESGLQGNRQGQYGNQPSGTQNAPTGSSAGMYMSCNSCG 817

Query: 277  GNGHSFQNCPRGINWQAQQSDPGAG---TFAAAYGGSG---------------------- 173
            G GHS  NCP  ++ Q+Q    G G   T   + GG G                      
Sbjct: 818  GTGHSASNCPSMMSGQSQAYGSGFGNRATSGMSSGGGGGECYKCHQYGHWARDCPGVSNA 877

Query: 172  ------TSGRF---TRQHVGGF 134
                  TSGR+    RQHVGGF
Sbjct: 878  PAANNMTSGRYGNTPRQHVGGF 899


>ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|gb|ACG44321.1| DNA
            binding protein [Zea mays] gi|223945267|gb|ACN26717.1|
            unknown [Zea mays] gi|413942327|gb|AFW74976.1| DNA
            binding protein [Zea mays]
          Length = 876

 Score =  108 bits (269), Expect = 2e-21
 Identities = 67/206 (32%), Positives = 102/206 (49%)
 Frame = -3

Query: 724  QDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIEK 545
            +D  +FAEI++   + Q+LF LKVKEE ++D  +VK  + K E+++P+ ES ++LG+I  
Sbjct: 651  EDSERFAEILQAARWQQFLFTLKVKEEIYNDAPQVKCNITKAEKLDPAIESSYLLGVING 710

Query: 544  FSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTNQ 365
               +D    +GA G  A  + IS +  G           T+N +   N  G R G   NQ
Sbjct: 711  LLQDDTGSPSGAQGAMAYNAGISNTGAGR-------SVPTSNSAYTTNLSGPRYGESANQ 763

Query: 364  SAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAAY 185
             AQ  + Y GV         VQ  C +CG +GH+ QNCP G  ++ Q +   A ++  + 
Sbjct: 764  LAQQESTYTGVTTPVSAARNVQQTCVSCGSSGHNVQNCPAG-TYRQQAAASAASSYGTSQ 822

Query: 184  GGSGTSGRFTRQHVGGF*NSVHSVCP 107
              +G    F     G F NS   + P
Sbjct: 823  PRNGLC--FKCNQPGHFANSCPLLAP 846


>ref|XP_002439140.1| hypothetical protein SORBIDRAFT_09g001260 [Sorghum bicolor]
            gi|190688743|gb|ACE86406.1| replication protein A1-like
            protein [Sorghum bicolor] gi|241944425|gb|EES17570.1|
            hypothetical protein SORBIDRAFT_09g001260 [Sorghum
            bicolor]
          Length = 933

 Score =  108 bits (269), Expect = 2e-21
 Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            E+D  +FAEI++   + Q+LFKLKV EET++DE RVK  +++ E+++P+ ES ++LG+I 
Sbjct: 689  EEDPERFAEILQGVRWQQFLFKLKVYEETYNDEHRVKCNILRAEKLDPAKESSYLLGVIN 748

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
                +D    + A G  A  + +S +  G           T+N +   N  G R G   N
Sbjct: 749  GLLQDDTGSPSEAQGPMAYNAGLSNTGAGR-------SVPTSNSAYTTNMSGPRYGESAN 801

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            Q AQ +N Y G          VQ  C +CG +GH+ QNCP G+     +  P A T A++
Sbjct: 802  QFAQQANTYIGASTPVSATRNVQT-CMSCGSSGHNAQNCPAGM----YKQQPAAST-ASS 855

Query: 187  YGGS-----GTSGRFTRQHVGGF*NSVHSVCP 107
            YG S     G    F    +G F +S   + P
Sbjct: 856  YGSSQPRNTGPRPCFKCNQIGHFADSCPLLAP 887


>ref|XP_006398214.1| hypothetical protein EUTSA_v10000781mg [Eutrema salsugineum]
            gi|557099303|gb|ESQ39667.1| hypothetical protein
            EUTSA_v10000781mg [Eutrema salsugineum]
          Length = 799

 Score =  107 bits (267), Expect = 4e-21
 Identities = 74/203 (36%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            ++D+ KF +IIR   F +Y+FKLK+KEET+SDEQRVK+TVVK E++N S+++RF+L  I 
Sbjct: 618  DRDEDKFEDIIRKAAFTKYIFKLKIKEETYSDEQRVKATVVKAEKVNYSSDTRFLLDAIN 677

Query: 547  KFSNEDH-----NVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRM 383
            K   ED      N    +HG+ A  S I TS  G+ E++           P  N    ++
Sbjct: 678  KLRTEDANPLPINQVTSSHGSGAFNSGIGTS--GTRETSSVDVPRREIRLPAAN----QV 731

Query: 382  GAPTNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAG 203
                N+    S   GG+            +CN CGGNGH+  NCP      +  S+P   
Sbjct: 732  SQFGNEHTSGSRPLGGI-----------TYCNACGGNGHAADNCP------SFMSEPQGQ 774

Query: 202  TFAAAY---GGSGTSGRFTRQHV 143
              ++AY    G   +G   RQHV
Sbjct: 775  HTSSAYRSTPGGYAAGGMPRQHV 797


>ref|XP_006283088.1| hypothetical protein CARUB_v10004104mg [Capsella rubella]
            gi|482551793|gb|EOA15986.1| hypothetical protein
            CARUB_v10004104mg [Capsella rubella]
          Length = 879

 Score =  106 bits (264), Expect = 9e-21
 Identities = 71/198 (35%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
 Frame = -3

Query: 724  QDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIEK 545
            +++ KF  IIR   F +Y+FKLKVKEETFSDEQRVK+TVVKV+++N S+++R +L  ++K
Sbjct: 701  EEEEKFESIIRNVAFTKYIFKLKVKEETFSDEQRVKATVVKVDKVNYSSDTRTILDAMDK 760

Query: 544  FSNED-HNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
              N D  ++     G+  S   ++TS+  S          T + S     D    G   +
Sbjct: 761  LRNIDATSLPIKPEGSNYSAEAVNTSIRSS---------GTRDPSSVDRRD---FGLHAH 808

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            QS QY N Y      +         CN CG +GH   NCP     Q Q         + +
Sbjct: 809  QSGQYGNQYS---SGSGAHGGGATSCNVCGNSGHVSANCPSANEPQGQYMGNSYRGTSGS 865

Query: 187  YGGSGTSGRFTRQHVGGF 134
            YGG G      RQHVG +
Sbjct: 866  YGGGGP----PRQHVGSY 879


>ref|XP_004960524.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Setaria italica]
          Length = 1002

 Score =  105 bits (262), Expect = 2e-20
 Identities = 69/205 (33%), Positives = 105/205 (51%)
 Frame = -3

Query: 727  EQDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIE 548
            E+D  +FA+II+   + Q+LFKLKV EETF+DEQRVK ++VK E+++ S E  ++L  I 
Sbjct: 788  EEDTERFADIIQGVRWQQFLFKLKVYEETFNDEQRVKCSIVKAEKLDLSRECSYLLKGIG 847

Query: 547  KFSNEDHNVSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
                +D    +   G  A ++ ++TS  G      N   AT+  +P       R G   N
Sbjct: 848  ALLQDDTGSPSEVQGAMAYSAGLNTSGAGQGMPASNSAYATSMGTP-------RYGETGN 900

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            Q  Q +N YGGV         V+  C  CG +GH+ Q+CP  +  Q Q +   A ++ ++
Sbjct: 901  QLGQQANTYGGVSTPLSATRNVET-CMGCGSSGHNAQSCPASMYRQQQPAANTASSYVSS 959

Query: 187  YGGSGTSGRFTRQHVGGF*NSVHSV 113
             G +G+   F     G F N+   V
Sbjct: 960  PGDAGSGRCFRCNQPGHFANACPGV 984


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 901

 Score =  104 bits (259), Expect = 3e-20
 Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 9/205 (4%)
 Frame = -3

Query: 724  QDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIEK 545
            QDD  F++I+R  +F +++ KLKVKEETFSDEQRVKSTVV+ E++N S++SRF+L ++EK
Sbjct: 665  QDDESFSKILRQVLFSKFVIKLKVKEETFSDEQRVKSTVVRAEKVNHSSQSRFLLEIMEK 724

Query: 544  FSNED-----HNVSAGAHGTFAST--SEISTSMYGSVESNCNIYAATNNYSPFHNTDGYR 386
            + + +      NV +    + A+T    I + + GS+ SN       ++++         
Sbjct: 725  YKSGNSIPSASNVESNYPNSGANTGIDSIGSRIGGSLNSN---QVGKSSFA------ARE 775

Query: 385  MGAPTNQSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPG- 209
             G  TNQ  QY N +      +       L C +CG   HS  NCP  IN   +QS  G 
Sbjct: 776  FGLQTNQVGQYGNQFSAGYPTH------NLSCISCGATSHSSANCPSTIN-APRQSAGGF 828

Query: 208  -AGTFAAAYGGSGTSGRFTRQHVGG 137
             A   ++  G +G  G   + H  G
Sbjct: 829  YANQPSSLAGSAGAGGECYKCHQVG 853


>ref|NP_567576.2| Replication factor-A protein 1-related [Arabidopsis thaliana]
            gi|519882414|sp|F4JSG3.1|RFA1E_ARATH RecName:
            Full=Replication protein A 70 kDa DNA-binding subunit E;
            Short=AtRPA70E; AltName: Full=AtRPA1-1; AltName:
            Full=Replication factor A protein 1E; AltName:
            Full=Replication protein A 1E; Short=AtRPA1E
            gi|332658747|gb|AEE84147.1| Replication factor-A protein
            1-related [Arabidopsis thaliana]
          Length = 784

 Score =  104 bits (259), Expect = 3e-20
 Identities = 71/198 (35%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
 Frame = -3

Query: 724  QDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIEK 545
            +D+ KF +IIR   F +Y FKLKVKEETFSDEQRVK+TVVKV+++N SA++R +LG ++K
Sbjct: 610  KDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDK 669

Query: 544  FSNEDHN-VSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
                D N +     G+  +   ++T +  S          T + S     D    G   +
Sbjct: 670  LRTRDANSLPINPEGSDYNADVVNTGIGSS---------GTRDPSSVQRRD---FGLHAH 717

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            QS Q  N+Y G              CN CG +GH    CP G     +Q     G++   
Sbjct: 718  QSGQSGNHYSG--------GGATTSCNVCGNSGHVSAKCP-GATKPQEQGQYMGGSYRGT 768

Query: 187  YGGSGTSGRFTRQHVGGF 134
             G  G  G   RQHVG +
Sbjct: 769  TGSYG--GGLPRQHVGSY 784


>emb|CAA16702.1| replication A protein-like [Arabidopsis thaliana]
            gi|7268708|emb|CAB78915.1| replication A protein-like
            [Arabidopsis thaliana]
          Length = 717

 Score =  104 bits (259), Expect = 3e-20
 Identities = 71/198 (35%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
 Frame = -3

Query: 724  QDDMKFAEIIRTGIFHQYLFKLKVKEETFSDEQRVKSTVVKVERINPSAESRFVLGLIEK 545
            +D+ KF +IIR   F +Y FKLKVKEETFSDEQRVK+TVVKV+++N SA++R +LG ++K
Sbjct: 543  KDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDK 602

Query: 544  FSNEDHN-VSAGAHGTFASTSEISTSMYGSVESNCNIYAATNNYSPFHNTDGYRMGAPTN 368
                D N +     G+  +   ++T +  S          T + S     D    G   +
Sbjct: 603  LRTRDANSLPINPEGSDYNADVVNTGIGSS---------GTRDPSSVQRRD---FGLHAH 650

Query: 367  QSAQYSNNYGGVIKQNFNQNEVQLHCNNCGGNGHSFQNCPRGINWQAQQSDPGAGTFAAA 188
            QS Q  N+Y G              CN CG +GH    CP G     +Q     G++   
Sbjct: 651  QSGQSGNHYSG--------GGATTSCNVCGNSGHVSAKCP-GATKPQEQGQYMGGSYRGT 701

Query: 187  YGGSGTSGRFTRQHVGGF 134
             G  G  G   RQHVG +
Sbjct: 702  TGSYG--GGLPRQHVGSY 717