BLASTX nr result

ID: Zingiber25_contig00021109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00021109
         (514 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006452240.1| hypothetical protein CICLE_v10009906mg [Citr...    58   1e-06
ref|XP_002305590.2| hypothetical protein POPTR_0004s01820g [Popu...    55   1e-05
gb|ABK93184.1| unknown [Populus trichocarpa]                           55   1e-05

>ref|XP_006452240.1| hypothetical protein CICLE_v10009906mg [Citrus clementina]
           gi|557555466|gb|ESR65480.1| hypothetical protein
           CICLE_v10009906mg [Citrus clementina]
          Length = 126

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
 Frame = +1

Query: 127 SPVEIGARGTIGALVSKEIAYFEML----NPGHHEPSSQKLDQVSTQVAXXXXXXXXXXX 294
           +PVE+G RGT+G+L+ KEI YF  L      G H P +   +  S+              
Sbjct: 21  TPVEVGTRGTVGSLIMKEIEYFSQLELRCQDGSHRPQTHVTEMASSS----------SHC 70

Query: 295 XXXXXXXXXXXXXXXXXXGFLPSICSAVDAIDTSQSEKVTGISYRNLRT 441
                               LPSICS V+ +D SQ   ++G SYRNL++
Sbjct: 71  GPTATSVTTTQKKKKRRGNRLPSICSMVEVLDKSQPIGISGFSYRNLKS 119


>ref|XP_002305590.2| hypothetical protein POPTR_0004s01820g [Populus trichocarpa]
           gi|550340107|gb|EEE86101.2| hypothetical protein
           POPTR_0004s01820g [Populus trichocarpa]
          Length = 127

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/104 (33%), Positives = 47/104 (45%)
 Frame = +1

Query: 127 SPVEIGARGTIGALVSKEIAYFEMLNPGHHEPSSQKLDQVSTQVAXXXXXXXXXXXXXXX 306
           +PV IG RGT+G+LV KEI YF          S +  +QV    A               
Sbjct: 20  APVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQV----ADIASSNGQSRPSFWS 75

Query: 307 XXXXXXXXXXXXXXGFLPSICSAVDAIDTSQSEKVTGISYRNLR 438
                         GFLPSICSAV+  D+++  ++ G SYR L+
Sbjct: 76  LTMSWKRKKRRGSSGFLPSICSAVEVADSNRLSRIPGFSYRILK 119


>gb|ABK93184.1| unknown [Populus trichocarpa]
          Length = 112

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/104 (33%), Positives = 47/104 (45%)
 Frame = +1

Query: 127 SPVEIGARGTIGALVSKEIAYFEMLNPGHHEPSSQKLDQVSTQVAXXXXXXXXXXXXXXX 306
           +PV IG RGT+G+LV KEI YF          S +  +QV    A               
Sbjct: 5   APVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQV----ADIASSNGQSRPSFWS 60

Query: 307 XXXXXXXXXXXXXXGFLPSICSAVDAIDTSQSEKVTGISYRNLR 438
                         GFLPSICSAV+  D+++  ++ G SYR L+
Sbjct: 61  LTMSWKRKKRRGSSGFLPSICSAVEVADSNRLSRIPGFSYRILK 104


Top