BLASTX nr result

ID: Zingiber25_contig00020891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020891
         (713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE70097.1| hypothetical protein OsJ_30101 [Oryza sativa Japo...    86   2e-14
gb|EEC84928.1| hypothetical protein OsI_32136 [Oryza sativa Indi...    84   3e-14
gb|AFW85105.1| hypothetical protein ZEAMMB73_878157 [Zea mays]         79   1e-12
tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea m...    74   5e-11
tpg|DAA57608.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea m...    74   5e-11
ref|NP_001132826.1| uncharacterized protein LOC100194316 [Zea ma...    74   5e-11
ref|XP_006653917.1| PREDICTED: zinc finger CCCH domain-containin...    73   1e-10
ref|XP_002458476.1| hypothetical protein SORBIDRAFT_03g034370 [S...    70   7e-10
gb|EMT32909.1| Zinc finger CCCH domain-containing protein 44 [Ae...    66   1e-08

>gb|EEE70097.1| hypothetical protein OsJ_30101 [Oryza sativa Japonica Group]
          Length = 1764

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 64/218 (29%), Positives = 89/218 (40%), Gaps = 1/218 (0%)
 Frame = +3

Query: 63   PDVCTPSVDATTKLFVQTDASESILAQRSQASATPNSERMNP-ANFEIPIHMSITNNQMP 239
            P   T S +         +   S L+Q     A  N  ++   A+ E    M  +   + 
Sbjct: 1334 PGPATVSAEVVNSQLQSQNQIASFLSQSDGRLADGNDSKLGEDASRE---RMRSSGEDLG 1390

Query: 240  SSNMTPYGWXXXXXXXXXXXDNTQLLCSNGSNPPSSQFGSNANIVSVKPTQMGFVNGSNI 419
             S   P G            +  Q   SN   P  SQ  S  +  +V+P+      G N 
Sbjct: 1391 LSGAQPGGVQSNTQQLEDARNQLQTDASNSVKP--SQLISTPSAEAVQPSSTAMAGGDNQ 1448

Query: 420  QNSIFPMASQNPSTNPGSTQGTGSWTAVPQGNMNIGWGMVAQNNMNMPWGQTTQTLADFN 599
              +   +AS +  + P +  G  +W A  QGN N+GWGMV QNNMNM WG T Q+   +N
Sbjct: 1449 NTAWAQLASTSGQSQPQAA-GNMTWGATLQGNANMGWGMVGQNNMNMSWGGTAQSATGYN 1507

Query: 600  MGSGVQSQVNPMVNPGWXXXXXXXXXXXXXXXXNTNMN 713
            MG  +Q+Q N + N GW                NTNMN
Sbjct: 1508 MGLAMQAQPNAVPNMGW----------VTPNPGNTNMN 1535


>gb|EEC84928.1| hypothetical protein OsI_32136 [Oryza sativa Indica Group]
          Length = 1764

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 49/131 (37%), Positives = 65/131 (49%)
 Frame = +3

Query: 321  SNGSNPPSSQFGSNANIVSVKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQGTGSWTA 500
            SN   P  SQ  S  +  +V+P+      G N   +   +AS +  + P +  G  +W A
Sbjct: 1418 SNSVKP--SQLISTPSAEAVQPSSTAMAGGDNQNTAWAQLASTSGQSQPQAA-GNMTWGA 1474

Query: 501  VPQGNMNIGWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGWXXXXXXXXXX 680
              QGN N+GWGMV QNNMNM WG T Q+   +NMG  +Q+Q N + N GW          
Sbjct: 1475 TLQGNANMGWGMVGQNNMNMSWGGTAQSATGYNMGLAMQAQPNAVPNMGW---------- 1524

Query: 681  XXXXXXNTNMN 713
                  NTNMN
Sbjct: 1525 VTPNPGNTNMN 1535


>gb|AFW85105.1| hypothetical protein ZEAMMB73_878157 [Zea mays]
          Length = 1704

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 49/133 (36%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
 Frame = +3

Query: 321  SNGSNPPSSQFGSNANIVSVKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQGTGS--W 494
            SN + P  SQ  S  +  SV+P+ +  + GS+ Q+S + + +Q  +T+ G +Q TG+  W
Sbjct: 1461 SNSTMP--SQMMSTPSAASVQPS-LSTIAGSDNQSSGWAVPTQVVNTS-GQSQITGNLTW 1516

Query: 495  TAVPQGNMNIGWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGWXXXXXXXX 674
               PQG+ ++GWGM+ QNNMNMPW  + Q  + +NMG+ + +Q N + N GW        
Sbjct: 1517 GNTPQGDASLGWGMMGQNNMNMPWVASAQGASGYNMGAAMPTQPNAVPNMGW-------- 1568

Query: 675  XXXXXXXXNTNMN 713
                    NTNMN
Sbjct: 1569 ---LPNPGNTNMN 1578


>tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
          Length = 1254

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = +3

Query: 345  SQFGSNANIVSVKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQGTGS--WTAVPQGNM 518
            SQ  S  +  SV+P+        N Q+S + + +Q  +T PG +Q TG+  W   PQG+ 
Sbjct: 940  SQMMSAPSAASVQPSLTTTARSDN-QSSGWAVPAQMANT-PGQSQITGNLTWGNTPQGDA 997

Query: 519  NIGWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGW 650
            ++GWGMV Q+NMNMPW  + Q  + +NMG  + +Q N + N GW
Sbjct: 998  SLGWGMVGQSNMNMPWVASAQGASGYNMGVAMPTQPNAVPNMGW 1041


>tpg|DAA57608.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
          Length = 992

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = +3

Query: 345 SQFGSNANIVSVKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQGTGS--WTAVPQGNM 518
           SQ  S  +  SV+P+        N Q+S + + +Q  +T PG +Q TG+  W   PQG+ 
Sbjct: 678 SQMMSAPSAASVQPSLTTTARSDN-QSSGWAVPAQMANT-PGQSQITGNLTWGNTPQGDA 735

Query: 519 NIGWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGW 650
           ++GWGMV Q+NMNMPW  + Q  + +NMG  + +Q N + N GW
Sbjct: 736 SLGWGMVGQSNMNMPWVASAQGASGYNMGVAMPTQPNAVPNMGW 779


>ref|NP_001132826.1| uncharacterized protein LOC100194316 [Zea mays]
           gi|194695504|gb|ACF81836.1| unknown [Zea mays]
          Length = 427

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = +3

Query: 345 SQFGSNANIVSVKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQGTGS--WTAVPQGNM 518
           SQ  S  +  SV+P+        N Q+S + + +Q  +T PG +Q TG+  W   PQG+ 
Sbjct: 113 SQMMSAPSAASVQPSLTTTARSDN-QSSGWAVPAQMANT-PGQSQITGNLTWGNTPQGDA 170

Query: 519 NIGWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGW 650
           ++GWGMV Q+NMNMPW  + Q  + +NMG  + +Q N + N GW
Sbjct: 171 SLGWGMVGQSNMNMPWVASAQGASGYNMGVAMPTQPNAVPNMGW 214


>ref|XP_006653917.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Oryza
            brachyantha]
          Length = 1718

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
 Frame = +3

Query: 378  VKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQ-----------GTGSWTAVPQGNMNI 524
            VKP Q+   +   +Q S   MA  + + N G TQ           G  +W    QGN N+
Sbjct: 1374 VKPFQLISTSAEAVQPSSTTMAGGD-NQNSGWTQMSSTSGQPQVAGNMTWGTTLQGNANM 1432

Query: 525  GWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGWXXXXXXXXXXXXXXXXNT 704
            GWGM+ QNNMNM WG   Q+   +NMG  +Q+Q N + N GW                NT
Sbjct: 1433 GWGMMGQNNMNMSWGGPAQSATGYNMGLTMQAQTNAVPNMGW----------VTPNPGNT 1482

Query: 705  NMN 713
            NMN
Sbjct: 1483 NMN 1485


>ref|XP_002458476.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
            gi|241930451|gb|EES03596.1| hypothetical protein
            SORBIDRAFT_03g034370 [Sorghum bicolor]
          Length = 1681

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +3

Query: 321  SNGSNPPSSQFGSNANIVSVKPTQMGFVNGSNIQNSIFPMASQNPSTNPGSTQGTGS--W 494
            SN   P  SQ  S  +  SV+P+ +  V GS+ Q+S + + +Q  +T PG +Q TG+  W
Sbjct: 1335 SNSMMP--SQMMSTPSAASVQPS-LTTVAGSDNQSSGWAVPAQVANT-PGQSQITGNMTW 1390

Query: 495  TAVPQGNMNIGWGMVAQNNMNMPWGQTTQTLADFNMGSGVQSQVNPMVNPGW 650
               PQG+ ++GWGM+ Q+NMNMPW  + Q  + + MG  + +Q N + N GW
Sbjct: 1391 GNTPQGDASLGWGMMGQSNMNMPWVASAQGASGY-MGVAMPTQPNAVPNMGW 1441


>gb|EMT32909.1| Zinc finger CCCH domain-containing protein 44 [Aegilops tauschii]
          Length = 1804

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
 Frame = +3

Query: 411  SNIQNSIFPMASQNPSTNPGSTQGTGS--WTAVPQGNMNIGWGMVAQNNMNMPWGQTTQT 584
            ++  NS   M     +   G  QG G+  W +  Q N N+ WGM+ Q NMNMPW    Q 
Sbjct: 1474 TDASNSTQLMTHAQVANTSGQAQGAGNTNWGSTLQSNANMAWGMMGQTNMNMPWAAPAQG 1533

Query: 585  LADFNMGSGVQSQVNPMVNPGWXXXXXXXXXXXXXXXXNTNMN 713
             A +NMG  + +Q N + N GW                NTNMN
Sbjct: 1534 AASYNMGMTMPTQQNAVQNMGW----------VTPNPGNTNMN 1566


Top