BLASTX nr result
ID: Zingiber25_contig00020753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00020753
(377 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK74849.1| plastid RNA-binding protein NUS1 [Oryza sativa J... 67 3e-09
gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryza sativa Japo... 65 7e-09
ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japonica Group] g... 65 7e-09
gb|AFW68093.1| hypothetical protein ZEAMMB73_110134 [Zea mays] 61 1e-07
gb|ACN25985.1| unknown [Zea mays] gi|413933544|gb|AFW68095.1| hy... 61 1e-07
ref|NP_001146783.1| hypothetical protein [Zea mays] gi|219888735... 61 1e-07
gb|AAL73975.1|AF466201_4 hypothetical protein M3E9.200 [Sorghum ... 60 2e-07
ref|XP_006826307.1| hypothetical protein AMTR_s00004p00077740 [A... 60 3e-07
ref|XP_004982259.1| PREDICTED: uncharacterized protein LOC101758... 60 3e-07
ref|XP_003561597.1| PREDICTED: uncharacterized protein LOC100839... 60 3e-07
gb|ACF84193.1| unknown [Zea mays] gi|414872057|tpg|DAA50614.1| T... 59 5e-07
gb|ACF78450.1| unknown [Zea mays] gi|414872056|tpg|DAA50613.1| T... 59 5e-07
ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265... 59 5e-07
emb|CAN61043.1| hypothetical protein VITISV_037528 [Vitis vinifera] 59 5e-07
ref|XP_006488956.1| PREDICTED: uncharacterized protein LOC102627... 59 9e-07
ref|XP_006445559.1| hypothetical protein CICLE_v10015880mg [Citr... 59 9e-07
dbj|BAJ88485.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 9e-07
ref|XP_002466724.1| hypothetical protein SORBIDRAFT_01g012890 [S... 58 1e-06
ref|NP_001150841.1| LOC100284474 [Zea mays] gi|195642298|gb|ACG4... 57 2e-06
gb|EMJ06825.1| hypothetical protein PRUPE_ppa009156mg [Prunus pe... 57 3e-06
>dbj|BAK74849.1| plastid RNA-binding protein NUS1 [Oryza sativa Japonica Group]
Length = 287
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Frame = -3
Query: 204 HKGVVLSSSARNSLPLSPPCAVAEALEQAAETSS---------APGASSPSKVDKSGRFC 52
H ++ S +A S PP AVA + +S AP A +PSKVD+SGRFC
Sbjct: 24 HGRLLASPAAWRSARTLPPRAVASSRATVLVSSPPPPPLPPTPAPAAVAPSKVDRSGRFC 83
Query: 51 SPRAARELALMIAYAAC 1
SPRAARELALMI+YAAC
Sbjct: 84 SPRAARELALMISYAAC 100
>gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryza sativa Japonica Group]
Length = 287
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Frame = -3
Query: 204 HKGVVLSSSARNSLPLSPPCAVAEALEQAAETSS---------APGASSPSKVDKSGRFC 52
H ++ S +A S PP AVA + ++ AP A +PSKVD+SGRFC
Sbjct: 24 HGRLLASPAAWRSARTLPPRAVASSRATVLVSNPPPPPLPPTPAPAAVAPSKVDRSGRFC 83
Query: 51 SPRAARELALMIAYAAC 1
SPRAARELALMI+YAAC
Sbjct: 84 SPRAARELALMISYAAC 100
>ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japonica Group]
gi|31415975|gb|AAP50995.1| unknown protein [Oryza sativa
Japonica Group] gi|108710180|gb|ABF97975.1|
antitermination NusB domain-containing protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113549282|dbj|BAF12725.1| Os03g0656900 [Oryza sativa
Japonica Group] gi|125545109|gb|EAY91248.1| hypothetical
protein OsI_12862 [Oryza sativa Indica Group]
Length = 287
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Frame = -3
Query: 204 HKGVVLSSSARNSLPLSPPCAVAEALEQAAETSS---------APGASSPSKVDKSGRFC 52
H ++ S +A S PP AVA + ++ AP A +PSKVD+SGRFC
Sbjct: 24 HGRLLASPAAWRSARTLPPRAVASSRATVLVSNPPPPPLPPTPAPAAVAPSKVDRSGRFC 83
Query: 51 SPRAARELALMIAYAAC 1
SPRAARELALMI+YAAC
Sbjct: 84 SPRAARELALMISYAAC 100
>gb|AFW68093.1| hypothetical protein ZEAMMB73_110134 [Zea mays]
Length = 140
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 20/82 (24%)
Frame = -3
Query: 186 SSSARNSLPLS--------------PPCAVAEALEQAAETSSAP----GASSPS--KVDK 67
S+ AR SLPL+ PP AVA + +S P G +P+ KVD+
Sbjct: 17 SAGARPSLPLAGLASRRARVLAAPPPPRAVASSRAPLVVSSPPPPEDSGTHNPAHAKVDR 76
Query: 66 SGRFCSPRAARELALMIAYAAC 1
SGRFCSPRAARELALMI+YAAC
Sbjct: 77 SGRFCSPRAARELALMISYAAC 98
>gb|ACN25985.1| unknown [Zea mays] gi|413933544|gb|AFW68095.1| hypothetical protein
ZEAMMB73_110134 [Zea mays]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 20/82 (24%)
Frame = -3
Query: 186 SSSARNSLPLS--------------PPCAVAEALEQAAETSSAP----GASSPS--KVDK 67
S+ AR SLPL+ PP AVA + +S P G +P+ KVD+
Sbjct: 17 SAGARPSLPLAGLASRRARVLAAPPPPRAVASSRAPLVVSSPPPPEDSGTHNPAHAKVDR 76
Query: 66 SGRFCSPRAARELALMIAYAAC 1
SGRFCSPRAARELALMI+YAAC
Sbjct: 77 SGRFCSPRAARELALMISYAAC 98
>ref|NP_001146783.1| hypothetical protein [Zea mays] gi|219888735|gb|ACL54742.1| unknown
[Zea mays] gi|413933543|gb|AFW68094.1| hypothetical
protein ZEAMMB73_110134 [Zea mays]
Length = 292
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 20/82 (24%)
Frame = -3
Query: 186 SSSARNSLPLS--------------PPCAVAEALEQAAETSSAP----GASSPS--KVDK 67
S+ AR SLPL+ PP AVA + +S P G +P+ KVD+
Sbjct: 17 SAGARPSLPLAGLASRRARVLAAPPPPRAVASSRAPLVVSSPPPPEDSGTHNPAHAKVDR 76
Query: 66 SGRFCSPRAARELALMIAYAAC 1
SGRFCSPRAARELALMI+YAAC
Sbjct: 77 SGRFCSPRAARELALMISYAAC 98
>gb|AAL73975.1|AF466201_4 hypothetical protein M3E9.200 [Sorghum bicolor]
Length = 274
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Frame = -3
Query: 186 SSSARNSLPLSPPCAVAEALEQAAETSSAP----GASSPS--KVDKSGRFCSPRAARELA 25
S AR PP AVA + TS P G +P+ KVD+SGRFCSPRAARELA
Sbjct: 31 SRRARALAAPPPPRAVASSRAPLVVTSPPPPEASGTPAPAHAKVDRSGRFCSPRAARELA 90
Query: 24 LMIAYAAC 1
LMI+YAAC
Sbjct: 91 LMISYAAC 98
>ref|XP_006826307.1| hypothetical protein AMTR_s00004p00077740 [Amborella trichopoda]
gi|548830621|gb|ERM93544.1| hypothetical protein
AMTR_s00004p00077740 [Amborella trichopoda]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -3
Query: 156 SPPCAVAEALEQAAETSSAPGASSPSKVDKSGRFCSPRAARELALMIAYAAC 1
+P AV E + +A +SS+ S KVDKSGRFCSPRAAREL+L+I YAAC
Sbjct: 53 APKVAVTEPVTEAVSSSSSVDVKS--KVDKSGRFCSPRAARELSLLILYAAC 102
>ref|XP_004982259.1| PREDICTED: uncharacterized protein LOC101758772 [Setaria italica]
Length = 282
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 7/59 (11%)
Frame = -3
Query: 156 SPPCAVAEALEQAAETSSAPGASSP-------SKVDKSGRFCSPRAARELALMIAYAAC 1
+PP + A A +A S+P +SP +KVD+SGRFCSPRAARELALMI+YAAC
Sbjct: 38 APPPSRAVASSRAPLVVSSPPPASPGPPAAAHAKVDRSGRFCSPRAARELALMISYAAC 96
>ref|XP_003561597.1| PREDICTED: uncharacterized protein LOC100839883 [Brachypodium
distachyon]
Length = 280
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = -3
Query: 213 PVPHKGVVLSS-SARNSLPLSPPCAVAEALEQAAETSSAPGASSPS----KVDKSGRFCS 49
P P K ++ S R+ L PP + S P +P+ KVD+SGRFCS
Sbjct: 20 PRPRKRLLAEPVSGRSPRTLQPPPRTVASSRAPLVVSHPPPTPAPAPGHPKVDRSGRFCS 79
Query: 48 PRAARELALMIAYAAC 1
PRAARELALM+AYAAC
Sbjct: 80 PRAARELALMVAYAAC 95
>gb|ACF84193.1| unknown [Zea mays] gi|414872057|tpg|DAA50614.1| TPA: hypothetical
protein ZEAMMB73_306113 [Zea mays]
Length = 181
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Frame = -3
Query: 186 SSSARNSLPLSP-PCAVAEALEQAAETSSAPGASSPS------KVDKSGRFCSPRAAREL 28
+S +LP P P AVA +S P A+S + KVD+SGRFCSPRAAREL
Sbjct: 30 ASRRARALPAPPLPRAVASTRAPLVVSSPPPPAASGTTAPAHAKVDRSGRFCSPRAAREL 89
Query: 27 ALMIAYAAC 1
ALMI+YAAC
Sbjct: 90 ALMISYAAC 98
>gb|ACF78450.1| unknown [Zea mays] gi|414872056|tpg|DAA50613.1| TPA: RNA binding
protein [Zea mays]
Length = 284
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Frame = -3
Query: 186 SSSARNSLPLSP-PCAVAEALEQAAETSSAPGASSPS------KVDKSGRFCSPRAAREL 28
+S +LP P P AVA +S P A+S + KVD+SGRFCSPRAAREL
Sbjct: 30 ASRRARALPAPPLPRAVASTRAPLVVSSPPPPAASGTTAPAHAKVDRSGRFCSPRAAREL 89
Query: 27 ALMIAYAAC 1
ALMI+YAAC
Sbjct: 90 ALMISYAAC 98
>ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265613 [Vitis vinifera]
Length = 288
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -3
Query: 213 PVPHKGVV---LSSSARNSLPLSPPCAVAEALEQAAETSSAPGASSPSKVDKSGRFCSPR 43
P+P K ++ L SS R SL S A +E+ + S P P ++DKSGRFCSPR
Sbjct: 32 PLPTKLLINSKLLSSPRTSLRTS-----ALTVEKPLDKPSEPREMLP-RIDKSGRFCSPR 85
Query: 42 AARELALMIAYAAC 1
AARELAL+IAYAAC
Sbjct: 86 AARELALLIAYAAC 99
>emb|CAN61043.1| hypothetical protein VITISV_037528 [Vitis vinifera]
Length = 183
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -3
Query: 213 PVPHKGVV---LSSSARNSLPLSPPCAVAEALEQAAETSSAPGASSPSKVDKSGRFCSPR 43
P+P K ++ L SS R SL S A +E+ + S P P ++DKSGRFCSPR
Sbjct: 32 PLPTKLLINSKLLSSPRTSLRTS-----ALTVEKPLDKPSEPREMLP-RIDKSGRFCSPR 85
Query: 42 AARELALMIAYAAC 1
AARELAL+IAYAAC
Sbjct: 86 AARELALLIAYAAC 99
>ref|XP_006488956.1| PREDICTED: uncharacterized protein LOC102627108 [Citrus sinensis]
Length = 302
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 144 AVAEALEQAAETSSAPGASSPS-KVDKSGRFCSPRAARELALMIAYAAC 1
AV E LE+ E+ A A K+DKSGRFCSPRAARELAL++ YAAC
Sbjct: 63 AVQETLEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAAC 111
>ref|XP_006445559.1| hypothetical protein CICLE_v10015880mg [Citrus clementina]
gi|557548170|gb|ESR58799.1| hypothetical protein
CICLE_v10015880mg [Citrus clementina]
Length = 333
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 144 AVAEALEQAAETSSAPGASSPS-KVDKSGRFCSPRAARELALMIAYAAC 1
AV E LE+ E+ A A K+DKSGRFCSPRAARELAL++ YAAC
Sbjct: 94 AVQETLEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAAC 142
>dbj|BAJ88485.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = -3
Query: 213 PVPHKGVVLSSSARNSLPLSPPCAVAEALEQAAETSSAPG---ASSPSKVDKSGRFCSPR 43
P H+ +L+ A PL P VA + +S P A +KVD+SGRFCSPR
Sbjct: 21 PRTHRRGLLAGRA----PLPPARTVASSRAPLVVSSPPPTPAPAPGQAKVDRSGRFCSPR 76
Query: 42 AARELALMIAYAAC 1
AARELALM++YAAC
Sbjct: 77 AARELALMVSYAAC 90
>ref|XP_002466724.1| hypothetical protein SORBIDRAFT_01g012890 [Sorghum bicolor]
gi|241920578|gb|EER93722.1| hypothetical protein
SORBIDRAFT_01g012890 [Sorghum bicolor]
Length = 284
Score = 58.2 bits (139), Expect = 1e-06
Identities = 36/68 (52%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 186 SSSARNSLPLSPPCAVAEALEQAAETSSAP----GASSPSK--VDKSGRFCSPRAARELA 25
S AR PP AVA + TS P G +P+ VD+SGRFCSPRAARELA
Sbjct: 31 SRRARALAAPPPPRAVASSRAPLVVTSPPPPEASGTPAPAHAMVDRSGRFCSPRAARELA 90
Query: 24 LMIAYAAC 1
LMI+YAAC
Sbjct: 91 LMISYAAC 98
>ref|NP_001150841.1| LOC100284474 [Zea mays] gi|195642298|gb|ACG40617.1| RNA binding
protein [Zea mays]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Frame = -3
Query: 183 SSARNSLPLSPPCAVAEALEQAAETSSAP------GASSPS--KVDKSGRFCSPRAAREL 28
+S R +PP A A AA S+P G +P+ KVD+SGRFCSPRAAREL
Sbjct: 30 ASRRARALAAPPLPRAVASTCAALVVSSPPPPAASGTPAPAHAKVDRSGRFCSPRAAREL 89
Query: 27 ALMIAYAAC 1
ALMI+YAAC
Sbjct: 90 ALMISYAAC 98
>gb|EMJ06825.1| hypothetical protein PRUPE_ppa009156mg [Prunus persica]
Length = 304
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/69 (49%), Positives = 39/69 (56%)
Frame = -3
Query: 207 PHKGVVLSSSARNSLPLSPPCAVAEALEQAAETSSAPGASSPSKVDKSGRFCSPRAAREL 28
P V SS R SL S L++A E ++ K+DKSGRFCSPRAAREL
Sbjct: 51 PLLATVSLSSPRTSLRTS-----TFTLDEALEKPNSDSREMLPKIDKSGRFCSPRAAREL 105
Query: 27 ALMIAYAAC 1
AL I YAAC
Sbjct: 106 ALSIVYAAC 114