BLASTX nr result

ID: Zingiber25_contig00020623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020623
         (728 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY34502.1| Domain of Uncharacterized protein function isofor...    60   7e-07
emb|CBI17136.3| unnamed protein product [Vitis vinifera]               59   2e-06
ref|XP_002274821.1| PREDICTED: uncharacterized protein LOC100253...    59   2e-06

>gb|EOY34502.1| Domain of Uncharacterized protein function isoform 3 [Theobroma
           cacao]
          Length = 555

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
 Frame = +3

Query: 3   KIDCLSESQREISLGFKKKEHTRKRSIKTNKNKETTGEGAPNGNQSPSFDENRSCNMAYF 182
           ++DCLSE+ R + L  + KE+     I+T   KE  G+G     +S S++ + +C     
Sbjct: 382 ELDCLSENPRLMGLRLEDKEYFSGSLIETKMLKEE-GDGRTTLKRSSSYNADSACKQLDS 440

Query: 183 RGDEEKVVDSTQSNCLPRTQIIPSGKHSRNDII---------NTSTGPEICKXXXXXXXX 335
             D+E++ +  +S C+PR+      K  R++ +         N+S G +  +        
Sbjct: 441 AEDKEEL-NLGRSKCIPRSIKASLSKQPRSESMRSPVSVKPRNSSDGMDNSRLVSSSISN 499

Query: 336 XXXRRILDXXXXXXXXXXXXXXXXXXXXKMITIEERLTSGARVIIQSSSCCD 491
              RRI +                    K+I IEERL SGARVIIQS + CD
Sbjct: 500 GGSRRITEPIAGEKQSKRLDSFREEE--KVIKIEERLASGARVIIQSKAPCD 549


>emb|CBI17136.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 9/172 (5%)
 Frame = +3

Query: 3   KIDCLSESQREISLGFKKKEHTRKRSIKTNKNKETTGEGAPNGNQSPSFDENRSCNMAYF 182
           ++DC +E+ R + L  + KE+     I+T   KE  G+G     +S S++ +R+C     
Sbjct: 4   ELDCFAENPRMMGLKVEDKEYFSGSLIETKMLKE--GDGFTGLKRSSSYNADRTCKQLDS 61

Query: 183 RGDEEKVVDSTQSNCLPRTQIIPSGKHSRNDII---------NTSTGPEICKXXXXXXXX 335
             D+ + +   +S C+PR+      +H R++ +         N+S G +  +        
Sbjct: 62  AEDKGETMTG-RSKCIPRSIKASLSRHPRSESMRSPISDKPRNSSDGVDSSQTVSPSVSF 120

Query: 336 XXXRRILDXXXXXXXXXXXXXXXXXXXXKMITIEERLTSGARVIIQSSSCCD 491
              RRI +                     +I IEERLTSGARVIIQ+ + CD
Sbjct: 121 GSSRRITEPSLGKRQSKRLDSFREDED--VIQIEERLTSGARVIIQTKAACD 170


>ref|XP_002274821.1| PREDICTED: uncharacterized protein LOC100253409 [Vitis vinifera]
           gi|147767898|emb|CAN64540.1| hypothetical protein
           VITISV_009523 [Vitis vinifera]
          Length = 536

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 9/172 (5%)
 Frame = +3

Query: 3   KIDCLSESQREISLGFKKKEHTRKRSIKTNKNKETTGEGAPNGNQSPSFDENRSCNMAYF 182
           ++DC +E+ R + L  + KE+     I+T   KE  G+G     +S S++ +R+C     
Sbjct: 368 ELDCFAENPRMMGLKVEDKEYFSGSLIETKMLKE--GDGFTGLKRSSSYNADRTCKQLDS 425

Query: 183 RGDEEKVVDSTQSNCLPRTQIIPSGKHSRNDII---------NTSTGPEICKXXXXXXXX 335
             D+ + +   +S C+PR+      +H R++ +         N+S G +  +        
Sbjct: 426 AEDKGETMTG-RSKCIPRSIKASLSRHPRSESMRSPISDKPRNSSDGVDSSQTVSPSVSF 484

Query: 336 XXXRRILDXXXXXXXXXXXXXXXXXXXXKMITIEERLTSGARVIIQSSSCCD 491
              RRI +                     +I IEERLTSGARVIIQ+ + CD
Sbjct: 485 GSSRRITEPSLGKRQSKRLDSFREDED--VIQIEERLTSGARVIIQTKAACD 534


Top