BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020603
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Popu...    57   3e-06
ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group] g...    56   6e-06
gb|EEE67241.1| hypothetical protein OsJ_24387 [Oryza sativa Japo...    56   6e-06
gb|EEC82118.1| hypothetical protein OsI_26143 [Oryza sativa Indi...    56   6e-06
ref|XP_004957810.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    55   7e-06
ref|XP_004957809.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    55   7e-06
ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...    55   7e-06

>ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Populus trichocarpa]
           gi|550330040|gb|EEF02319.2| hypothetical protein
           POPTR_0010s17940g [Populus trichocarpa]
          Length = 1284

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/65 (52%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
 Frame = -2

Query: 176 DSSRKRSRYDHTSRTPARSDWDD-------TPRRSSQDTYXXXXXXXXXXXPMLAGASPD 18
           D  RKRSRY+ + RTP RSDWDD       TPR   QD+Y           PM  GASPD
Sbjct: 212 DYGRKRSRYEGSRRTPGRSDWDDGRWEWEETPR---QDSYNTSRRHHPSPSPMFVGASPD 268

Query: 17  ARLVS 3
           ARLVS
Sbjct: 269 ARLVS 273


>ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group]
           gi|33146483|dbj|BAC79592.1| putative DEAH-box RNA
           helicase [Oryza sativa Japonica Group]
           gi|113611278|dbj|BAF21656.1| Os07g0508000 [Oryza sativa
           Japonica Group]
          Length = 1280

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
 Frame = -2

Query: 176 DSSRKRSRYDHTSR---TPARSDWD-------DTPRRSSQDTYXXXXXXXXXXXPMLAGA 27
           D   KRSR++H+SR   TPARSDWD       DTPRR  +D             PMLA A
Sbjct: 208 DYMNKRSRHEHSSRSSRTPARSDWDSGRWEWEDTPRREYRDDRSNSHRQHPSPSPMLAAA 267

Query: 26  SPDARLVS 3
           SPDARLVS
Sbjct: 268 SPDARLVS 275


>gb|EEE67241.1| hypothetical protein OsJ_24387 [Oryza sativa Japonica Group]
          Length = 1370

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
 Frame = -2

Query: 176 DSSRKRSRYDHTSR---TPARSDWD-------DTPRRSSQDTYXXXXXXXXXXXPMLAGA 27
           D   KRSR++H+SR   TPARSDWD       DTPRR  +D             PMLA A
Sbjct: 215 DYMNKRSRHEHSSRSSRTPARSDWDSGRWEWEDTPRREYRDDRSNSHRQHPSPSPMLAAA 274

Query: 26  SPDARLVS 3
           SPDARLVS
Sbjct: 275 SPDARLVS 282


>gb|EEC82118.1| hypothetical protein OsI_26143 [Oryza sativa Indica Group]
          Length = 1287

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
 Frame = -2

Query: 176 DSSRKRSRYDHTSR---TPARSDWD-------DTPRRSSQDTYXXXXXXXXXXXPMLAGA 27
           D   KRSR++H+SR   TPARSDWD       DTPRR  +D             PMLA A
Sbjct: 215 DYMNKRSRHEHSSRSSRTPARSDWDSGRWEWEDTPRREYRDDRSNSHRQHPSPSPMLAAA 274

Query: 26  SPDARLVS 3
           SPDARLVS
Sbjct: 275 SPDARLVS 282


>ref|XP_004957810.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X2 [Setaria italica]
          Length = 1265

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
 Frame = -2

Query: 176 DSSRKRSRYDH---TSRTPARSDWDD-------TPRRSSQDTYXXXXXXXXXXXPMLAGA 27
           D + KRSR+ H   +SRTPARSDWDD       TPRR  +D             PMLA A
Sbjct: 194 DYANKRSRHGHGSRSSRTPARSDWDDGRWEWEDTPRRDYRDDRPGSRRQHPTRSPMLAAA 253

Query: 26  SPDARLVS 3
           SPDARLVS
Sbjct: 254 SPDARLVS 261


>ref|XP_004957809.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Setaria italica]
          Length = 1284

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
 Frame = -2

Query: 176 DSSRKRSRYDH---TSRTPARSDWDD-------TPRRSSQDTYXXXXXXXXXXXPMLAGA 27
           D + KRSR+ H   +SRTPARSDWDD       TPRR  +D             PMLA A
Sbjct: 213 DYANKRSRHGHGSRSSRTPARSDWDDGRWEWEDTPRRDYRDDRPGSRRQHPTRSPMLAAA 272

Query: 26  SPDARLVS 3
           SPDARLVS
Sbjct: 273 SPDARLVS 280


>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
           gi|241926289|gb|EER99433.1| hypothetical protein
           SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
 Frame = -2

Query: 170 SRKRSRYDHTSR---TPARSDWDD-------TPRRSSQDTYXXXXXXXXXXXPMLAGASP 21
           + KRSR++H+SR   TPARSDWDD       TPRR  +D             PMLA ASP
Sbjct: 201 TNKRSRHEHSSRSSRTPARSDWDDGRWEWEDTPRRDYRDNRPGSRRQHPTRSPMLAAASP 260

Query: 20  DARLVS 3
           DARLVS
Sbjct: 261 DARLVS 266