BLASTX nr result

ID: Zingiber25_contig00020435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020435
         (284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB82275.1| hypothetical protein L484_007265 [Morus notabilis]      74   2e-11
gb|EMJ23681.1| hypothetical protein PRUPE_ppa004079mg [Prunus pe...    72   1e-10
ref|XP_006450640.1| hypothetical protein CICLE_v10007989mg [Citr...    71   2e-10
ref|XP_002535481.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_006287441.1| hypothetical protein CARUB_v10000647mg, part...    70   3e-10
ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation...    70   4e-10
ref|XP_006290036.1| hypothetical protein CARUB_v10003670mg [Caps...    69   6e-10
ref|XP_006394822.1| hypothetical protein EUTSA_v10003996mg [Eutr...    69   8e-10
ref|XP_003565952.1| PREDICTED: eukaryotic translation initiation...    67   2e-09
ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation...    67   3e-09
ref|XP_002308615.2| hypothetical protein POPTR_0006s25800g [Popu...    66   4e-09
ref|XP_002324243.1| hypothetical protein POPTR_0018s00670g [Popu...    66   4e-09
ref|XP_006394821.1| hypothetical protein EUTSA_v10004012mg [Eutr...    65   7e-09
gb|EOY29686.1| RNA polymerase I-associated factor PAF67 isoform ...    65   7e-09
gb|EOY29685.1| RNA polymerase I-associated factor PAF67 isoform ...    65   7e-09
gb|EOY29684.1| RNA polymerase I-associated factor PAF67 isoform ...    65   7e-09
gb|EOY29683.1| RNA polymerase I-associated factor PAF67 isoform ...    65   7e-09
gb|EOY29682.1| RNA polymerase I-associated factor PAF67 isoform ...    65   7e-09
ref|XP_004291198.1| PREDICTED: eukaryotic translation initiation...    65   7e-09
gb|ESW09179.1| hypothetical protein PHAVU_009G106900g [Phaseolus...    64   2e-08

>gb|EXB82275.1| hypothetical protein L484_007265 [Morus notabilis]
          Length = 551

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/65 (61%), Positives = 46/65 (70%), Gaps = 7/65 (10%)
 Frame = -2

Query: 175 SYDYDDA-------SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIRE 17
           SYDYDD+       S   R ++ PSSGQ      +L YDPN+VPDSVK+FVVHLYRHIRE
Sbjct: 3   SYDYDDSRAGYEESSATQRGSQTPSSGQ------DLGYDPNYVPDSVKSFVVHLYRHIRE 56

Query: 16  KNVYE 2
           KNVYE
Sbjct: 57  KNVYE 61


>gb|EMJ23681.1| hypothetical protein PRUPE_ppa004079mg [Prunus persica]
          Length = 531

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
 Frame = -2

Query: 175 SYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVYE 2
           +YDY+DA  ++D   A    +        +L YDPNFVPDSVK+FVVHLYRHIREKNVYE
Sbjct: 3   AYDYEDAPGTYDETSATQRQASSGAPPSQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYE 62


>ref|XP_006450640.1| hypothetical protein CICLE_v10007989mg [Citrus clementina]
           gi|568844412|ref|XP_006476083.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit L-like [Citrus
           sinensis] gi|557553866|gb|ESR63880.1| hypothetical
           protein CICLE_v10007989mg [Citrus clementina]
          Length = 526

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 40/60 (66%)
 Frame = -2

Query: 181 ANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVYE 2
           A SYDY+DA  D        S        +L YDPNFVPDSVK+FVVHLYRHIREKNVYE
Sbjct: 3   AASYDYEDAPADY-----DGSADARASSQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYE 57


>ref|XP_002535481.1| conserved hypothetical protein [Ricinus communis]
           gi|223522964|gb|EEF26902.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/61 (59%), Positives = 42/61 (68%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           M+ +YDYDD +  +   R     Q      EL YDPN+VPDSVK+FVVHLYRHIREKNVY
Sbjct: 1   MSATYDYDDTTGGA--GRSNYDEQSGFQRQELGYDPNYVPDSVKSFVVHLYRHIREKNVY 58

Query: 4   E 2
           E
Sbjct: 59  E 59


>ref|XP_006287441.1| hypothetical protein CARUB_v10000647mg, partial [Capsella rubella]
           gi|482556147|gb|EOA20339.1| hypothetical protein
           CARUB_v10000647mg, partial [Capsella rubella]
          Length = 544

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/61 (59%), Positives = 41/61 (67%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA SY+YDDA         P++        E  YDPNFVPDSVK+FVVH+YRHIREKNVY
Sbjct: 24  MAASYEYDDA---------PAANYEGESGGEGGYDPNFVPDSVKSFVVHMYRHIREKNVY 74

Query: 4   E 2
           E
Sbjct: 75  E 75


>ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Cucumis sativus]
           gi|449508023|ref|XP_004163195.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit L-like [Cucumis
           sativus]
          Length = 528

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/58 (58%), Positives = 41/58 (70%)
 Frame = -2

Query: 175 SYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVYE 2
           +YDYDD+   + Y  P  +        ++ YDPNFVPDSVK+FVVHLYRHIREKNVYE
Sbjct: 3   TYDYDDSR--ANYDDPRHAPVSAPAGQDIGYDPNFVPDSVKSFVVHLYRHIREKNVYE 58


>ref|XP_006290036.1| hypothetical protein CARUB_v10003670mg [Capsella rubella]
           gi|482558742|gb|EOA22934.1| hypothetical protein
           CARUB_v10003670mg [Capsella rubella]
          Length = 523

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA +Y+YDDA         P++        E  YDPNFVPDSVK+FVVH+YRHIREKNVY
Sbjct: 1   MAANYEYDDA---------PAANYEGESGGEGGYDPNFVPDSVKSFVVHMYRHIREKNVY 51

Query: 4   E 2
           E
Sbjct: 52  E 52


>ref|XP_006394822.1| hypothetical protein EUTSA_v10003996mg [Eutrema salsugineum]
           gi|557091461|gb|ESQ32108.1| hypothetical protein
           EUTSA_v10003996mg [Eutrema salsugineum]
          Length = 523

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 MANSYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKN 11
           MA++YD++DA  ++D    +   SGQ      +  YDPNFVPDSVK+FVVH+YRHIREKN
Sbjct: 1   MASNYDFEDAPANYDDSQRQ---SGQ------DTAYDPNFVPDSVKSFVVHMYRHIREKN 51

Query: 10  VYE 2
           VYE
Sbjct: 52  VYE 54


>ref|XP_003565952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Brachypodium distachyon]
          Length = 521

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA++YD +D +       PPS G          YDPN+VPDSVKTFVVHLYRHIR+KNVY
Sbjct: 1   MASAYDREDGT------APPSHGGGAADA----YDPNYVPDSVKTFVVHLYRHIRDKNVY 50

Query: 4   E 2
           E
Sbjct: 51  E 51


>ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Vitis vinifera]
          Length = 517

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA+SYD++D    S+                L YDPN+VPDSV+TFVVHLYRHIREKNVY
Sbjct: 1   MASSYDHEDVQSQSQV-------------DPLGYDPNYVPDSVRTFVVHLYRHIREKNVY 47

Query: 4   E 2
           E
Sbjct: 48  E 48


>ref|XP_002308615.2| hypothetical protein POPTR_0006s25800g [Populus trichocarpa]
           gi|550337092|gb|EEE92138.2| hypothetical protein
           POPTR_0006s25800g [Populus trichocarpa]
          Length = 519

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/61 (57%), Positives = 37/61 (60%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA SYDY+DA         P             YDPNFVPDSVK+FV HLYRHIREKNVY
Sbjct: 1   MAASYDYEDAPSRHDEETGPQG-----------YDPNFVPDSVKSFVTHLYRHIREKNVY 49

Query: 4   E 2
           E
Sbjct: 50  E 50


>ref|XP_002324243.1| hypothetical protein POPTR_0018s00670g [Populus trichocarpa]
           gi|222865677|gb|EEF02808.1| hypothetical protein
           POPTR_0018s00670g [Populus trichocarpa]
          Length = 519

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA +YDYDDA         P             YDPNFVPDSVK+FV HLYRHIREKNVY
Sbjct: 1   MATTYDYDDAPTRHDEQTGPDG-----------YDPNFVPDSVKSFVTHLYRHIREKNVY 49

Query: 4   E 2
           +
Sbjct: 50  D 50


>ref|XP_006394821.1| hypothetical protein EUTSA_v10004012mg [Eutrema salsugineum]
           gi|557091460|gb|ESQ32107.1| hypothetical protein
           EUTSA_v10004012mg [Eutrema salsugineum]
          Length = 516

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = -2

Query: 184 MANSYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVY 5
           MA++Y++DDA       R  S         +  YDPNFVPDSVK+FVVH+YRHIREKNVY
Sbjct: 1   MASNYEFDDAQ------RQDSQ--------DTAYDPNFVPDSVKSFVVHMYRHIREKNVY 46

Query: 4   E 2
           E
Sbjct: 47  E 47


>gb|EOY29686.1| RNA polymerase I-associated factor PAF67 isoform 5 [Theobroma
           cacao]
          Length = 409

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 MANSYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKN 11
           MA +YDY++A  ++D  + +            +L YDPNFVPDSVK+FV HLYRHIREKN
Sbjct: 1   MATNYDYEEAPANYDETHRQ------------DLGYDPNFVPDSVKSFVGHLYRHIREKN 48

Query: 10  VYE 2
           VYE
Sbjct: 49  VYE 51


>gb|EOY29685.1| RNA polymerase I-associated factor PAF67 isoform 4 [Theobroma
           cacao]
          Length = 463

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 MANSYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKN 11
           MA +YDY++A  ++D  + +            +L YDPNFVPDSVK+FV HLYRHIREKN
Sbjct: 1   MATNYDYEEAPANYDETHRQ------------DLGYDPNFVPDSVKSFVGHLYRHIREKN 48

Query: 10  VYE 2
           VYE
Sbjct: 49  VYE 51


>gb|EOY29684.1| RNA polymerase I-associated factor PAF67 isoform 3 [Theobroma
           cacao]
          Length = 519

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 MANSYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKN 11
           MA +YDY++A  ++D  + +            +L YDPNFVPDSVK+FV HLYRHIREKN
Sbjct: 1   MATNYDYEEAPANYDETHRQ------------DLGYDPNFVPDSVKSFVGHLYRHIREKN 48

Query: 10  VYE 2
           VYE
Sbjct: 49  VYE 51


>gb|EOY29683.1| RNA polymerase I-associated factor PAF67 isoform 2, partial
           [Theobroma cacao]
          Length = 497

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 MANSYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKN 11
           MA +YDY++A  ++D  + +            +L YDPNFVPDSVK+FV HLYRHIREKN
Sbjct: 1   MATNYDYEEAPANYDETHRQ------------DLGYDPNFVPDSVKSFVGHLYRHIREKN 48

Query: 10  VYE 2
           VYE
Sbjct: 49  VYE 51


>gb|EOY29682.1| RNA polymerase I-associated factor PAF67 isoform 1 [Theobroma
           cacao]
          Length = 520

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 MANSYDYDDA--SFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKN 11
           MA +YDY++A  ++D  + +            +L YDPNFVPDSVK+FV HLYRHIREKN
Sbjct: 1   MATNYDYEEAPANYDETHRQ------------DLGYDPNFVPDSVKSFVGHLYRHIREKN 48

Query: 10  VYE 2
           VYE
Sbjct: 49  VYE 51


>ref|XP_004291198.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Fragaria vesca subsp. vesca]
          Length = 523

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/58 (58%), Positives = 39/58 (67%)
 Frame = -2

Query: 175 SYDYDDASFDSRYARPPSSGQXXXXXAELIYDPNFVPDSVKTFVVHLYRHIREKNVYE 2
           +YD+D+ S   R A   +  Q      E  YDPN VPDSVK+FVVHLYRHIREKNVYE
Sbjct: 3   AYDFDEPSATHRQASSDAPSQ------EPGYDPNHVPDSVKSFVVHLYRHIREKNVYE 54


>gb|ESW09179.1| hypothetical protein PHAVU_009G106900g [Phaseolus vulgaris]
          Length = 513

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 94  ELIYDPNFVPDSVKTFVVHLYRHIREKNVYE 2
           EL YDPNFVPDSVK+FVVHLYRHIREKNVYE
Sbjct: 14  ELGYDPNFVPDSVKSFVVHLYRHIREKNVYE 44


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