BLASTX nr result
ID: Zingiber25_contig00020385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00020385
(1244 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 569 e-160
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 569 e-160
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s... 556 e-156
gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus pe... 550 e-154
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr... 550 e-154
gb|EOY22974.1| Cleavage and polyadenylation specificity factor 1... 550 e-154
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec... 548 e-153
ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arab... 543 e-152
ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [A... 540 e-151
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ... 535 e-149
ref|NP_199979.2| cleavage and polyadenylation specificity factor... 535 e-149
gb|AAN41460.1| putative cleavage and polyadenylation specificity... 535 e-149
ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation spec... 533 e-149
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 533 e-149
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 533 e-149
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 533 e-149
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 533 e-149
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 533 e-149
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 532 e-148
gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus... 531 e-148
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 569 bits (1466), Expect = e-160
Identities = 271/378 (71%), Positives = 329/378 (87%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MSYAA+KMMH TGIE+CASGFVTHS ++ P +I PI +DDL+S EWP +R++GP+PNL
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHSRADFAP-QIAPIQTDDLES-EWPTKRQIGPLPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESMT 470
+VTAAN+LEVY+VRVQEDD++ RAS + + GG M G+SGA LELVC YRLHGNVE+MT
Sbjct: 59 IVTAANILEVYMVRVQEDDSRESRASAETK-RGGVMAGISGAALELVCQYRLHGNVETMT 117
Query: 471 ILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRESF 650
+L G +++ RRDSI+LAFQDAKI+VLE+DDS HGLRTSSMHCFEGP+W +LKRG ESF
Sbjct: 118 VLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESF 177
Query: 651 AKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVIN 830
A+GP+++ DP GRCSGVL+YGLQMIILKA+Q G GLVGD+E +SG AVS R+ESSYVI+
Sbjct: 178 ARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVIS 237
Query: 831 LRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHPM 1010
LRDLDMKHVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQHP+
Sbjct: 238 LRDLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPL 297
Query: 1011 IWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMPK 1190
IWSA N+PHDAYKLL VPSPIGGV+VI AN+IHY+SQS SC+L LN++ + ++S EMP+
Sbjct: 298 IWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPR 357
Query: 1191 SKFAVELDAANGTWLSPD 1244
S F+VELDAAN TWLS D
Sbjct: 358 SSFSVELDAANATWLSND 375
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 569 bits (1466), Expect = e-160
Identities = 271/378 (71%), Positives = 329/378 (87%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MSYAA+KMMH TGIE+CASGFVTHS ++ P +I PI +DDL+S EWP +R++GP+PNL
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHSRADFAP-QIAPIQTDDLES-EWPTKRQIGPLPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESMT 470
+VTAAN+LEVY+VRVQEDD++ RAS + + GG M G+SGA LELVC YRLHGNVE+MT
Sbjct: 59 IVTAANILEVYMVRVQEDDSRESRASAETK-RGGVMAGISGAALELVCQYRLHGNVETMT 117
Query: 471 ILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRESF 650
+L G +++ RRDSI+LAFQDAKI+VLE+DDS HGLRTSSMHCFEGP+W +LKRG ESF
Sbjct: 118 VLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESF 177
Query: 651 AKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVIN 830
A+GP+++ DP GRCSGVL+YGLQMIILKA+Q G GLVGD+E +SG AVS R+ESSYVI+
Sbjct: 178 ARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVIS 237
Query: 831 LRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHPM 1010
LRDLDMKHVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQHP+
Sbjct: 238 LRDLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPL 297
Query: 1011 IWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMPK 1190
IWSA N+PHDAYKLL VPSPIGGV+VI AN+IHY+SQS SC+L LN++ + ++S EMP+
Sbjct: 298 IWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPR 357
Query: 1191 SKFAVELDAANGTWLSPD 1244
S F+VELDAAN TWLS D
Sbjct: 358 SSFSVELDAANATWLSND 375
>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 556 bits (1434), Expect = e-156
Identities = 270/380 (71%), Positives = 323/380 (85%), Gaps = 2/380 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWP-GERRVGPVPN 287
MS+AA+KMMH TGIE+CA+GFV+HS ++ P IPPI SDDLDS +WP G R GPVPN
Sbjct: 1 MSFAAYKMMHWPTGIENCAAGFVSHSRADFVP-RIPPIQSDDLDS-DWPAGRRETGPVPN 58
Query: 288 LVVTAANVLEVYLVRVQE-DDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVES 464
LVVTA NVLEVY+VR+QE DD ++ RA + R GG MDG+SGA LELVCHYRLHGNV++
Sbjct: 59 LVVTAGNVLEVYVVRLQEEDDTRSSRAPAESR-RGGLMDGLSGASLELVCHYRLHGNVQT 117
Query: 465 MTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRE 644
+ +LS G + + RRDSI+L+FQDAKI+VLE+DDS HGLRTSSMHCFEGP+W YLKRGRE
Sbjct: 118 IAVLSSGGGDGSRRRDSIILSFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWLYLKRGRE 177
Query: 645 SFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYV 824
SFA+GP+++ DP GRC+GVL Y +QMI+LKAAQ G GLVG+++ SGGAVS RIESSY+
Sbjct: 178 SFARGPLVKVDPQGRCAGVLAYNIQMIMLKAAQAGSGLVGEEDALGSGGAVSARIESSYI 237
Query: 825 INLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQH 1004
INLRDLDMKH+KDF FVHGYIEPV+V+LHE+E TWAGR+ WKHHTCMISALSI+T+LKQH
Sbjct: 238 INLRDLDMKHIKDFVFVHGYIEPVMVILHERELTWAGRVLWKHHTCMISALSISTTLKQH 297
Query: 1005 PMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEM 1184
P+IWSA N+PHDAYKLLAVPSPIGGVLVICANT+HY SQS SC+L LNS+ + +SS EM
Sbjct: 298 PLIWSAVNLPHDAYKLLAVPSPIGGVLVICANTLHYQSQSNSCTLALNSYAVSVDSSQEM 357
Query: 1185 PKSKFAVELDAANGTWLSPD 1244
++ F+VELDAAN TWLS D
Sbjct: 358 RRAPFSVELDAANATWLSND 377
>gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 550 bits (1417), Expect = e-154
Identities = 262/379 (69%), Positives = 318/379 (83%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MS+AA+KMMH TGIE+CASGF++HS S+ P IPPI ++DL+S EWP RR +GP+P+
Sbjct: 1 MSFAAYKMMHWPTGIENCASGFISHSRSDFVP-RIPPIQTEDLES-EWPTSRREIGPIPD 58
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
LVVTA NVLEVY+VRVQE+D + + GG MDGVSGA LELVCHYRLHGNV +M
Sbjct: 59 LVVTAGNVLEVYVVRVQEEDGTRGPRASGEPKRGGLMDGVSGASLELVCHYRLHGNVVTM 118
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+LS G + + RRDSI+L F+DAKI+VLE+DDS HGLRTSSMHCFEGP+W +L+RGRES
Sbjct: 119 AVLSSGGGDGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRES 178
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
FA+GP+++ DP GRC +L+YGLQMIILKA+Q G GLVGDD+ SGGA+S RIESSY++
Sbjct: 179 FARGPLVKVDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISSRIESSYIV 238
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
NLRD+DMKHVKDFTF+HGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQHP
Sbjct: 239 NLRDMDMKHVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHP 298
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLVI AN+IHY+SQS SC+L LNS+ + ++S EMP
Sbjct: 299 LIWSAVNLPHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSADNSQEMP 358
Query: 1188 KSKFAVELDAANGTWLSPD 1244
+S F VELD AN TWL D
Sbjct: 359 RSSFTVELDTANATWLLND 377
>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
gi|557103022|gb|ESQ43385.1| hypothetical protein
EUTSA_v10012441mg [Eutrema salsugineum]
Length = 1445
Score = 550 bits (1416), Expect = e-154
Identities = 260/384 (67%), Positives = 321/384 (83%), Gaps = 6/384 (1%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MS+AAFKMMH TG+E+CASG++THS S++T +IP ++ DDL++ EWP +R +G VPN
Sbjct: 1 MSFAAFKMMHWPTGVENCASGYITHSISDTTTQQIPIVSGDDLEA-EWPAPKRGIGAVPN 59
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGS-----GGTMDGVSGARLELVCHYRLHG 452
+V+TA N+LEVY+VRVQE+ N S++ R GG M+GVSG LELVCHYRLHG
Sbjct: 60 VVITAGNILEVYVVRVQEEVN----TSQEPRNPKLVRRGGVMEGVSGVSLELVCHYRLHG 115
Query: 453 NVESMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLK 632
NVES+ +L +G N + RDSI+L F+DAKI+VLE+DDS HGLR +SMHCFEGPDW +LK
Sbjct: 116 NVESLAVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDDSIHGLRMNSMHCFEGPDWLHLK 175
Query: 633 RGRESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIE 812
RGRESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGDD+P +SGG VS R+E
Sbjct: 176 RGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQAGFGLVGDDDPFSSGGTVSARVE 235
Query: 813 SSYVINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTS 992
SSY+INLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTCM+SALSINT+
Sbjct: 236 SSYIINLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCMLSALSINTT 295
Query: 993 LKQHPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPES 1172
LKQHP+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LNS+ +S
Sbjct: 296 LKQHPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSSSCALALNSYASSADS 355
Query: 1173 SSEMPKSKFAVELDAANGTWLSPD 1244
S E+P S F+VELDAA+GTW+S D
Sbjct: 356 SQELPASNFSVELDAAHGTWISND 379
>gb|EOY22974.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 550 bits (1416), Expect = e-154
Identities = 260/378 (68%), Positives = 321/378 (84%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MSYAA+KMMH TGIE+CASGFVTH ++ TP +IP ++DL+S EWP R +GPVPNL
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHCRADFTP-QIPLNQTEDLES-EWPARRGIGPVPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESMT 470
+VTAAN+LE+Y+VRVQE+ + R S + + GG +DGVSG LELVC+YRLHGNVESM
Sbjct: 59 IVTAANLLEIYVVRVQEEGRREARNSTEVK-RGGVLDGVSGVSLELVCNYRLHGNVESMA 117
Query: 471 ILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRESF 650
+LS+G + + RRDSI+LAF+DAKI+VLE+DDS HGLRT+SMHCFEGP+W +LKRGRESF
Sbjct: 118 VLSIGGGDGSRRRDSIILAFKDAKISVLEFDDSIHGLRTTSMHCFEGPEWLHLKRGRESF 177
Query: 651 AKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVIN 830
A+GP+++ DP GRC GVL+Y LQMIILKA+Q G G VG+D+ SGGAVS R+ESSY+IN
Sbjct: 178 ARGPLVKVDPQGRCGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIIN 237
Query: 831 LRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHPM 1010
LRDLD+KH+KDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQHP+
Sbjct: 238 LRDLDVKHIKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPL 297
Query: 1011 IWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMPK 1190
IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LN++ + ++S ++P+
Sbjct: 298 IWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNNYAISVDNSQDLPR 357
Query: 1191 SKFAVELDAANGTWLSPD 1244
S F+VELDAAN TWL D
Sbjct: 358 SNFSVELDAANATWLLND 375
>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Fragaria vesca subsp. vesca]
Length = 1439
Score = 548 bits (1413), Expect = e-153
Identities = 266/379 (70%), Positives = 315/379 (83%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MSYAA KMMH TGIE+CA+GF+THS ++ P IP I +DDLDS +WP RR +GPVPN
Sbjct: 1 MSYAAHKMMHWPTGIENCAAGFITHSRADFVP-RIPQIQTDDLDS-DWPAPRREIGPVPN 58
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
LVVTAANVLEVY+VRVQE D + + GG MDGV+GA LELVCHYRLHGNV +M
Sbjct: 59 LVVTAANVLEVYVVRVQEQDTARGSRASGESKRGGLMDGVAGASLELVCHYRLHGNVMTM 118
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+LS G + + RRD+I+L F+DAKI+VLE+DDS HGLRTSSMHCFEGP+W +L+RGRES
Sbjct: 119 AVLSSGGGDGSKRRDAIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRES 178
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
FA+GP ++ DP GRC GVL+Y LQ+IILKAAQ G GLVGDD+ SG A+S R+ESSY+I
Sbjct: 179 FARGPSVKVDPQGRCGGVLVYDLQLIILKAAQGGYGLVGDDDGFASGAAISARVESSYII 238
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
+LRD+DMKHVKDFTFVHGYIEPVLV+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQHP
Sbjct: 239 SLRDMDMKHVKDFTFVHGYIEPVLVILHERELTWAGRVSWKHHTCMISALSISTTLKQHP 298
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLVI AN+IHY+SQS SC+L LNS+ +SS EMP
Sbjct: 299 LIWSAINLPHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAGSVDSSQEMP 358
Query: 1188 KSKFAVELDAANGTWLSPD 1244
+S F VELDAAN +WLS D
Sbjct: 359 RSSFTVELDAANASWLSND 377
>ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata] gi|297309955|gb|EFH40379.1| hypothetical protein
ARALYDRAFT_495232 [Arabidopsis lyrata subsp. lyrata]
Length = 1444
Score = 543 bits (1398), Expect = e-152
Identities = 254/379 (67%), Positives = 313/379 (82%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MS+AAFKMMH TG+E+CASG++THS S+ST +IP ++ DD +EWP +R +GP+PN
Sbjct: 1 MSFAAFKMMHWPTGVENCASGYITHSLSDST-LQIPIVSGDDDMEAEWPNHKRGIGPLPN 59
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
+V+TA N+LEVY+VR QE+ N GG MDGVSG LELVCHYRLHGNVES+
Sbjct: 60 VVITAGNILEVYIVRAQEEGNTQELRIPKLVKRGGVMDGVSGVSLELVCHYRLHGNVESI 119
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+L +G N + RDSI+L F+DAKI+VLE+DDS H LR +SMHCFEGPDW +LKRGRES
Sbjct: 120 AVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRES 179
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
F +GP+++ DP GRC GVL+YGLQMIILKA+QVG GLVGDD+ +SGG VS R+ESSY+I
Sbjct: 180 FPRGPLVKVDPQGRCGGVLVYGLQMIILKASQVGSGLVGDDDAFSSGGTVSARVESSYII 239
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
NLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTC++SALSINT+LKQHP
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINTTLKQHP 299
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LN++ +SS E+P
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359
Query: 1188 KSKFAVELDAANGTWLSPD 1244
S F+VELDAA+GTW+S D
Sbjct: 360 ASNFSVELDAAHGTWISSD 378
>ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [Amborella trichopoda]
gi|548855397|gb|ERN13281.1| hypothetical protein
AMTR_s00041p00037520 [Amborella trichopoda]
Length = 1459
Score = 540 bits (1390), Expect = e-151
Identities = 262/383 (68%), Positives = 318/383 (83%), Gaps = 5/383 (1%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEW---PGERRVGPV 281
MS++AFK+MH AT +E+CASG++THS S+ A +P I +DD DS EW P + R+GP+
Sbjct: 1 MSFSAFKLMHWATAVENCASGYITHSFSDFA-ASVPAIQNDDPDS-EWDQPPVKARIGPI 58
Query: 282 PNLVVTAANVLEVYLVRVQEDDNKTLRASEDQRGS--GGTMDGVSGARLELVCHYRLHGN 455
PNLV++AANVLEVY++RVQE+D+K R S GS GG + GVSGA LELVCHYRLHGN
Sbjct: 59 PNLVISAANVLEVYVIRVQEEDSKASRHSGASSGSKGGGVVAGVSGAWLELVCHYRLHGN 118
Query: 456 VESMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKR 635
VE+M ILS G+D+ +RDSI+L F++AKI+VLEYDDS HGLRTSSMHCFEGP+WQYLKR
Sbjct: 119 VETMAILSAGSDDGRRKRDSIILTFKEAKISVLEYDDSLHGLRTSSMHCFEGPEWQYLKR 178
Query: 636 GRESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIES 815
GRE+FA+GP++ DP GRC GVLI QM+ILKA++ G G VGDD+ G VS+RIES
Sbjct: 179 GRENFARGPLVYVDPQGRCGGVLICDSQMLILKASKAGYGFVGDDDANGPTGTVSIRIES 238
Query: 816 SYVINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSL 995
SYVI+LR+LDMKHVKDF FVHGYIEPV+V+LHEKE TWAGR+SWKHHTCMISA SI+T+L
Sbjct: 239 SYVISLRELDMKHVKDFVFVHGYIEPVMVILHEKELTWAGRLSWKHHTCMISAFSISTTL 298
Query: 996 KQHPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESS 1175
KQHP+IWSASN+PHDAYKLL+VPSPIGGVLVICAN+IHY+SQS+SC+L LN F + E+S
Sbjct: 299 KQHPLIWSASNLPHDAYKLLSVPSPIGGVLVICANSIHYHSQSMSCALALNDFAVAGENS 358
Query: 1176 SEMPKSKFAVELDAANGTWLSPD 1244
EMP+S VELDAA+ TWLS D
Sbjct: 359 QEMPRSNVNVELDAAHATWLSND 381
>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit [Arabidopsis
thaliana]
Length = 1448
Score = 535 bits (1379), Expect = e-149
Identities = 250/379 (65%), Positives = 312/379 (82%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MS+AA+KMMH TG+E+CASG++THS S+ST +IP ++ D +EWP +R +GP+PN
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDST-LQIPIVSVHDDIEAEWPNPKRGIGPLPN 59
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
+V+TAAN+LEVY+VR QE+ N + GG MDGV G LELVCHYRLHGNVES+
Sbjct: 60 VVITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESI 119
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+L +G N + RDSI+L F+DAKI+VLE+DDS H LR +SMHCFEGPDW +LKRGRES
Sbjct: 120 AVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRES 179
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
F +GP+++ DP GRC GVL+YGLQMIILK +QVG GLVGDD+ +SGG VS R+ESSY+I
Sbjct: 180 FPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYII 239
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
NLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTC++SALSIN++LKQHP
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHP 299
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LN++ +SS E+P
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359
Query: 1188 KSKFAVELDAANGTWLSPD 1244
S F+VELDAA+GTW+S D
Sbjct: 360 ASNFSVELDAAHGTWISND 378
>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=AtCPSF160;
Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
Length = 1442
Score = 535 bits (1379), Expect = e-149
Identities = 250/379 (65%), Positives = 312/379 (82%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MS+AA+KMMH TG+E+CASG++THS S+ST +IP ++ D +EWP +R +GP+PN
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDST-LQIPIVSVHDDIEAEWPNPKRGIGPLPN 59
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
+V+TAAN+LEVY+VR QE+ N + GG MDGV G LELVCHYRLHGNVES+
Sbjct: 60 VVITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESI 119
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+L +G N + RDSI+L F+DAKI+VLE+DDS H LR +SMHCFEGPDW +LKRGRES
Sbjct: 120 AVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRES 179
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
F +GP+++ DP GRC GVL+YGLQMIILK +QVG GLVGDD+ +SGG VS R+ESSY+I
Sbjct: 180 FPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYII 239
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
NLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTC++SALSIN++LKQHP
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHP 299
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LN++ +SS E+P
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359
Query: 1188 KSKFAVELDAANGTWLSPD 1244
S F+VELDAA+GTW+S D
Sbjct: 360 ASNFSVELDAAHGTWISND 378
>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
subunit [Arabidopsis thaliana]
Length = 1442
Score = 535 bits (1379), Expect = e-149
Identities = 250/379 (65%), Positives = 312/379 (82%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR-VGPVPN 287
MS+AA+KMMH TG+E+CASG++THS S+ST +IP ++ D +EWP +R +GP+PN
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDST-LQIPIVSVHDDIEAEWPNPKRGIGPLPN 59
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
+V+TAAN+LEVY+VR QE+ N + GG MDGV G LELVCHYRLHGNVES+
Sbjct: 60 VVITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESI 119
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+L +G N + RDSI+L F+DAKI+VLE+DDS H LR +SMHCFEGPDW +LKRGRES
Sbjct: 120 AVLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRES 179
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
F +GP+++ DP GRC GVL+YGLQMIILK +QVG GLVGDD+ +SGG VS R+ESSY+I
Sbjct: 180 FPRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYII 239
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
NLRDL+MKHVKDF F+HGYIEPV+V+L E+E TWAGR+SWKHHTC++SALSIN++LKQHP
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHP 299
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLV+CANTIHY+SQS SC+L LN++ +SS E+P
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359
Query: 1188 KSKFAVELDAANGTWLSPD 1244
S F+VELDAA+GTW+S D
Sbjct: 360 ASNFSVELDAAHGTWISND 378
>ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cicer arietinum]
Length = 1447
Score = 533 bits (1374), Expect = e-149
Identities = 261/381 (68%), Positives = 314/381 (82%), Gaps = 3/381 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPI---NSDDLDSSEWPGERRVGPV 281
MS+AA+KMM TGI++CASGF+THS S+STP IPPI + DD+DS P R + P+
Sbjct: 1 MSFAAYKMMQWPTGIQNCASGFLTHSRSDSTP-RIPPIQHNDDDDIDSDWVPQPRDLAPL 59
Query: 282 PNLVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVE 461
PNLV+TAAN+LEVY VR+Q+D K+ S D R +DG++GA LELVCHYRLHGNVE
Sbjct: 60 PNLVITAANILEVYTVRIQQDPPKS---SADPR----VLDGLAGASLELVCHYRLHGNVE 112
Query: 462 SMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGR 641
S+ +LS+G + + RRDSI+L F+DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGR
Sbjct: 113 SVAVLSVGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGR 172
Query: 642 ESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSY 821
E FA+GPV + DP GRC GVL+Y LQMIILK Q G GLVG+D+ SGGAV+ RIESSY
Sbjct: 173 EHFARGPVAKVDPQGRCGGVLVYDLQMIILKTTQAGSGLVGEDDVLGSGGAVAARIESSY 232
Query: 822 VINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQ 1001
+INLRDLDM+HVKDFTF+HGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQ
Sbjct: 233 MINLRDLDMRHVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 292
Query: 1002 HPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSE 1181
HP+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LNS+ + ++S E
Sbjct: 293 HPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVSVDNSQE 352
Query: 1182 MPKSKFAVELDAANGTWLSPD 1244
MP+S F VELDAAN TWL D
Sbjct: 353 MPRSSFNVELDAANATWLLND 373
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 533 bits (1373), Expect = e-149
Identities = 259/383 (67%), Positives = 318/383 (83%), Gaps = 5/383 (1%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MS+AA+KMMH TGI +C SGF+THS ++ P +IP I +++LDS E P +R +GPVPNL
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVP-QIPLIQTEELDS-ELPSKRGIGPVPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGT-----MDGVSGARLELVCHYRLHGN 455
VVTAANV+E+Y+VRVQE+ +K + + SG T MDG+S A LELVCHYRLHGN
Sbjct: 59 VVTAANVIEIYVVRVQEEGSK------ESKNSGETKRRVLMDGISAASLELVCHYRLHGN 112
Query: 456 VESMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKR 635
VES+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKR
Sbjct: 113 VESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKR 172
Query: 636 GRESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIES 815
GRESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIES
Sbjct: 173 GRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIES 232
Query: 816 SYVINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSL 995
S+VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+L
Sbjct: 233 SHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTL 292
Query: 996 KQHPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESS 1175
KQHP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS
Sbjct: 293 KQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSS 352
Query: 1176 SEMPKSKFAVELDAANGTWLSPD 1244
E+P+S F+VELDAA+ TWL D
Sbjct: 353 QELPRSSFSVELDAAHATWLQND 375
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 533 bits (1373), Expect = e-149
Identities = 259/383 (67%), Positives = 318/383 (83%), Gaps = 5/383 (1%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MS+AA+KMMH TGI +C SGF+THS ++ P +IP I +++LDS E P +R +GPVPNL
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVP-QIPLIQTEELDS-ELPSKRGIGPVPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGT-----MDGVSGARLELVCHYRLHGN 455
VVTAANV+E+Y+VRVQE+ +K + + SG T MDG+S A LELVCHYRLHGN
Sbjct: 59 VVTAANVIEIYVVRVQEEGSK------ESKNSGETKRRVLMDGISAASLELVCHYRLHGN 112
Query: 456 VESMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKR 635
VES+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKR
Sbjct: 113 VESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKR 172
Query: 636 GRESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIES 815
GRESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIES
Sbjct: 173 GRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIES 232
Query: 816 SYVINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSL 995
S+VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+L
Sbjct: 233 SHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTL 292
Query: 996 KQHPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESS 1175
KQHP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS
Sbjct: 293 KQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSS 352
Query: 1176 SEMPKSKFAVELDAANGTWLSPD 1244
E+P+S F+VELDAA+ TWL D
Sbjct: 353 QELPRSSFSVELDAAHATWLQND 375
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 533 bits (1373), Expect = e-149
Identities = 259/383 (67%), Positives = 318/383 (83%), Gaps = 5/383 (1%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MS+AA+KMMH TGI +C SGF+THS ++ P +IP I +++LDS E P +R +GPVPNL
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVP-QIPLIQTEELDS-ELPSKRGIGPVPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGT-----MDGVSGARLELVCHYRLHGN 455
VVTAANV+E+Y+VRVQE+ +K + + SG T MDG+S A LELVCHYRLHGN
Sbjct: 59 VVTAANVIEIYVVRVQEEGSK------ESKNSGETKRRVLMDGISAASLELVCHYRLHGN 112
Query: 456 VESMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKR 635
VES+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKR
Sbjct: 113 VESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKR 172
Query: 636 GRESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIES 815
GRESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIES
Sbjct: 173 GRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIES 232
Query: 816 SYVINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSL 995
S+VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+L
Sbjct: 233 SHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTL 292
Query: 996 KQHPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESS 1175
KQHP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS
Sbjct: 293 KQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSS 352
Query: 1176 SEMPKSKFAVELDAANGTWLSPD 1244
E+P+S F+VELDAA+ TWL D
Sbjct: 353 QELPRSSFSVELDAAHATWLQND 375
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 533 bits (1373), Expect = e-149
Identities = 259/383 (67%), Positives = 318/383 (83%), Gaps = 5/383 (1%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERRVGPVPNL 290
MS+AA+KMMH TGI +C SGF+THS ++ P +IP I +++LDS E P +R +GPVPNL
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVP-QIPLIQTEELDS-ELPSKRGIGPVPNL 58
Query: 291 VVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGT-----MDGVSGARLELVCHYRLHGN 455
VVTAANV+E+Y+VRVQE+ +K + + SG T MDG+S A LELVCHYRLHGN
Sbjct: 59 VVTAANVIEIYVVRVQEEGSK------ESKNSGETKRRVLMDGISAASLELVCHYRLHGN 112
Query: 456 VESMTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKR 635
VES+ ILS G +++ RRDSI+LAF+DAKI+VLE+DDS HGLR +SMHCFE P+W +LKR
Sbjct: 113 VESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKR 172
Query: 636 GRESFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIES 815
GRESFA+GP+++ DP GRC GVL+YGLQMIILKA+Q G GLVGD++ SGG S RIES
Sbjct: 173 GRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIES 232
Query: 816 SYVINLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSL 995
S+VINLRDLDMKHVKDF FVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+L
Sbjct: 233 SHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTL 292
Query: 996 KQHPMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESS 1175
KQHP+IWSA N+PHDAYKLLAVPSPIGGVLV+ ANTIHY+SQS SC+L LN++ + +SS
Sbjct: 293 KQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSS 352
Query: 1176 SEMPKSKFAVELDAANGTWLSPD 1244
E+P+S F+VELDAA+ TWL D
Sbjct: 353 QELPRSSFSVELDAAHATWLQND 375
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 533 bits (1372), Expect = e-149
Identities = 263/380 (69%), Positives = 311/380 (81%), Gaps = 2/380 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR--VGPVP 284
MS+AA+KMM TGI++CA+GF+THS S + P+ DDLD+ EWP R VG +P
Sbjct: 1 MSFAAYKMMQCPTGIDNCAAGFLTHSRS-----DFVPLQPDDLDA-EWPSRPRHHVGSLP 54
Query: 285 NLVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVES 464
NLVVTAANVLEVY VR+QED +A+ D R G +DG++GA LELVCHYRLHGNVE+
Sbjct: 55 NLVVTAANVLEVYAVRLQEDQPP--KAAADSR-RGALLDGIAGASLELVCHYRLHGNVET 111
Query: 465 MTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRE 644
M +LS+G + + RRDSIML F DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGRE
Sbjct: 112 MAVLSIGGGDVSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGRE 171
Query: 645 SFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYV 824
FA+GPV++ DP GRC GVLIY LQMIILKA Q G GLVG+D+ S GAV+ RIESSY+
Sbjct: 172 QFARGPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYM 231
Query: 825 INLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQH 1004
INLRDLDM+HVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQH
Sbjct: 232 INLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQH 291
Query: 1005 PMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEM 1184
P+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LNS+ + +SS E+
Sbjct: 292 PLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQEI 351
Query: 1185 PKSKFAVELDAANGTWLSPD 1244
P+S F VELDAAN TWL D
Sbjct: 352 PRSSFNVELDAANATWLLSD 371
>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Glycine max]
Length = 1449
Score = 532 bits (1371), Expect = e-148
Identities = 258/380 (67%), Positives = 312/380 (82%), Gaps = 2/380 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGERR--VGPVP 284
MS+AA+KMM TGI++CA+GF+THS S + P+ DDLD++EWP R VGP+P
Sbjct: 1 MSFAAYKMMQCPTGIDNCAAGFLTHSRS-----DFVPLQPDDLDAAEWPSRPRHHVGPLP 55
Query: 285 NLVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVES 464
NLVVTAANVLEVY VR+QED + + +RG+ +DG++GA LEL CHYRLHGNVE+
Sbjct: 56 NLVVTAANVLEVYAVRLQEDQQPKDASDDSRRGT--LLDGIAGASLELECHYRLHGNVET 113
Query: 465 MTILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRE 644
M +LS+G + + +RDSI+L F DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGRE
Sbjct: 114 MAVLSIGGGDVSRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGRE 173
Query: 645 SFAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYV 824
FA+GPV++ DP GRC GVLIY LQMIILKA QVG GLVGDD+ S GAV+ RIESSY+
Sbjct: 174 QFARGPVVKIDPQGRCGGVLIYDLQMIILKATQVGSGLVGDDDAFGSSGAVAARIESSYM 233
Query: 825 INLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQH 1004
INLRDLDM+HVKDFTFV+GYIEPV+V+LHE+E TWAGR+SW HHTCMISALSI+T+LKQH
Sbjct: 234 INLRDLDMRHVKDFTFVYGYIEPVMVILHERELTWAGRVSWTHHTCMISALSISTTLKQH 293
Query: 1005 PMIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEM 1184
P+IWSA N+PHDAYKLLAVPSPIGGVLVI ANTIHY+SQS SC+L LN++ + +SS E+
Sbjct: 294 PLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNNYAVTLDSSQEI 353
Query: 1185 PKSKFAVELDAANGTWLSPD 1244
P+S F VELDAAN TWL D
Sbjct: 354 PRSSFNVELDAANATWLLSD 373
>gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus vulgaris]
Length = 1445
Score = 531 bits (1367), Expect = e-148
Identities = 257/379 (67%), Positives = 314/379 (82%), Gaps = 1/379 (0%)
Frame = +3
Query: 111 MSYAAFKMMHLATGIEHCASGFVTHSPSNSTPAEIPPINSDDLDSSEWPGE-RRVGPVPN 287
MS+AA+KMM +TGI++CA+GF+THS ++S P + +DLD+ EWP RRVGP+PN
Sbjct: 1 MSFAAYKMMQCSTGIDNCAAGFLTHSRADSVP-----LQPEDLDA-EWPSRPRRVGPLPN 54
Query: 288 LVVTAANVLEVYLVRVQEDDNKTLRASEDQRGSGGTMDGVSGARLELVCHYRLHGNVESM 467
LVVTAANVLEVY VR+QED +A++ +RG+ +DG+ GA LELVCHYRLHGNVE+M
Sbjct: 55 LVVTAANVLEVYTVRIQEDQPP--KAADPRRGT--LLDGIDGASLELVCHYRLHGNVETM 110
Query: 468 TILSLGADNHNNRRDSIMLAFQDAKITVLEYDDSSHGLRTSSMHCFEGPDWQYLKRGRES 647
+LS+G + + +RDSI+L F DAKI+VLEYDDS HGLRTSS+HCFEGP+W +LKRGRE
Sbjct: 111 AVLSIGGGDASRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQ 170
Query: 648 FAKGPVIQADPLGRCSGVLIYGLQMIILKAAQVGQGLVGDDEPTTSGGAVSVRIESSYVI 827
FA+GPV++ DP GRC G LIY LQMIILKA Q G GLVGDD+ GAV+ RIESSY+I
Sbjct: 171 FARGPVVKVDPQGRCGGTLIYDLQMIILKATQAGSGLVGDDDALGFSGAVAARIESSYMI 230
Query: 828 NLRDLDMKHVKDFTFVHGYIEPVLVVLHEKEPTWAGRISWKHHTCMISALSINTSLKQHP 1007
NLRDLDM+HVKDFTFVHGYIEPV+V+LHE+E TWAGR+SWKHHTCMISALSI+T+LKQHP
Sbjct: 231 NLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHP 290
Query: 1008 MIWSASNIPHDAYKLLAVPSPIGGVLVICANTIHYYSQSISCSLCLNSFGLQPESSSEMP 1187
+IWSA N+PHDAYKLLAVPSPIGGVLVI ANT+HY+SQS SC+L LNS+ + ++S E+P
Sbjct: 291 LIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTVHYHSQSASCALALNSYAVSLDNSQEIP 350
Query: 1188 KSKFAVELDAANGTWLSPD 1244
+S F VELD+AN TWL D
Sbjct: 351 RSSFNVELDSANATWLLSD 369