BLASTX nr result
ID: Zingiber25_contig00020283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00020283
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001045091.1| Os01g0897800 [Oryza sativa Japonica Group] g... 117 2e-24
gb|AAP79440.1| cohesin-like protein [Oryza sativa Indica Group] ... 117 2e-24
gb|AFW84302.1| hypothetical protein ZEAMMB73_139574 [Zea mays] 117 2e-24
ref|XP_004970907.1| PREDICTED: uncharacterized protein LOC101769... 116 3e-24
ref|XP_004970906.1| PREDICTED: uncharacterized protein LOC101769... 116 3e-24
ref|XP_002458921.1| hypothetical protein SORBIDRAFT_03g042710 [S... 115 5e-24
gb|AAQ21081.1| Rad21/Rec8-like protein [Oryza sativa] 115 5e-24
dbj|BAN04694.1| cohesin subunit RAD21-1, partial [Allium cepa] 114 2e-23
dbj|BAN04692.1| cohesin subunit RAD21-1 [Allium cepa] 114 2e-23
ref|XP_006645171.1| PREDICTED: uncharacterized protein LOC102709... 112 5e-23
ref|XP_003564840.1| PREDICTED: uncharacterized protein LOC100841... 112 7e-23
ref|NP_001169484.1| uncharacterized protein LOC100383357 [Zea ma... 110 3e-22
gb|EMS67118.1| Double-strand-break repair protein rad21-like pro... 108 6e-22
ref|XP_006587800.1| PREDICTED: uncharacterized protein LOC100809... 108 7e-22
ref|XP_003533578.1| PREDICTED: uncharacterized protein LOC100809... 108 7e-22
gb|EMT13830.1| Double-strand-break repair protein rad21-like pro... 107 1e-21
ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com... 107 1e-21
ref|XP_002315112.2| hypothetical protein POPTR_0010s18580g [Popu... 107 2e-21
ref|XP_003624224.1| Double-strand-break repair protein rad21-lik... 106 4e-21
ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263... 105 5e-21
>ref|NP_001045091.1| Os01g0897800 [Oryza sativa Japonica Group]
gi|56784327|dbj|BAD82348.1| putative RAD21-3 [Oryza
sativa Japonica Group] gi|56785276|dbj|BAD82185.1|
putative RAD21-3 [Oryza sativa Japonica Group]
gi|113534622|dbj|BAF07005.1| Os01g0897800 [Oryza sativa
Japonica Group] gi|222619681|gb|EEE55813.1| hypothetical
protein OsJ_04411 [Oryza sativa Japonica Group]
Length = 1055
Score = 117 bits (293), Expect = 2e-24
Identities = 57/78 (73%), Positives = 69/78 (88%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL++GK+RKEASRMFFETLVL
Sbjct: 966 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLLSGKTRKEASRMFFETLVL 1025
Query: 56 KTKDYIHVEQEDSSGFIT 3
TKD+I V+Q +S F++
Sbjct: 1026 TTKDFISVDQPNSFDFVS 1043
>gb|AAP79440.1| cohesin-like protein [Oryza sativa Indica Group]
gi|218189531|gb|EEC71958.1| hypothetical protein
OsI_04789 [Oryza sativa Indica Group]
Length = 1055
Score = 117 bits (293), Expect = 2e-24
Identities = 57/78 (73%), Positives = 69/78 (88%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL++GK+RKEASRMFFETLVL
Sbjct: 966 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLLSGKTRKEASRMFFETLVL 1025
Query: 56 KTKDYIHVEQEDSSGFIT 3
TKD+I V+Q +S F++
Sbjct: 1026 TTKDFISVDQPNSFDFVS 1043
>gb|AFW84302.1| hypothetical protein ZEAMMB73_139574 [Zea mays]
Length = 1166
Score = 117 bits (292), Expect = 2e-24
Identities = 57/79 (72%), Positives = 68/79 (86%)
Frame = -2
Query: 239 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLV 60
+E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+ GK+RKEASRMFFETLV
Sbjct: 1076 SEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLVRGKTRKEASRMFFETLV 1135
Query: 59 LKTKDYIHVEQEDSSGFIT 3
L TKDYI V+Q + F++
Sbjct: 1136 LTTKDYISVDQPNPFDFVS 1154
>ref|XP_004970907.1| PREDICTED: uncharacterized protein LOC101769240 isoform X2 [Setaria
italica]
Length = 1049
Score = 116 bits (291), Expect = 3e-24
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+ GK+RKEASRMFFETLVL
Sbjct: 960 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLVRGKTRKEASRMFFETLVL 1019
Query: 56 KTKDYIHVEQEDSSGFIT 3
TKDYI V+Q + F++
Sbjct: 1020 TTKDYISVDQPNPFDFVS 1037
>ref|XP_004970906.1| PREDICTED: uncharacterized protein LOC101769240 isoform X1 [Setaria
italica]
Length = 1063
Score = 116 bits (291), Expect = 3e-24
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL+ GK+RKEASRMFFETLVL
Sbjct: 974 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLVRGKTRKEASRMFFETLVL 1033
Query: 56 KTKDYIHVEQEDSSGFIT 3
TKDYI V+Q + F++
Sbjct: 1034 TTKDYISVDQPNPFDFVS 1051
>ref|XP_002458921.1| hypothetical protein SORBIDRAFT_03g042710 [Sorghum bicolor]
gi|241930896|gb|EES04041.1| hypothetical protein
SORBIDRAFT_03g042710 [Sorghum bicolor]
Length = 1088
Score = 115 bits (289), Expect = 5e-24
Identities = 56/79 (70%), Positives = 68/79 (86%)
Frame = -2
Query: 239 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLV 60
+E SL+NSGWSSRTRGVAR+LK +FDE+SG GRKSVA+DHL+ GK+RKEASRMFFETLV
Sbjct: 998 SEFQSLDNSGWSSRTRGVARYLKTLFDEDSGLGRKSVAIDHLVRGKTRKEASRMFFETLV 1057
Query: 59 LKTKDYIHVEQEDSSGFIT 3
L TKDYI V+Q + F++
Sbjct: 1058 LTTKDYISVDQPNPYDFVS 1076
>gb|AAQ21081.1| Rad21/Rec8-like protein [Oryza sativa]
Length = 1055
Score = 115 bits (289), Expect = 5e-24
Identities = 56/78 (71%), Positives = 69/78 (88%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+DHL++GK+RKEASRMFFETLVL
Sbjct: 966 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLLSGKTRKEASRMFFETLVL 1025
Query: 56 KTKDYIHVEQEDSSGFIT 3
TKD+I V++ +S F++
Sbjct: 1026 TTKDFISVDRPNSFDFVS 1043
>dbj|BAN04694.1| cohesin subunit RAD21-1, partial [Allium cepa]
Length = 1090
Score = 114 bits (284), Expect = 2e-23
Identities = 58/80 (72%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -2
Query: 242 HAEDA-SLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFET 66
+AEDA SLE GWS+RTRGVA +LK +FD+ESG GRKSVA+D L+AGK+RKEASRMFFET
Sbjct: 998 NAEDAQSLETVGWSARTRGVANYLKIMFDQESGRGRKSVAIDQLLAGKTRKEASRMFFET 1057
Query: 65 LVLKTKDYIHVEQEDSSGFI 6
LVLKT+DYI VEQE +I
Sbjct: 1058 LVLKTRDYIQVEQEKPYAYI 1077
>dbj|BAN04692.1| cohesin subunit RAD21-1 [Allium cepa]
Length = 1825
Score = 114 bits (284), Expect = 2e-23
Identities = 58/80 (72%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -2
Query: 242 HAEDA-SLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFET 66
+AEDA SLE GWS+RTRGVA +LK +FD+ESG GRKSVA+D L+AGK+RKEASRMFFET
Sbjct: 1733 NAEDAQSLETVGWSARTRGVANYLKIMFDQESGRGRKSVAIDQLLAGKTRKEASRMFFET 1792
Query: 65 LVLKTKDYIHVEQEDSSGFI 6
LVLKT+DYI VEQE +I
Sbjct: 1793 LVLKTRDYIQVEQEKPYAYI 1812
>ref|XP_006645171.1| PREDICTED: uncharacterized protein LOC102709790 [Oryza brachyantha]
Length = 1060
Score = 112 bits (280), Expect = 5e-23
Identities = 55/78 (70%), Positives = 67/78 (85%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FDEESG GRKSVA+D L++GK+RKEASRMFFETLVL
Sbjct: 971 EFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDRLLSGKTRKEASRMFFETLVL 1030
Query: 56 KTKDYIHVEQEDSSGFIT 3
TKD+I V+Q + F++
Sbjct: 1031 TTKDFISVDQPNPFDFVS 1048
>ref|XP_003564840.1| PREDICTED: uncharacterized protein LOC100841414 [Brachypodium
distachyon]
Length = 1077
Score = 112 bits (279), Expect = 7e-23
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = -2
Query: 215 SGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVLKTKDYIH 36
SGWSSRTRGVAR+LK +FDEESG GRK++A+DHL+ GK+RKEASRMFFETLVL TKDYIH
Sbjct: 995 SGWSSRTRGVARYLKTLFDEESGLGRKNIAIDHLLRGKTRKEASRMFFETLVLSTKDYIH 1054
Query: 35 VEQEDSSGFIT 3
V+Q + F++
Sbjct: 1055 VDQPNPFDFVS 1065
>ref|NP_001169484.1| uncharacterized protein LOC100383357 [Zea mays]
gi|224029613|gb|ACN33882.1| unknown [Zea mays]
gi|414879205|tpg|DAA56336.1| TPA: hypothetical protein
ZEAMMB73_378457 [Zea mays] gi|414879206|tpg|DAA56337.1|
TPA: hypothetical protein ZEAMMB73_378457 [Zea mays]
Length = 1183
Score = 110 bits (274), Expect = 3e-22
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E SL+NSGWSSRTRGVAR+LK +FD+ESG RKSVA+DHL+ GK+RKEASRMFFETLVL
Sbjct: 1094 EFQSLDNSGWSSRTRGVARYLKALFDDESGLERKSVAIDHLVRGKTRKEASRMFFETLVL 1153
Query: 56 KTKDYIHVEQ 27
TKDYI V+Q
Sbjct: 1154 TTKDYISVDQ 1163
>gb|EMS67118.1| Double-strand-break repair protein rad21-like protein [Triticum
urartu]
Length = 1584
Score = 108 bits (271), Expect = 6e-22
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -2
Query: 215 SGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVLKTKDYIH 36
SGWSSRT+GVAR+LK +FDEESG GRK+V +DHL+ GKSRKEASRMFFETLVL TKDYI
Sbjct: 1502 SGWSSRTKGVARYLKTLFDEESGRGRKNVVIDHLVNGKSRKEASRMFFETLVLSTKDYIQ 1561
Query: 35 VEQEDSSGFI 6
VEQ G I
Sbjct: 1562 VEQPIPFGLI 1571
>ref|XP_006587800.1| PREDICTED: uncharacterized protein LOC100809967 isoform X2 [Glycine
max]
Length = 1224
Score = 108 bits (270), Expect = 7e-22
Identities = 50/71 (70%), Positives = 62/71 (87%)
Frame = -2
Query: 239 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLV 60
AE +LENSGWSSRTR VA++L+ VFD+E HGRK + +D+L+ GK+RKEASRMFFETLV
Sbjct: 1134 AEGTNLENSGWSSRTRAVAKYLQTVFDKEDLHGRKELHLDNLLVGKTRKEASRMFFETLV 1193
Query: 59 LKTKDYIHVEQ 27
LKT+DY+HVEQ
Sbjct: 1194 LKTRDYVHVEQ 1204
>ref|XP_003533578.1| PREDICTED: uncharacterized protein LOC100809967 isoform X1 [Glycine
max]
Length = 1247
Score = 108 bits (270), Expect = 7e-22
Identities = 50/71 (70%), Positives = 62/71 (87%)
Frame = -2
Query: 239 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLV 60
AE +LENSGWSSRTR VA++L+ VFD+E HGRK + +D+L+ GK+RKEASRMFFETLV
Sbjct: 1157 AEGTNLENSGWSSRTRAVAKYLQTVFDKEDLHGRKELHLDNLLVGKTRKEASRMFFETLV 1216
Query: 59 LKTKDYIHVEQ 27
LKT+DY+HVEQ
Sbjct: 1217 LKTRDYVHVEQ 1227
>gb|EMT13830.1| Double-strand-break repair protein rad21-like protein 1 [Aegilops
tauschii]
Length = 1462
Score = 107 bits (268), Expect = 1e-21
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = -2
Query: 215 SGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVLKTKDYIH 36
SGWSSRT+GVAR+LK +FDEESG GRK+V +DHL+ GKSRKEASRMFFETLVL TKDYI
Sbjct: 1380 SGWSSRTKGVARYLKTLFDEESGRGRKNVVIDHLVHGKSRKEASRMFFETLVLSTKDYIQ 1439
Query: 35 VEQEDSSGFI 6
V+Q G I
Sbjct: 1440 VDQPIPFGLI 1449
>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
putative [Ricinus communis]
Length = 1247
Score = 107 bits (268), Expect = 1e-21
Identities = 52/73 (71%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
Frame = -2
Query: 242 HAEDASL-ENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFET 66
+AED L ENSGWSSRTR VA++L+ +FD+E+ HGRK + MD+L+ GK+RKEASRMFFET
Sbjct: 1155 NAEDPRLLENSGWSSRTRAVAKYLQTLFDKEAEHGRKVLLMDNLLTGKTRKEASRMFFET 1214
Query: 65 LVLKTKDYIHVEQ 27
LVLKTKDY+HVEQ
Sbjct: 1215 LVLKTKDYVHVEQ 1227
>ref|XP_002315112.2| hypothetical protein POPTR_0010s18580g [Populus trichocarpa]
gi|550330098|gb|EEF01283.2| hypothetical protein
POPTR_0010s18580g [Populus trichocarpa]
Length = 1052
Score = 107 bits (266), Expect = 2e-21
Identities = 51/71 (71%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = -2
Query: 236 EDASL-ENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLV 60
EDA L +NSGWSSRTR VA++L+ +FD E G+GRK +++D L+AGK+RKEASRMFFETLV
Sbjct: 962 EDARLLDNSGWSSRTRAVAKYLQTIFDNEGGNGRKVISVDSLLAGKTRKEASRMFFETLV 1021
Query: 59 LKTKDYIHVEQ 27
LKT+DYIHVEQ
Sbjct: 1022 LKTRDYIHVEQ 1032
>ref|XP_003624224.1| Double-strand-break repair protein rad21-like protein [Medicago
truncatula] gi|355499239|gb|AES80442.1|
Double-strand-break repair protein rad21-like protein
[Medicago truncatula]
Length = 1487
Score = 106 bits (264), Expect = 4e-21
Identities = 48/71 (67%), Positives = 63/71 (88%)
Frame = -2
Query: 239 AEDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLV 60
AE LENSGWSSRTR VA++L+ +FD+E HGR+++ +D+++AGK+RKEASRMFFETLV
Sbjct: 1397 AEGTHLENSGWSSRTRAVAKYLQTLFDKEELHGRQNLHLDNILAGKTRKEASRMFFETLV 1456
Query: 59 LKTKDYIHVEQ 27
LKT+DY+HVEQ
Sbjct: 1457 LKTRDYVHVEQ 1467
>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
Length = 1335
Score = 105 bits (263), Expect = 5e-21
Identities = 49/71 (69%), Positives = 63/71 (88%)
Frame = -2
Query: 236 EDASLENSGWSSRTRGVARFLKKVFDEESGHGRKSVAMDHLIAGKSRKEASRMFFETLVL 57
E+ LENSGWSSRTR VA++L+ +FD+E+ HG+K + M++L+AGK+RKEASRMFFETLVL
Sbjct: 1246 ENRFLENSGWSSRTRAVAKYLQNLFDKEAEHGKKVIPMNNLLAGKTRKEASRMFFETLVL 1305
Query: 56 KTKDYIHVEQE 24
KT+DYI VEQE
Sbjct: 1306 KTRDYIQVEQE 1316