BLASTX nr result
ID: Zingiber25_contig00020196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00020196
(372 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 69 8e-10
gb|AET09699.1| putative coat protein [Citrus yellow mosaic virus] 68 1e-09
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 68 1e-09
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 68 1e-09
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 68 1e-09
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 67 2e-09
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 67 2e-09
emb|CCL97781.2| polyprotein, partial [Mulberry badnavirus 1] 67 2e-09
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 67 2e-09
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 67 2e-09
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16... 67 2e-09
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 65 9e-09
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 62 6e-08
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478... 62 6e-08
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 62 6e-08
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus] 62 6e-08
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus] 62 8e-08
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus] 61 1e-07
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus] 61 1e-07
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus] 61 2e-07
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
C+DAAFKRSLK LSFCS IPIP Y +RRS+TYKGKPH++HAR+E
Sbjct: 751 CRDAAFKRSLKNLSFCSSIPIP---GYYKNTGKKYGVRRSKTYKGKPHESHARIE 802
>gb|AET09699.1| putative coat protein [Citrus yellow mosaic virus]
Length = 214
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH+THAR+E
Sbjct: 127 CKDAAFRRSLKNLSFCSSIPIP-GYYGGRSSEKRYGIRRTTTYKGKPHNTHARIE 180
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH+THAR+E
Sbjct: 856 CKDAAFRRSLKNLSFCSSIPIP-GYYGGRSSEKRYGIRRTTTYKGKPHNTHARIE 909
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH+THAR+E
Sbjct: 856 CKDAAFRRSLKNLSFCSSIPIP-GYYGGRSSERRYGIRRTTTYKGKPHNTHARIE 909
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH+THAR+E
Sbjct: 856 CKDAAFRRSLKNLSFCSSIPIP-GYYGGRSSEKRYGIRRTTTYKGKPHNTHARIE 909
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH+THAR+E
Sbjct: 848 CKDAAFRRSLKNLSFCSSIPIP-GYYGGRSGEKRYGVRRTTTYKGKPHNTHARIE 901
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH+THAR+E
Sbjct: 372 CKDAAFRRSLKNLSFCSSIPIP-GYYGGRSGEKRYGVRRTTTYKGKPHNTHARIE 425
>emb|CCL97781.2| polyprotein, partial [Mulberry badnavirus 1]
Length = 270
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
C++AAF RSLKGL FC IPIP LRRS+TYKGKPH TH R++
Sbjct: 190 CREAAFARSLKGLDFCKDIPIPGYYQSRRNTGKRNSLRRSQTYKGKPHSTHIRID 244
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/55 (61%), Positives = 38/55 (69%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH THAR+E
Sbjct: 863 CKDAAFRRSLKNLSFCSSIPIP-GYYGGKSGEKRYGVRRTTTYKGKPHSTHARIE 916
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/55 (61%), Positives = 38/55 (69%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH THAR+E
Sbjct: 849 CKDAAFRRSLKNLSFCSSIPIP-GYYGGKSGEKRYGVRRTTTYKGKPHSTHARIE 902
>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
yellow mosaic virus]
Length = 1983
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/55 (61%), Positives = 38/55 (69%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAF+RSLK LSFCS IPIP Y +RR+ TYKGKPH THAR+E
Sbjct: 864 CKDAAFRRSLKNLSFCSSIPIP-GYYGGKSGEKRYGVRRTTTYKGKPHSTHARIE 917
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CK+AAF+RSLK LSFCS++P+P Y +RRS TYKGKPH THAR+E
Sbjct: 775 CKEAAFRRSLKNLSFCSEMPLP----GYYGEKKRYGVRRSTTYKGKPHPTHARIE 825
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CK+AAF+RSLKG++FC+ IPIP +RRS TYKGKPH +H R+E
Sbjct: 831 CKEAAFQRSLKGMTFCNSIPIP----GYYSKEKKMGVRRSTTYKGKPHSSHVRIE 881
>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +R+SRTYKGKPH +HARVE
Sbjct: 725 CKDAAFKRSLKSLSFCKDMPL----TGYYDKTSKYGMRKSRTYKGKPHASHARVE 775
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
Length = 1868
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +RRS+TYKGKPH +HARVE
Sbjct: 756 CKDAAFKRSLKSLSFCKDMPL----TGYYDKAPRYGMRRSKTYKGKPHASHARVE 806
>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +R+SRTYKGKPH +HARVE
Sbjct: 725 CKDAAFKRSLKSLSFCKDMPL----TGYYDKTSKYGMRKSRTYKGKPHASHARVE 775
>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +RRS+TYKGKPH +HAR+E
Sbjct: 758 CKDAAFKRSLKSLSFCKDMPL----TGYYDKSSRYGMRRSKTYKGKPHASHARIE 808
>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +R+S+TYKGKPH +HARVE
Sbjct: 730 CKDAAFKRSLKSLSFCKDMPL----TGYYDKTPKYGMRKSKTYKGKPHASHARVE 780
>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
Length = 1770
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +R+S+TYKGKPH +HARVE
Sbjct: 653 CKDAAFKRSLKSLSFCKDMPL----TGYYDKTPKYGMRKSKTYKGKPHASHARVE 703
>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
Length = 1816
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = -2
Query: 170 CKDAAFKRSLKGLSFCSQIPIPXXXXXXXXXXXXYDLRRSRTYKGKPHDTHARVE 6
CKDAAFKRSLK LSFC +P+ Y +R+S+TYKGKPH +HAR+E
Sbjct: 729 CKDAAFKRSLKSLSFCKDMPL----TGYYDKTPKYGMRKSKTYKGKPHASHARIE 779