BLASTX nr result

ID: Zingiber25_contig00020076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020076
         (474 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563792.3| DOF transcription factor OBP2 [Arabidopsis thal...    56   4e-06
gb|AAM65740.1| zinc finger protein OBP2 [Arabidopsis thaliana]         56   4e-06
ref|NP_001030988.1| DOF transcription factor OBP2 [Arabidopsis t...    56   4e-06
ref|NP_850938.1| DOF transcription factor OBP2 [Arabidopsis thal...    56   4e-06

>ref|NP_563792.3| DOF transcription factor OBP2 [Arabidopsis thaliana]
           gi|60392196|sp|Q8L9V6.2|DOF11_ARATH RecName: Full=Dof
           zinc finger protein DOF1.1; Short=AtDOF1.1; AltName:
           Full=OBF-binding protein 2 gi|332190031|gb|AEE28152.1|
           Dof zinc finger protein DOF1.1 [Arabidopsis thaliana]
          Length = 331

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 360 GSAKAERKKQSVRTAAAAPLSCPRCESTNTKFCYYNNY 473
           G + AER +Q+     A PL CPRC+S+NTKFCYYNNY
Sbjct: 58  GGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNY 95


>gb|AAM65740.1| zinc finger protein OBP2 [Arabidopsis thaliana]
          Length = 331

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 360 GSAKAERKKQSVRTAAAAPLSCPRCESTNTKFCYYNNY 473
           G + AER +Q+     A PL CPRC+S+NTKFCYYNNY
Sbjct: 58  GGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNY 95


>ref|NP_001030988.1| DOF transcription factor OBP2 [Arabidopsis thaliana]
           gi|8439908|gb|AAF75094.1|AC007583_30 Strong similarity
           to zinc finger protein OBP2 from Arabidopsis thaliana
           gb|AF155816. EST gb|N65215 comes from this gene
           [Arabidopsis thaliana] gi|332190033|gb|AEE28154.1| Dof
           zinc finger protein DOF1.1 [Arabidopsis thaliana]
          Length = 339

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 360 GSAKAERKKQSVRTAAAAPLSCPRCESTNTKFCYYNNY 473
           G + AER +Q+     A PL CPRC+S+NTKFCYYNNY
Sbjct: 66  GGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNY 103


>ref|NP_850938.1| DOF transcription factor OBP2 [Arabidopsis thaliana]
           gi|17065278|gb|AAL32793.1| Strong similarity to zinc
           finger protein OBP2 [Arabidopsis thaliana]
           gi|20260006|gb|AAM13350.1| strong similarity to zinc
           finger protein OBP2 [Arabidopsis thaliana]
           gi|332190032|gb|AEE28153.1| Dof zinc finger protein
           DOF1.1 [Arabidopsis thaliana]
          Length = 275

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 360 GSAKAERKKQSVRTAAAAPLSCPRCESTNTKFCYYNNY 473
           G + AER +Q+     A PL CPRC+S+NTKFCYYNNY
Sbjct: 2   GGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNY 39


Top