BLASTX nr result

ID: Zingiber25_contig00020066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020066
         (286 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ19191.1| hypothetical protein PRUPE_ppa005629mg [Prunus pe...    56   4e-06
ref|XP_006386561.1| hypothetical protein POPTR_0002s14430g [Popu...    55   7e-06
ref|XP_002301261.2| hypothetical protein POPTR_0002s14430g [Popu...    55   7e-06

>gb|EMJ19191.1| hypothetical protein PRUPE_ppa005629mg [Prunus persica]
          Length = 450

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 124 MSAGGWDASG-DHRRLAGVLPDPYTALMACQMAQQQPMSLDEYSRMAALFQQFYQ 285
           M    WD SG D    A V+PDP +A +ACQ    QPM++D YS MAA++QQF+Q
Sbjct: 391 MPMASWDGSGGDRSASATVMPDPLSAFLACQ---SQPMTMDAYSMMAAMYQQFHQ 442


>ref|XP_006386561.1| hypothetical protein POPTR_0002s14430g [Populus trichocarpa]
           gi|550345013|gb|ERP64358.1| hypothetical protein
           POPTR_0002s14430g [Populus trichocarpa]
          Length = 484

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
 Frame = +1

Query: 139 WDASGDHRRL------AGVLPDPYTALMACQMAQQQPMSLDEYSRMAALFQQFYQ 285
           WD S  H RL      A V+PDP +A +ACQ    QPM++D YSRMA+++QQ +Q
Sbjct: 424 WDGSNSHERLPTAAPSATVMPDPLSAFLACQ---SQPMTMDAYSRMASMYQQLHQ 475


>ref|XP_002301261.2| hypothetical protein POPTR_0002s14430g [Populus trichocarpa]
           gi|550345012|gb|EEE80534.2| hypothetical protein
           POPTR_0002s14430g [Populus trichocarpa]
          Length = 432

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
 Frame = +1

Query: 139 WDASGDHRRL------AGVLPDPYTALMACQMAQQQPMSLDEYSRMAALFQQFYQ 285
           WD S  H RL      A V+PDP +A +ACQ    QPM++D YSRMA+++QQ +Q
Sbjct: 372 WDGSNSHERLPTAAPSATVMPDPLSAFLACQ---SQPMTMDAYSRMASMYQQLHQ 423


Top