BLASTX nr result

ID: Zingiber25_contig00020063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020063
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55288.1| sucrose transporter [Asparagus officinalis]             88   1e-15
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein...    87   2e-15
gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegi...    86   4e-15
gb|EMS56445.1| RNA polymerase-associated protein RTF1-like prote...    86   4e-15
dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]     86   4e-15
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi...    85   1e-14
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo...    85   1e-14
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g...    85   1e-14
ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein...    83   3e-14
ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea ma...    80   2e-13
ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293...    80   2e-13
ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S...    74   2e-11
ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein...    73   3e-11

>gb|ABB55288.1| sucrose transporter [Asparagus officinalis]
          Length = 793

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/53 (83%), Positives = 48/53 (90%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSKM 263
           APSVGSDLYKD+ DKEEL KMSELDREMI+AERSTKIDDY LKK AR +SSK+
Sbjct: 398 APSVGSDLYKDEEDKEELEKMSELDREMILAERSTKIDDYMLKKKARETSSKV 450


>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
           brachyantha]
          Length = 645

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/52 (80%), Positives = 49/52 (94%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE+L K+SELDREMI+AERS +IDDYKLK++ARASSSK
Sbjct: 100 APSVGSDLYKDEEDKEQLEKLSELDREMILAERSARIDDYKLKQLARASSSK 151


>gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegilops tauschii]
          Length = 661

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE+L  M+EL REMI+AERST+IDDYKLKK+ARASSSK
Sbjct: 114 APSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSK 165


>gb|EMS56445.1| RNA polymerase-associated protein RTF1-like protein [Triticum
           urartu]
          Length = 681

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE+L  M+EL REMI+AERST+IDDYKLKK+ARASSSK
Sbjct: 135 APSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSK 186


>dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 661

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE+L  M+EL REMI+AERST+IDDYKLKK+ARASSSK
Sbjct: 114 APSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSK 165


>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
          Length = 780

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSS 257
           APSVGSDLYKD+ DKE+L KMSELDREMI+AER  +IDDYKLK++ARASSS
Sbjct: 239 APSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSS 289


>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
          Length = 653

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSS 257
           APSVGSDLYKD+ DKE+L KMSELDREMI+AER  +IDDYKLK++ARASSS
Sbjct: 112 APSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSS 162


>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
           gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
           [Oryza sativa Japonica Group]
          Length = 599

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSS 257
           APSVGSDLYKD+ DKE+L KMSELDREMI+AER  +IDDYKLK++ARASSS
Sbjct: 58  APSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSS 108


>ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Setaria
           italica]
          Length = 650

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 39/52 (75%), Positives = 48/52 (92%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE+L KMSELDRE+I+AERS++IDDYKLK+MAR+ + K
Sbjct: 104 APSVGSDLYKDEEDKEKLEKMSELDRELILAERSSRIDDYKLKQMARSKTGK 155


>ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
           gi|223950353|gb|ACN29260.1| unknown [Zea mays]
           gi|413916604|gb|AFW56536.1| plus-3 domain-containing
           protein [Zea mays]
          Length = 650

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE L  MSEL RE+I+AER T++DDYKLK+ ARASSSK
Sbjct: 102 APSVGSDLYKDEDDKERLENMSELQRELILAERGTRLDDYKLKQRARASSSK 153


>ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293|gb|ACL52521.1| unknown
           [Zea mays] gi|414878213|tpg|DAA55344.1| TPA:
           hypothetical protein ZEAMMB73_654453 [Zea mays]
          Length = 647

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE L  MSEL REMI+A+R T++DDYKLK+ ARASSSK
Sbjct: 99  APSVGSDLYKDEDDKERLENMSELQREMILADRGTRLDDYKLKQRARASSSK 150


>ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
           gi|241942942|gb|EES16087.1| hypothetical protein
           SORBIDRAFT_08g017010 [Sorghum bicolor]
          Length = 656

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKLKKMARASSSK 260
           APSVGSDLYKD+ DKE L  MSEL REMI+A+R T+  DYKLK+ ARAS SK
Sbjct: 106 APSVGSDLYKDEDDKERLENMSELQREMILADRGTRAADYKLKQRARASLSK 157


>ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Brachypodium distachyon]
          Length = 658

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/52 (69%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
 Frame = +3

Query: 105 APSVGSDLYKDDADKEELGKMSELDREMIMAERSTKIDDYKL-KKMARASSS 257
           APSVGSDLYKD+ DKE+L  M+EL REMI+AERST+ID+YKL KK+AR +++
Sbjct: 110 APSVGSDLYKDEDDKEQLENMTELQREMILAERSTRIDEYKLKKKLARTATT 161


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