BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00020060
         (1166 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243...   174   1e-47
ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826...   170   3e-47
ref|XP_004956830.1| PREDICTED: glycine, alanine and asparagine-r...   166   3e-45
gb|ESW10410.1| hypothetical protein PHAVU_009G207000g [Phaseolus...   164   4e-45
ref|NP_001141950.1| putative HLH DNA-binding domain superfamily ...   163   4e-45
tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily...   162   5e-45
ref|XP_006661232.1| PREDICTED: transcription factor UNE12-like, ...   157   5e-45
ref|XP_006343666.1| PREDICTED: transcription factor bHLH66-like ...   159   1e-44
ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group] g...   161   2e-44
ref|XP_004954215.1| PREDICTED: transcription factor bHLH66-like ...   170   3e-44
gb|EOY29579.1| LJRHL1-like 1 [Theobroma cacao]                        166   1e-43
ref|XP_003533887.2| PREDICTED: transcription factor bHLH66-like ...   165   1e-43
ref|XP_003546668.1| PREDICTED: transcription factor bHLH82-like ...   162   3e-43
ref|XP_006453668.1| hypothetical protein CICLE_v10008192mg [Citr...   157   8e-43
ref|XP_004242577.1| PREDICTED: transcription factor bHLH66-like ...   161   8e-43
ref|XP_006473971.1| PREDICTED: transcription factor bHLH66-like ...   157   1e-42
ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [S...   166   2e-42
ref|XP_002523493.1| conserved hypothetical protein [Ricinus comm...   158   5e-42
ref|NP_001151181.1| LOC100284814 [Zea mays] gi|195644858|gb|ACG4...   163   5e-42
ref|XP_004287121.1| PREDICTED: transcription factor bHLH66-like ...   155   7e-42

>ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
          Length = 519

 Score =  174 bits (442), Expect(2) = 1e-47
 Identities = 151/376 (40%), Positives = 182/376 (48%), Gaps = 76/376 (20%)
 Frame = +3

Query: 84   MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGS--------------------- 200
            MQP +R+MQ       ++N +   S QI+L +LQNGH                       
Sbjct: 1    MQPCSREMQ-------AINSLLNPS-QISLQDLQNGHHHHHHHQHQQQQQHQHHPQIPNP 52

Query: 201  ---QTPFDHGGSVGHDDFLDQMLSGLRSPWAELGAT-KSPWDAPDSEG---PTAAQRIFG 359
               Q P  H  S  HDDFL+QMLS L S W++L A  KSPW+   S     P+   R   
Sbjct: 53   SQIQLPNTHFDSSSHDDFLEQMLSTLPS-WSDLPANPKSPWELNASNPISMPSNKSRDL- 110

Query: 360  VGKEAEDGLPYAP------FDESALLANRLRQYQISGGSSPVGKAMMLPLSHHGQQQMLA 521
                ++D  P  P      FDESA+LA++LRQ+QISG SS    A+ML      QQQ+L 
Sbjct: 111  ----SDDTTPSNPDNVQFAFDESAMLASKLRQHQISGNSSAAKSALML------QQQLLL 160

Query: 522  T--------------SGDSGFLPLPLTLG---SC-------------GSVDSPNSTVGDG 611
            +              +G+SG L LPL+L    SC              S  SPN   GDG
Sbjct: 161  SRGVAMGRSPSNGSGAGESGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQG-GDG 219

Query: 612  ----LYNGFSGALQHT-ESANQ-HTFPHPQGAPMLGQNFGAAPLAPGLTQXXXXXXXXXX 773
                LYNGF+GAL  + +++NQ   F HPQG  M  QN+GA       T           
Sbjct: 220  SVQALYNGFAGALHGSGQASNQAQNFHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPA 279

Query: 774  XXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK------TD 935
                      RQ+VRARRGQATDPHS             MKALQELVPNANK      TD
Sbjct: 280  QP--------RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTD 331

Query: 936  KASMLDEIIDYVKFLQ 983
            KASMLDEIIDYVKFLQ
Sbjct: 332  KASMLDEIIDYVKFLQ 347



 Score = 43.5 bits (101), Expect(2) = 1e-47
 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGG------SSDSLTVTEHQVAKLM 1162
            +VLSMSR            DMSSE   ++G     A        S+DSLTVTEHQVAKLM
Sbjct: 360  QVLSMSRLGGAAAVAPLVADMSSEASGTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKLM 419

Query: 1163 E 1165
            E
Sbjct: 420  E 420


>ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
           distachyon]
          Length = 458

 Score =  170 bits (431), Expect(2) = 3e-47
 Identities = 131/311 (42%), Positives = 156/311 (50%), Gaps = 32/311 (10%)
 Frame = +3

Query: 147 AASSDQIALPELQN-GHGSQTPFDHGGSVGHDDFLDQMLSGLR-SPWAELGATKSPWDAP 320
           AA + QI++ +L+N GH      + GG   HDDFLDQM   L  S W EL    +    P
Sbjct: 5   AAGAGQISMGDLRNNGHAGPGGANGGGGGVHDDFLDQMFGSLPPSAWHELATAAAAAKPP 64

Query: 321 DSEGPTAAQRIFGVGKEAEDGLPYAPFDESALLANRLRQYQISGGSSPV----GKAMMLP 488
           + +     Q+ FG            P+DES +LA+RLRQ QISGG  P     G A  + 
Sbjct: 65  EDDSGMQQQQQFG-----------GPYDESVMLASRLRQNQISGGGGPGSGAGGAAKQMV 113

Query: 489 LSH----------HGQQQMLATS---GDSGFLPLPLTLGSCGSVD--------SPNSTVG 605
           L            HG   ML      GDSG + LPLTLG+ GS          + NS  G
Sbjct: 114 LQQLADLRQAGHGHGHHMMLQGGTGRGDSGMI-LPLTLGNGGSGGDVQALLKAAANSAGG 172

Query: 606 D-GLYNGFSGALQHTESANQHTFPHPQG-APMLGQNFGAAPLAPGLTQXXXXXXXXXXXX 779
           + G++ GF+G+LQ  +   QH  PHPQ  APM  Q FG    + G  Q            
Sbjct: 173 EAGVFGGFAGSLQQQQ---QHFQPHPQQTAPMPNQTFGGGAASGGGAQPQAGAGGGGGGG 229

Query: 780 XXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK---TDKASML 950
                   RQ+VRARRGQATDPHS             MKALQELVPNANK   TDKASML
Sbjct: 230 TQAPP---RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASML 286

Query: 951 DEIIDYVKFLQ 983
           DEIIDYVKFLQ
Sbjct: 287 DEIIDYVKFLQ 297



 Score = 46.6 bits (109), Expect(2) = 3e-47
 Identities = 30/54 (55%), Positives = 31/54 (57%)
 Frame = +2

Query: 1004 VLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGGSSDSLTVTEHQVAKLME 1165
            VLSMSR            DMSSEG+  AG     A   SDSLTVTE QVAKLME
Sbjct: 306  VLSMSRLGGAAAVAPLVADMSSEGRGGAGNGGGPAA-ESDSLTVTEQQVAKLME 358


>ref|XP_004956830.1| PREDICTED: glycine, alanine and asparagine-rich protein-like
           [Setaria italica]
          Length = 474

 Score =  166 bits (419), Expect(2) = 3e-45
 Identities = 135/328 (41%), Positives = 165/328 (50%), Gaps = 28/328 (8%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLS 263
           MQP+ R+MQ             A++ QI+L +L+   GS       G V HDDFLDQML 
Sbjct: 1   MQPTTREMQAM-----------AAAGQISLDDLRAAAGS------AGGV-HDDFLDQMLG 42

Query: 264 GLR-SPWAELGATKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPFDESALLANRLRQY 440
           GL  S W EL +      A  ++ P    +  G+ +          +DESALLA+RLRQ+
Sbjct: 43  GLPPSAWPELAS------AAGAKVPEGGAQAEGMQQHQHQQFGGGLYDESALLASRLRQH 96

Query: 441 QISGG-----SSPVGKAMMLPL------SHH----GQQQMLATSGDSGFLPLPLTLGSCG 575
           QISGG     S+   K M+L         HH    G  +     GD G L LPL+LGS G
Sbjct: 97  QISGGPGGAESAAAAKQMVLQQLADLRQGHHMLLQGMGRSTGGGGDGGLL-LPLSLGSGG 155

Query: 576 SVD--------SPNSTVGD--GLYNG-FSGALQHTESANQHTFPHPQG-APMLGQNFGAA 719
           S          + NS  G+  G++ G F+G+LQ  +  +QH   HPQ  AP+ GQ FG  
Sbjct: 156 SGGDVQALLKAAANSAGGEAGGVFGGAFAGSLQQQQ--HQHFQQHPQQTAPLPGQGFGGG 213

Query: 720 PLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKA 899
               G                       RQ+VRARRGQATDPHS             MKA
Sbjct: 214 GGGGGGGASAGASQPQAGASGGGAAAPPRQRVRARRGQATDPHSIAERLRRERIAERMKA 273

Query: 900 LQELVPNANKTDKASMLDEIIDYVKFLQ 983
           LQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 274 LQELVPNANKTDKASMLDEIIDYVKFLQ 301



 Score = 44.3 bits (103), Expect(2) = 3e-45
 Identities = 31/55 (56%), Positives = 32/55 (58%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGGSSDSLTVTEHQVAKLME 1165
            KVLSMSR            DMSSEG+   G A  AAG  SD L VTE QVAKLME
Sbjct: 305  KVLSMSRLGGAAAVAPLVADMSSEGR---GGAPAAAG--SDGLAVTEQQVAKLME 354


>gb|ESW10410.1| hypothetical protein PHAVU_009G207000g [Phaseolus vulgaris]
          Length = 471

 Score =  164 bits (415), Expect(2) = 4e-45
 Identities = 121/321 (37%), Positives = 152/321 (47%), Gaps = 21/321 (6%)
 Frame = +3

Query: 84  MQPSARDMQ----VQGKTAASLNGIAASSDQIALPELQNGHGSQTP-----FDHGGSVGH 236
           MQP +R+MQ    +   +  SL  +  +++QI    + N H  Q P       H      
Sbjct: 1   MQPCSREMQGINALFNSSQISLQDLHTTTNQIQNSHMNNHHHHQQPPLQHQLPHFDPTSQ 60

Query: 237 DDFLDQMLSGLRSPWAELGATKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPFDESAL 416
           DDFLDQM S     W +L   K  WD  +    T             + + + P+DE + 
Sbjct: 61  DDFLDQMFSS----WPDLNPNKPLWDPNNLSDQTTPSNNDNNNNNTNNNVAF-PYDEPST 115

Query: 417 LANRLRQYQISGGSSPVGKAMMLPLSHHGQQQMLATSGDSGFLPLPLTLGSCGSVD---- 584
           LA++ R +QIS  ++    A ++       Q  L  S DS  L +PL+L     VD    
Sbjct: 116 LASKFRDHQISASTTKDAAAALII------QHQLLMSRDSRLLHMPLSLPQNDVVDASSF 169

Query: 585 -SPN---STVGDGLYNGFSGALQHTESANQHT--FPHPQGA--PMLGQNFGAAPLAPGLT 740
            SPN    T    LYNGF+G+L     A+     F HPQG+  P+ GQNFGA        
Sbjct: 170 KSPNPGGDTSVQALYNGFAGSLHGAGQASNQAQHFQHPQGSSNPIQGQNFGAPGAGAATN 229

Query: 741 QXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPN 920
           Q                    RQ+VRARRGQATDPHS             MKALQELVPN
Sbjct: 230 QAPASGAPAQP----------RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPN 279

Query: 921 ANKTDKASMLDEIIDYVKFLQ 983
           ANKTDKASMLDEIIDYVKFLQ
Sbjct: 280 ANKTDKASMLDEIIDYVKFLQ 300



 Score = 45.4 bits (106), Expect(2) = 4e-45
 Identities = 32/70 (45%), Positives = 37/70 (52%), Gaps = 15/70 (21%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEG-----QSSAGRAVC----------AAGGSSDSLTV 1135
            KVLSMSR            DMSSEG     Q++ G A+            A  S+DSLT+
Sbjct: 304  KVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGGVALAPNSNSNHNQTTASASNDSLTM 363

Query: 1136 TEHQVAKLME 1165
            TEHQVAKLME
Sbjct: 364  TEHQVAKLME 373


>ref|NP_001141950.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
           gi|223945379|gb|ACN26773.1| unknown [Zea mays]
           gi|414589494|tpg|DAA40065.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 470

 Score =  163 bits (412), Expect(2) = 4e-45
 Identities = 134/328 (40%), Positives = 161/328 (49%), Gaps = 28/328 (8%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLS 263
           MQP+ R+MQ           +AA+  QI+L +L+   G            HDDFLDQML 
Sbjct: 1   MQPTTREMQA----------MAAAGQQISLDDLRAAAGGV----------HDDFLDQMLG 40

Query: 264 GLR-SPWAELGAT---KSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPFDESALLANRL 431
           GL  S W EL +    K+P     +E      +  G G     GL    +D+SALLA+RL
Sbjct: 41  GLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGG----GGL----YDDSALLASRL 92

Query: 432 RQYQISGGSSPVGKAMM-------LPLSHH----GQQQMLATSGD-SGFLPLPLTLGSCG 575
           RQ+QISGG        M       L   HH    G  +  +T G   G L LPL+LGS G
Sbjct: 93  RQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDGGLLLPLSLGSGG 152

Query: 576 S---VDSPNSTVGD-------GLYNG-FSGALQHTESANQHTFPHPQG-APMLGQNFGAA 719
           S   V +    V D       G++ G F+G+L H +   QH   HPQ  AP+ GQ FG  
Sbjct: 153 SGGDVQALLKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQTAPLPGQGFGGG 212

Query: 720 PLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKA 899
             A G                       RQ+VRARRGQATDPHS             MKA
Sbjct: 213 AGASG-----GVSQPQAGAACGGAAAPPRQRVRARRGQATDPHSIAERLRRERIAERMKA 267

Query: 900 LQELVPNANKTDKASMLDEIIDYVKFLQ 983
           LQELVPNANKTDKASMLDEI+DYVKFLQ
Sbjct: 268 LQELVPNANKTDKASMLDEIVDYVKFLQ 295



 Score = 46.6 bits (109), Expect(2) = 4e-45
 Identities = 29/55 (52%), Positives = 30/55 (54%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGGSSDSLTVTEHQVAKLME 1165
            KVLSMSR            DMSSEG+      V  A GS D L VTE QVAKLME
Sbjct: 299  KVLSMSRLGGAAAVAPLVADMSSEGRGG----VAVAAGSDDGLAVTEQQVAKLME 349


>tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 471

 Score =  162 bits (411), Expect(2) = 5e-45
 Identities = 134/329 (40%), Positives = 161/329 (48%), Gaps = 29/329 (8%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLS 263
           MQP+ R+MQ           +AA+  QI+L +L+   G            HDDFLDQML 
Sbjct: 1   MQPTTREMQA----------MAAAGQQISLDDLRAAAGGV----------HDDFLDQMLG 40

Query: 264 GLR-SPWAELGAT---KSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPFDESALLANRL 431
           GL  S W EL +    K+P     +E      +  G G     GL    +D+SALLA+RL
Sbjct: 41  GLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGG----GGL----YDDSALLASRL 92

Query: 432 RQYQISGGSSPVGKAMM-------LPLSHH----GQQQMLATSGD-SGFLPLPLTLGSCG 575
           RQ+QISGG        M       L   HH    G  +  +T G   G L LPL+LGS G
Sbjct: 93  RQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDGGLLLPLSLGSGG 152

Query: 576 S---VDSPNSTVGD-------GLYNG-FSGALQHTESANQHTFPHPQG--APMLGQNFGA 716
           S   V +    V D       G++ G F+G+L H +   QH   HPQ   AP+ GQ FG 
Sbjct: 153 SGGDVQALLKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGG 212

Query: 717 APLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMK 896
              A G                       RQ+VRARRGQATDPHS             MK
Sbjct: 213 GAGASG-----GVSQPQAGAACGGAAAPPRQRVRARRGQATDPHSIAERLRRERIAERMK 267

Query: 897 ALQELVPNANKTDKASMLDEIIDYVKFLQ 983
           ALQELVPNANKTDKASMLDEI+DYVKFLQ
Sbjct: 268 ALQELVPNANKTDKASMLDEIVDYVKFLQ 296



 Score = 46.6 bits (109), Expect(2) = 5e-45
 Identities = 29/55 (52%), Positives = 30/55 (54%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGGSSDSLTVTEHQVAKLME 1165
            KVLSMSR            DMSSEG+      V  A GS D L VTE QVAKLME
Sbjct: 300  KVLSMSRLGGAAAVAPLVADMSSEGRGG----VAVAAGSDDGLAVTEQQVAKLME 350


>ref|XP_006661232.1| PREDICTED: transcription factor UNE12-like, partial [Oryza
            brachyantha]
          Length = 373

 Score =  157 bits (396), Expect(2) = 5e-45
 Identities = 146/327 (44%), Positives = 171/327 (52%), Gaps = 37/327 (11%)
 Frame = +3

Query: 135  LNGIAASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLSGLR-SPWAELGATKSPW 311
            +  +AA++   +L EL+NGH        GG   HDDF DQMLS L  S W +L A     
Sbjct: 1    MQAMAAAAQISSLEELRNGHAGAAANAAGGV--HDDFFDQMLSSLPPSAWPDLAAAAKAA 58

Query: 312  DAPDSEGP-TAAQRIFGVGKEAEDGLPYAPFDESALLANRLRQYQISGGSSPVG------ 470
            +  D+EG     Q+ FG            P+DESA+LA+RLRQ+QISGG    G      
Sbjct: 59   E-DDAEGMHQQQQQQFG-----------GPYDESAMLASRLRQHQISGGGGGGGGGGGRG 106

Query: 471  ---KAMMLPL------SHHGQQQMLATS----GDSGFLPLPLTLGSCGS---------VD 584
               K M+L         HH   Q L  S    G    L LPLTLG+ GS           
Sbjct: 107  AAVKQMVLQQLADLRQGHHMMLQGLGRSPAGAGAGDGLLLPLTLGNGGSGGDVQALLKAA 166

Query: 585  SPNSTVGD--GLYNGFSGALQHTESANQHTFPH-PQGAP-MLGQNFGAAPLAPGLTQXXX 752
            + NS  G   G+Y GF+G+LQ  +  +QH  PH PQ AP M  Q+FG         Q   
Sbjct: 167  AANSAGGGDAGVYGGFAGSLQQQQ--HQHFQPHHPQAAPTMPTQSFGGGGGGTAQPQAXX 224

Query: 753  XXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANK- 929
                             RQ+VRARRGQATDPHS             MKALQELVPNANK 
Sbjct: 225  XXXXXXXXXGGAPAPP-RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKW 283

Query: 930  --TDKASMLDEIIDYVKFLQXXXXXSR 1004
              TDKASMLDEIIDYVKFLQ     S+
Sbjct: 284  LQTDKASMLDEIIDYVKFLQLQVKASK 310



 Score = 52.4 bits (124), Expect(2) = 5e-45
 Identities = 30/54 (55%), Positives = 31/54 (57%)
 Frame = +2

Query: 1004 VLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGGSSDSLTVTEHQVAKLME 1165
            VLSMSR            DMSSEG+  A      A G SDSLTVTE QVAKLME
Sbjct: 317  VLSMSRLGGAAAVAPLVADMSSEGRGGAANGGAPAAGGSDSLTVTEQQVAKLME 370


>ref|XP_006343666.1| PREDICTED: transcription factor bHLH66-like [Solanum tuberosum]
          Length = 444

 Score =  159 bits (403), Expect(2) = 1e-44
 Identities = 121/312 (38%), Positives = 156/312 (50%), Gaps = 38/312 (12%)
 Frame = +3

Query: 162 QIALPELQNGHGSQTPFDHGG-------------SVGHDDFLDQMLSGL--RSPWAELGA 296
           Q++L +LQNG    +    GG             +  HDDFL+Q+LS +   SPW +L  
Sbjct: 15  QMSLQDLQNGGNGGSTGGVGGLGQHNMGNFHFDPTSSHDDFLEQILSSVPSSSPWPDLSK 74

Query: 297 TKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAP------FDE--SALLANRLRQYQISG 452
           +  P     S     +          ED  P  P      +D+  S+LLA++LRQ+QI+G
Sbjct: 75  SWDPHHHLSSPPHNPSS--------GEDQPPSNPLHSQFHYDDQASSLLASKLRQHQITG 126

Query: 453 G-SSPVGKAMMLP--------LSHHGQQQMLATSGDSGFLPLPLTLGSCGS-----VDSP 590
           G ++   KA+ML         L+ +G +     SGD+G L LPL L + G       +  
Sbjct: 127 GGAAAAAKALMLQQQLLLSRTLAGNGLRSPNGASGDNGLLSLPLNLSNNGDQNDGVANPA 186

Query: 591 NSTVGDGLYNGFSGALQHTESANQHTFPHPQGAPMLGQNFGAAPLAPGLTQXXXXXXXXX 770
           N      L+NGF+G+L  T +  QH F HPQG  M  Q+FGA    P + Q         
Sbjct: 187 NDNSVQALFNGFTGSLGQTSNQPQH-FHHPQGGSMQSQSFGA----PAMNQTPAASGSVG 241

Query: 771 XXXXXXXXXXXRQ-KVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASM 947
                      +Q +VRARRGQATDPHS             MKALQELVPNANKTDKASM
Sbjct: 242 GGGGSTPAAQPKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASM 301

Query: 948 LDEIIDYVKFLQ 983
           LDEIIDYVKFLQ
Sbjct: 302 LDEIIDYVKFLQ 313



 Score = 48.5 bits (114), Expect(2) = 1e-44
 Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSA-----GRAVCAAGGSSDSLTVTEHQVAKLME 1165
            KVLSMSR            DMSSEG+        G    A+  +S+++TVTEHQVAKLME
Sbjct: 317  KVLSMSRLGGAAAVAPLVADMSSEGRGEGNVGRGGNGTAASSSNSETMTVTEHQVAKLME 376


>ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
            gi|50253024|dbj|BAD29274.1| bHLH transcription factor
            PTF1-like protein [Oryza sativa Japonica Group]
            gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa
            Japonica Group]
          Length = 499

 Score =  161 bits (408), Expect(2) = 2e-44
 Identities = 140/332 (42%), Positives = 163/332 (49%), Gaps = 45/332 (13%)
 Frame = +3

Query: 147  AASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLSGLR-SPWAELGATKSPWDAPD 323
            AA++ QI+L +L+NG G       GG V HDDFLDQMLS L  S W +L A K+  D  D
Sbjct: 4    AAAAGQISLDDLRNGGGVAANAGGGGGV-HDDFLDQMLSSLPPSAWPDLAAGKAAED--D 60

Query: 324  SEGPT----AAQRIFGVGKEAEDGLPYAPFDESALLANRLRQYQISGGSSPVG------K 473
            +EG        Q+ FG            P+DESA+LA+RLRQ+QISGG    G      K
Sbjct: 61   AEGMHHHHHQQQQQFG-----------GPYDESAMLASRLRQHQISGGGGGGGGGAAAVK 109

Query: 474  AMMLPL------SHHGQQQMLAT---------SGDSGFLPLPLTLGSCGS---------V 581
             M+L         HH   Q L            GD G L LPLTLGS GS          
Sbjct: 110  QMVLQQLADLRQGHHMMLQGLGGRSPAGGGGGGGDGGLL-LPLTLGSGGSGGDVQALLKA 168

Query: 582  DSPNSTVGD---GLYNG-FSGALQHTESANQHTFPHPQGAPMLG-QNFGAAPLAPG--LT 740
             + NS  G    G+Y G F+G+L   +   QH  PHPQ AP +  Q+FG      G    
Sbjct: 169  AAANSAGGGDAGGVYGGGFAGSLHQQQ---QHFQPHPQTAPTIPTQSFGGGGGGGGGGTA 225

Query: 741  QXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPN 920
                                 RQ+VRARRGQATDPHS             MKALQELVPN
Sbjct: 226  SGGGAAQPQAGAAGGGAPAPPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPN 285

Query: 921  ANK---TDKASMLDEIIDYVKFLQXXXXXSRF 1007
            ANK   TDKASMLDEIIDYVKFLQ     S +
Sbjct: 286  ANKLMQTDKASMLDEIIDYVKFLQLQVKASTY 317



 Score = 45.8 bits (107), Expect(2) = 2e-44
 Identities = 32/57 (56%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = +2

Query: 1004 VLSMSRXXXXXXXXXXXXDMSSEGQSSA---GRAVCAAGGSSDSLTVTEHQVAKLME 1165
            VLSMSR            DMSSEG+      G A  AAG  SDSLTVTE QVAKLME
Sbjct: 324  VLSMSRLGGAAAVAPLVADMSSEGRGGGAANGGAPAAAG--SDSLTVTEQQVAKLME 378


>ref|XP_004954215.1| PREDICTED: transcription factor bHLH66-like [Setaria italica]
          Length = 398

 Score =  170 bits (430), Expect(2) = 3e-44
 Identities = 119/263 (45%), Positives = 135/263 (51%), Gaps = 8/263 (3%)
 Frame = +3

Query: 219 GGSVGHDDFLDQMLSGLRSPWAELGATKSPWDAPD--SEGPTAAQRIFGVGKEAEDGLPY 392
           GG  G DDF DQMLS L + W+ELG+ KSPW+ P   SE P A                 
Sbjct: 10  GGGGGQDDFFDQMLSTLPTAWSELGSGKSPWELPAGASEDPAA----------------- 52

Query: 393 APFDESALLANRLRQYQISGGSSPVGKAMMLPLSHHGQQQMLATSGDSGFLPLPLTLGSC 572
             FDESALLA+RLR +QI GG  P+    ML LS          +G +GFLPLPL     
Sbjct: 53  --FDESALLASRLRHHQI-GGDKPI----MLHLSDLHGLAGGEDAGAAGFLPLPLFTDRA 105

Query: 573 -----GSVDSPNSTVGD-GLYNGFSGALQHTESANQHTFPHPQGAPMLGQNFGAAPLAPG 734
                 +  SPN+  G+  LYNGF  A  H  +A     P  QG  M  Q+FG    A G
Sbjct: 106 REDMDAAFKSPNAAGGEQALYNGFGAAGMHGAAAAVQP-PFGQGGSMPAQSFGGGAAAGG 164

Query: 735 LTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELV 914
                                  +Q+VRARRGQATDPHS             MKALQELV
Sbjct: 165 GGSAPTGAPAAGAPSGGGAAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKALQELV 224

Query: 915 PNANKTDKASMLDEIIDYVKFLQ 983
           PNANKTDKASMLDEIIDYVKFLQ
Sbjct: 225 PNANKTDKASMLDEIIDYVKFLQ 247



 Score = 36.6 bits (83), Expect(2) = 3e-44
 Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQ------SSAGRAVCAAGGSS-----DSLTVTEHQ 1147
            KVLSMSR            +MSSEG       S +G    A GG++      SL VTE Q
Sbjct: 251  KVLSMSRLGGAAGVGPLVANMSSEGNGNGNGTSDSGDGNAANGGNNGENGGSSLKVTEQQ 310

Query: 1148 VAKLME 1165
            VA+LME
Sbjct: 311  VARLME 316


>gb|EOY29579.1| LJRHL1-like 1 [Theobroma cacao]
          Length = 469

 Score =  166 bits (421), Expect(2) = 1e-43
 Identities = 140/340 (41%), Positives = 168/340 (49%), Gaps = 40/340 (11%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGS------QTP-FDHGGSVGHDD 242
           MQP +R+MQ       ++N +   + QI L +LQN   S      Q P FD   S  HDD
Sbjct: 1   MQPCSREMQ-------AMNSLLNPTQQIPLQDLQNNGNSNGHQQIQNPQFDPTSS--HDD 51

Query: 243 FLDQMLSGLRS-PWAELGATKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPFDESALL 419
           FL+QMLS L S  W++L   KSPWD P ++    A     VG           F    +L
Sbjct: 52  FLEQMLSTLPSCSWSDL---KSPWDPPKADETGGANLDNNVG-----------FHYDEIL 97

Query: 420 ANRLRQYQISGG--SSPVGKAMMLPLSHHGQQQMLAT----------SGDSGFLPLPLTL 563
           A++LRQ+QI+GG  SSP   AM + +    QQ MLA            G  G L +PL+L
Sbjct: 98  ASKLRQHQINGGGGSSPATAAMKMMMQ---QQMMLAGRAAAAAAAGGGGGGGGLTMPLSL 154

Query: 564 GSCG------------SVDSPNSTVGDG----LYNGFSGALQH--TESANQ-HTFPHPQG 686
           GS              S  SPN   G+G    L+N F     H   +S+NQ   F HPQG
Sbjct: 155 GSSAAGSHQNDVVDGSSFKSPNHQGGEGSVQALFNSFGAGSLHGTNQSSNQPQHFHHPQG 214

Query: 687 APML-GQNFGAAPLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXX 863
             M   QNFGA P    + Q                    +Q+VRARRGQATDPHS    
Sbjct: 215 GTMQQAQNFGA-PAGTVMNQSQAIGSTGGTPAQP------KQRVRARRGQATDPHSIAER 267

Query: 864 XXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 983
                    MKALQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 268 LRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 307



 Score = 38.5 bits (88), Expect(2) = 1e-43
 Identities = 28/67 (41%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAGG------------SSDSLTVTEH 1144
            KVLSMSR            DM SEG     +     G             S+DSLTVTE 
Sbjct: 311  KVLSMSRLGGAAAVAPLVADMPSEGGGDCIQTSANGGSLPRNSNGNQTSSSNDSLTVTEQ 370

Query: 1145 QVAKLME 1165
            QVAKLME
Sbjct: 371  QVAKLME 377


>ref|XP_003533887.2| PREDICTED: transcription factor bHLH66-like [Glycine max]
          Length = 490

 Score =  165 bits (418), Expect(2) = 1e-43
 Identities = 132/337 (39%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPEL--------QNGHGS------------- 200
           MQP +R+MQ        LN +  SS QI+L +L        QN H +             
Sbjct: 1   MQPCSREMQ-------GLNSLLNSSSQISLQDLHNHTTNQIQNSHMNHQHHHQQQQQHQQ 53

Query: 201 -QTPFDHGGSVGHDDFLDQMLSGLRSPWAELGATKSP-WD--APDSEGPTAAQRIFGVGK 368
            Q    H  S  HDDFL+QMLS     W +L   K   WD   P+   P           
Sbjct: 54  QQHQLAHFDSTSHDDFLEQMLSSCS--WTDLNHNKPLLWDPNTPNDIKPPDETTPSNNND 111

Query: 369 EAEDGLPYAPFDESALLANRLRQYQISGGSSPVGKAMMLPLSHHGQQQMLATSGDSGFLP 548
           +A   + +  FDE + LA++ R +QIS  ++P   A    +  H   Q+L    DSG L 
Sbjct: 112 DATANVVFPSFDEHSTLASKFRNHQISPNNAPKNAAAAAFMLQH---QLLR---DSGLLN 165

Query: 549 LPLTLGSCGSVD-----SPN---STVGDGLYNGFSGALQHTESANQHT--FPHPQGA--P 692
           +PL+L     VD     SPN         LYNGF+G+L     ++  T  F +PQG+  P
Sbjct: 166 MPLSLPGNDVVDASSFKSPNPGGEASVQALYNGFAGSLHGAGQSSNQTQHFQNPQGSSNP 225

Query: 693 MLGQNFGAAPLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXX 872
           M GQNFGAAP   G                       RQ+VRARRGQATDPHS       
Sbjct: 226 MQGQNFGAAPAGGG---GATNQAPGSGAAAGGAPAQPRQRVRARRGQATDPHSIAERLRR 282

Query: 873 XXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 983
                 MKALQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 283 ERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 319



 Score = 39.3 bits (90), Expect(2) = 1e-43
 Identities = 31/73 (42%), Positives = 34/73 (46%), Gaps = 18/73 (24%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEG---------QSSAGRA---------VCAAGGSSDS 1126
            KVLSMSR            DM SEG          S+ G A           A   S+DS
Sbjct: 323  KVLSMSRLGGAAAVAPLVADMYSEGGGDCIQANGNSNGGGAHAPNSNTNQTSATTPSNDS 382

Query: 1127 LTVTEHQVAKLME 1165
            LT+TEHQVAKLME
Sbjct: 383  LTMTEHQVAKLME 395


>ref|XP_003546668.1| PREDICTED: transcription factor bHLH82-like [Glycine max]
          Length = 475

 Score =  162 bits (410), Expect(2) = 3e-43
 Identities = 126/326 (38%), Positives = 158/326 (48%), Gaps = 26/326 (7%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGSQTPFDHGG---------SVGH 236
           MQP +++MQ        LN +  SS QI+L +LQN   +Q    H           S  H
Sbjct: 1   MQPCSKEMQ-------GLNSLLNSSSQISLQDLQNHTTNQIQNSHMNHQHQLAHFDSTSH 53

Query: 237 DDFLDQMLSGLRSPWAELGATKSP-WDAP---DSEGPTAAQRIFGVGKEAEDGLPYAPFD 404
           DDFL+QMLS     W +L   K   WD     D + P              +   ++ FD
Sbjct: 54  DDFLEQMLSSCS--WTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASFSSFD 111

Query: 405 ESALLANRLRQYQISGGSSPVGKAMMLPLSHHGQQQMLATSGDSGFLPLPLTLGS----- 569
           E + LA++ R +QIS  ++    A    L    Q Q+L    DSG L +PL+L       
Sbjct: 112 EHSTLASKFRNHQISSNNNAPKNAAAAALML--QHQLLR---DSGLLNMPLSLPGNDVVV 166

Query: 570 -CGSVDSPNSTVGDGL---YNGFSGALQHTESANQHT--FPHPQGA--PMLGQNFGAAPL 725
              + +SPN +    +   YNGF+G+L     ++  T  F HPQG+  PM GQNFGA P 
Sbjct: 167 DASTFESPNPSGKASVQTFYNGFAGSLHGVGQSSNQTQHFQHPQGSSNPMQGQNFGAVPA 226

Query: 726 APGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQ 905
             G                       RQ+VRARRGQATDPHS             MKALQ
Sbjct: 227 GGGSATNQAPASGAAAGGAPAQP---RQRVRARRGQATDPHSIAERLRRERIAERMKALQ 283

Query: 906 ELVPNANKTDKASMLDEIIDYVKFLQ 983
           ELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 284 ELVPNANKTDKASMLDEIIDYVKFLQ 309



 Score = 41.2 bits (95), Expect(2) = 3e-43
 Identities = 32/75 (42%), Positives = 36/75 (48%), Gaps = 20/75 (26%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEG---------QSSAGRA-----------VCAAGGSS 1120
            KVLSMSR            DMSSEG         +S+ G A             A   S+
Sbjct: 313  KVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGKSNGGGAQASTTNTNTNQTTATTTSN 372

Query: 1121 DSLTVTEHQVAKLME 1165
            DSLT+TEHQVAKLME
Sbjct: 373  DSLTMTEHQVAKLME 387


>ref|XP_006453668.1| hypothetical protein CICLE_v10008192mg [Citrus clementina]
           gi|557556894|gb|ESR66908.1| hypothetical protein
           CICLE_v10008192mg [Citrus clementina]
          Length = 469

 Score =  157 bits (397), Expect(2) = 8e-43
 Identities = 127/330 (38%), Positives = 156/330 (47%), Gaps = 30/330 (9%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLS 263
           MQP +   ++QG ++   NG      QI        H S T FD       DDFL+QMLS
Sbjct: 1   MQPCSSSGEMQGISSLLSNGSHEQQSQI--------HQSAT-FD---PTSQDDFLEQMLS 48

Query: 264 GL--------RSPWAELGAT----------KSPWDAPDSEGPTAAQRIFGVGKEAEDGLP 389
            L        +SPW  +             K P D  D   P+  Q         E+ +P
Sbjct: 49  SLPSCSWTDLKSPWGVVDLNPNNNNNNINNKQPRDLSDETAPSTTQ---------ENNVP 99

Query: 390 YA-PFDESALLANRLRQYQISGGSSPVGKAMMLPLSHHGQQQMLATSGDSGFLPLPLTLG 566
               FDES +LA+++RQ+QISG +               QQQ +  +   G + LPL+LG
Sbjct: 100 AGFQFDESMILASKMRQHQISGNTGSGNNNSAAAKFMMQQQQQIMMAAARGGIGLPLSLG 159

Query: 567 SCGSVDSPNSTV------GDG----LYNGFSGALQHTESANQHTFPHPQGAPMLGQNFGA 716
           + G  D  + +       GDG    LYNGF+G+L H  +  QH F H QG  M GQ FGA
Sbjct: 160 NGGDNDIVDVSSFKSQQGGDGSVQALYNGFTGSL-HGSTQPQH-FHHLQGGSMPGQTFGA 217

Query: 717 APLAPGLTQXXXXXXXXXXXXXXXXXXXX-RQKVRARRGQATDPHSXXXXXXXXXXXXXM 893
                  TQ                     +Q+VRARRGQATDPHS             M
Sbjct: 218 PGPVMNQTQAQASGSTGGGGGGGNTPAQQPKQRVRARRGQATDPHSIAERLRRERIAERM 277

Query: 894 KALQELVPNANKTDKASMLDEIIDYVKFLQ 983
           KALQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 278 KALQELVPNANKTDKASMLDEIIDYVKFLQ 307



 Score = 44.7 bits (104), Expect(2) = 8e-43
 Identities = 31/64 (48%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAG---------GSSDSLTVTEHQVA 1153
            KVLSMSR            DMSSEG    G  + A G          ++DSLTVTEHQVA
Sbjct: 311  KVLSMSRLGGAAAVAPLVADMSSEG-GGGGDCIQANGRNPNGAQTTSANDSLTVTEHQVA 369

Query: 1154 KLME 1165
            KLME
Sbjct: 370  KLME 373


>ref|XP_004242577.1| PREDICTED: transcription factor bHLH66-like [Solanum lycopersicum]
          Length = 443

 Score =  161 bits (407), Expect(2) = 8e-43
 Identities = 123/312 (39%), Positives = 156/312 (50%), Gaps = 38/312 (12%)
 Frame = +3

Query: 162 QIALPELQNGHGSQTPFDHGG----SVGH---------DDFLDQMLSGL--RSPWAELGA 296
           QI+L +LQNG    +    GG    S+GH         DDFL+Q+LS +   SPW +L  
Sbjct: 15  QISLQDLQNGGNGGSTGGVGGLSQHSMGHSHFDPTSSHDDFLEQILSSVPSSSPWPDLSK 74

Query: 297 TKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPFDE--------SALLANRLRQYQIS- 449
           +  P     S     +          ED  P  PF          S+LLA++LRQ+QI+ 
Sbjct: 75  SWDPHHHLSSPPHNPSS--------GEDQPPSNPFHSQFHYDDQASSLLASKLRQHQITS 126

Query: 450 -GGSSPVGKAMMLP--------LSHHGQQQMLATSGDSGFLPLPLTLGSCGSVDSPNSTV 602
            GG++   KA+ML         L+ +G +     SGD+G L LPL L +    D   +  
Sbjct: 127 GGGAAAAAKALMLQQQLLLSRTLAGNGLRSPNGASGDNGLLSLPLNLSNGDQNDGVANPT 186

Query: 603 GDG----LYNGFSGALQHTESANQHTFPHPQGAPMLGQNFGAAPLAPGLTQXXXXXXXXX 770
            D     L+NGF+G+L  T +  QH F HPQG  M  Q+FGA    P + Q         
Sbjct: 187 NDNSVQALFNGFTGSLGQTSNQPQH-FHHPQGGSMQSQSFGA----PAMNQTPAASGSAG 241

Query: 771 XXXXXXXXXXXRQ-KVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASM 947
                      +Q +VRARRGQATDPHS             +KALQELVPNANKTDKASM
Sbjct: 242 GGGGSTPAAQPKQQRVRARRGQATDPHSIAERLRRERIAERLKALQELVPNANKTDKASM 301

Query: 948 LDEIIDYVKFLQ 983
           LDEIIDYVKFLQ
Sbjct: 302 LDEIIDYVKFLQ 313



 Score = 40.8 bits (94), Expect(2) = 8e-43
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSA-----GRAVCAAGGSSDSLTVTEHQVAKLME 1165
            KVLSMSR            DMSSEG+        G    ++  +++++TVTEHQVAKLME
Sbjct: 317  KVLSMSRLGGAPLVA----DMSSEGRGEGNVGRGGNGRASSSSNNETMTVTEHQVAKLME 372


>ref|XP_006473971.1| PREDICTED: transcription factor bHLH66-like [Citrus sinensis]
          Length = 469

 Score =  157 bits (397), Expect(2) = 1e-42
 Identities = 131/336 (38%), Positives = 160/336 (47%), Gaps = 36/336 (10%)
 Frame = +3

Query: 84  MQPSARDMQVQGKTAASLNGIAASSDQIALPELQNGHGSQTPFDHGGSVGHDDFLDQMLS 263
           MQP +   ++QG ++   NG      QI        H S T FD       DDFL+QMLS
Sbjct: 1   MQPCSSGGEMQGISSLLSNGSHEQQSQI--------HQSAT-FD---PTSQDDFLEQMLS 48

Query: 264 GL--------RSPWAELGAT----------KSPWDAPDSEGPTAAQRIFGVGKEAEDGLP 389
            L        +SPW  +             K P D  D   P+  Q         E+ +P
Sbjct: 49  SLPSCSWTDLKSPWGVVDLNPNNNNNNINNKQPRDLSDETAPSTTQ---------ENNVP 99

Query: 390 YA-PFDESALLANRLRQYQISGGS------SPVGKAMMLPLSHHGQQQMLATSGDSGFLP 548
               FDES +LA+++RQ+QISG +      S   K MM       QQQ +  +   G + 
Sbjct: 100 AGFQFDESMILASKMRQHQISGNTGSGNNNSAAAKFMM-----QQQQQQIMMAAARGGIG 154

Query: 549 LPLTLGSCGSVDSPNSTV------GDG----LYNGFSGALQHTESANQHTFPHPQGAPML 698
           LPL+LG+ G  D  + +       GDG    LYNGF+G+L H  +  QH F H QG  M 
Sbjct: 155 LPLSLGNGGDNDIVDVSSFKSQQGGDGSVQALYNGFTGSL-HGSTQPQH-FHHLQGGSMP 212

Query: 699 GQNFGAAPLAPGLTQXXXXXXXXXXXXXXXXXXXX-RQKVRARRGQATDPHSXXXXXXXX 875
           GQ FGA       TQ                     +Q+VRARRGQATDPHS        
Sbjct: 213 GQTFGAPGPVMNQTQAQASGSTGGGGGGGNTPAQQPKQRVRARRGQATDPHSIAERLRRE 272

Query: 876 XXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 983
                MKALQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 273 RIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 308



 Score = 44.3 bits (103), Expect(2) = 1e-42
 Identities = 31/64 (48%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVCAAG---------GSSDSLTVTEHQVA 1153
            KVLSMSR            DMSSEG    G  + A G          ++DSLTVTEHQVA
Sbjct: 312  KVLSMSRLGGAAAVAPLVADMSSEG--GGGDCIQANGRNPNGAQTTSANDSLTVTEHQVA 369

Query: 1154 KLME 1165
            KLME
Sbjct: 370  KLME 373


>ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
           gi|241932808|gb|EES05953.1| hypothetical protein
           SORBIDRAFT_04g035890 [Sorghum bicolor]
          Length = 393

 Score =  166 bits (421), Expect(2) = 2e-42
 Identities = 116/262 (44%), Positives = 135/262 (51%), Gaps = 8/262 (3%)
 Frame = +3

Query: 222 GSVGHDDFLDQMLSGLRSPWAELGATKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAPF 401
           G  G DDF DQMLS L + W++LG+ KSPW+ P            G G   ED    A +
Sbjct: 10  GGGGQDDFFDQMLSTLPAAWSDLGSGKSPWELPA-----------GAGAVPEDA---AAY 55

Query: 402 DESALLANRLRQYQISGGSSPVG-KAMMLPLSHHGQQQMLATSGDSGFLPLPLTLGSC-- 572
           DE+ALLA+RLR +QI GG +  G K +ML LS            D+GF+PLPL       
Sbjct: 56  DEAALLASRLRHHQIGGGGAGAGEKPLMLHLSDLHGLGGGGAGDDAGFMPLPLFTDRARD 115

Query: 573 ---GSVDSPNSTVGD-GLYNGFSGALQHTESANQHTFPHPQGAPM-LGQNFGAAPLAPGL 737
               +  SPN+T  D  LYNGF  A  H   A  H  P  QG  M   Q+FG    A G 
Sbjct: 116 DMDAAFKSPNATGADQALYNGFGAAGMH---AAVHQPPFGQGGSMPAAQSFGGGAAAAG- 171

Query: 738 TQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQELVP 917
                                 +Q+ RA+RGQATDPHS             MKALQELVP
Sbjct: 172 --GAPAPAAGAASAGGGAAPPRQQRQRAKRGQATDPHSIAERLRRERIAERMKALQELVP 229

Query: 918 NANKTDKASMLDEIIDYVKFLQ 983
           NANKTDKASMLDEIIDYVKFLQ
Sbjct: 230 NANKTDKASMLDEIIDYVKFLQ 251



 Score = 33.9 bits (76), Expect(2) = 2e-42
 Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQ------SSAGRAVCAAG-GSSDSLTVTEHQVAKL 1159
            KVLSMSR             M+SEG       S +G    A G     SL VTE QVA+L
Sbjct: 255  KVLSMSRLGGATAVGPLVASMASEGNGNGNGTSDSGNGNAANGENGGGSLQVTEQQVARL 314

Query: 1160 ME 1165
            ME
Sbjct: 315  ME 316


>ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
           gi|223537200|gb|EEF38832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score =  158 bits (399), Expect(2) = 5e-42
 Identities = 135/334 (40%), Positives = 159/334 (47%), Gaps = 34/334 (10%)
 Frame = +3

Query: 84  MQPSARDMQ-VQGKTAASLNGIAASSDQIAL---------PELQNGHGSQTPFDHGGSVG 233
           MQP +R+MQ +      S      S+ QI +          +LQN       FD   S  
Sbjct: 1   MQPCSREMQGINTLLNQSSTATTTSTSQIPIHHNHHHHHHQDLQNQQIQNPHFDPSPS-S 59

Query: 234 HDDFLDQMLSGLRS-PWAELGATKSPWDAPDSEGPTAAQRIFGVGKEAEDGLP------- 389
           +DDFL+QMLS L S  WA+L   KSPWD   +      +    +  E    LP       
Sbjct: 60  NDDFLEQMLSTLPSCSWADL---KSPWDLTTTANLNLPKPR-DLSDETPPSLPDSNNNVG 115

Query: 390 YAPFDESALLANRLRQYQISGGS-----SPVGKAMMLPLSHHGQQQMLATSGDSGFLPLP 554
           +  FDES LLA++LRQ+QISGG      SP   A    L    QQQ++  +   G L   
Sbjct: 116 FHNFDESVLLASKLRQHQISGGGGGGGPSPAAAAAAAKLML--QQQLMMAAAARGGLGQN 173

Query: 555 LTLGSCGSVDSPNSTVGDGLYNGFSGALQHT--ESANQHTFPHPQG--APMLGQNFGAA- 719
             L    S +        GLYNGF     H   +S+NQH F HPQG  A M  QNFG+  
Sbjct: 174 DVLDGFKSPNQGGDGSVQGLYNGFGTGSMHGTGQSSNQH-FHHPQGGAAAMQAQNFGSPG 232

Query: 720 ------PLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXX 881
                 P A G T                     RQ+VRARRGQATDPHS          
Sbjct: 233 GAMMNQPQASGST--------------GGAPAQPRQRVRARRGQATDPHSIAERLRRERI 278

Query: 882 XXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 983
              MKALQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 279 AERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 312



 Score = 41.2 bits (95), Expect(2) = 5e-42
 Identities = 32/71 (45%), Positives = 35/71 (49%), Gaps = 16/71 (22%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSAGRAVC--AAGG--------------SSDSLT 1132
            KVLSMSR            D+SSEG     +A    AAG               S+DSLT
Sbjct: 316  KVLSMSRLGGAAAVAPLVADISSEGGGDCIQANANGAAGNGSLPRANNSSQTPSSNDSLT 375

Query: 1133 VTEHQVAKLME 1165
            VTEHQVAKLME
Sbjct: 376  VTEHQVAKLME 386


>ref|NP_001151181.1| LOC100284814 [Zea mays] gi|195644858|gb|ACG41897.1| BHLH
           transcription factor [Zea mays]
          Length = 390

 Score =  163 bits (413), Expect(2) = 5e-42
 Identities = 117/265 (44%), Positives = 135/265 (50%), Gaps = 10/265 (3%)
 Frame = +3

Query: 219 GGSVGHDDFLDQMLSGLRSPWAELGATKSPWDAPDSEGPTAAQRIFGVGKEAEDGLPYAP 398
           GG    DDF DQMLS L + W++LG+ KSPW+ P + G              ED    A 
Sbjct: 10  GGGGAQDDFFDQMLSTLPAAWSDLGSGKSPWELPAAAGAVT-----------EDA---AA 55

Query: 399 FDESALLANRLRQYQISGGSSPVGKAMMLPLSH-HGQQQMLATSGDSGFLPLPLTLGSCG 575
            DE ALLA+RLR +QI GG  P    +ML LS  HG         D+GF+PLPL      
Sbjct: 56  LDEPALLASRLRHHQIGGGEKP----LMLHLSDLHGLGAGAGAGDDAGFMPLPLFTQHLA 111

Query: 576 SVD------SPNSTVGDG-LYNGFSGA-LQHTESANQHTFPHPQGAPM-LGQNFGAAPLA 728
             D      SPN+  GD  LYNGF  A   HT + +Q   P  QG  M   Q+FG    A
Sbjct: 112 RDDVDAAFKSPNAAGGDRELYNGFGAAGNMHTAAVHQPP-PFGQGGSMPAAQSFGGGGPA 170

Query: 729 PGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARRGQATDPHSXXXXXXXXXXXXXMKALQE 908
           P                        +Q+ RA+RGQATDPHS             MKALQE
Sbjct: 171 PAA-----------GAASGGGAPPRQQRQRAKRGQATDPHSIAERLRRERIAERMKALQE 219

Query: 909 LVPNANKTDKASMLDEIIDYVKFLQ 983
           LVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 220 LVPNANKTDKASMLDEIIDYVKFLQ 244



 Score = 35.8 bits (81), Expect(2) = 5e-42
 Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEGQSSA--------GRAVCAAGGSSDSLTVTEHQVAK 1156
            KVLSMSR             ++SEG  S         G A     G   SL VTE QVA+
Sbjct: 248  KVLSMSRLGGATAVGTLVAGIASEGNGSGDGTSDSGKGNAANGENGGGGSLQVTEQQVAR 307

Query: 1157 LME 1165
            LME
Sbjct: 308  LME 310


>ref|XP_004287121.1| PREDICTED: transcription factor bHLH66-like [Fragaria vesca subsp.
           vesca]
          Length = 459

 Score =  155 bits (392), Expect(2) = 7e-42
 Identities = 119/292 (40%), Positives = 143/292 (48%), Gaps = 32/292 (10%)
 Frame = +3

Query: 204 TPFDHGGSVGHDDFLDQMLSGLRSP-----WAELGATKSPWDAPDSEGPTAAQRIFGVGK 368
           TPFD      HDDFL+QMLS L +P     WA+      P   P S    +   +F    
Sbjct: 40  TPFDSS----HDDFLEQMLSTLGNPSSCSSWADETPPLPP--PPHSSNDNSNNVVFS--- 90

Query: 369 EAEDGLPYAPFDESALLANRLRQYQISGGSSPVGK---------AMMLPLSHHGQQQMLA 521
                     +D+S+ LA++ R +QIS G++   K         A  + L H  Q  M  
Sbjct: 91  ----------YDDSSNLASKFRSHQISAGAAAASKSSPNASAAAAAAMMLQH--QLMMSR 138

Query: 522 TSGDSGFLPLPLTLGSCGSVD------------SPNSTVGDG------LYNGFSGALQHT 647
            S DSG+ P+ L LGS G  D            SPN   GDG      L+NGF+G+L   
Sbjct: 139 GSSDSGYAPMGLALGSNGEFDRSHNDVDGSSFKSPNQGGGDGGSSVQALFNGFTGSLSPN 198

Query: 648 ESANQHTFPHPQGAPMLGQNFGAAPLAPGLTQXXXXXXXXXXXXXXXXXXXXRQKVRARR 827
           +   QH F HPQG  +  QN+GA   A G+TQ                    R +VRARR
Sbjct: 199 QP--QH-FHHPQGGALQAQNYGAQ--AQGMTQPPASGSAGATAAQP------RPRVRARR 247

Query: 828 GQATDPHSXXXXXXXXXXXXXMKALQELVPNANKTDKASMLDEIIDYVKFLQ 983
           GQATDPHS             MKALQELVPNANKTDKASMLDEIIDYVKFLQ
Sbjct: 248 GQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 299



 Score = 43.5 bits (101), Expect(2) = 7e-42
 Identities = 33/65 (50%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
 Frame = +2

Query: 1001 KVLSMSRXXXXXXXXXXXXDMSSEG-----QSSA-----GRAVCAAGGSSDSLTVTEHQV 1150
            KVLSMSR            DMSSEG     Q+S      GR+   A  S+DS+TVTEHQV
Sbjct: 303  KVLSMSRLGGAGAVAPLVADMSSEGGGDCIQTSGNGGTRGRSNQTAS-SNDSMTVTEHQV 361

Query: 1151 AKLME 1165
            AKLME
Sbjct: 362  AKLME 366