BLASTX nr result
ID: Zingiber25_contig00019667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00019667
(540 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002443248.1| hypothetical protein SORBIDRAFT_08g016307 [S... 104 1e-20
ref|XP_004962914.1| PREDICTED: histone deacetylase 6-like isofor... 103 3e-20
ref|NP_001141476.1| histone deacetylase 6 [Zea mays] gi|19470472... 102 6e-20
ref|XP_003575491.1| PREDICTED: histone deacetylase 6-like [Brach... 100 2e-19
ref|NP_001176971.1| Os12g0508266 [Oryza sativa Japonica Group] g... 99 6e-19
ref|XP_006664055.1| PREDICTED: histone deacetylase 6-like [Oryza... 99 8e-19
gb|EEC69353.1| hypothetical protein OsI_38470 [Oryza sativa Indi... 96 4e-18
ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ... 91 2e-16
gb|EMJ03076.1| hypothetical protein PRUPE_ppa013008mg [Prunus pe... 89 5e-16
ref|XP_004289794.1| PREDICTED: histone deacetylase 6-like [Fraga... 88 1e-15
ref|XP_004152271.1| PREDICTED: histone deacetylase 6-like [Cucum... 88 1e-15
gb|EXC56009.1| Histone deacetylase 6 [Morus notabilis] 87 3e-15
gb|EXB76677.1| Histone deacetylase 6 [Morus notabilis] 87 3e-15
ref|XP_002313903.1| hypothetical protein POPTR_0009s09330g [Popu... 86 4e-15
gb|EOX98443.1| Regulator of Vps4 activity in the MVB pathway pro... 86 7e-15
emb|CBI22472.3| unnamed protein product [Vitis vinifera] 84 3e-14
ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis... 84 3e-14
ref|XP_006409631.1| hypothetical protein EUTSA_v10022899mg [Eutr... 83 5e-14
ref|XP_006298760.1| hypothetical protein CARUB_v10014863mg [Caps... 82 6e-14
dbj|BAD44405.1| unnamed protein product [Arabidopsis thaliana] 82 6e-14
>ref|XP_002443248.1| hypothetical protein SORBIDRAFT_08g016307 [Sorghum bicolor]
gi|241943941|gb|EES17086.1| hypothetical protein
SORBIDRAFT_08g016307 [Sorghum bicolor]
Length = 148
Score = 104 bits (260), Expect = 1e-20
Identities = 47/55 (85%), Positives = 52/55 (94%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
ETGHCLALSFSDLSVWCF+CD+YLDVQ I +LRPVYEVAHLLKFGERP FR+LE+
Sbjct: 80 ETGHCLALSFSDLSVWCFSCDSYLDVQAILELRPVYEVAHLLKFGERPPFRSLEV 134
>ref|XP_004962914.1| PREDICTED: histone deacetylase 6-like isoform X1 [Setaria italica]
Length = 182
Score = 103 bits (257), Expect = 3e-20
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
ETGHCLALSFSDLSVWCF CD+YLDVQ I +LRPVYEVAHLLKFGERP FR+LE+
Sbjct: 113 ETGHCLALSFSDLSVWCFACDSYLDVQAILELRPVYEVAHLLKFGERPPFRSLEV 167
>ref|NP_001141476.1| histone deacetylase 6 [Zea mays] gi|194704728|gb|ACF86448.1|
unknown [Zea mays] gi|195621352|gb|ACG32506.1| histone
deacetylase 6 [Zea mays] gi|223947619|gb|ACN27893.1|
unknown [Zea mays] gi|414878244|tpg|DAA55375.1| TPA:
histone deacetylase 6 [Zea mays]
Length = 185
Score = 102 bits (254), Expect = 6e-20
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
ETGHCLALSFSDLSVWCF+CD+YLDVQ I +LRPVYEVAHLLKFG+RP FR+L++
Sbjct: 117 ETGHCLALSFSDLSVWCFSCDSYLDVQAILELRPVYEVAHLLKFGQRPPFRSLDV 171
>ref|XP_003575491.1| PREDICTED: histone deacetylase 6-like [Brachypodium distachyon]
Length = 188
Score = 100 bits (249), Expect = 2e-19
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
E GHC+ALSFSDLSVWCF CD+YLD Q I +LRPVYEVAHLLKFGERP FRTLE+
Sbjct: 119 EMGHCIALSFSDLSVWCFACDSYLDAQSILELRPVYEVAHLLKFGERPPFRTLEV 173
>ref|NP_001176971.1| Os12g0508266 [Oryza sativa Japonica Group]
gi|222617152|gb|EEE53284.1| hypothetical protein
OsJ_36238 [Oryza sativa Japonica Group]
gi|255670335|dbj|BAH95699.1| Os12g0508266 [Oryza sativa
Japonica Group]
Length = 187
Score = 99.0 bits (245), Expect = 6e-19
Identities = 42/55 (76%), Positives = 51/55 (92%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
+TGHCLALSFSDLS+WCF CD+YLDVQ I +LRPVYEVAHL+KFG+RP FR+L++
Sbjct: 118 DTGHCLALSFSDLSIWCFACDSYLDVQSILELRPVYEVAHLMKFGQRPPFRSLDV 172
>ref|XP_006664055.1| PREDICTED: histone deacetylase 6-like [Oryza brachyantha]
Length = 180
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
+TGHCLALSFSDLSVWCF CD+YLDVQ I +LRPVYEV HLLKFG+RP FR+L++
Sbjct: 111 DTGHCLALSFSDLSVWCFACDSYLDVQSILELRPVYEVVHLLKFGQRPPFRSLDV 165
>gb|EEC69353.1| hypothetical protein OsI_38470 [Oryza sativa Indica Group]
Length = 187
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
+TGHCLALSFSDLSVWCF CD+YLDVQ I +LRPVYEVAHL+KF +RP FR+L++
Sbjct: 118 DTGHCLALSFSDLSVWCFACDSYLDVQSILELRPVYEVAHLMKFRQRPPFRSLDV 172
>ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis]
gi|223533136|gb|EEF34894.1| histone deacetylase hda2,
putative [Ricinus communis]
Length = 159
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/55 (70%), Positives = 47/55 (85%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLEM 375
+T HC+ALS+SDLSVWCF CDAYLD Q+I QLRPVYE A++LKFGE P FR +E+
Sbjct: 96 QTHHCVALSYSDLSVWCFACDAYLDAQVIMQLRPVYETAYILKFGEAPPFRAVEL 150
>gb|EMJ03076.1| hypothetical protein PRUPE_ppa013008mg [Prunus persica]
Length = 144
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTL 381
+T HCLALS+SDLSVWCF+CDAYLD Q+I QLR VYE A++LKFGE P FRT+
Sbjct: 92 QTNHCLALSYSDLSVWCFSCDAYLDAQVIPQLRGVYETAYILKFGEAPPFRTV 144
>ref|XP_004289794.1| PREDICTED: histone deacetylase 6-like [Fragaria vesca subsp. vesca]
Length = 146
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = -2
Query: 530 HCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRT 384
HCLALS+SDLSVWCF+CDAYLD Q+I QLRPVYE A+LLKFGE P RT
Sbjct: 97 HCLALSYSDLSVWCFSCDAYLDAQLIPQLRPVYETAYLLKFGEAPPVRT 145
>ref|XP_004152271.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
gi|449484341|ref|XP_004156856.1| PREDICTED: histone
deacetylase 6-like [Cucumis sativus]
Length = 146
Score = 87.8 bits (216), Expect = 1e-15
Identities = 37/51 (72%), Positives = 47/51 (92%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFR 387
++ HCLALS+SDLSVWCF+CDAYLD Q+I++LRPV+EVA++LKFGE P FR
Sbjct: 96 QSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR 146
>gb|EXC56009.1| Histone deacetylase 6 [Morus notabilis]
Length = 145
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = -2
Query: 536 TGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTL 381
T H LALS+SDLSVWCF+CDAYLD Q+IRQLRPVYE A+LLKFGE P R +
Sbjct: 94 TSHSLALSYSDLSVWCFSCDAYLDAQVIRQLRPVYETAYLLKFGEAPPSRAV 145
>gb|EXB76677.1| Histone deacetylase 6 [Morus notabilis]
Length = 145
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = -2
Query: 536 TGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTL 381
T H LALS+SDLSVWCF+CDAYLD Q+IRQLRPVYE A+LLKFGE P R +
Sbjct: 94 TSHSLALSYSDLSVWCFSCDAYLDAQVIRQLRPVYETAYLLKFGEAPPSRAV 145
>ref|XP_002313903.1| hypothetical protein POPTR_0009s09330g [Populus trichocarpa]
gi|118483848|gb|ABK93815.1| unknown [Populus
trichocarpa] gi|222850311|gb|EEE87858.1| hypothetical
protein POPTR_0009s09330g [Populus trichocarpa]
Length = 160
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/54 (66%), Positives = 46/54 (85%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLE 378
+T HCLALS+SDLS+WCF CD+YLD ++I QL+PV E AH+LKFGE P FR++E
Sbjct: 92 QTSHCLALSYSDLSIWCFACDSYLDARVIIQLKPVSETAHILKFGEAPPFRSVE 145
>gb|EOX98443.1| Regulator of Vps4 activity in the MVB pathway protein [Theobroma
cacao]
Length = 162
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLE 378
+T HC+ALS+SDLSVWCF CD YLD Q+IRQLRPV+E A++LKFGE P R+ E
Sbjct: 93 QTTHCIALSYSDLSVWCFACDTYLDAQVIRQLRPVHETAYILKFGEAPPHRSEE 146
>emb|CBI22472.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLE 378
+ HCLALS+SDLS+WCF+CDAYLD Q I QL PVYE A++LKFG+ P F T +
Sbjct: 90 KVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPFPTTD 143
>ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
Length = 154
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERPSFRTLE 378
+ HCLALS+SDLS+WCF+CDAYLD Q I QL PVYE A++LKFG+ P F T +
Sbjct: 91 KVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPFPTTD 144
>ref|XP_006409631.1| hypothetical protein EUTSA_v10022899mg [Eutrema salsugineum]
gi|557110793|gb|ESQ51084.1| hypothetical protein
EUTSA_v10022899mg [Eutrema salsugineum]
Length = 144
Score = 82.8 bits (203), Expect = 5e-14
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERP 396
+TGHCLALS+SDLSVWCF C+AYLD Q+I QLRPV++ A++LKFGE P
Sbjct: 92 QTGHCLALSYSDLSVWCFCCEAYLDAQIILQLRPVHQAAYILKFGEAP 139
>ref|XP_006298760.1| hypothetical protein CARUB_v10014863mg [Capsella rubella]
gi|482567469|gb|EOA31658.1| hypothetical protein
CARUB_v10014863mg [Capsella rubella]
Length = 144
Score = 82.4 bits (202), Expect = 6e-14
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERP 396
+TGHCLALS+SDLSVWCF C+AYLD Q+I QLRP+++ A++LKFGE P
Sbjct: 92 QTGHCLALSYSDLSVWCFCCEAYLDAQIILQLRPIHQAAYILKFGESP 139
>dbj|BAD44405.1| unnamed protein product [Arabidopsis thaliana]
Length = 146
Score = 82.4 bits (202), Expect = 6e-14
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = -2
Query: 539 ETGHCLALSFSDLSVWCFNCDAYLDVQMIRQLRPVYEVAHLLKFGERP 396
+TGHCLALS+SDLSVWCF C+AYLD Q+I QLRP+++ A++LKFGE P
Sbjct: 94 QTGHCLALSYSDLSVWCFCCEAYLDAQIILQLRPIHQAAYILKFGEAP 141