BLASTX nr result
ID: Zingiber25_contig00019462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00019462
(1196 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048616.1| Os02g0831100 [Oryza sativa Japonica Group] g... 92 4e-16
sp|Q6K977.2|C3H19_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 92 4e-16
ref|XP_006648173.1| PREDICTED: zinc finger CCCH domain-containin... 90 2e-15
gb|EAY88122.1| hypothetical protein OsI_09558 [Oryza sativa Indi... 88 6e-15
ref|XP_006470901.1| PREDICTED: zinc finger CCCH domain-containin... 85 5e-14
gb|AEV40984.1| zinc finger C-x8-C-x5-C-x3-H type family protein ... 84 9e-14
gb|EOY01159.1| CCCH-type zinc finger family protein, putative [T... 83 2e-13
gb|EMT21128.1| Zinc finger CCCH domain-containing protein 32 [Ae... 83 3e-13
ref|XP_006420674.1| hypothetical protein CICLE_v10004417mg [Citr... 82 3e-13
gb|AEV41035.1| zinc finger C-x8-C-x5-C-x3-H type family protein ... 82 4e-13
ref|XP_002312505.2| zinc finger family protein [Populus trichoca... 82 6e-13
ref|XP_004236893.1| PREDICTED: zinc finger CCCH domain-containin... 82 6e-13
ref|NP_001054221.1| Os04g0671800 [Oryza sativa Japonica Group] g... 80 1e-12
gb|EMS54397.1| Zinc finger CCCH domain-containing protein 32 [Tr... 80 2e-12
emb|CAH67704.1| H0624F09.12 [Oryza sativa Indica Group] gi|12555... 80 2e-12
gb|EXB97153.1| Zinc finger CCCH domain-containing protein 17 [Mo... 80 2e-12
gb|AEV41082.1| zinc finger C-x8-C-x5-C-x3-H type family protein ... 80 2e-12
gb|AEV41128.1| zinc finger C-x8-C-x5-C-x3-H type family protein ... 79 5e-12
gb|ADX60253.1| C3H-related transcription factor [Oryza sativa Ja... 79 5e-12
ref|XP_004954519.1| PREDICTED: zinc finger CCCH domain-containin... 78 8e-12
>ref|NP_001048616.1| Os02g0831100 [Oryza sativa Japonica Group]
gi|48716392|dbj|BAD23001.1| unknown protein [Oryza sativa
Japonica Group] gi|113538147|dbj|BAF10530.1| Os02g0831100
[Oryza sativa Japonica Group]
Length = 362
Score = 92.0 bits (227), Expect = 4e-16
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 9/276 (3%)
Frame = -3
Query: 1191 SSRLQGRIAFPGRSS--DLASNLLLEMGRRPQSRLSPVRRTGYQTRNPERAWSQPSEELN 1018
SSRL+GRI P ++ L E R P++RLSP +T + + +R ++P+E+++
Sbjct: 92 SSRLRGRIRLPAETTFDRLGLQPEKERDRGPRARLSPPSQTDLRGKLHDRLKAKPNEDVS 151
Query: 1017 KDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIKVEG 838
+ + +K + SL+FA PKSL+EL+ K+ + +S +LT + ++
Sbjct: 152 GNVQSSLSKAN--EDAESLNFAGPKSLAELKAKKVAG--SLMKSSRSLTGPVRMTSEIVT 207
Query: 837 VRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLEAKK 658
+++S +P+ F+GP PL+AIL+RKR+ A+ + G SGGD +++ R
Sbjct: 208 IKDSSDPVLFDGPKPLNAILKRKRE-ADSGNATDFGSKREEHSGGDEEGSQNDFRNIEDD 266
Query: 657 ECNFTISSHEAGVIPSEDELAYKDAIEAEDGIFXXXXXXXXEDCDKQDGDFHYESGEYKV 478
+ ED++ Y D++ D I + ++Q E +Y++
Sbjct: 267 IVGMNTEGNGEEAFQPEDDVVYGDSLSPADDIAAEAADDASRELEEQQDVETAEEYDYEM 326
Query: 477 DDENTI-------HSXXXXXXXXXXDFARKISVMLS 391
DD N + DFARK+ VM++
Sbjct: 327 DDVNAAEENDYQEYEDEDDDLEDDDDFARKVGVMIT 362
>sp|Q6K977.2|C3H19_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 19;
Short=OsC3H19 gi|125584263|gb|EAZ25194.1| hypothetical
protein OsJ_08993 [Oryza sativa Japonica Group]
Length = 647
Score = 92.0 bits (227), Expect = 4e-16
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 9/276 (3%)
Frame = -3
Query: 1191 SSRLQGRIAFPGRSS--DLASNLLLEMGRRPQSRLSPVRRTGYQTRNPERAWSQPSEELN 1018
SSRL+GRI P ++ L E R P++RLSP +T + + +R ++P+E+++
Sbjct: 377 SSRLRGRIRLPAETTFDRLGLQPEKERDRGPRARLSPPSQTDLRGKLHDRLKAKPNEDVS 436
Query: 1017 KDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIKVEG 838
+ + +K + SL+FA PKSL+EL+ K+ + +S +LT + ++
Sbjct: 437 GNVQSSLSKAN--EDAESLNFAGPKSLAELKAKKVAG--SLMKSSRSLTGPVRMTSEIVT 492
Query: 837 VRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLEAKK 658
+++S +P+ F+GP PL+AIL+RKR+ A+ + G SGGD +++ R
Sbjct: 493 IKDSSDPVLFDGPKPLNAILKRKRE-ADSGNATDFGSKREEHSGGDEEGSQNDFRNIEDD 551
Query: 657 ECNFTISSHEAGVIPSEDELAYKDAIEAEDGIFXXXXXXXXEDCDKQDGDFHYESGEYKV 478
+ ED++ Y D++ D I + ++Q E +Y++
Sbjct: 552 IVGMNTEGNGEEAFQPEDDVVYGDSLSPADDIAAEAADDASRELEEQQDVETAEEYDYEM 611
Query: 477 DDENTI-------HSXXXXXXXXXXDFARKISVMLS 391
DD N + DFARK+ VM++
Sbjct: 612 DDVNAAEENDYQEYEDEDDDLEDDDDFARKVGVMIT 647
>ref|XP_006648173.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Oryza
brachyantha]
Length = 646
Score = 89.7 bits (221), Expect = 2e-15
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Frame = -3
Query: 1191 SSRLQGRIAFPGRSS--DLASNLLLEMGRRPQSRLSPVRRTGYQTRNPERAWSQPSEELN 1018
SSRL+GRI P +S L E R P++R P +T + + +R ++P+E+++
Sbjct: 376 SSRLKGRIKLPAETSFDRLGLQPEKERERGPRARSPPPNQTDLRGKLHDRLKARPNEDVS 435
Query: 1017 KDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNI---HDINATSFNLTVNKVESIK 847
+ + K + +SL+FA PKSL+EL+ K+ H + + ++ S +
Sbjct: 436 ANVKSSLAKANSGEDADSLNFAGPKSLAELKAKKVVGSTGGHSVKSAGSLAGPVRMTS-E 494
Query: 846 VEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLE 667
+ V+ES + + F+GP PL AIL+RKR+ A+ + +G + GD E
Sbjct: 495 IVAVKESSDLVPFDGPKPLDAILKRKRE-ADPRNATDSGNRLEEHTIGD----EGSQFQN 549
Query: 666 AKKECNFTISSHEAGVIPSEDELAYKDAIEAEDGIFXXXXXXXXEDCDKQDG-----DFH 502
+++ T + ++D+L Y D++ D I ++ ++Q ++
Sbjct: 550 NEEDIVGTNTEGNEEAYQADDDLVYGDSMSPADDIAAETADDARKELEEQQNTEPAEEYD 609
Query: 501 YESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
YE + +DEN DFARK+ VM+S
Sbjct: 610 YEMDDVNAEDENDYQEYEDDDLEDDDDFARKVGVMIS 646
>gb|EAY88122.1| hypothetical protein OsI_09558 [Oryza sativa Indica Group]
Length = 405
Score = 88.2 bits (217), Expect = 6e-15
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 9/276 (3%)
Frame = -3
Query: 1191 SSRLQGRIAFPGRSS--DLASNLLLEMGRRPQSRLSPVRRTGYQTRNPERAWSQPSEELN 1018
SSRL+GRI P ++ L E R P++RLS +T + + +R ++P+E+++
Sbjct: 135 SSRLRGRIRLPAETTFDRLGLQPEKERDRGPRARLSLPSQTDLRGKLHDRLKAKPNEDVS 194
Query: 1017 KDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIKVEG 838
+ + +K + SL+FA PKSL+EL+ K+ + +S +LT + ++
Sbjct: 195 GNVQSSLSKAN--EDAESLNFAGPKSLAELKAKKVAG--SLMKSSRSLTGPVRMTSEIVT 250
Query: 837 VRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLEAKK 658
+++S +P+ F+GP PL+AIL+RKR+ A+ + G SGGD +++ R
Sbjct: 251 IKDSSDPVLFDGPKPLNAILKRKRE-ADSGNATDFGSKREEHSGGDEEGSQNDFRNIEDD 309
Query: 657 ECNFTISSHEAGVIPSEDELAYKDAIEAEDGIFXXXXXXXXEDCDKQDGDFHYESGEYKV 478
+ ED++ Y D++ D I + ++Q E +Y++
Sbjct: 310 IVGMNTEGNGEEAFQPEDDVVYGDSLSPADDIAAEAADDASRELEEQQDVETAEEYDYEM 369
Query: 477 DDENTI-------HSXXXXXXXXXXDFARKISVMLS 391
DD N + DFARK+ VM++
Sbjct: 370 DDVNAAEENDYQEYEDEDDDLEDDDDFARKVGVMIT 405
>ref|XP_006470901.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like [Citrus
sinensis]
Length = 740
Score = 85.1 bits (209), Expect = 5e-14
Identities = 99/309 (32%), Positives = 140/309 (45%), Gaps = 41/309 (13%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRS----SDLASNLLLEMGRRPQSRLSPVR-RTGYQTRNPERAWSQPS 1030
+SSRL GRI P RS SDL S LE GR S +SP R +T +Q R +R +
Sbjct: 450 LSSRLHGRIKPPRRSPVSGSDLRSERDLERGRN-WSSVSPGRPQTSHQGRLRDRIKGRVE 508
Query: 1029 EELNKDERIHRNKITPRD--GTNSLDFASPKSLSELRGTKIKNIHDINATSFNL-TVNKV 859
++ + ++ R+ DFA+PKSLSEL+G K NA S ++ K
Sbjct: 509 DDYSGGRNFRGPRMMRREMMDDRDADFAAPKSLSELKGKK-------NAESKEQQSLRKR 561
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKR------------KLANVE---DKFSTGR- 727
+S+ E R+ + LSF+GPMPLS IL+RKR AN+E K S G
Sbjct: 562 KSL--EDHRQPEGGLSFDGPMPLSEILKRKRGAGGATSASTEKSSANMEVENQKESQGSL 619
Query: 726 -HENNQSGGDSAITE------------SVPRLEAKKECNFTISSHEAGVIPSEDELAYKD 586
+N + SA++ +V E K E SS +P+ E+ +D
Sbjct: 620 VGSSNNTAAQSAVSTVSKEVSNYKEAGAVKETEGKNEATHDKSSQ----LPNASEVEAED 675
Query: 585 AIEAEDGIFXXXXXXXXEDCDKQDGDFHYE---SGEYKVDD-ENTIHSXXXXXXXXXXDF 418
+ AE+GI D +DG++ YE G+Y ++ EN DF
Sbjct: 676 GMIAEEGIEDHDLEAD----DLRDGEYEYEQGDEGDYNYEEGENAEGEEEYLEDEDGDDF 731
Query: 417 ARKISVMLS 391
A+KI VM S
Sbjct: 732 AKKIGVMFS 740
>gb|AEV40984.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza punctata]
Length = 712
Score = 84.3 bits (207), Expect = 9e-14
Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEMG--RRPQSRLSPVRRTGYQTRNPERAWSQPSEEL 1021
+SSRLQGRI PGRS D + RR + RLSPVRRT +Q A +
Sbjct: 445 LSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRRTEFQGARHREAGQHEEQTQ 504
Query: 1020 NKDERIHRNKITPR--DGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIK 847
+ + + PR DG +S +N+ D + +F N +S K
Sbjct: 505 RRSSEL---ALGPRNADGQHST----------------RNVPDSH--NFPHRKNLRDSSK 543
Query: 846 VEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLE 667
G E + L FEGP PLS ILQRKR+ A S+ + + + + E
Sbjct: 544 ANGSVEPEASLDFEGPKPLSVILQRKREAAWANG--SSACSPKQDKSAEVSRRQPISLAE 601
Query: 666 AKKECNFTISSHE------------AGVIPSE---DELAYKDAIEAEDGIFXXXXXXXXE 532
A+KE + ISS E G IP E ++ + +EAED I
Sbjct: 602 AEKEGDNIISSDEYKSGSGDEEFRDEGHIPVEGHGQSSSHGEKLEAEDIIEVDPVENQDA 661
Query: 531 D-CDKQDGDFHY---ESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +Y E +YK D+EN DFARK+ V+ S
Sbjct: 662 DNYDQREGESYYEPIEGQDYKSDEENAYEDDDEEYDDDDDDFARKVGVVFS 712
>gb|EOY01159.1| CCCH-type zinc finger family protein, putative [Theobroma cacao]
Length = 751
Score = 83.2 bits (204), Expect = 2e-13
Identities = 87/261 (33%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRS----SDLASNLLLEMGRRPQSRLSPVR--RTGYQTRNPERAWSQP 1033
+SSRL+GRI PGRS +DL S +E GR +LSP + + +Q R +R +
Sbjct: 461 LSSRLRGRIKLPGRSLVNGTDLHSEREIERGRN-WGQLSPGKPQTSSHQGRLHDRIKGRV 519
Query: 1032 SEELN-KDERIHRNKITPRD--GTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNK 862
E N K+ R R T RD ++ +FA PKSL+EL+ K N + S N
Sbjct: 520 EGEYNNKEGRNFRGPRTRRDIMDESNANFAGPKSLAELKVGK--NTENKEQQSLGKRKN- 576
Query: 861 VESIKVEGVRESQNPLSFEGPMPLSAILQRKRK---------LANVEDKFSTGRHENNQS 709
+E ++++ LSFEGPMPLS IL+RKR+ +A V + +
Sbjct: 577 -----IEEYQQTEGDLSFEGPMPLSEILKRKRQSGAAASGSGIAPVNKEDINQKQSKESL 631
Query: 708 GGDSAITESVPRLE---AKKECNFTIS-SHEAGVIPSE-DELAYKDAIEAEDGIF--XXX 550
G S T P LE K+E TI+ S + ++ E +L EAEDG+
Sbjct: 632 IGSSTNTVVSPTLEEANKKEESKSTIAESGKMEIVHGESSQLRNASKHEAEDGMIGDERM 691
Query: 549 XXXXXEDCDKQDGDFHYESGE 487
E D++DGD++YE G+
Sbjct: 692 EDHELEADDQRDGDYYYEQGD 712
>gb|EMT21128.1| Zinc finger CCCH domain-containing protein 32 [Aegilops tauschii]
Length = 649
Score = 82.8 bits (203), Expect = 3e-13
Identities = 91/296 (30%), Positives = 123/296 (41%), Gaps = 28/296 (9%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEMGRRPQ--SRLSPVRRTGYQTRNPERAWS------ 1039
+SSRLQGRI PGRS D R Q RLSPV Q A
Sbjct: 387 LSSRLQGRIKLPGRSPDRVDARSERERDRSQLRDRLSPVMPMDIQGGRHREAGHHQERIR 446
Query: 1038 QPSEELNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKV 859
Q S E RI K + R+ T+SL+FAS K
Sbjct: 447 QRSSERASSARIADGKHSRRNVTDSLNFASRKDFGP------------------------ 482
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESV 679
ES K G +S+ L FEGP PLS ILQRKR+ A+ S+ + + ++
Sbjct: 483 ESRKANGSVQSEASLDFEGPTPLSVILQRKRQAASGNGNGSSAHNVKEDKSAAVSHRQAE 542
Query: 678 PRLEAKKE-CNFTISSH------------EAGVIPSE----DELAYKDAIEAEDGIFXXX 550
+EA+KE + TISS E G +P+ D+ +D IE E+G
Sbjct: 543 SLVEAEKEGYDNTISSEEYKSRSGDEEYKEEGQVPASSSHGDKAEAEDIIEVENG----- 597
Query: 549 XXXXXEDCDKQDGDFHYESG---EYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
++ D++ G+ YE+ EYK +DEN + DFARK+ V+ S
Sbjct: 598 ---EADNYDQRQGESEYEATEGYEYKSEDENA-YQDDEEEFEDDDDFARKVGVVFS 649
>ref|XP_006420674.1| hypothetical protein CICLE_v10004417mg [Citrus clementina]
gi|557522547|gb|ESR33914.1| hypothetical protein
CICLE_v10004417mg [Citrus clementina]
Length = 737
Score = 82.4 bits (202), Expect = 3e-13
Identities = 99/309 (32%), Positives = 138/309 (44%), Gaps = 41/309 (13%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRS----SDLASNLLLEMGRRPQSRLSPVR-RTGYQTRNPERAWSQPS 1030
+SSRL GRI P RS SDL S LE GR S +SP R +T +Q R +R
Sbjct: 447 LSSRLHGRIKPPRRSLVSGSDLRSERDLERGRNWGS-VSPGRPQTSHQGRLRDRIKGTLE 505
Query: 1029 EELNKDERIHRNKITPRD--GTNSLDFASPKSLSELRGTKIKNIHDINATSFNL-TVNKV 859
++ + ++ R+ DFA PKSLSEL+G K NA S ++ K
Sbjct: 506 DDYSGGRNFRGPRMMRREMMDDRDADFAGPKSLSELKGKK-------NAESKEQQSLRKR 558
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKR------------KLANVE---DKFSTGR- 727
+S+ E R+ + LSF+GPMPLS IL+RKR AN+E K S G
Sbjct: 559 KSL--EDHRQPEGGLSFDGPMPLSEILKRKRGAGGATSASTEKSSANMEVENQKESQGSL 616
Query: 726 -HENNQSGGDSAITE------------SVPRLEAKKECNFTISSHEAGVIPSEDELAYKD 586
+N + SA++ +V E K E SS +P+ E+ +D
Sbjct: 617 VGSSNNTAAQSAVSTVSKEVSNYKEAGAVKETEGKNEATHDKSSQ----LPNASEVEAED 672
Query: 585 AIEAEDGIFXXXXXXXXEDCDKQDGDFHYE---SGEYKVDD-ENTIHSXXXXXXXXXXDF 418
+ AE+GI D +DG++ YE G+Y ++ EN DF
Sbjct: 673 GMIAEEGIEDHDLEAD----DLRDGEYEYEQGDEGDYNYEEGENAEGEEEYLEDEDGDDF 728
Query: 417 ARKISVMLS 391
A+KI VM S
Sbjct: 729 AKKIGVMFS 737
>gb|AEV41035.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza minuta]
Length = 711
Score = 82.0 bits (201), Expect = 4e-13
Identities = 88/291 (30%), Positives = 125/291 (42%), Gaps = 23/291 (7%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEMG--RRPQSRLSPVRRTGYQTRNPERAWSQPSEEL 1021
+SSRLQGRI PGRS D + RR + RLSPVRRT +Q A +
Sbjct: 445 LSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRRTEFQGARHREAGQHEEQTQ 504
Query: 1020 NKDERIHRNKITPR--DGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIK 847
+ + + PR DG +S +N+ D + +F N +S K
Sbjct: 505 RRSSEL---ALGPRNADGQHST----------------RNVPDSH--NFPHRKNLRDSSK 543
Query: 846 VEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLE 667
G E + L FEGP PLS ILQRKR+ A S+ + + + + E
Sbjct: 544 ANGSVEPEASLDFEGPKPLSVILQRKREAAWANG--SSACSPKQDKSAEVSCRQPISLAE 601
Query: 666 AKKECNFTISSHE------------AGVIPSE---DELAYKDAIEAEDGIFXXXXXXXXE 532
A+KE + ISS E G IP E ++ + +EAED I
Sbjct: 602 AEKEGDNIISSDEYKSGSGDEEFRDEGHIPVEGHGQSSSHGEKLEAEDIIEVDPVENQDA 661
Query: 531 D-CDKQDGDFHY---ESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +Y E +YK D+EN + DFARK+ V+ S
Sbjct: 662 DNYDRREGESYYEPIEGQDYKSDEENA-YEDDDEEYDDDDDFARKVGVVFS 711
>ref|XP_002312505.2| zinc finger family protein [Populus trichocarpa]
gi|550333063|gb|EEE89872.2| zinc finger family protein
[Populus trichocarpa]
Length = 742
Score = 81.6 bits (200), Expect = 6e-13
Identities = 99/322 (30%), Positives = 142/322 (44%), Gaps = 54/322 (16%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRS----SDLASNLLLEMGRRPQSRLSPVRR--TGYQTRNPERAWSQP 1033
ISSRL+GRI PGRS D+ + ++ GR + RLSPVR T Q R +R ++
Sbjct: 441 ISSRLRGRIKLPGRSPNNGGDVRAEREIDRGRN-RGRLSPVRSPVTSQQGRLRDRMKARV 499
Query: 1032 SEELNKDERIHRNKITPR---DGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNK 862
E+ N+ ++ DG S DFA PKSL+EL+G K NA K
Sbjct: 500 EEDYNEGRSFRGPQVRGELMDDG--STDFAGPKSLAELKGGK-------NAEG------K 544
Query: 861 VESIKVEGVRESQNP-----LSFEGPMPLSAILQRKRK--LANVEDKFSTGRHENN---- 715
++ + NP LSFEGPMPLS IL+RKR+ A S+ +NN
Sbjct: 545 LQQSLGKRKHSEDNPSSDAVLSFEGPMPLSEILKRKREGGAAASRSGISSVIKDNNNLKE 604
Query: 714 ----------------QSGGDSAITE--SVPRLEAKKEC------------NFTISSHEA 625
QSG S + S L+ K+E N I+ ++
Sbjct: 605 SKQSLISNSKKADAEMQSGISSVSKDDNSSQMLKNKEESKVATDGAIGTEENIEIAHGQS 664
Query: 624 GVIPSEDELAYKDAIEAEDGIFXXXXXXXXEDCDKQDGDFHYE---SGEYKVDD-ENTIH 457
+P+ E+ +D I A+DG+ E D++D ++ YE GEY ++ EN
Sbjct: 665 SQLPNPSEIETEDGIIADDGM----EDHEYEGDDQRDDNYEYEQVDEGEYNYEEGENIDG 720
Query: 456 SXXXXXXXXXXDFARKISVMLS 391
DFA+KI V++S
Sbjct: 721 EEEYEDEEDGEDFAKKIGVVIS 742
>ref|XP_004236893.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
[Solanum lycopersicum]
Length = 714
Score = 81.6 bits (200), Expect = 6e-13
Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 19/287 (6%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEMGR-RPQSRLSPVRRTGY--QTRNPERAWSQPSEE 1024
++SRL+GRI P RS + + + R R + RLS R + Q R +R + E+
Sbjct: 433 LASRLRGRIKLPSRSPSPTNGTDMRLDRARDRGRLSSERPQLFSQQGRLRDRIKGRVQED 492
Query: 1023 LNKDERIHRNKITPRD-GTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIK 847
LN R + RD N +F+ P+SL+EL+G K ++ N + +
Sbjct: 493 LNDSGRNNSGPRIRRDVSENDSNFSGPRSLAELKGRKTAETNEQNIDEQQALGKRKFQKR 552
Query: 846 VEGVRESQNPLSFEGPMPLSAILQRKR--KLANVEDKFSTGRHENNQSG---GDSAITES 682
+ + + +SF+GPMPL IL+RKR K DK +HE N S+I+ +
Sbjct: 553 DDYQQTGGDNISFDGPMPLQEILKRKRNSKTGMTSDKSEDHQHERNDHALPVVTSSISRN 612
Query: 681 VPRLEAKKECNFTISSHEAGVIPSEDELAYKDA--IEAEDGIFXXXXXXXXEDC---DKQ 517
E K+E S +GV+ A+ A +EAE+G+ + D++
Sbjct: 613 NTDFEQKEE-----SDPPSGVLADHKSPAHHVANELEAEEGMIMEEADDQDPEAEGHDQR 667
Query: 516 DGDFHYE---SGEYKVDDENTIHS--XXXXXXXXXXDFARKISVMLS 391
DGD+ YE +Y +D+ I + +FA+K+ V+ S
Sbjct: 668 DGDYDYEQVDGEDYNLDEGENIDAGEEYLDEDDDEDEFAKKMGVVFS 714
>ref|NP_001054221.1| Os04g0671800 [Oryza sativa Japonica Group]
gi|122222124|sp|Q0J952.1|C3H32_ORYSJ RecName: Full=Zinc
finger CCCH domain-containing protein 32; Short=OsC3H32
gi|70663941|emb|CAE03603.2| OSJNBb0004A17.5 [Oryza sativa
Japonica Group] gi|113565792|dbj|BAF16135.1| Os04g0671800
[Oryza sativa Japonica Group] gi|125592021|gb|EAZ32371.1|
hypothetical protein OsJ_16582 [Oryza sativa Japonica
Group]
Length = 711
Score = 80.5 bits (197), Expect = 1e-12
Identities = 93/291 (31%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEM--GRRPQSRLSPVRRTGYQ-TRNPERAWSQPSEE 1024
+SSRLQGRI PGRS D + RR + RLSPVRRT +Q TR+ E
Sbjct: 446 LSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRRTEFQGTRHREAG------- 498
Query: 1023 LNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKI-KNIHDINATSFNLTVNKVESIK 847
+E+ R G+ + D G + K++ D + +F N +S K
Sbjct: 499 -QHEEQTQRRSSELALGSRNAD-----------GQHLTKDVPD--SHNFPHRKNSRDSSK 544
Query: 846 VEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLE 667
G E + L FEGP PLS ILQRKR+ A T Q E
Sbjct: 545 ANGSVEPEASLDFEGPKPLSVILQRKREAAWAN---GTSACSPKQDKSAEVSHRQASLAE 601
Query: 666 AKKECNFTISSHE------------AGVIPSE---DELAYKDAIEAEDGIFXXXXXXXXE 532
A+KE + ISS E G IP E ++ D +EAED I
Sbjct: 602 AEKEGDNIISSDEYKSGSGDEEFRDEGHIPVEGHGQSSSHGDKLEAEDIIEVDPVENQDA 661
Query: 531 D-CDKQDGDFHY---ESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +Y E +YK DDEN + DFARK+ V+ S
Sbjct: 662 DNYDQREGESYYEPIEGQDYKSDDENA-YEDDDEEYDDDDDFARKVGVVFS 711
>gb|EMS54397.1| Zinc finger CCCH domain-containing protein 32 [Triticum urartu]
Length = 895
Score = 80.1 bits (196), Expect = 2e-12
Identities = 91/292 (31%), Positives = 125/292 (42%), Gaps = 24/292 (8%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSD-LASNLLLEMGRRP-QSRLSPVRRTGYQTRNPERAWS------ 1039
+SSRLQGRI PGRS D + + E RR + RLSPV Q A
Sbjct: 633 LSSRLQGRIKLPGRSPDRVDARSERERDRRQLRDRLSPVVPMDIQGGRHREAGHHQERIR 692
Query: 1038 QPSEELNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKV 859
Q S E RI K + R+ T+SL+FAS K
Sbjct: 693 QRSSERASSARIADGKHSRRNVTDSLNFASRKDFGP------------------------ 728
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESV 679
ES K G +S+ L FEGP PLS ILQRKR+ A S+ + + ++
Sbjct: 729 ESRKANGSVQSEASLDFEGPTPLSVILQRKRQAACGNGNGSSAHNVKEDKSAAVSHRQAE 788
Query: 678 PRLEAKKE-CNFTISSHEA------------GVIPSEDELAYKDAIEAEDGIFXXXXXXX 538
+EA+KE + TISS E G +P+ ++ D EAED I
Sbjct: 789 SLVEAEKEGYDNTISSEECKSRSGDEEYKEEGQVPASS--SHGDKAEAEDMI--EVENQE 844
Query: 537 XEDCDKQDGDFHYESG---EYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
++ +++ G+ YE+ EYK +DEN + DFARK+ V+ S
Sbjct: 845 ADNYEQRQGESEYEATEGYEYKSEDENA-YQDDEEEFEDDDDFARKVGVVFS 895
>emb|CAH67704.1| H0624F09.12 [Oryza sativa Indica Group] gi|125550180|gb|EAY96002.1|
hypothetical protein OsI_17873 [Oryza sativa Indica
Group]
Length = 711
Score = 80.1 bits (196), Expect = 2e-12
Identities = 93/295 (31%), Positives = 121/295 (41%), Gaps = 27/295 (9%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEM--GRRPQSRLSPVRRTGYQ-TRNPERAWSQP--- 1033
+SSRLQGRI PGRS D + RR + RLSPVRRT +Q TR+ E +
Sbjct: 446 LSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRRTEFQGTRHREAGQHEEQTQ 505
Query: 1032 --SEELNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKV 859
S EL R + +D +S +F K+L
Sbjct: 506 RRSSELALGSRNADGQHLTKDVPDSHNFPHRKNLR------------------------- 540
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESV 679
+S K G E + L FEGP PLS ILQRKR+ A T Q
Sbjct: 541 DSSKANGSVEPEASLDFEGPKPLSVILQRKREAAWAN---GTSACSPKQDKSAEVSHRQA 597
Query: 678 PRLEAKKECNFTISSHE------------AGVIPSE---DELAYKDAIEAEDGIFXXXXX 544
EA+KE + ISS E G IP E ++ D +EAED I
Sbjct: 598 SLAEAEKEGDNIISSDEYKSGSGDEEFRDEGHIPVEGHGQSSSHGDKLEAEDIIEVDPVE 657
Query: 543 XXXED-CDKQDGDFHY---ESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +Y E +YK DDEN + DFARK+ V+ S
Sbjct: 658 NQDADNYDQREGESYYEPIEGQDYKSDDENA-YEDDDEEYDDDDDFARKVGVVFS 711
>gb|EXB97153.1| Zinc finger CCCH domain-containing protein 17 [Morus notabilis]
Length = 712
Score = 79.7 bits (195), Expect = 2e-12
Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSS----DLASNLLLEMGRRPQSRLSPVRRTG--YQTRNPERAWSQP 1033
+SSRL+GRI PG SS DL + + GR + RLSP R +Q R +R +
Sbjct: 434 LSSRLRGRIKLPGGSSVNGGDLRHDREFDRGRS-RGRLSPSRPQSSIHQGRLRDRLKGKV 492
Query: 1032 SEELNKDERIHRNKITPRDGTNS-LDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVE 856
E+ N + RI R R+ T+ DFA+PK LSEL+ K+ + + + K +
Sbjct: 493 QEDYNSEGRIFRGFPPGREATDEGTDFAAPKKLSELKVGKVTENKE------HSHLGKRK 546
Query: 855 SIKVEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITES-- 682
S ++E + + SFEGP PLS IL+RKR+ E SG +I+E+
Sbjct: 547 STRMEVSQPPEGDRSFEGPKPLSEILKRKREA------------EAAGSGSAKSISEARR 594
Query: 681 VPRLEAKKECNFTISSHE-------AGVIPSEDE--------LAYKDAIEAEDG-IFXXX 550
V AK+E N ++ S++ V+ +EDE + +E EDG I+
Sbjct: 595 VSSSLAKEEGNSSVFSNKEESKSATIDVVGTEDEKIEGPDSHAPDANDLEVEDGMIYDET 654
Query: 549 XXXXXEDC-DKQDGDFHY----ESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
+ D+ G++ + E GEY ++ DFA+KI VM S
Sbjct: 655 VDDQELEAEDQTHGEYDFEQGEEEGEYDGENAEEGEEEYLEDEDGDDDFAKKIGVMFS 712
>gb|AEV41082.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza minuta]
Length = 711
Score = 79.7 bits (195), Expect = 2e-12
Identities = 92/295 (31%), Positives = 122/295 (41%), Gaps = 27/295 (9%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEMG--RRPQSRLSPVRRTGYQTRNPERAWSQP---- 1033
+SSRLQGRI PGRS D + RR + RLSP RRT +Q A
Sbjct: 446 LSSRLQGRIKLPGRSLDRVDTRSEKERDRRRLRDRLSPARRTEFQGARHREAGQHEEQTR 505
Query: 1032 --SEELNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKV 859
S EL R + + RD +S +F K+L +
Sbjct: 506 RRSSELALGARNADGQHSTRDVPDSHNFPHRKNLRD------------------------ 541
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESV 679
S K G E + L FEGP PLS ILQRKR+ A S+ + + + +
Sbjct: 542 -SSKANGSVEPEASLDFEGPKPLSVILQRKREAAWANG--SSACSPKQDKSAEVSHRQPI 598
Query: 678 PRLEAKKECNFTISSHE------------AGVIPSE---DELAYKDAIEAEDGIFXXXXX 544
EA+KE + ISS E G IP E ++ D +EAED I
Sbjct: 599 SLAEAEKEGDNIISSDEYKSGSGDEEFRDEGHIPVEGHGQSSSHGDKLEAEDIIEVDPVE 658
Query: 543 XXXED-CDKQDGDFHYE--SG-EYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +YE SG +YK DDEN DFARK+ V+ S
Sbjct: 659 NQDADNYDQREGESYYEPISGQDYKSDDENAYED--DEEYDDDDDFARKVGVVFS 711
>gb|AEV41128.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza officinalis]
Length = 712
Score = 78.6 bits (192), Expect = 5e-12
Identities = 89/295 (30%), Positives = 122/295 (41%), Gaps = 27/295 (9%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEMG--RRPQSRLSPVRRTGYQTRNPERAWSQP---- 1033
+SSRLQGRI PGRS D + RR + RLSP RRT +Q A
Sbjct: 446 LSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPARRTEFQGARHREAGQHEEQTR 505
Query: 1032 --SEELNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKV 859
S EL R + + RD +S +F K+L +
Sbjct: 506 RRSSELALGARNADGQHSTRDVPDSHNFPHRKNLRD------------------------ 541
Query: 858 ESIKVEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESV 679
S K G E + L FEGP PLS ILQRKR+ A S+ + + + +
Sbjct: 542 -SSKANGSVEPEVSLDFEGPKPLSVILQRKREAAWANG--SSACSPKQDKSAEVSRRQPI 598
Query: 678 PRLEAKKECNFTISSHEAGVIPSEDEL---------------AYKDAIEAEDGIFXXXXX 544
EA+KE + ISS E ++E ++ D +EAED I
Sbjct: 599 SLAEAEKEGDNIISSDEYKSGSGDEEFRDEGHISVEGHGQSSSHGDKLEAEDIIEVDPVE 658
Query: 543 XXXED-CDKQDGDFHYE--SG-EYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +YE SG +YK DDEN + DFARK+ V+ S
Sbjct: 659 NQDADNYDQREGESYYEPISGQDYKSDDENA-YEDDEEYDDDDDDFARKVGVVFS 712
>gb|ADX60253.1| C3H-related transcription factor [Oryza sativa Japonica Group]
Length = 711
Score = 78.6 bits (192), Expect = 5e-12
Identities = 92/291 (31%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Frame = -3
Query: 1194 ISSRLQGRIAFPGRSSDLASNLLLEM--GRRPQSRLSPVRRTGYQ-TRNPERAWSQPSEE 1024
+SSRLQGRI PGRS D + RR + RLSPVRRT +Q TR+ E
Sbjct: 446 LSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRRTEFQGTRHREAG------- 498
Query: 1023 LNKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKI-KNIHDINATSFNLTVNKVESIK 847
+E+ R G+ + D G + K++ D + +F N +S K
Sbjct: 499 -QHEEQTQRRSSELALGSRNAD-----------GQHLTKDVPD--SHNFPHRKNSRDSSK 544
Query: 846 VEGVRESQNPLSFEGPMPLSAILQRKRKLANVEDKFSTGRHENNQSGGDSAITESVPRLE 667
G E + L FEGP PLS ILQRKR+ A T Q E
Sbjct: 545 ANGSVEPEASLDFEGPKPLSVILQRKREAAWAN---GTSACSPKQDKSAEVSHRQASLAE 601
Query: 666 AKKECNFTISSHE------------AGVIPSE---DELAYKDAIEAEDGIFXXXXXXXXE 532
A+KE + ISS E G IP E ++ D +EAED I
Sbjct: 602 AEKEGDNIISSDEYKSGSGDEEFRDEGHIPVEGHGQSSSHGDKLEAEDIIEVDPVENQDA 661
Query: 531 D-CDKQDGDFHY---ESGEYKVDDENTIHSXXXXXXXXXXDFARKISVMLS 391
D D+++G+ +Y E +YK DDE+ + DFARK+ V+ S
Sbjct: 662 DNYDQREGESYYEPIEGQDYKSDDEDA-YEDDDEEYDDDDDFARKVGVVFS 711
>ref|XP_004954519.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Setaria italica]
Length = 665
Score = 77.8 bits (190), Expect = 8e-12
Identities = 82/305 (26%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Frame = -3
Query: 1188 SRLQGRIAFPGRSS--DLASNLLLEMGRRPQSRLSPVRRTGYQTRNPERAWSQPSEEL-- 1021
SRL+ RI PG +S L S E R P+ RLSP + + + + ER ++ +EE+
Sbjct: 373 SRLRDRIRLPGETSLDRLGSRSEKEWDRGPRGRLSPPKHSDLRGKLHERLKARSAEEIPG 432
Query: 1020 NKDERIHRNKITPRDGTNSLDFASPKSLSELRGTKIKNIHDINATSFNLTVNKVESIKV- 844
N + + T D SL+FA PKSL+EL+ K +++ + V + S ++
Sbjct: 433 NSAKSLVVKASTVEDA-ESLNFAGPKSLAELKAKKGVG----SSSGEDAIVKGISSSRMT 487
Query: 843 EGVRESQNPLSFEGPMPLSAILQRKRKLAN----------VEDKFSTGRHENNQSGGDSA 694
G+ S+ P FEGP PLSAIL+RKR++A+ ED + G E +Q +
Sbjct: 488 SGIIPSREPAPFEGPKPLSAILKRKREVASENAAAHSGSIQEDDDAAGVDEESQILANDK 547
Query: 693 ITESVPRLEAKKECNFTISSHEAGVIPSEDELAYKDAI---------------------E 577
+ E++ E N E ED++AY D
Sbjct: 548 VGENM-------EGNIEEEEAEEEAFHPEDDVAYDDEAADQELEEHQNVEAAAEDYDYEA 600
Query: 576 AEDGIFXXXXXXXXEDCDKQDGDFHYESGEYKVDDEN---TIHSXXXXXXXXXXDFARKI 406
A+ +D + D+ YE+ + +++N DFARK+
Sbjct: 601 ADANTAAGQELEEHQDVEAAAEDYDYEAADVNAEEDNEYQEYQDDDDDLEDDDDDFARKV 660
Query: 405 SVMLS 391
VM+S
Sbjct: 661 GVMIS 665