BLASTX nr result
ID: Zingiber25_contig00019308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00019308
(1317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b... 377 e-102
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 375 e-101
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ... 374 e-101
ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform ... 374 e-101
ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform ... 374 e-101
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g... 372 e-100
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi... 370 e-100
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S... 364 4e-98
gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii] 363 1e-97
dbj|BAJ84827.1| predicted protein [Hordeum vulgare subsp. vulgare] 359 2e-96
ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, p... 357 8e-96
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The... 357 8e-96
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca... 357 8e-96
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca... 357 8e-96
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 355 2e-95
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr... 353 1e-94
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 353 1e-94
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A... 352 3e-94
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 351 4e-94
ref|XP_003573489.1| PREDICTED: DNA topoisomerase 1-like [Brachyp... 350 6e-94
>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
Length = 911
Score = 377 bits (967), Expect = e-102
Identities = 224/438 (51%), Positives = 271/438 (61%), Gaps = 22/438 (5%)
Frame = -3
Query: 1252 SVDSEKAHTHSSVH-KFEGRSTEKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFSHA 1076
S DSE H + K E ++ +K + + +++SDD+KPLS+K + S ++
Sbjct: 114 SDDSEDDHKPIGLRRKVEDKNFKKAAVGSET---ADDSDDNKPLSLKINSTKTPSNSTNK 170
Query: 1075 A------------------EAPQXXXXXXXXXXXXXSNTSEETDDSEDAKPLLSRFQSNV 950
A E P +N S DDSED KPL +RF S V
Sbjct: 171 ASVLKVTPKIVQPADDSEDEKPLARRLPAKTTLKSGANAS---DDSEDEKPLAARF-SKV 226
Query: 949 IGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAK 770
G +SA +S+ +K ++ T + KRP+ D N S+ KKA+
Sbjct: 227 TGSASASISSSKDKVQSANLKPSSSSKVS-NNDTNTSRNSIKRPI-DNNNQSISALKKAR 284
Query: 769 LTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMKKSPSSNSASINQNTLLKTASSSFKK 590
+ SVSA VK +ESK DDND+ P++QR+K SS S +N ++K SSFKK
Sbjct: 285 PSDVSVSASVK------RESKADDNDNIPLSQRLKMGESSKSKPPAKN-IVKKNPSSFKK 337
Query: 589 SNLTMNKKR---DSKFSKSLKAPVGSGGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPV 419
+ M K+ +S+FSK++K P GSGG QKWTTL HNGVIFPP YKPHG+KMLY GQPV
Sbjct: 338 DSKKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHNGVIFPPPYKPHGVKMLYNGQPV 397
Query: 418 DLTPEQEEVATMFAVMKDTDYALKKQFIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWH 239
DLTPEQEEVATMF+VMKDTDYA K+ FI NF DWR ILGKNHIIKKFE CDFTPIYEWH
Sbjct: 398 DLTPEQEEVATMFSVMKDTDYASKQTFIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWH 457
Query: 238 LKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPK 59
L+EKEKKKQMTS KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPK
Sbjct: 458 LREKEKKKQMTSEEKKAVKEEKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPK 517
Query: 58 MGKLKNRIKPRDITINIG 5
MGKLK RI+P DITINIG
Sbjct: 518 MGKLKRRIQPSDITINIG 535
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 375 bits (962), Expect = e-101
Identities = 207/395 (52%), Positives = 251/395 (63%), Gaps = 12/395 (3%)
Frame = -3
Query: 1153 SENSDDDKPLSVKYSGVINRSAFSHA---AEAPQXXXXXXXXXXXXXSNTSEETDDSEDA 983
S++S+D+ PL +K + A S ++ N +DDSED
Sbjct: 114 SDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDE 173
Query: 982 KPLLSRFQSNV-IGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDA 806
PL S+F+ +G S K+ N EK + +PKG KRPL A
Sbjct: 174 IPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQA 233
Query: 805 NPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDND-------HTPIAQRMKKSPSSN 647
N + SSSKK KL SV KVKQ VSV E K+DD+D +TP +R+KKS SS+
Sbjct: 234 NTSHHSSSKKPKLLDGSVKGKVKQ-VSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSD 292
Query: 646 SASINQNTLLKTA-SSSFKKSNLTMNKKRDSKFSKSLKAPVGSGGEQKWTTLQHNGVIFP 470
+ ++ ++ ++ + KK+ + + SK+SKS K P SG QKWTTL+HNGVIFP
Sbjct: 293 NKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFP 352
Query: 469 PLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFMDDWRLILGKNH 290
P YKPHG+KMLY G+PVDLTPEQEEVATMFAVMKDTDYA K +FI+NFM+DWR+ LGKNH
Sbjct: 353 PPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNH 412
Query: 289 IIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGN 110
+IKKFE CDFTPIYEWH KEKEKKKQMT+ KYMWA+VDGVKEKVGN
Sbjct: 413 VIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMWAVVDGVKEKVGN 472
Query: 109 FRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
FRVEPPGLFRGRGEHPKMGKLK RI P DITINIG
Sbjct: 473 FRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIG 507
>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
Length = 903
Score = 374 bits (961), Expect = e-101
Identities = 212/412 (51%), Positives = 259/412 (62%), Gaps = 16/412 (3%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFS-HAAEAPQXXXXXXXXXXXXXSNT 1013
+K+ VD+ K+++SDDDKPLS+K IN S S + A P +
Sbjct: 139 KKLKRVDE---KADDSDDDKPLSLK----INSSKMSSNCASRP--------VLQKAVAKV 183
Query: 1012 SEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPE----------KPXXXXXXXXXXXXXG 863
+ +DS+D KPL SR +N S S E K G
Sbjct: 184 EQPDEDSDDDKPLASRLPTNAAPKSGGNASEDSEDEKPLAARFSKVSGSGNLKLTSSSKG 243
Query: 862 ISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTP 683
+++ + P+ KRPL ++N S + KKAK + S SA VK+E+ K DDND+TP
Sbjct: 244 LNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREI------KADDNDNTP 296
Query: 682 IAQRMKKSPSSNSASINQNTLLKTASSSFK-----KSNLTMNKKRDSKFSKSLKAPVGSG 518
+AQR+K SS +N + K+ +S K K + ++S+FSK++K P GSG
Sbjct: 297 LAQRLKIGESSKGKPSAKNVVKKSPASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSG 356
Query: 517 GEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQF 338
G +KWTTL+HNGVIFPP YKPHG+KMLY GQPVDLTPEQEEVATMFAVMKDTDYA K F
Sbjct: 357 GGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTF 416
Query: 337 IKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXX 158
I+NF DWR +LGKNH+IKKFE CDFTPIYEWHL+EKEKKKQMT+
Sbjct: 417 IENFFTDWRTLLGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREEKLKQEE 476
Query: 157 KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIGD 2
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIKP DITINIG+
Sbjct: 477 KYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGE 528
>ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Setaria italica]
Length = 930
Score = 374 bits (961), Expect = e-101
Identities = 212/412 (51%), Positives = 259/412 (62%), Gaps = 16/412 (3%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFS-HAAEAPQXXXXXXXXXXXXXSNT 1013
+K+ VD+ K+++SDDDKPLS+K IN S S + A P +
Sbjct: 139 KKLKRVDE---KADDSDDDKPLSLK----INSSKMSSNCASRP--------VLQKAVAKV 183
Query: 1012 SEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPE----------KPXXXXXXXXXXXXXG 863
+ +DS+D KPL SR +N S S E K G
Sbjct: 184 EQPDEDSDDDKPLASRLPTNAAPKSGGNASEDSEDEKPLAARFSKVSGSGNLKLTSSSKG 243
Query: 862 ISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTP 683
+++ + P+ KRPL ++N S + KKAK + S SA VK+E+ K DDND+TP
Sbjct: 244 LNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREI------KADDNDNTP 296
Query: 682 IAQRMKKSPSSNSASINQNTLLKTASSSFK-----KSNLTMNKKRDSKFSKSLKAPVGSG 518
+AQR+K SS +N + K+ +S K K + ++S+FSK++K P GSG
Sbjct: 297 LAQRLKIGESSKGKPSAKNVVKKSPASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSG 356
Query: 517 GEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQF 338
G +KWTTL+HNGVIFPP YKPHG+KMLY GQPVDLTPEQEEVATMFAVMKDTDYA K F
Sbjct: 357 GGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTF 416
Query: 337 IKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXX 158
I+NF DWR +LGKNH+IKKFE CDFTPIYEWHL+EKEKKKQMT+
Sbjct: 417 IENFFTDWRTLLGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREEKLKQEE 476
Query: 157 KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIGD 2
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIKP DITINIG+
Sbjct: 477 KYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGE 528
>ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Setaria italica]
Length = 932
Score = 374 bits (961), Expect = e-101
Identities = 212/412 (51%), Positives = 259/412 (62%), Gaps = 16/412 (3%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFS-HAAEAPQXXXXXXXXXXXXXSNT 1013
+K+ VD+ K+++SDDDKPLS+K IN S S + A P +
Sbjct: 139 KKLKRVDE---KADDSDDDKPLSLK----INSSKMSSNCASRP--------VLQKAVAKV 183
Query: 1012 SEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPE----------KPXXXXXXXXXXXXXG 863
+ +DS+D KPL SR +N S S E K G
Sbjct: 184 EQPDEDSDDDKPLASRLPTNAAPKSGGNASEDSEDEKPLAARFSKVSGSGNLKLTSSSKG 243
Query: 862 ISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTP 683
+++ + P+ KRPL ++N S + KKAK + S SA VK+E+ K DDND+TP
Sbjct: 244 LNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREI------KADDNDNTP 296
Query: 682 IAQRMKKSPSSNSASINQNTLLKTASSSFK-----KSNLTMNKKRDSKFSKSLKAPVGSG 518
+AQR+K SS +N + K+ +S K K + ++S+FSK++K P GSG
Sbjct: 297 LAQRLKIGESSKGKPSAKNVVKKSPASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSG 356
Query: 517 GEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQF 338
G +KWTTL+HNGVIFPP YKPHG+KMLY GQPVDLTPEQEEVATMFAVMKDTDYA K F
Sbjct: 357 GGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTF 416
Query: 337 IKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXX 158
I+NF DWR +LGKNH+IKKFE CDFTPIYEWHL+EKEKKKQMT+
Sbjct: 417 IENFFTDWRTLLGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREEKLKQEE 476
Query: 157 KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIGD 2
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIKP DITINIG+
Sbjct: 477 KYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGE 528
>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
[Oryza sativa Japonica Group]
gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
protein OsJ_26075 [Oryza sativa Japonica Group]
Length = 916
Score = 372 bits (954), Expect = e-100
Identities = 228/468 (48%), Positives = 274/468 (58%), Gaps = 37/468 (7%)
Frame = -3
Query: 1297 SHRHNSVSAIVQRKCSVDSEKAHTHSSVHKFEG--RSTEKMDLVDDPIIKS---ENSDDD 1133
SH NSV ++ V+ +K+ HK G R E +L P + S +SDDD
Sbjct: 95 SHNSNSVDKSKLKRPFVE-DKSDDSEDDHKPIGLRRKVEDRNL-KKPAVGSGTANDSDDD 152
Query: 1132 KPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNTSEETDDSEDAKPLLSRFQSN 953
KPLS+K + S+ ++ A + DDSED KPL SR +N
Sbjct: 153 KPLSLKINSTKTPSSSANKA-----------IVLKTTPKIEQPGDDSEDDKPLASRLPTN 201
Query: 952 -------------------------VIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKT 848
V G +SA +S+ +K + +
Sbjct: 202 AALKRGGNVSDDSEDEKPLAARFSKVTGNASASISSSKDKVLSASIKASSSSKMSNNDAS 261
Query: 847 TAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRM 668
T+ + KRP+ D N SS+ KKA+ + S SA VK +E K DDND+ P++QR+
Sbjct: 262 TS-RNSIKRPI-DNNNQTSSALKKARPSDVSASASVK------REPKADDNDNVPLSQRL 313
Query: 667 KKSPSSNSASINQNTLLKTASSSFKKSNLTMNKK-------RDSKFSKSLKAPVGSGGEQ 509
K SS S +N ++K + SS KK N M K ++S+FSK++K P GSGG Q
Sbjct: 314 KMGESSKSKPPAKN-IVKKSPSSLKKDNKKMKMKMKTKKTMKNSQFSKTMKVPPGSGGGQ 372
Query: 508 KWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKN 329
KWTTL H+GVIFPP YKPHG+KMLY GQPVDLTPEQEEVATMFAVMKDTDYA K+ FI N
Sbjct: 373 KWTTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYASKQTFIDN 432
Query: 328 FMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYM 149
F DWR ILGKNH+IKKFE CDFTPIYEWHL+EKEKKKQMTS KYM
Sbjct: 433 FFTDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALKEEKLKQEEKYM 492
Query: 148 WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIKP DITINIG
Sbjct: 493 WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIG 540
>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
Length = 916
Score = 370 bits (950), Expect = e-100
Identities = 227/468 (48%), Positives = 274/468 (58%), Gaps = 37/468 (7%)
Frame = -3
Query: 1297 SHRHNSVSAIVQRKCSVDSEKAHTHSSVHKFEG--RSTEKMDLVDDPIIKS---ENSDDD 1133
SH NSV ++ V+ +K+ HK G R E +L P + S +SDDD
Sbjct: 95 SHNSNSVDKSKLKRPFVE-DKSDDSEDDHKPIGLRRKVEDRNL-KKPAVGSGTANDSDDD 152
Query: 1132 KPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNTSEETDDSEDAKPLLSRFQSN 953
KPLS+K + S+ ++ A + DDSED KPL SR +N
Sbjct: 153 KPLSLKINSTKTPSSSANKA-----------IVLKTTPKIEQPGDDSEDDKPLASRLPTN 201
Query: 952 -------------------------VIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKT 848
V G +SA +S+ +K + +
Sbjct: 202 AALKRGGNVSDDSEDEKPLAARFSKVTGNASASISSSKDKVLSASIKASSSSKMSNNDAS 261
Query: 847 TAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRM 668
T+ + KRP+ D N SS+ KKA+ + S SA VK +E K DDND+ P++QR+
Sbjct: 262 TS-RNSIKRPI-DNNNQTSSALKKARPSDVSASASVK------REPKADDNDNVPLSQRL 313
Query: 667 KKSPSSNSASINQNTLLKTASSSFKKSNLTMNKK-------RDSKFSKSLKAPVGSGGEQ 509
K SS S +N ++K + SS KK N M K ++S+FSK++K P GSGG Q
Sbjct: 314 KMGESSKSKPPAKN-IVKKSPSSLKKDNKKMKMKLKTKKTMKNSQFSKTMKVPPGSGGGQ 372
Query: 508 KWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKN 329
KWTTL H+GVIFPP YKPHG+K+LY GQPVDLTPEQEEVATMFAVMKDTDYA K+ FI N
Sbjct: 373 KWTTLVHSGVIFPPPYKPHGVKILYNGQPVDLTPEQEEVATMFAVMKDTDYASKQTFIDN 432
Query: 328 FMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYM 149
F DWR ILGKNH+IKKFE CDFTPIYEWHL+EKEKKKQMTS KYM
Sbjct: 433 FFTDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALKEEKLKQEEKYM 492
Query: 148 WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIKP DITINIG
Sbjct: 493 WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIG 540
>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
gi|241940222|gb|EES13367.1| hypothetical protein
SORBIDRAFT_07g003610 [Sorghum bicolor]
Length = 921
Score = 364 bits (935), Expect = 4e-98
Identities = 212/412 (51%), Positives = 256/412 (62%), Gaps = 17/412 (4%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSDDD-KPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNT 1013
+K+ VD + K+++SDDD KPLS+K IN S S+ + +
Sbjct: 153 KKLKRVDTAVHKADDSDDDDKPLSLK----INSSKMSNNSVSKPVLQRIAP-------KV 201
Query: 1012 SEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPE----------KPXXXXXXXXXXXXXG 863
+ +DS+D KPL SR +N S VS E K G
Sbjct: 202 EQPDEDSDDDKPLASRLPNNACPKSGGNVSEDSEDEKPLAARFSKVAGSGNLKTASSSKG 261
Query: 862 ISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTP 683
++S T + KRPL ++N S + KKAK + S SA VK+E+ K DDND+TP
Sbjct: 262 LNSDTNGQRSLGKRPLDNSNQT-SLAIKKAKPSNVSASASVKREI------KTDDNDNTP 314
Query: 682 IAQRMKKSPSSNSASINQNTLLKTASSSFK------KSNLTMNKKRDSKFSKSLKAPVGS 521
+AQR+K SS ++ + K+ +S+ K L N K +S+FSK+++ P GS
Sbjct: 315 LAQRLKMGESSKGKPPAKSIVKKSPASAKDIKKLKGKGKLKKNMK-NSQFSKTMRVPPGS 373
Query: 520 GGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQ 341
G +KWTTL+HNGVIFPP YKPHG+KMLY GQPVDLTPEQEEVATMFAVMKDTDYA K
Sbjct: 374 GEGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPT 433
Query: 340 FIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXX 161
FI NF DWR ILGKNHIIKKFE CDFTPIYEWHL+EKEKKKQMT+
Sbjct: 434 FIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREEKLKQE 493
Query: 160 XKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 494 EKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIG 545
>gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]
Length = 949
Score = 363 bits (931), Expect = 1e-97
Identities = 221/473 (46%), Positives = 268/473 (56%), Gaps = 36/473 (7%)
Frame = -3
Query: 1315 DDDKPLSHRHNSVSAIVQRKCSVDSEKAHTHSSVHKFEG-----------RSTEKMDLVD 1169
DDDKPL+ R + +K E A+ HK G ST K L+
Sbjct: 119 DDDKPLAFRKKPDMKL--KKVDTGGENAYGSEDDHKPLGMNINSAKVASNNSTNKTVLLK 176
Query: 1168 DPIIKSENSDDD-----KPLSVKYS---GVINRSA-----FSHAAEAPQXXXXXXXXXXX 1028
+K+ DDD KPL +++ G N S F A + Q
Sbjct: 177 TAPLKTLQPDDDSDDDHKPLVQRFNPAKGASNNSTSKPVLFKAAPKIVQSDDDSEDEKPL 236
Query: 1027 XXS-------NTSEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXX 869
+ T DSED KPL +RF G +SA +SN +K
Sbjct: 237 ASRLPTNAAPKSRASTSDSEDEKPLSARFSRGTAG-TSASISNSKDKLPSNNKGP----- 290
Query: 868 XGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDH 689
S ++AP+ KRP + N SS+ KKAK + S S VK +ESK DDN+
Sbjct: 291 ---SINSSAPRNSVKRPSDNNNNQTSSALKKAKSSDASASGSVK------RESKVDDNNS 341
Query: 688 TPIAQRMKKSPSSNSASINQNTLLKTASSSFKKSNLTMNKK-----RDSKFSKSLKAPVG 524
P+ +++ SS S +N ++K + S KK N K + S+FSKSL+ P G
Sbjct: 342 VPVERKLTPGESSKSKPPVKN-IVKKSPLSVKKDNKKFKTKTKKTMKSSQFSKSLRVPPG 400
Query: 523 SGGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKK 344
SGG +KW+TL+HNGVIFPP Y PHG+KMLY GQPV+LTPE+EEVATMFAVMKDT+YA KK
Sbjct: 401 SGGGKKWSTLEHNGVIFPPPYNPHGVKMLYNGQPVELTPEEEEVATMFAVMKDTEYAAKK 460
Query: 343 QFIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXX 164
FI NF DW+ ILGKNHIIKKFE CDFTPIYEWHL+EKEKKKQMTS
Sbjct: 461 TFIDNFFGDWKKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEERKALREEKLKQ 520
Query: 163 XXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
KYMWA+VDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 521 EEKYMWAVVDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG 573
>dbj|BAJ84827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 946
Score = 359 bits (921), Expect = 2e-96
Identities = 217/474 (45%), Positives = 274/474 (57%), Gaps = 37/474 (7%)
Frame = -3
Query: 1315 DDDKPLSHRHNSVSAIVQRKCSVDSEKAHTHSSVHKFEG-----------RSTEKMDLVD 1169
DDDKPL+ R + + +K E A+ HK G ST K LV
Sbjct: 118 DDDKPLAFRKKPDTKL--KKVVAGGENAYDSDDDHKPLGMNINSAKVASNNSTSKTVLVK 175
Query: 1168 DP---IIKSENSDDD-KPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNTSEE- 1004
+ ++SDDD KPL +++ + A S++ P + E+
Sbjct: 176 TAPKTVQPDDDSDDDHKPLGQRFNSA--KGASSNSTNKPVLLKSEPKIVQSDDDSEDEKP 233
Query: 1003 ----------------TDDSEDAKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXX 872
DSED KPL +RF G +S +SN +K
Sbjct: 234 LASRLPTNAASKSRGSASDSEDEKPLSARFSRGTAG-TSVSISNSKDK--------LPSN 284
Query: 871 XXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDND 692
G+++ ++AP+ KRP D N SS+ KK K + SVS VK +ESK+DD++
Sbjct: 285 NKGLNNNSSAPRNSVKRP-GDNNNQTSSALKKIKYSDVSVSGSVK------RESKDDDSN 337
Query: 691 HTPIAQRMKKSPSSNSASINQNTLLKTASSSFKKSNLTMNKK-----RDSKFSKSLKAPV 527
P+ +++ SS S +N ++K + S KK N K + S+FSKSL+ P
Sbjct: 338 SIPVERKLTLGESSKSKLPVKN-IVKKSPLSVKKDNKKFKTKTKKAMKSSQFSKSLREPP 396
Query: 526 GSGGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALK 347
GSGG +KW+TL+HNGVIFPPLY PHG+KMLY GQPV+LTP++EEVATMFAVMKDT+YA K
Sbjct: 397 GSGGGKKWSTLEHNGVIFPPLYDPHGVKMLYNGQPVELTPDEEEVATMFAVMKDTEYATK 456
Query: 346 KQFIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXX 167
K FI NF DW+ ILGKNHIIKKFE CDFTPI+EWHL+EKEKKKQMTS
Sbjct: 457 KTFIDNFFGDWKKILGKNHIIKKFELCDFTPIFEWHLREKEKKKQMTSEEKKALREEKLK 516
Query: 166 XXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
KYMWA+VDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 517 QEEKYMWAVVDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG 570
>ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella
trichopoda] gi|548861621|gb|ERN18992.1| hypothetical
protein AMTR_s00061p00026580, partial [Amborella
trichopoda]
Length = 595
Score = 357 bits (915), Expect = 8e-96
Identities = 222/442 (50%), Positives = 263/442 (59%), Gaps = 5/442 (1%)
Frame = -3
Query: 1315 DDDKPLSHRHNSVSAIVQRKCSVDSEKAHTHSSVHKFEGRSTEKMDLVDDPIIKSENSDD 1136
DDDKPL+ R +V+ V+ S + + + V K +S V+ ++SDD
Sbjct: 137 DDDKPLNSRVAAVAKTVRNNSSGPNLPLPSSAMVLKMSVKSP-----VNVVKRSPDDSDD 191
Query: 1135 DKPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNTSEETDDSEDAKPLLSRFQS 956
+KPLS K+ + A + + P DDS++ KPL+S+FQ
Sbjct: 192 EKPLSQKFPQKSSSGAVAGTSIKPAY-------------------DDSDEEKPLVSKFQQ 232
Query: 955 NVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSDANPAESSSSKK 776
N SS K NG I K A GE + L + K
Sbjct: 233 N---GSSKKNLNG----------ELSLKANHILKKRLA---GEPQML---------AKKP 267
Query: 775 AKLTGTSVSAKVKQEVSVSKESKE--DDNDHTPIAQRMKKSPS-SNSASINQ-NTLLKTA 608
T S S+KVK EV V E+ E DD D PI+QRMKKS S S AS + + K
Sbjct: 268 KPSTDPSPSSKVKIEVDVKAETSEKGDDEDDLPISQRMKKSASVSGQASAKKISVKTKVV 327
Query: 607 SSSFKKSNLTMNKK-RDSKFSKSLKAPVGSGGEQKWTTLQHNGVIFPPLYKPHGIKMLYK 431
SSSFKK+ K+ + K SKS K P GSG QKWTTL+HNGVIFPP YKPHG+KMLY
Sbjct: 328 SSSFKKTGKNTKKEIKKLKQSKSAKGPPGSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYN 387
Query: 430 GQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFMDDWRLILGKNHIIKKFEDCDFTPI 251
G PVDLTPEQEEVATMFAVMKDT+YA K +F++NFM+DWR+ILGKNHIIKKFE CD TPI
Sbjct: 388 GLPVDLTPEQEEVATMFAVMKDTEYATKPKFVENFMNDWRVILGKNHIIKKFELCDLTPI 447
Query: 250 YEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 71
YEWHLKEKEKKK M++ KYMWAIVDGVKEKVGNFRVEPPGLFRGRG
Sbjct: 448 YEWHLKEKEKKKHMSAEEKKALKEEKAKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 507
Query: 70 EHPKMGKLKNRIKPRDITINIG 5
EHPKMGKLK RI P+DITINIG
Sbjct: 508 EHPKMGKLKRRIFPKDITINIG 529
>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
Length = 733
Score = 357 bits (915), Expect = 8e-96
Identities = 206/406 (50%), Positives = 251/406 (61%), Gaps = 6/406 (1%)
Frame = -3
Query: 1204 EGRSTEKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXX 1025
EGRS K +P ++ DD PLS + G+ N+ + AP
Sbjct: 7 EGRSPIKG--TTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKT--- 61
Query: 1024 XSNTSEETDDSEDAKPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSK 851
+D +D PL +RF +SN G SS+++ + EK +
Sbjct: 62 --EVKVSAEDPDDEAPLSARFNVKSNT-GTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQ 118
Query: 850 TTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQR 671
++ G KRPL N ++ SS+KK K + + K KQ V+V E ++D+DH PIAQR
Sbjct: 119 NSSTLSG-KRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQ-VTVKAEKADEDDDHMPIAQR 176
Query: 670 MKKSPSSNS--ASINQNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKW 503
MKKS +SNS +S+ Q T K SSSFKK N K+ + SK+ KS K P SG G++KW
Sbjct: 177 MKKSTASNSKLSSMKQKTT-KVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKW 235
Query: 502 TTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFM 323
+TL HNGVIFP Y PHG+KMLY G+PVDLTPEQEEVATMFAVMKDTDY K QF KNF
Sbjct: 236 STLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFW 295
Query: 322 DDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWA 143
+DW +LGKNH IK + CDFTPIYEWHL+EKEKKKQM+S K+MWA
Sbjct: 296 EDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEKFMWA 355
Query: 142 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 356 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG 401
>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
isoform 3 [Theobroma cacao]
Length = 836
Score = 357 bits (915), Expect = 8e-96
Identities = 206/406 (50%), Positives = 251/406 (61%), Gaps = 6/406 (1%)
Frame = -3
Query: 1204 EGRSTEKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXX 1025
EGRS K +P ++ DD PLS + G+ N+ + AP
Sbjct: 134 EGRSPIKG--TTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKT--- 188
Query: 1024 XSNTSEETDDSEDAKPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSK 851
+D +D PL +RF +SN G SS+++ + EK +
Sbjct: 189 --EVKVSAEDPDDEAPLSARFNVKSNT-GTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQ 245
Query: 850 TTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQR 671
++ G KRPL N ++ SS+KK K + + K KQ V+V E ++D+DH PIAQR
Sbjct: 246 NSSTLSG-KRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQ-VTVKAEKADEDDDHMPIAQR 303
Query: 670 MKKSPSSNS--ASINQNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKW 503
MKKS +SNS +S+ Q T K SSSFKK N K+ + SK+ KS K P SG G++KW
Sbjct: 304 MKKSTASNSKLSSMKQKTT-KVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKW 362
Query: 502 TTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFM 323
+TL HNGVIFP Y PHG+KMLY G+PVDLTPEQEEVATMFAVMKDTDY K QF KNF
Sbjct: 363 STLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFW 422
Query: 322 DDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWA 143
+DW +LGKNH IK + CDFTPIYEWHL+EKEKKKQM+S K+MWA
Sbjct: 423 EDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEKFMWA 482
Query: 142 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 483 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG 528
>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao]
Length = 904
Score = 357 bits (915), Expect = 8e-96
Identities = 206/406 (50%), Positives = 251/406 (61%), Gaps = 6/406 (1%)
Frame = -3
Query: 1204 EGRSTEKMDLVDDPIIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXX 1025
EGRS K +P ++ DD PLS + G+ N+ + AP
Sbjct: 134 EGRSPIKG--TTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKT--- 188
Query: 1024 XSNTSEETDDSEDAKPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSK 851
+D +D PL +RF +SN G SS+++ + EK +
Sbjct: 189 --EVKVSAEDPDDEAPLSARFNVKSNT-GTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQ 245
Query: 850 TTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQR 671
++ G KRPL N ++ SS+KK K + + K KQ V+V E ++D+DH PIAQR
Sbjct: 246 NSSTLSG-KRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQ-VTVKAEKADEDDDHMPIAQR 303
Query: 670 MKKSPSSNS--ASINQNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKW 503
MKKS +SNS +S+ Q T K SSSFKK N K+ + SK+ KS K P SG G++KW
Sbjct: 304 MKKSTASNSKLSSMKQKTT-KVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKW 362
Query: 502 TTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFM 323
+TL HNGVIFP Y PHG+KMLY G+PVDLTPEQEEVATMFAVMKDTDY K QF KNF
Sbjct: 363 STLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFW 422
Query: 322 DDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWA 143
+DW +LGKNH IK + CDFTPIYEWHL+EKEKKKQM+S K+MWA
Sbjct: 423 EDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEKFMWA 482
Query: 142 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 483 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG 528
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 355 bits (911), Expect = 2e-95
Identities = 200/391 (51%), Positives = 248/391 (63%), Gaps = 5/391 (1%)
Frame = -3
Query: 1162 IIKSENSDDDKPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNTSEETDDSEDA 983
I+ E+S+DDKPLS + G N A A + +E D +D
Sbjct: 131 IVDDEDSEDDKPLSSRIKGSTNNVNKGVTAPA----------------HVKDEPSD-DDE 173
Query: 982 KPLLSRF--QSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTTAPKGGEKRPLSD 809
PL SRF +SN SS + + +P K++ KRP+ +
Sbjct: 174 VPLSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVP--TKRPMDN 231
Query: 808 ANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQRMKKSPSS-NSASIN 632
P+ SS+KK KL + KVKQ V+V E K DD+DH I+QRMKK+ SS N +S
Sbjct: 232 KVPSNHSSAKKPKLLDACTTTKVKQ-VTVKVEQKADDDDHLTISQRMKKADSSANKSSFA 290
Query: 631 QNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKWTTLQHNGVIFPPLYK 458
+ + K SSS KK+ K+ ++SK+SKS K GS G++KWTTL HNGVIFPP YK
Sbjct: 291 KKKVTKVVSSSLKKTTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYK 350
Query: 457 PHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFMDDWRLILGKNHIIKK 278
PHG+K+LYKG+P+DLTPEQEEVATMFAVMKDTDY K QF +NF +DWR +LGKNH+I+K
Sbjct: 351 PHGVKILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQK 410
Query: 277 FEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVE 98
+DCDF PIYEWH +EKEKKKQM++ KYMWAIV+GVKEKVGNFRVE
Sbjct: 411 LDDCDFNPIYEWHQQEKEKKKQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVE 470
Query: 97 PPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
PPGLFRGRGEHPKMGKLK+RI+P DITINIG
Sbjct: 471 PPGLFRGRGEHPKMGKLKSRIRPSDITINIG 501
>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|557555706|gb|ESR65720.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 824
Score = 353 bits (905), Expect = 1e-94
Identities = 205/406 (50%), Positives = 255/406 (62%), Gaps = 11/406 (2%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSD--DDKPLSVKYSGV---INRSAFSHAAEAPQXXXXXXXXXXXX 1025
+K ++ D +KS+++D DDKPLS + G +N+ + A+A
Sbjct: 136 KKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKADAA-----------IS 184
Query: 1024 XSNTSEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTT 845
N + +DS+D PL SRF + G S AK + EK +S+ T
Sbjct: 185 EVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGS----TSRET 240
Query: 844 APKGGE---KRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQ 674
K KRPL A+ + +SS+KK K++ TS KVKQ V+V E K DD+DH PI+Q
Sbjct: 241 QQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKADDDDHIPISQ 299
Query: 673 RMKKS-PSSNSASINQNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKW 503
RMK S PS + N K+ SSS KK N K ++S++SKS K GSG G++KW
Sbjct: 300 RMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKW 359
Query: 502 TTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFM 323
TTL HNGVIFPP Y PHG+KMLYKG+ V+LTPEQEEVATMFAVM DTDY K +F +NF
Sbjct: 360 TTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFW 419
Query: 322 DDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWA 143
+DWR +LGKNH+I+ E CDF PIY+WH ++KEKKKQM+S KYMWA
Sbjct: 420 NDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWA 479
Query: 142 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 480 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIG 525
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 353 bits (905), Expect = 1e-94
Identities = 205/406 (50%), Positives = 255/406 (62%), Gaps = 11/406 (2%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSD--DDKPLSVKYSGV---INRSAFSHAAEAPQXXXXXXXXXXXX 1025
+K ++ D +KS+++D DDKPLS + G +N+ + A+A
Sbjct: 136 KKEEIKDGNGLKSDDNDSEDDKPLSARLKGNTKNVNQGIGASKADAA-----------IS 184
Query: 1024 XSNTSEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTT 845
N + +DS+D PL SRF + G S AK + EK +S+ T
Sbjct: 185 EVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGS----TSRET 240
Query: 844 APKGGE---KRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQ 674
K KRPL A+ + +SS+KK K++ TS KVKQ V+V E K DD+DH PI+Q
Sbjct: 241 QQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKADDDDHIPISQ 299
Query: 673 RMKKS-PSSNSASINQNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKW 503
RMK S PS + N K+ SSS KK N K ++S++SKS K GSG G++KW
Sbjct: 300 RMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKW 359
Query: 502 TTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFM 323
TTL HNGVIFPP Y PHG+KMLYKG+ V+LTPEQEEVATMFAVM DTDY K +F +NF
Sbjct: 360 TTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFW 419
Query: 322 DDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWA 143
+DWR +LGKNH+I+ E CDF PIY+WH ++KEKKKQM+S KYMWA
Sbjct: 420 NDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWA 479
Query: 142 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 480 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIG 525
>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
topoisomerase I [Zea mays]
Length = 904
Score = 352 bits (902), Expect = 3e-94
Identities = 210/413 (50%), Positives = 248/413 (60%), Gaps = 18/413 (4%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSDDD-KPLSVKYSGVINRSAFSHAAEAPQXXXXXXXXXXXXXSNT 1013
+K+ VD + K+++SDDD KPL +K IN S S
Sbjct: 137 KKLKGVDTRVQKTDDSDDDDKPLGLK----INSSRMSS-------NRVNKPVLQRTVPKV 185
Query: 1012 SEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPE----------KPXXXXXXXXXXXXXG 863
+ +DS+D KPL SR SN S VS E K G
Sbjct: 186 EQPDEDSDDDKPLASRLPSNAGPKSGGDVSEDSEDEKPLAARFSKVAGSGNPKIASSSKG 245
Query: 862 ISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTP 683
++S T + KRPL +N SS+ KKAK + S SA V++E+ K DDN TP
Sbjct: 246 LTSDTNGQQSLGKRPLDSSNQT-SSALKKAKPSNVSASAIVRREI------KTDDN--TP 296
Query: 682 IAQRMKKSPSSNSASINQNTLLKTASSSFKKSNLTMNKK-------RDSKFSKSLKAPVG 524
+AQR+K SS S + ++ K + S KK M K ++S+FSK +K P G
Sbjct: 297 LAQRLKMGESSKGKS-SAKSVFKKSPVSVKKDIKKMKGKGKLKKNMKNSQFSKIMKVPPG 355
Query: 523 SGGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKK 344
SGG +KWTTL+HNGVIFPP YKPHG+KMLY G+PVDLTPEQEEVATMFAVMKDTDYA K
Sbjct: 356 SGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPVDLTPEQEEVATMFAVMKDTDYAAKP 415
Query: 343 QFIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXX 164
FI NF DWR +LGKNHIIK FE CDFTPIYEWHL+EKE+KKQMT+
Sbjct: 416 TFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYEWHLREKERKKQMTTEEKKTLREDNLKQ 475
Query: 163 XXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI P DITINIG
Sbjct: 476 EEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRILPSDITINIG 528
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 351 bits (900), Expect = 4e-94
Identities = 204/406 (50%), Positives = 254/406 (62%), Gaps = 11/406 (2%)
Frame = -3
Query: 1189 EKMDLVDDPIIKSENSD--DDKPLSVKYSGV---INRSAFSHAAEAPQXXXXXXXXXXXX 1025
+K ++ D +KS+++D DDKPLS + G +N+ + A+A
Sbjct: 136 KKEEIKDGNGLKSDDNDSEDDKPLSARLKGNSKNVNQGIGASKADAA-----------IS 184
Query: 1024 XSNTSEETDDSEDAKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXXXXXGISSKTT 845
N + +DS+D PL SRF + G S AK + EK +S+ T
Sbjct: 185 EVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGS----TSRET 240
Query: 844 APKGGE---KRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDNDHTPIAQ 674
K KRPL A+ + +SS+KK K++ TS KVKQ V+V E K DD+DH PI+Q
Sbjct: 241 QQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKADDDDHIPISQ 299
Query: 673 RMKKS-PSSNSASINQNTLLKTASSSFKKSNLTMNKK-RDSKFSKSLKAPVGSG-GEQKW 503
RMK S PS + N K+ SSS K N K ++S++SKS K GSG G++KW
Sbjct: 300 RMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKW 359
Query: 502 TTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKKQFIKNFM 323
TTL HNGVIFPP Y PHG+KMLYKG+ V+LTPEQEEVATMFAVM DTDY K +F +NF
Sbjct: 360 TTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFW 419
Query: 322 DDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXXXXKYMWA 143
+DWR +LGKNH+I+ E CDF PIY+WH ++KEKKKQM+S KYMWA
Sbjct: 420 NDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWA 479
Query: 142 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG
Sbjct: 480 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIG 525
>ref|XP_003573489.1| PREDICTED: DNA topoisomerase 1-like [Brachypodium distachyon]
Length = 900
Score = 350 bits (899), Expect = 6e-94
Identities = 207/413 (50%), Positives = 254/413 (61%), Gaps = 19/413 (4%)
Frame = -3
Query: 1186 KMDLVDDPIIKSENSDDD-KPLSVKY------SGVINRSAFSHAA---EAPQXXXXXXXX 1037
K+ V+ K+++SDDD KPLS+K S N++ A E P
Sbjct: 134 KLKKVETGSKKADDSDDDHKPLSLKINSAKVASNSANKAVLLKTAPKTEQPDDDSEDEKP 193
Query: 1036 XXXXXSNTSEE------TDDSEDAKPLLSRFQSNVIGVSSAKVSNGPEKPXXXXXXXXXX 875
N + +DDSED KPL +RF S + +SA VSN +K
Sbjct: 194 LASRLPNNAASKRRVNVSDDSEDEKPLSARF-SRLNAGASASVSNSKDKLLSNNKGP--- 249
Query: 874 XXXGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVKQEVSVSKESKEDDN 695
++ ++AP+ KRP D+N SS+ KKAK + T+ SA VK +ESK D+
Sbjct: 250 -----NNNSSAPRNSVKRPSDDSNQT-SSAPKKAKPSDTNASASVK------RESKADEV 297
Query: 694 DHTPIAQRMKKSPSSNSASINQNTLLKTASSSFKK-SNLTMNKK--RDSKFSKSLKAPVG 524
+ + K P + + ++K + SFKK +N NKK + S+FSKSL+ P G
Sbjct: 298 RRPTMGESSKSKPPAKN-------IVKKSPLSFKKDNNKNKNKKPMKSSQFSKSLRVPPG 350
Query: 523 SGGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFAVMKDTDYALKK 344
SGG +KW+TL+HNGVIFPP Y PHG+KMLY GQPV+LTP QEEVATMFAVMKDT+YA KK
Sbjct: 351 SGGGKKWSTLEHNGVIFPPPYSPHGVKMLYNGQPVELTPAQEEVATMFAVMKDTEYATKK 410
Query: 343 QFIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSXXXXXXXXXXXXX 164
FI NF DWR ILGKNH+IKKFE CDFTPIYEWHL+EKEKKKQMTS
Sbjct: 411 TFIDNFFGDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALREEKLKQ 470
Query: 163 XXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIKPRDITINIG 5
K+MWA+VDG +EKVGNFRVEPPGLFRGRGEHPKMGKLK RI P DITINIG
Sbjct: 471 EEKFMWAVVDGTREKVGNFRVEPPGLFRGRGEHPKMGKLKRRILPSDITINIG 523