BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00019280
         (562 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX97062.1| Pseudouridine synthase family protein isoform 4 [...   257   2e-66
gb|EOX97060.1| Pseudouridine synthase family protein isoform 2 [...   257   2e-66
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   257   2e-66
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   251   1e-64
ref|XP_006858556.1| hypothetical protein AMTR_s00071p00170380 [A...   244   1e-62
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   243   2e-62
ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like ...   239   4e-61
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   239   4e-61
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   238   6e-61
ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like ...   238   1e-60
ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [S...   238   1e-60
ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group] g...   236   2e-60
gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indi...   236   4e-60
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ...   235   5e-60
ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-lik...   234   8e-60
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   233   2e-59
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   233   2e-59
ref|XP_004485454.1| PREDICTED: tRNA pseudouridine synthase A-lik...   233   3e-59
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   233   3e-59
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   232   5e-59

>gb|EOX97062.1| Pseudouridine synthase family protein isoform 4 [Theobroma cacao]
          Length = 341

 Score =  257 bits (656), Expect = 2e-66
 Identities = 125/176 (71%), Positives = 144/176 (81%), Gaps = 9/176 (5%)
 Frame = +3

Query: 57  SKEPKRPLDSPSESLKPPK---------QQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIG 209
           S+ PK  L +  ES +P K         Q+  EE+  +    MS N + QRYL+A+EYIG
Sbjct: 2   SENPKHSLSTTPESSRPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIEYIG 61

Query: 210 TRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKR 389
           TRFSGSQ+QPNCRTVVG+LEEAF KFIGQPVS+ CSSRTDAGVHALSNVCHVDVERISKR
Sbjct: 62  TRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR 121

Query: 390 KPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           KPGEVLPPHEPSVVRRA+NHFLQK EGDI+++DVRCVP+DFHAR+KA ERTY+YRL
Sbjct: 122 KPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPNDFHARYKAQERTYFYRL 177


>gb|EOX97060.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 345

 Score =  257 bits (656), Expect = 2e-66
 Identities = 125/176 (71%), Positives = 144/176 (81%), Gaps = 9/176 (5%)
 Frame = +3

Query: 57  SKEPKRPLDSPSESLKPPK---------QQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIG 209
           S+ PK  L +  ES +P K         Q+  EE+  +    MS N + QRYL+A+EYIG
Sbjct: 2   SENPKHSLSTTPESSRPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIEYIG 61

Query: 210 TRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKR 389
           TRFSGSQ+QPNCRTVVG+LEEAF KFIGQPVS+ CSSRTDAGVHALSNVCHVDVERISKR
Sbjct: 62  TRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR 121

Query: 390 KPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           KPGEVLPPHEPSVVRRA+NHFLQK EGDI+++DVRCVP+DFHAR+KA ERTY+YRL
Sbjct: 122 KPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPNDFHARYKAQERTYFYRL 177


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  257 bits (656), Expect = 2e-66
 Identities = 125/176 (71%), Positives = 144/176 (81%), Gaps = 9/176 (5%)
 Frame = +3

Query: 57  SKEPKRPLDSPSESLKPPK---------QQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIG 209
           S+ PK  L +  ES +P K         Q+  EE+  +    MS N + QRYL+A+EYIG
Sbjct: 2   SENPKHSLSTTPESSRPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIEYIG 61

Query: 210 TRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKR 389
           TRFSGSQ+QPNCRTVVG+LEEAF KFIGQPVS+ CSSRTDAGVHALSNVCHVDVERISKR
Sbjct: 62  TRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR 121

Query: 390 KPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           KPGEVLPPHEPSVVRRA+NHFLQK EGDI+++DVRCVP+DFHAR+KA ERTY+YRL
Sbjct: 122 KPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPNDFHARYKAQERTYFYRL 177


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  251 bits (640), Expect = 1e-64
 Identities = 124/176 (70%), Positives = 143/176 (81%), Gaps = 9/176 (5%)
 Frame = +3

Query: 57  SKEPKRPLDSPSESLKPPK---------QQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIG 209
           S+ PK  L +  ES +P K         Q+  EE+  +    MS N + QRYL+A+EYIG
Sbjct: 2   SENPKHSLSTTPESSRPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIEYIG 61

Query: 210 TRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKR 389
           TRFSGSQ+QPNCRTVVG+LEEAF KFIGQPVS+ CSSRTDAGVHALSNVCHVDVERISKR
Sbjct: 62  TRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR 121

Query: 390 KPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           KPGEVLPPHEPSVVRRA+NHFLQ  EGDI+++DVRCVP+DFHAR+KA ERTY+YRL
Sbjct: 122 KPGEVLPPHEPSVVRRAVNHFLQS-EGDITVIDVRCVPNDFHARYKAQERTYFYRL 176


>ref|XP_006858556.1| hypothetical protein AMTR_s00071p00170380 [Amborella trichopoda]
           gi|548862665|gb|ERN20023.1| hypothetical protein
           AMTR_s00071p00170380 [Amborella trichopoda]
          Length = 367

 Score =  244 bits (623), Expect = 1e-62
 Identities = 119/172 (69%), Positives = 139/172 (80%), Gaps = 7/172 (4%)
 Frame = +3

Query: 63  EPKRPLDSPSESLKPPKQQRSEEEAGEGGDG-------MSHNSKAQRYLIAVEYIGTRFS 221
           + KR LDSP+ + K PK  +S+EE  EG +        M+ N + QRYL+A+EYIGTRFS
Sbjct: 9   QTKRTLDSPAHNSKAPKISKSQEEEDEGEEEAEYCREKMTENPRVQRYLVALEYIGTRFS 68

Query: 222 GSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKRKPGE 401
           GSQ+QPNCRTV+G LEEAFHKFIGQPVS+  SSRTDAGVHALSNVCHVDVERISKRKP E
Sbjct: 69  GSQKQPNCRTVMGALEEAFHKFIGQPVSIAFSSRTDAGVHALSNVCHVDVERISKRKPNE 128

Query: 402 VLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           +LPPHEP VV+RA+NHFLQK  GD+ ++DVR VP DFHARF A ERTY+YRL
Sbjct: 129 LLPPHEPGVVKRAVNHFLQKDGGDMMVIDVRFVPPDFHARFMAQERTYFYRL 180


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  243 bits (620), Expect = 2e-62
 Identities = 119/174 (68%), Positives = 138/174 (79%), Gaps = 7/174 (4%)
 Frame = +3

Query: 57  SKEPKRPLDSPSESLKPPKQQRSEEEAGEG-------GDGMSHNSKAQRYLIAVEYIGTR 215
           S  PK  L+  SES + P +    ++  +G          M+ N + QRYL+AVEYIGTR
Sbjct: 15  SDSPKHLLNRRSESPQRPSKIARTDDLSDGEQQDSVASKTMTQNPRVQRYLVAVEYIGTR 74

Query: 216 FSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKRKP 395
           FSGSQ+Q NCRTV G L+EAFHKFIGQPVS+ CSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 75  FSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKP 134

Query: 396 GEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           GEVLPPHEP+VVRRA+NHFLQK EGD+ ++DVRCVP DFHAR+KA ERTY+YRL
Sbjct: 135 GEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKARERTYFYRL 188


>ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Setaria
           italica]
          Length = 385

 Score =  239 bits (609), Expect = 4e-61
 Identities = 121/186 (65%), Positives = 140/186 (75%), Gaps = 17/186 (9%)
 Frame = +3

Query: 51  NSSKEPKRPLD-SPSESLKPPKQQRSEEEAGEGGDGMS----------------HNSKAQ 179
           N +   KRP D S ++   P K QRS +      DG++                 N +AQ
Sbjct: 5   NPAASAKRPCDPSLADPTPPAKLQRSSDPPDPAPDGITGGGEAAGVESEAMAGVRNPRAQ 64

Query: 180 RYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVC 359
           RYL+AVEY+GTRFSGSQ+QPN RTVVG+LEEAFHKFIGQPVS+ CSSRTDAGVHALSN+C
Sbjct: 65  RYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGVHALSNIC 124

Query: 360 HVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALER 539
           HVDVERISKRKPGEVL PHEP VV+RA+NHFLQ+ EGDI + DVRCV  DFHAR+KALER
Sbjct: 125 HVDVERISKRKPGEVLTPHEPGVVKRAVNHFLQRNEGDIMVTDVRCVAPDFHARYKALER 184

Query: 540 TYYYRL 557
           TY+YRL
Sbjct: 185 TYHYRL 190


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 350

 Score =  239 bits (609), Expect = 4e-61
 Identities = 121/168 (72%), Positives = 138/168 (82%), Gaps = 1/168 (0%)
 Frame = +3

Query: 57  SKEPKRPLDSPSESLK-PPKQQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIGTRFSGSQR 233
           S+  K  L+S S+S K P K  ++  E  E  + MS     QRYLIA+EYIGTRFSGSQ+
Sbjct: 2   SENLKHSLESRSQSPKRPSKISKTTSEEAEA-ESMSKPQGIQRYLIAIEYIGTRFSGSQQ 60

Query: 234 QPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPP 413
           Q NCRTVVG+LEEAF KFIGQPVS+ CSSRTDAGVHALSNVCHVD+ERISKRKPGEVLPP
Sbjct: 61  QSNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPP 120

Query: 414 HEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           HEP VV+RA+NHFLQK EGD+ +VDVR VP+DFHARFKA ERTY+YRL
Sbjct: 121 HEPIVVQRAVNHFLQKNEGDVMVVDVRSVPADFHARFKAQERTYFYRL 168


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
           tuberosum]
          Length = 389

 Score =  238 bits (608), Expect = 6e-61
 Identities = 123/190 (64%), Positives = 143/190 (75%), Gaps = 8/190 (4%)
 Frame = +3

Query: 12  DDSSDLCSATPSLNSSKEPKRPLDSPSESLKPPKQQ--------RSEEEAGEGGDGMSHN 167
           D S  L S T   N     +RP +SP    K PK            EE+       M+ N
Sbjct: 4   DQSQPLISET---NKHSLDQRP-ESPQRPSKFPKVNDDAGNDVLEGEEQKESVTRTMNPN 59

Query: 168 SKAQRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHAL 347
            + QRYLIA+EYIGTRF+G+Q+QPNCRTVVG+L+EAF KF+GQPVSV CSSRTDAGVHAL
Sbjct: 60  PRLQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSRTDAGVHAL 119

Query: 348 SNVCHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFK 527
           SNVCHVDVERISKRKPG+VLPPHEP VV+RA+NHFLQK EGDI ++DVRCVP+DFHAR+K
Sbjct: 120 SNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVPADFHARYK 179

Query: 528 ALERTYYYRL 557
           A ERTY+YRL
Sbjct: 180 AQERTYFYRL 189


>ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Oryza
           brachyantha]
          Length = 397

 Score =  238 bits (606), Expect = 1e-60
 Identities = 125/190 (65%), Positives = 140/190 (73%), Gaps = 8/190 (4%)
 Frame = +3

Query: 12  DDSSDLCSATPSLNSSKEP-KRPLDSPSESLKPPKQQRSEE-EAGEGGDGMSH------N 167
           D +S      PSL     P K P  S  +    P + R +    GE  +G         N
Sbjct: 14  DSASSKRPIGPSLAEPSPPAKVPRSSQPDPCPSPAEARGDAANGGEVAEGSREEMAGAWN 73

Query: 168 SKAQRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHAL 347
            +AQRYL+AVEYIGTRFSGSQ+QPN RTVVG+LEEAFHKFIGQPVS+ CSSRTDAGVHAL
Sbjct: 74  PRAQRYLVAVEYIGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGVHAL 133

Query: 348 SNVCHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFK 527
           SNVCHVDVERISKRKPGEVLPPHEP VV+RA+NHFLQK EGDI + DV CV  DFHAR+K
Sbjct: 134 SNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDVCCVAPDFHARYK 193

Query: 528 ALERTYYYRL 557
           ALERTY+YRL
Sbjct: 194 ALERTYHYRL 203


>ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [Sorghum bicolor]
           gi|241942657|gb|EES15802.1| hypothetical protein
           SORBIDRAFT_08g005650 [Sorghum bicolor]
          Length = 387

 Score =  238 bits (606), Expect = 1e-60
 Identities = 128/197 (64%), Positives = 145/197 (73%), Gaps = 14/197 (7%)
 Frame = +3

Query: 9   MDDSSDLCSATPSLNSSKEPKRP-LDSPSESLK-----------PPKQQRSEEEAGEGGD 152
           M DS+   +A     SSK P  P LD P+ S K           P  +     E GE  +
Sbjct: 1   MSDSNPAAAA-----SSKRPCDPSLDDPTPSAKLQRSSEPSDPTPAVKPNGGAETGEESE 55

Query: 153 GMS--HNSKAQRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRT 326
            M+   N +AQRYL+AVEYIGTRFSGSQ+QPN RTVVG+LEEAFH+FIGQPVS+ CSSRT
Sbjct: 56  VMAGARNPRAQRYLVAVEYIGTRFSGSQQQPNQRTVVGVLEEAFHRFIGQPVSIFCSSRT 115

Query: 327 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPS 506
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV+RA+NHFL K EGDI + DVRCV  
Sbjct: 116 DAGVHALSNVCHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLLKNEGDIMVTDVRCVAP 175

Query: 507 DFHARFKALERTYYYRL 557
           DFHAR+KALERTY+YRL
Sbjct: 176 DFHARYKALERTYHYRL 192


>ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group]
           gi|108862288|gb|ABA96079.2| tRNA pseudouridine synthase
           family protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113648859|dbj|BAF29371.1|
           Os12g0194800 [Oryza sativa Japonica Group]
           gi|215678805|dbj|BAG95242.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222616774|gb|EEE52906.1| hypothetical protein
           OsJ_35509 [Oryza sativa Japonica Group]
          Length = 391

 Score =  236 bits (603), Expect = 2e-60
 Identities = 125/199 (62%), Positives = 146/199 (73%), Gaps = 22/199 (11%)
 Frame = +3

Query: 27  LCSATPSLNSSKEPKRPLD------SPSESLK---PPKQQRSEEEAGEGGDGM------- 158
           + +ATP  +S+   KRP+D      SP+  L+   PP      E  G+  DG        
Sbjct: 1   MSAATP--DSAAAAKRPIDPSHADPSPAAKLQRSSPPDPSPPAEAQGDATDGGGEVAGVR 58

Query: 159 ------SHNSKAQRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSS 320
                 + N +AQRYL+AVEY+GTRFSGSQ+Q N RTVVG+LEEAFHKFIGQPVS+ CSS
Sbjct: 59  SGEMAGARNPQAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSS 118

Query: 321 RTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCV 500
           RTD GVHALSNVCHVDVERISKRKPGE+LPPHEP VV+RA+NHFLQK EGDI + DVRCV
Sbjct: 119 RTDTGVHALSNVCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCV 178

Query: 501 PSDFHARFKALERTYYYRL 557
             DFHAR+KALERTY+YRL
Sbjct: 179 APDFHARYKALERTYHYRL 197


>gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indica Group]
          Length = 391

 Score =  236 bits (601), Expect = 4e-60
 Identities = 125/199 (62%), Positives = 146/199 (73%), Gaps = 22/199 (11%)
 Frame = +3

Query: 27  LCSATPSLNSSKEPKRPLD------SPSESLK---PPKQQRSEEEAGEGGDGM------- 158
           + +ATP  +S+   KRP+D      SP+  L+   PP      E  G+  DG        
Sbjct: 1   MSAATP--DSAAAAKRPIDPSHADPSPAAKLQRSSPPDPSPPAEAQGDTTDGGGEVAGVR 58

Query: 159 ------SHNSKAQRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSS 320
                 + N +AQRYL+AVEY+GTRFSGSQ+Q N RTVVG+LEEAFHKFIGQPVS+ CSS
Sbjct: 59  SGEMAGARNPQAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSS 118

Query: 321 RTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCV 500
           RTD GVHALSNVCHVDVERISKRKPGE+LPPHEP VV+RA+NHFLQK EGDI + DVRCV
Sbjct: 119 RTDTGVHALSNVCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCV 178

Query: 501 PSDFHARFKALERTYYYRL 557
             DFHAR+KALERTY+YRL
Sbjct: 179 APDFHARYKALERTYHYRL 197


>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1
           [Citrus sinensis]
          Length = 383

 Score =  235 bits (600), Expect = 5e-60
 Identities = 112/134 (83%), Positives = 123/134 (91%)
 Frame = +3

Query: 156 MSHNSKAQRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAG 335
           MS N + QRYLIAVEYIGTRFSGSQ+Q NCRTVVG+LEEAFHKFIGQPVS++ SSRTDAG
Sbjct: 51  MSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAG 110

Query: 336 VHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFH 515
           VHA SNVCHVDVERISKRKPGEVLPPH+ SVVRRA+NHFLQK EGDI + DVRCVPSDFH
Sbjct: 111 VHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSEGDIMVTDVRCVPSDFH 170

Query: 516 ARFKALERTYYYRL 557
           ARF+A ERTY+YR+
Sbjct: 171 ARFRAQERTYFYRI 184


>ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-like [Brachypodium
           distachyon]
          Length = 386

 Score =  234 bits (598), Expect = 8e-60
 Identities = 123/187 (65%), Positives = 141/187 (75%), Gaps = 16/187 (8%)
 Frame = +3

Query: 45  SLNSSKEPKRPLD-SPSESLKPPKQQRS--------EEEAGEGGDGMSHNSKA------- 176
           S +S+   KRP D S ++   P K QRS        E+  G G  G    + A       
Sbjct: 5   SSDSAAASKRPFDPSLADPSLPSKLQRSSHPDISPAEKPEGVGAAGPESEAMAAARVPRG 64

Query: 177 QRYLIAVEYIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNV 356
           QRYL+AVEY GTRF GSQ+QP+ RTVVG+LEEAFHKF+GQPVSV CSSRTDAGVHALSNV
Sbjct: 65  QRYLVAVEYAGTRFCGSQQQPDQRTVVGVLEEAFHKFVGQPVSVFCSSRTDAGVHALSNV 124

Query: 357 CHVDVERISKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALE 536
           CHVDVERISKRKPGEVLPPH+P VV+RA+NHFLQK EGDI + DVRCVP DFHAR+KALE
Sbjct: 125 CHVDVERISKRKPGEVLPPHDPGVVKRAVNHFLQKNEGDIMVTDVRCVPPDFHARYKALE 184

Query: 537 RTYYYRL 557
           RTY+YR+
Sbjct: 185 RTYHYRI 191


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
           lycopersicum]
          Length = 389

 Score =  233 bits (595), Expect = 2e-59
 Identities = 117/177 (66%), Positives = 136/177 (76%), Gaps = 8/177 (4%)
 Frame = +3

Query: 51  NSSKEPKRPLDSPSESLKPPKQQ--------RSEEEAGEGGDGMSHNSKAQRYLIAVEYI 206
           N     +RP +SP    K PK            EE+       M+ N + QRYL+A+EYI
Sbjct: 14  NKHSLDQRP-ESPQRPSKLPKVNDDGGNDVVEGEEQKESVTRTMNPNPRLQRYLLAIEYI 72

Query: 207 GTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISK 386
           GTRF+G+Q+QPNCRTVVG+L+EAF KFIGQPVSV CSSRTDAGVHALSNVCHVDVERISK
Sbjct: 73  GTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISK 132

Query: 387 RKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           RKPG+VLPPHEP VV+RA+NHFLQK  GDI ++DVRCVP DFHAR+KA ERTY+YRL
Sbjct: 133 RKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDVRCVPDDFHARYKAQERTYFYRL 189


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  233 bits (594), Expect = 2e-59
 Identities = 123/178 (69%), Positives = 139/178 (78%), Gaps = 12/178 (6%)
 Frame = +3

Query: 57  SKEPKRPLDS-----PSESLKPPK----QQRSEEEAGEGG---DGMSHNSKAQRYLIAVE 200
           ++ PK  LD+     PS+ LK        +  EEE  E     + MS N K QRYLIAVE
Sbjct: 2   TENPKHSLDTESRNRPSKILKTQDFVDDNEEGEEELQESSFVAESMSSNPKLQRYLIAVE 61

Query: 201 YIGTRFSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERI 380
           YIGT+F+GSQ+Q N RTVVG+LEEAF KFIGQ VSV+ SSRTDAGVHALSNVCHVD+ERI
Sbjct: 62  YIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALSNVCHVDIERI 121

Query: 381 SKRKPGEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYR 554
           SKRKPGEVLPPHEP+VVRRA+NHFLQK EGDI + DVRCVPSDFHARFKA ERTY+YR
Sbjct: 122 SKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKAQERTYFYR 179


>ref|XP_004485454.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X2 [Cicer
           arietinum]
          Length = 343

 Score =  233 bits (593), Expect = 3e-59
 Identities = 115/174 (66%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
 Frame = +3

Query: 39  TPSLNSSKEPKRPLD-SPSESLKPPKQQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIGTR 215
           T  ++   +  RP   S  E   P      +EE  E  +GM+ + + QRYL+A+EYIGT 
Sbjct: 8   TVEIDECSDNNRPSKISKIEYPNPSYHDGEQEEEEEQKEGMNQHRRIQRYLVAIEYIGTH 67

Query: 216 FSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKRKP 395
           FSGSQ+Q   RTVVG+LEEAF KF+GQPVSV CSSRTDAGVHALSNVCHVD+ERISKRKP
Sbjct: 68  FSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALSNVCHVDIERISKRKP 127

Query: 396 GEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           GEVLPPHEP VVRRA+NHFLQK  GD+ ++DVRCVPSDFHAR+KA ERTY+YRL
Sbjct: 128 GEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKAQERTYFYRL 181


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
           arietinum]
          Length = 374

 Score =  233 bits (593), Expect = 3e-59
 Identities = 115/174 (66%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
 Frame = +3

Query: 39  TPSLNSSKEPKRPLD-SPSESLKPPKQQRSEEEAGEGGDGMSHNSKAQRYLIAVEYIGTR 215
           T  ++   +  RP   S  E   P      +EE  E  +GM+ + + QRYL+A+EYIGT 
Sbjct: 8   TVEIDECSDNNRPSKISKIEYPNPSYHDGEQEEEEEQKEGMNQHRRIQRYLVAIEYIGTH 67

Query: 216 FSGSQRQPNCRTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKRKP 395
           FSGSQ+Q   RTVVG+LEEAF KF+GQPVSV CSSRTDAGVHALSNVCHVD+ERISKRKP
Sbjct: 68  FSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALSNVCHVDIERISKRKP 127

Query: 396 GEVLPPHEPSVVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           GEVLPPHEP VVRRA+NHFLQK  GD+ ++DVRCVPSDFHAR+KA ERTY+YRL
Sbjct: 128 GEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKAQERTYFYRL 181


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  232 bits (591), Expect = 5e-59
 Identities = 116/164 (70%), Positives = 132/164 (80%), Gaps = 4/164 (2%)
 Frame = +3

Query: 78  LDSPSESLKPPKQQRSEEEAGEG----GDGMSHNSKAQRYLIAVEYIGTRFSGSQRQPNC 245
           L   S S +P K  ++ +E   G     + M+     QRYL+AVEYIGTRF GSQ+QPNC
Sbjct: 11  LSIDSSSQRPLKIGKTTDELFHGDEEEAETMNPKPGIQRYLVAVEYIGTRFYGSQQQPNC 70

Query: 246 RTVVGLLEEAFHKFIGQPVSVTCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPS 425
           RTVVG LEEAF KFIGQPVSV CSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP 
Sbjct: 71  RTVVGALEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPG 130

Query: 426 VVRRAMNHFLQKCEGDISIVDVRCVPSDFHARFKALERTYYYRL 557
           VV +A+NHFLQK EGD+++VDVR VP+DFHAR+KA ERTY+YRL
Sbjct: 131 VVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRL 174