BLASTX nr result
ID: Zingiber25_contig00018975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00018975
(423 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ86992.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 4e-09
ref|XP_004956731.1| PREDICTED: U-box domain-containing protein 3... 60 3e-08
dbj|BAD37863.1| arm repeat-containing protein-like [Oryza sativa... 63 4e-08
ref|XP_003564022.1| PREDICTED: U-box domain-containing protein 3... 63 4e-08
ref|XP_002462331.1| hypothetical protein SORBIDRAFT_02g023920 [S... 59 4e-08
tpg|DAA40011.1| TPA: putative ARM repeat-containing protein cont... 62 8e-08
gb|AFW85193.1| putative ARM repeat-containing protein containing... 61 1e-07
ref|XP_004965101.1| PREDICTED: U-box domain-containing protein 3... 61 2e-07
ref|NP_001063073.1| Os09g0386200 [Oryza sativa Japonica Group] g... 57 3e-07
gb|EEC84515.1| hypothetical protein OsI_31222 [Oryza sativa Indi... 57 3e-07
gb|EEE69627.1| hypothetical protein OsJ_29215 [Oryza sativa Japo... 57 3e-07
ref|XP_003578071.1| PREDICTED: U-box domain-containing protein 4... 60 3e-07
ref|NP_001147513.1| LOC100281122 [Zea mays] gi|195611900|gb|ACG2... 60 4e-07
dbj|BAJ95293.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 7e-07
ref|NP_001057254.1| Os06g0238000 [Oryza sativa Japonica Group] g... 57 2e-06
gb|EAY89116.1| hypothetical protein OsI_10607 [Oryza sativa Indi... 57 2e-06
ref|NP_001147466.1| ubiquitin-protein ligase [Zea mays] gi|19561... 53 3e-06
ref|XP_002436775.1| hypothetical protein SORBIDRAFT_10g008610 [S... 56 6e-06
>dbj|BAJ86992.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 64.3 bits (155), Expect(2) = 4e-09
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +3
Query: 12 DAAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGN-GDVRRRMATKTL 179
D A +EE CVA +Y +SR RF GLARAAGA++ L RVAE G G VRR MA KTL
Sbjct: 410 DVAELEEWCVAAIYALSRGSLRFRGLARAAGADKALRRVAEEGTPGGVRREMARKTL 466
Score = 21.9 bits (45), Expect(2) = 4e-09
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 233 SDGLVSFRLDNTAAGDGSHNKSAPF 307
SDGL+SFR G S +A F
Sbjct: 498 SDGLMSFRRRQREVGASSCGNTAEF 522
>ref|XP_004956731.1| PREDICTED: U-box domain-containing protein 39-like [Setaria
italica]
Length = 566
Score = 59.7 bits (143), Expect(2) = 3e-08
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
A +EE CV+ +Y MSR RF GLARAAGA++ L RV G VRR MA KTL
Sbjct: 454 ADLEEWCVSAMYAMSRGSLRFRGLARAAGADRALRRVVADEGGGVRREMARKTL 507
Score = 23.9 bits (50), Expect(2) = 3e-08
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 158 KDG-YEDTXXXXXXTGSTADGNSRANSDGLVSFRLDNTAAGDGSHNKSAPF 307
+DG Y D G D SDGL+SFR G S +A F
Sbjct: 516 EDGEYNDLTGSSLECGDGEDCGGSIVSDGLMSFRRRQRELGVSSCGNTAEF 566
>dbj|BAD37863.1| arm repeat-containing protein-like [Oryza sativa Japonica Group]
gi|51535815|dbj|BAD37900.1| arm repeat-containing
protein-like [Oryza sativa Japonica Group]
gi|125542978|gb|EAY89117.1| hypothetical protein
OsI_10608 [Oryza sativa Indica Group]
Length = 491
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +3
Query: 27 EEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
EE+C++ L+GMSR RF GLARAAGA ++L RVAEG G VRR +A +TL
Sbjct: 367 EEYCLSALHGMSRGNVRFGGLARAAGAGEVLRRVAEGPGGGVRRDVAWRTL 417
>ref|XP_003564022.1| PREDICTED: U-box domain-containing protein 38-like [Brachypodium
distachyon]
Length = 535
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +3
Query: 3 MRSDAAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
+ + +A EE+C++ LYGMSR RF GLARAAG E LM VAEGG G V R MA +TL
Sbjct: 419 LAAPGSAEEEYCISALYGMSRGSLRFRGLARAAGVEAALMPVAEGGGG-VGRDMARRTL 476
>ref|XP_002462331.1| hypothetical protein SORBIDRAFT_02g023920 [Sorghum bicolor]
gi|241925708|gb|EER98852.1| hypothetical protein
SORBIDRAFT_02g023920 [Sorghum bicolor]
Length = 566
Score = 59.3 bits (142), Expect(2) = 4e-08
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
A +EE CV+ +Y MSR RF GLARAAGA++ L RV G VRR MA KTL
Sbjct: 451 ADLEEWCVSAMYAMSRGSLRFRGLARAAGADRALRRVVAEEGGGVRREMARKTL 504
Score = 23.5 bits (49), Expect(2) = 4e-08
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 167 YEDTXXXXXXTGSTADGNSRANSDGLVSFRLDNTAAGDGSHNKSAPF 307
Y D G D SDGL+SFR G S +A F
Sbjct: 520 YNDLTGSSAECGDGEDCGGSIVSDGLMSFRRRQRELGVSSCGNTAEF 566
>tpg|DAA40011.1| TPA: putative ARM repeat-containing protein containing family
protein [Zea mays]
Length = 533
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = +3
Query: 15 AAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
AA +EE CV+ +Y MSR RF GLARAAGA++ L RV G VRR MA KTL
Sbjct: 424 AAGLEEWCVSAMYAMSRGSLRFRGLARAAGADRALRRVVADEGGGVRREMARKTL 478
>gb|AFW85193.1| putative ARM repeat-containing protein containing family protein
[Zea mays]
Length = 508
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +3
Query: 27 EEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
EE+C++ LYGMSR RF GLARAAG E L VAEGG G VRR +A +TL
Sbjct: 403 EEYCISTLYGMSRGSMRFRGLARAAGVEAALQPVAEGGGG-VRRDLARRTL 452
>ref|XP_004965101.1| PREDICTED: U-box domain-containing protein 39-like [Setaria
italica]
Length = 524
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
+A EE+C++ LYGMSR RF GLARAAG E L VAEGG G V R MA +TL
Sbjct: 417 SAEEEYCISTLYGMSRGSMRFRGLARAAGVEAALQPVAEGGGG-VGRDMARRTL 469
>ref|NP_001063073.1| Os09g0386200 [Oryza sativa Japonica Group]
gi|49387716|dbj|BAD26106.1| arm repeat-containing
protein-like [Oryza sativa Japonica Group]
gi|113631306|dbj|BAF24987.1| Os09g0386200 [Oryza sativa
Japonica Group]
Length = 547
Score = 57.0 bits (136), Expect(2) = 3e-07
Identities = 33/56 (58%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 15 AAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEG-GNGDVRRRMATKTL 179
+A ++E CVA +Y MSR RF GLARAAGA+ L RVAE G VRR MA KTL
Sbjct: 436 SAELDEWCVAAMYAMSRGSLRFRGLARAAGADAALRRVAEECAPGIVRRDMARKTL 491
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = +2
Query: 197 TGST---ADGNSRANS---DGLVSFRLDNTAAGDGSHNKSAPF 307
TGS+ DG+ A S DGL+SFR G S +A F
Sbjct: 505 TGSSLECGDGDDCAGSIVSDGLMSFRRRQRELGSSSCGNTAEF 547
>gb|EEC84515.1| hypothetical protein OsI_31222 [Oryza sativa Indica Group]
Length = 547
Score = 57.0 bits (136), Expect(2) = 3e-07
Identities = 33/56 (58%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 15 AAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEG-GNGDVRRRMATKTL 179
+A ++E CVA +Y MSR RF GLARAAGA+ L RVAE G VRR MA KTL
Sbjct: 436 SAELDEWCVAAMYAMSRGSLRFRGLARAAGADAALRRVAEECAPGIVRRDMARKTL 491
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = +2
Query: 197 TGST---ADGNSRANS---DGLVSFRLDNTAAGDGSHNKSAPF 307
TGS+ DG+ A S DGL+SFR G S +A F
Sbjct: 505 TGSSLECGDGDDCAGSIVSDGLMSFRRRQRELGSSSCGNTAEF 547
>gb|EEE69627.1| hypothetical protein OsJ_29215 [Oryza sativa Japonica Group]
Length = 470
Score = 57.0 bits (136), Expect(2) = 3e-07
Identities = 33/56 (58%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 15 AAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEG-GNGDVRRRMATKTL 179
+A ++E CVA +Y MSR RF GLARAAGA+ L RVAE G VRR MA KTL
Sbjct: 359 SAELDEWCVAAMYAMSRGSLRFRGLARAAGADAALRRVAEECAPGIVRRDMARKTL 414
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = +2
Query: 197 TGST---ADGNSRANS---DGLVSFRLDNTAAGDGSHNKSAPF 307
TGS+ DG+ A S DGL+SFR G S +A F
Sbjct: 428 TGSSLECGDGDDCAGSIVSDGLMSFRRRQRELGSSSCGNTAEF 470
>ref|XP_003578071.1| PREDICTED: U-box domain-containing protein 40-like [Brachypodium
distachyon]
Length = 557
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVA-EGGNGDVRRRMATKTL 179
A +EE CVA +Y +SR RF GLA AAGA++ L RVA EG G VRR MA KTL
Sbjct: 445 AELEEWCVAAIYALSRGSLRFRGLAHAAGADKALRRVADEGAPGGVRREMARKTL 499
>ref|NP_001147513.1| LOC100281122 [Zea mays] gi|195611900|gb|ACG27780.1|
ubiquitin-protein ligase [Zea mays]
Length = 535
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/55 (56%), Positives = 36/55 (65%)
Frame = +3
Query: 15 AAAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
AA +EE CV+ +Y MSR RF GLARAA A++ L RV G VRR MA KTL
Sbjct: 427 AAGLEEWCVSAMYAMSRGSLRFRGLARAAAADRALRRVVADEGGGVRREMARKTL 481
>dbj|BAJ95293.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = +3
Query: 3 MRSDAAAM----EEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMAT 170
MRS +AA EE+C++ LYGMSR RF GLARAAG E LM VAE +G V R MA
Sbjct: 405 MRSGSAAPGSAEEEYCISALYGMSRGSLRFRGLARAAGVEAALMPVAE-SDGGVGRDMAR 463
Query: 171 KTL 179
+TL
Sbjct: 464 RTL 466
>ref|NP_001057254.1| Os06g0238000 [Oryza sativa Japonica Group]
gi|51535149|dbj|BAD37861.1| arm repeat-containing
protein-like [Oryza sativa Japonica Group]
gi|51535813|dbj|BAD37898.1| arm repeat-containing
protein-like [Oryza sativa Japonica Group]
gi|113595294|dbj|BAF19168.1| Os06g0238000 [Oryza sativa
Japonica Group]
Length = 518
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/54 (59%), Positives = 37/54 (68%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
+A EE+C++ LYGMSR RF GLARAAG E L VAEG G V R MA +TL
Sbjct: 409 SAEEEYCISSLYGMSRGSLRFRGLARAAGVEAALTPVAEGAGG-VGRDMARRTL 461
>gb|EAY89116.1| hypothetical protein OsI_10607 [Oryza sativa Indica Group]
Length = 312
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/54 (59%), Positives = 37/54 (68%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
+A EE+C++ LYGMSR RF GLARAAG E L VAEG G V R MA +TL
Sbjct: 203 SAEEEYCISSLYGMSRGSLRFRGLARAAGVEAALTPVAEGAGG-VGRDMARRTL 255
>ref|NP_001147466.1| ubiquitin-protein ligase [Zea mays] gi|195611598|gb|ACG27629.1|
ubiquitin-protein ligase [Zea mays]
gi|414885287|tpg|DAA61301.1| TPA: putative ARM
repeat-containing protein containing family protein [Zea
mays]
Length = 561
Score = 53.1 bits (126), Expect(2) = 3e-06
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
A +EE C++ +Y MSR RF GLA A+GA++ L RV G VRR +A KTL
Sbjct: 448 ADLEEWCLSAMYAMSRGSLRFRGLALASGADRALRRVVADEGGGVRREIARKTL 501
Score = 23.5 bits (49), Expect(2) = 3e-06
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 167 YEDTXXXXXXTGSTADGNSRANSDGLVSFRLDNTAAGDGSHNKSAPF 307
Y D G D SDGL+SFR G S +A F
Sbjct: 515 YNDLTGSSAECGDGEDCGGSIVSDGLMSFRRRQRELGVSSCGNTAEF 561
>ref|XP_002436775.1| hypothetical protein SORBIDRAFT_10g008610 [Sorghum bicolor]
gi|241914998|gb|EER88142.1| hypothetical protein
SORBIDRAFT_10g008610 [Sorghum bicolor]
Length = 479
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +3
Query: 18 AAMEEHCVAVLYGMSRDRYRFPGLARAAGAEQILMRVAEGGNGDVRRRMATKTL 179
+A +E+C++ LYGMSR RF GLARAAG E L VAE G G V R +A +TL
Sbjct: 372 SAEQEYCISTLYGMSRGSMRFRGLARAAGVEAALQPVAE-GEGGVGRDLARRTL 424