BLASTX nr result

ID: Zingiber25_contig00018878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00018878
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT24637.1| Thioredoxin-like protein 1 [Aegilops tauschii]          58   1e-06
dbj|BAK03063.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06

>gb|EMT24637.1| Thioredoxin-like protein 1 [Aegilops tauschii]
          Length = 276

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
 Frame = +3

Query: 60  VEALGKGMCLSCNTRRDASLELRR----------CSSSAIELGRSWSRFLGRRLVVGSTR 209
           V+A+ KG  +S    R A    RR          C+ +A+++GR  S FLG RL VG  R
Sbjct: 4   VQAVAKGTLVSPCGNRAAGFGARRRGAVAARMSPCAPAAVQIGRK-SLFLGARLTVGPRR 62

Query: 210 GKPLGSGNLGFISAQMSLSVRKSVKWWEKFLHPNM 314
            K L   NL     QM+L+  KS KWWEK L PNM
Sbjct: 63  TK-LVPRNLVASPMQMNLAFAKSTKWWEKGLQPNM 96


>dbj|BAK03063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 276

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
 Frame = +3

Query: 63  EALGKGMCLS-CNTRRDASLELRR---------CSSSAIELGRSWSRFLGRRLVVGSTRG 212
           +A+ KG  +S C TR       RR         C+ +A+ +GR  S FLG RL VG  R 
Sbjct: 5   QAVAKGTVVSPCGTRAAGFGARRRGAVAARMSPCAPAAVRIGRK-SPFLGARLTVGPRRS 63

Query: 213 KPLGSGNLGFISAQMSLSVRKSVKWWEKFLHPNM 314
           K L   NL     QM+L+  KS KWWEK L PNM
Sbjct: 64  K-LVPRNLVSSPVQMNLAFAKSTKWWEKGLKPNM 96


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