BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00018877
         (914 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo...   165   2e-38
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo...   165   2e-38
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-37
ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-37
ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi...   159   1e-36
ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citr...   159   1e-36
ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group] g...   158   3e-36
ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-35
dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japon...   155   3e-35
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab...   154   3e-35
gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indi...   154   3e-35
gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]      154   6e-35
ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Popu...   153   1e-34
ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containi...   152   1e-34
gb|AFW79512.1| DNA-binding protein [Zea mays]                         152   1e-34
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|...   152   1e-34
gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indi...   152   1e-34
gb|EMJ05620.1| hypothetical protein PRUPE_ppa1027225mg [Prunus p...   152   2e-34
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   150   8e-34
tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea m...   148   2e-33

>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
           [Theobroma cacao]
          Length = 621

 Score =  165 bits (418), Expect = 2e-38
 Identities = 97/204 (47%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
 Frame = +3

Query: 327 LSSQAGANSSDRENDLEDGFSSMEVPP--------GSTDSVDGSGNEDDVLXXXXXXXXX 482
           LSSQAGA SS  E++LEDGFS +E P          + D  +     D  L         
Sbjct: 69  LSSQAGAESSGEEDELEDGFSELETPATAEKKENCSAQDKAEDGLISDPELSGDEEDIEE 128

Query: 483 XXXNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEI 662
              N L+L +DE +    K   R    +LFK +   P  S+   LDK++EEGK   R EI
Sbjct: 129 TAKNELELSEDETDLSDKKSSTRRIVSELFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEI 188

Query: 663 SFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIP 842
           S A+  L++RR+Y  ALQL EWLE +KQ++  E  YAS LDLIAKV GL  AE YIEKIP
Sbjct: 189 SVAMLNLRKRRMYGRALQLSEWLEANKQLDFTERDYASRLDLIAKVRGLLKAEMYIEKIP 248

Query: 843 ESFRSELIYSTLLANCVSAVNLKK 914
           +SFR E+IY TLLANCV A N+KK
Sbjct: 249 KSFRGEVIYRTLLANCVVANNVKK 272


>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
           cacao]
          Length = 623

 Score =  165 bits (418), Expect = 2e-38
 Identities = 97/204 (47%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
 Frame = +3

Query: 327 LSSQAGANSSDRENDLEDGFSSMEVPP--------GSTDSVDGSGNEDDVLXXXXXXXXX 482
           LSSQAGA SS  E++LEDGFS +E P          + D  +     D  L         
Sbjct: 71  LSSQAGAESSGEEDELEDGFSELETPATAEKKENCSAQDKAEDGLISDPELSGDEEDIEE 130

Query: 483 XXXNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEI 662
              N L+L +DE +    K   R    +LFK +   P  S+   LDK++EEGK   R EI
Sbjct: 131 TAKNELELSEDETDLSDKKSSTRRIVSELFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEI 190

Query: 663 SFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIP 842
           S A+  L++RR+Y  ALQL EWLE +KQ++  E  YAS LDLIAKV GL  AE YIEKIP
Sbjct: 191 SVAMLNLRKRRMYGRALQLSEWLEANKQLDFTERDYASRLDLIAKVRGLLKAEMYIEKIP 250

Query: 843 ESFRSELIYSTLLANCVSAVNLKK 914
           +SFR E+IY TLLANCV A N+KK
Sbjct: 251 KSFRGEVIYRTLLANCVVANNVKK 274


>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Brachypodium distachyon]
          Length = 612

 Score =  161 bits (407), Expect = 4e-37
 Identities = 100/250 (40%), Positives = 134/250 (53%), Gaps = 2/250 (0%)
 Frame = +3

Query: 171 VLSKSHATELRHGDKKSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGAN 350
           VL  +      H D+   C+   C       V   S+S G      F+W R  SSQAGAN
Sbjct: 29  VLLSADTKNAEHCDR--GCLKSCCCRQPKPSVCQSSFSSGS-----FMWNRTFSSQAGAN 81

Query: 351 SSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXXNPLDL--GDDEAN 524
           S D+E DLEDGFS +EVPP          ++ D              + +DL   DD  +
Sbjct: 82  SGDKEEDLEDGFSDLEVPP--------EADKKDAELTSEESSDEDAADAVDLLEVDDADS 133

Query: 525 KGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYP 704
           K   +   ++S   L K +   P   +   L K+V +G  + R ++ FA+  L+RRR + 
Sbjct: 134 KSEKEPKKKISQCPLLKVMLEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFS 193

Query: 705 MALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLA 884
            ALQL+EWLE SK IEL E  YAS LDL+AKV G+  AEK+I+ IP S R E++Y TLLA
Sbjct: 194 KALQLLEWLEESKLIELVERDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLA 253

Query: 885 NCVSAVNLKK 914
           NCV+ VN+KK
Sbjct: 254 NCVAEVNVKK 263


>ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 625

 Score =  160 bits (404), Expect = 8e-37
 Identities = 100/204 (49%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
 Frame = +3

Query: 327 LSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSG----NEDDVLXXXXXXXXXXXXN 494
           LSSQAG  SS  E+DLEDGFS +E PP + + V  S     NED+++             
Sbjct: 74  LSSQAGTESSGEEDDLEDGFSKLETPP-TAEVVQASNANDENEDELVSGPEISDDEADIE 132

Query: 495 P----LDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEI 662
           P    L+L + E +        R     LFK I   P  S+ +ALDK+V+EG  L R EI
Sbjct: 133 PSQNELELSEIETDLNDKLSPRRRDVSALFKAILEFPGFSVHSALDKWVKEGNDLSRAEI 192

Query: 663 SFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIP 842
           S     L+RRR++  ALQL EWLE  KQIE  E  YAS LDLIAKV GL  AEKY+E IP
Sbjct: 193 SLTKINLRRRRMFGRALQLSEWLEAHKQIEFSERDYASRLDLIAKVYGLWKAEKYVEMIP 252

Query: 843 ESFRSELIYSTLLANCVSAVNLKK 914
           +SFR E IY TLL NCV A NLKK
Sbjct: 253 QSFRGEKIYRTLLVNCVGANNLKK 276


>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Oryza brachyantha]
          Length = 594

 Score =  159 bits (403), Expect = 1e-36
 Identities = 92/238 (38%), Positives = 139/238 (58%), Gaps = 5/238 (2%)
 Frame = +3

Query: 216 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 395
           + +C  L+C +  + LV        P S   F+W+R  SS+AGA+S D++++LE+GFS +
Sbjct: 25  EGDCQKLDCCHQPNPLV-----FHSPFSSGWFMWSRDFSSEAGASSGDKQDELEEGFSDL 79

Query: 396 EVPPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPRLSH 560
           EVPP +       + D S +ED +             + + L + EA+    +   + S 
Sbjct: 80  EVPPQADKKDLGLTSDESSDEDTI-------------DAIGLSEVEADAKPEEPIKKASQ 126

Query: 561 YQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETS 740
             L K +  +PR  +  A  K++  G  L R E+ + +  L++R+LY  ALQL+E++E S
Sbjct: 127 STLLKALLESPRTDVAGAAKKWLNSGNTLERSELFYVILCLRKRKLYRKALQLLEYVEES 186

Query: 741 KQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
           K ++LGE  YASH+DL+AKV G+  AEKYIE IP S R E++Y TLLANCVS  N+KK
Sbjct: 187 KLLDLGERDYASHVDLVAKVHGIYKAEKYIEDIPASHRGEIVYRTLLANCVSIANVKK 244


>ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citrus clementina]
           gi|557532608|gb|ESR43791.1| hypothetical protein
           CICLE_v10011296mg [Citrus clementina]
          Length = 623

 Score =  159 bits (402), Expect = 1e-36
 Identities = 94/203 (46%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
 Frame = +3

Query: 321 RYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDD-----VLXXXXXXXXXX 485
           R LSSQAGA SS  E+DLE+GFS +E P  + D+V  S  ED+     +           
Sbjct: 73  RGLSSQAGAESSGEEDDLEEGFSELETP-ATADAVQKSMAEDEKEYGLISESELSGDHDD 131

Query: 486 XXNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEIS 665
             N L+L + E          +    +LFK I   P  S+ + L KY EEG  L R EI+
Sbjct: 132 IENDLELSETETEASRKTTPSKRKFSKLFKAIMDAPDISIHSTLTKYAEEGNDLSRAEIA 191

Query: 666 FALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPE 845
            A+  L+ RR+Y  ALQL EWLET+K+++  E  YAS LDLIAK+ GL  AE YI+KIPE
Sbjct: 192 LAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPE 251

Query: 846 SFRSELIYSTLLANCVSAVNLKK 914
           SFR E++Y TLLANCV+  N+KK
Sbjct: 252 SFRGEVVYRTLLANCVAGNNVKK 274


>ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
           gi|77553759|gb|ABA96555.1| DNA-binding protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa
           Japonica Group] gi|125578643|gb|EAZ19789.1| hypothetical
           protein OsJ_35368 [Oryza sativa Japonica Group]
           gi|215767656|dbj|BAG99884.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 611

 Score =  158 bits (399), Expect = 3e-36
 Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 5/238 (2%)
 Frame = +3

Query: 216 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 395
           + +C  L+C +    LV   S+S G      F+W+R  SSQAGA+S D++++LE+GFS +
Sbjct: 43  EGDCQKLDCCHQPKPLVCQPSFSSGR-----FMWSRGFSSQAGASSGDKQDELEEGFSDL 97

Query: 396 EVPPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPRLSH 560
           EVPP +       + D S +ED +             + + L + EA+    +   + S 
Sbjct: 98  EVPPEAHKKDLDLTSDESSDEDTI-------------DAIGLSEVEAD-AKPEEPIKKSQ 143

Query: 561 YQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETS 740
             L K +  +PR  +  AL K++ +G  L R E+ + L IL+RR+LY  ALQL+E++E S
Sbjct: 144 STLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQLLEYVEES 203

Query: 741 KQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
           K I+LGE  YAS +DL+AK   +  AEKYIE +P S R E++Y TLLANCV+  N+KK
Sbjct: 204 KLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKK 261


>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Glycine max]
          Length = 609

 Score =  155 bits (393), Expect = 2e-35
 Identities = 96/208 (46%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
 Frame = +3

Query: 288 GPISRKPFLWTRYLSSQAGANSSD-RENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXX 464
           G +S K  + TR LSSQAGA+S+   ++DLE G S +E+  GS D  D   +++D     
Sbjct: 62  GRVSLKFAVGTRELSSQAGASSTKVDDDDLEGGLSELEIQ-GSNDESDADLSDED----- 115

Query: 465 XXXXXXXXXNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKP 644
                    + +DL D +  K   K   R +  +LFK I   P  S+ +AL+K+VE GK 
Sbjct: 116 --EDGGKPVDEMDLSDADPTKK--KSQGRRTQSELFKAIANAPGLSVDSALNKWVEHGKE 171

Query: 645 LGRGEISFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEK 824
           L R EI  A+R L+RR++Y  A QL +WLE++K++E  E  YAS LDLIAK+ GL  AEK
Sbjct: 172 LSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQLDLIAKLRGLPKAEK 231

Query: 825 YIEKIPESFRSELIYSTLLANCVSAVNL 908
           YIE +PESFR EL+Y TLLANC S  NL
Sbjct: 232 YIESVPESFRGELLYRTLLANCASQNNL 259


>dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
           gi|56784204|dbj|BAD81589.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|125569936|gb|EAZ11451.1| hypothetical protein
           OsJ_01319 [Oryza sativa Japonica Group]
          Length = 611

 Score =  155 bits (391), Expect = 3e-35
 Identities = 92/236 (38%), Positives = 137/236 (58%), Gaps = 5/236 (2%)
 Frame = +3

Query: 222 NCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEV 401
           +C  L+C +    LV   S+S G      F+W+R  SSQAGA+S D++++LE+GFS +EV
Sbjct: 45  DCQKLDCCHQPKPLVCQSSFSSGR-----FMWSRVFSSQAGASSGDKQDELEEGFSDLEV 99

Query: 402 PPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPRLSHYQ 566
           PP +       + D S +ED +             + + L   EA+    +   + S   
Sbjct: 100 PPEADKKDLDLTSDESSDEDTI-------------DAIGLSQVEAD-AKPEEPIKKSQST 145

Query: 567 LFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETSKQ 746
           L K +  +PR  +  A  K++ +G  L R E+ + L  L++R+LY  ALQL+E++E SK 
Sbjct: 146 LLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKL 205

Query: 747 IELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
            +LGE  YAS +DL+AKV G+  AEKYIE +P S R E++Y TLLANCV+  N+KK
Sbjct: 206 FDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKK 261


>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
           lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
           ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score =  154 bits (390), Expect = 3e-35
 Identities = 96/202 (47%), Positives = 126/202 (62%)
 Frame = +3

Query: 309 FLWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXXXXXXXXXX 488
           FL  R LSS AG  S   E+DLEDGFS +    GS+ S   + + DD             
Sbjct: 59  FLSKRALSSNAGTKSDQEEDDLEDGFSEL----GSSKSAQDTTSSDD--DEGKLSADEEE 112

Query: 489 XNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISF 668
              LDL DD +NK  V++ P     +LFKTI   P  S+ +ALDK+VEEG  + R E++ 
Sbjct: 113 ELELDLIDD-SNKT-VEKKPS----ELFKTIVSAPGLSIGSALDKWVEEGNEITRVEVAK 166

Query: 669 ALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPES 848
           A+  L+RRR+Y  ALQL EWLE +K+IE+ E  Y+S LDL  K+ GL N E Y++KIP+S
Sbjct: 167 AMLQLRRRRMYGRALQLSEWLEANKKIEMNERDYSSRLDLTVKIRGLENGEAYMQKIPKS 226

Query: 849 FRSELIYSTLLANCVSAVNLKK 914
           F+ E+IY TLLANCV+A N+KK
Sbjct: 227 FKGEVIYRTLLANCVAAGNVKK 248


>gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
          Length = 611

 Score =  154 bits (390), Expect = 3e-35
 Identities = 92/238 (38%), Positives = 139/238 (58%), Gaps = 5/238 (2%)
 Frame = +3

Query: 216 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 395
           + +C  L+C +    LV   S+S G      F+W+R  SSQAGA+S D++++LE+GFS +
Sbjct: 43  EGDCQKLDCCHQPKPLVCQPSFSSGR-----FMWSRGFSSQAGASSGDKQDELEEGFSDL 97

Query: 396 EVPPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPRLSH 560
           +VPP +       + D S +ED +             + + L + EA+    +   + S 
Sbjct: 98  DVPPEAHKKDLDLTSDESSDEDTI-------------DAIGLSEVEAD-AKPEEPIKKSQ 143

Query: 561 YQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETS 740
             L K +  +PR  +  AL K++ +G  L R E+ + L  L+RR+LY  ALQL+E++E S
Sbjct: 144 STLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLEYVEES 203

Query: 741 KQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
           K I+LGE  YAS +DL+AK   +  AEKYIE +P S R E++Y TLLANCV+  N+KK
Sbjct: 204 KLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKK 261


>gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
          Length = 612

 Score =  154 bits (388), Expect = 6e-35
 Identities = 92/219 (42%), Positives = 122/219 (55%), Gaps = 6/219 (2%)
 Frame = +3

Query: 276 SYSRGPISRKPF-----LWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGN 440
           S  + P  R PF      W+R  SSQ GANS D+ +DLEDGFS +EVPP          +
Sbjct: 53  STPKPPACRLPFSSGWSTWSRSFSSQTGANSGDKVDDLEDGFSDLEVPP--------EAD 104

Query: 441 EDDVLXXXXXXXXXXXXNPLDL-GDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINAL 617
           + DV             + + L GDD   K   +   + S   L K +   PR  +   L
Sbjct: 105 KKDVELPSEESSDDDAVDGIGLSGDDADAKPDKEPMKKASQSPLLKVMLEAPRNGVSGTL 164

Query: 618 DKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAK 797
            K+++ G    R +I + +  L++R+ Y  ALQL+EWLE SK I+LGE  YAS LDL+AK
Sbjct: 165 KKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKVIDLGERDYASRLDLVAK 224

Query: 798 VSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
           V G+  AEKYI+ IP S R E++Y TLLANCVS  N+KK
Sbjct: 225 VHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKK 263


>ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Populus trichocarpa]
           gi|550320743|gb|EEF04380.2| hypothetical protein
           POPTR_0016s03540g [Populus trichocarpa]
          Length = 618

 Score =  153 bits (386), Expect = 1e-34
 Identities = 94/215 (43%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
 Frame = +3

Query: 279 YSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSG---NEDD 449
           Y    I  K +L  R  +SQAGA SS+ + DLED FS +E P  + +SV       +E +
Sbjct: 55  YHSTNIGSKFYLEKRGFASQAGAESSESDEDLEDEFSELETPISANESVVNVVQLISEPE 114

Query: 450 VLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYV 629
           +             N L+L D+E +    +   + +  +LFK I   P  S+ + LDK+V
Sbjct: 115 LSDDDTNDIGEPSQNALELSDNETDPAEKRLPRKKAPSELFKAIISAPGVSVHSVLDKWV 174

Query: 630 EEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGL 809
            EG+ L + EIS A+  L++RRL+  ALQL EW+E +K+ +  E  YAS LDLIAKV GL
Sbjct: 175 AEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDFDERDYASRLDLIAKVRGL 234

Query: 810 GNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
             AE YIEKIP+S + E+IY TLLANCVSA N KK
Sbjct: 235 QKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKK 269


>ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Citrus sinensis]
          Length = 623

 Score =  152 bits (385), Expect = 1e-34
 Identities = 92/203 (45%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
 Frame = +3

Query: 321 RYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDD-----VLXXXXXXXXXX 485
           R LSSQAGA SS  E+D E+GFS +E P  +TD+V  S  +D+     +           
Sbjct: 73  RGLSSQAGAESSGEEDDWEEGFSELETP-ATTDAVQKSIADDEKEDGLISESELSGDHDD 131

Query: 486 XXNPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEIS 665
             N L+L + E          +    +LFK I   P  S  + L  YVEEG  L R EIS
Sbjct: 132 IENDLELSETETEPSRKTTPSKRKLSKLFKAIMDAPDISNNSTLTTYVEEGNDLSRAEIS 191

Query: 666 FALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPE 845
            A+  L+ RR+Y  ALQ  EWLET+K+++  E  YAS LDLIAK+ GL  AE YI+KIPE
Sbjct: 192 LAMANLRTRRMYGKALQFSEWLETNKKLDFIERDYASRLDLIAKLRGLQKAESYIQKIPE 251

Query: 846 SFRSELIYSTLLANCVSAVNLKK 914
           SFR E++Y TLLA+CV+  N+KK
Sbjct: 252 SFRGEVVYRTLLASCVAGNNVKK 274


>gb|AFW79512.1| DNA-binding protein [Zea mays]
          Length = 622

 Score =  152 bits (385), Expect = 1e-34
 Identities = 96/243 (39%), Positives = 133/243 (54%), Gaps = 10/243 (4%)
 Frame = +3

Query: 216 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 395
           +++C  + C +   S     S+S G      F  +R  SSQ GANS D+ ++LEDGFS +
Sbjct: 43  EADCQKMCCCHKPRSPAFQLSFSSGQ-----FACSRGFSSQPGANSGDKADELEDGFSDL 97

Query: 396 EVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPR-------- 551
           EVPP +  + DG  +ED               +   L D +A+    K   R        
Sbjct: 98  EVPPAAVQNDDGLASEDS--------SDEDAADEFGLPDVDADAKPEKEHTRRLSDSILL 149

Query: 552 --LSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVE 725
             LS   L KT+   PR  + +AL+K+ ++G    RGE+ + L  L++R  Y  AL+LVE
Sbjct: 150 KTLSDSILLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVE 209

Query: 726 WLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVN 905
           W++ S+  E  E  YA+HLDL AKV GL  AE+ IEKIP S R E++Y TLLANCVSA N
Sbjct: 210 WVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASN 269

Query: 906 LKK 914
           +KK
Sbjct: 270 IKK 272


>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
           DNA-binding protein [Zea mays]
          Length = 622

 Score =  152 bits (385), Expect = 1e-34
 Identities = 96/243 (39%), Positives = 133/243 (54%), Gaps = 10/243 (4%)
 Frame = +3

Query: 216 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 395
           +++C  + C +   S     S+S G      F  +R  SSQ GANS D+ ++LEDGFS +
Sbjct: 43  EADCQKMCCCHKPRSPAFQLSFSSGQ-----FACSRGFSSQPGANSGDKADELEDGFSDL 97

Query: 396 EVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPR-------- 551
           EVPP +  + DG  +ED               +   L D +A+    K   R        
Sbjct: 98  EVPPAAVQNDDGLASEDS--------SDEDAADEFGLPDVDADAKPEKEHTRRLSDSILL 149

Query: 552 --LSHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVE 725
             LS   L KT+   PR  + +AL+K+ ++G    RGE+ + L  L++R  Y  AL+LVE
Sbjct: 150 KTLSDSILLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVE 209

Query: 726 WLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVN 905
           W++ S+  E  E  YA+HLDL AKV GL  AE+ IEKIP S R E++Y TLLANCVSA N
Sbjct: 210 WVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASN 269

Query: 906 LKK 914
           +KK
Sbjct: 270 IKK 272


>gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
          Length = 611

 Score =  152 bits (385), Expect = 1e-34
 Identities = 91/236 (38%), Positives = 137/236 (58%), Gaps = 5/236 (2%)
 Frame = +3

Query: 222 NCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEV 401
           +C  L+C +    LV   S+S G      F+W+R  SSQA A+S D++++LE+GFS +EV
Sbjct: 45  DCQKLDCCHQPKPLVCQSSFSSGR-----FMWSRGFSSQASASSGDKQDELEEGFSDLEV 99

Query: 402 PPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXXNPLDLGDDEANKGGVKRGPRLSHYQ 566
           PP +       + D S +ED +             + + L + EA+    +   + S   
Sbjct: 100 PPEADKKDLDLTSDESSDEDTI-------------DAIGLSEVEAD-AKPEEPIKKSQST 145

Query: 567 LFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETSKQ 746
           L K +  +PR  +  A  K++ +G  L R E+ + L  L++R+LY  ALQL+E++E SK 
Sbjct: 146 LLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKL 205

Query: 747 IELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
            +LGE  YAS +DL+AKV G+  AEKYIE +P S R E++Y TLLANCV+  N+KK
Sbjct: 206 FDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKK 261


>gb|EMJ05620.1| hypothetical protein PRUPE_ppa1027225mg [Prunus persica]
          Length = 611

 Score =  152 bits (384), Expect = 2e-34
 Identities = 102/236 (43%), Positives = 133/236 (56%), Gaps = 6/236 (2%)
 Frame = +3

Query: 225 CIYLECSNITSSLVQLKS-YSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEV 401
           C +  C ++    +  K  Y    +S    +  R  SSQAGA SS  ++DLEDGFS +E 
Sbjct: 32  CFHESCKSMPDGCLSSKRLYYTTQVSWNFSVDRRSFSSQAGAESSGEKDDLEDGFSELET 91

Query: 402 PPGSTDSVDGSGNEDDVLXXXXXXXXXXXXNP----LDLGDDEANKGGVKRGPRLSHY-Q 566
            P    S + S +ED+++             P    L+L ++ A+    KR PR  +  +
Sbjct: 92  LP----SAEASQHEDELISEPELSEDEEEVEPSQHELELSENGADSIE-KRSPRKRNVSE 146

Query: 567 LFKTITGTPRKSLINALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETSKQ 746
           LFK I   P  S+  ALDK+V+ G  L R EIS A+   ++R+++  ALQL EWLE  KQ
Sbjct: 147 LFKAILAFPAFSVHGALDKWVKAGNDLNRAEISLAMFNFRKRQMFGRALQLSEWLEEHKQ 206

Query: 747 IELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
           IE  E  YAS +DLIAKV GL  AEKYIE IP SFR E+IY TLLA  VS  NLKK
Sbjct: 207 IEFVERDYASRVDLIAKVRGLYKAEKYIETIPASFRGEVIYRTLLAYAVSTHNLKK 262


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  150 bits (378), Expect = 8e-34
 Identities = 95/200 (47%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
 Frame = +3

Query: 330 SSQAGANSSDREND-LEDGFSSMEVPPGSTDS---VDGSGNEDDVLXXXXXXXXXXXXNP 497
           SS+AGA ++  E+D LEDGFS +E P G       V  S + D+               P
Sbjct: 78  SSEAGAKTTKEEDDDLEDGFSELETPLGEESEKGVVSDSEDSDESDESEITGPHNELELP 137

Query: 498 LDLGDDEANKGGVKRGPRL-SHYQLFKTITGTPRKSLINALDKYVEEGKPLGRGEISFAL 674
           L    DE + G  KR  R  +  +LFK I      ++  AL+K+VE+GK L R EIS  +
Sbjct: 138 LSHDVDEVSTG--KRSSRKRADSELFKAIMNGTGPTIYTALEKWVEDGKELSREEISLTM 195

Query: 675 RILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSGLGNAEKYIEKIPESFR 854
             L+RR++Y  ALQL EWLE+ K +E  E  YAS LDLIAK+ GL  AE YIEKIPESFR
Sbjct: 196 INLRRRKIYLKALQLSEWLESKKHLEFVERDYASQLDLIAKLHGLHKAEVYIEKIPESFR 255

Query: 855 SELIYSTLLANCVSAVNLKK 914
            E+IY TLLANCV+  NLKK
Sbjct: 256 GEIIYRTLLANCVTQNNLKK 275


>tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
          Length = 613

 Score =  148 bits (374), Expect = 2e-33
 Identities = 90/216 (41%), Positives = 129/216 (59%), Gaps = 1/216 (0%)
 Frame = +3

Query: 270 LKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDD 449
           L S+S G      F W+R  SSQ GANSSD++++LED FS + VPP +     G  +ED 
Sbjct: 61  LLSFSSGQ-----FAWSRGFSSQPGANSSDKDDELEDVFSDLNVPPEAGKKDAGLTSEDT 115

Query: 450 VLXXXXXXXXXXXXNPLDLGDDEAN-KGGVKRGPRLSHYQLFKTITGTPRKSLINALDKY 626
                         + + L   +A+ K   +   R     L KT+   PR  + +AL+K+
Sbjct: 116 --------SDEDATDEIGLPSMDADAKPETEHIKRTFGSTLLKTVLEAPRHQVTSALEKW 167

Query: 627 VEEGKPLGRGEISFALRILKRRRLYPMALQLVEWLETSKQIELGEWYYASHLDLIAKVSG 806
            ++G  L RGE+ + L  L++R+ Y  AL+LVE+++ S+ +ELGE  YA+ +DL AKV G
Sbjct: 168 AKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLELGERDYAARVDLTAKVYG 227

Query: 807 LGNAEKYIEKIPESFRSELIYSTLLANCVSAVNLKK 914
           L  AE+YIEKIP S RSE++Y TLLANCV+  N+KK
Sbjct: 228 LHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKK 263