BLASTX nr result

ID: Zingiber25_contig00018823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00018823
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             62   8e-08
gb|EMT31738.1| hypothetical protein F775_10868 [Aegilops tauschii]     57   3e-06
ref|XP_003614708.1| hypothetical protein MTR_5g058060 [Medicago ...    55   7e-06
ref|XP_003625770.1| Starch branching enzyme II [Medicago truncat...    55   9e-06

>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = -1

Query: 384 PCFFCKRLFPGFEPVTFWSHGNNFTVAPRLPF 289
           P  FCKRLFPG EPVT WS GNNFT APRLPF
Sbjct: 79  PLHFCKRLFPGLEPVTSWSQGNNFTAAPRLPF 110


>gb|EMT31738.1| hypothetical protein F775_10868 [Aegilops tauschii]
          Length = 332

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +2

Query: 287 VKGSLGATVKLLPCDQKVTGSNPGNSLLQKKQGLQPFATLFHW 415
           +KGSLGA VKLLPCD +VTGS+PGN+LLQK  G      LF W
Sbjct: 1   MKGSLGAVVKLLPCDHEVTGSSPGNNLLQKSDG-----ELFVW 38


>ref|XP_003614708.1| hypothetical protein MTR_5g058060 [Medicago truncatula]
           gi|355516043|gb|AES97666.1| hypothetical protein
           MTR_5g058060 [Medicago truncatula]
          Length = 62

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/31 (80%), Positives = 25/31 (80%)
 Frame = -1

Query: 384 PCFFCKRLFPGFEPVTFWSHGNNFTVAPRLP 292
           P F  KRLFPG EPVTF SH NNFTVAPRLP
Sbjct: 25  PSFLHKRLFPGLEPVTFQSHDNNFTVAPRLP 55


>ref|XP_003625770.1| Starch branching enzyme II [Medicago truncatula]
           gi|355500785|gb|AES81988.1| Starch branching enzyme II
           [Medicago truncatula]
          Length = 420

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 281 DAVKGSLGATVKLLPCDQKVTGSNPGNSLLQKKQGLQPFATLFHWD 418
           D +KG LG TVKLL  D KV  S+PGNSL +KKQG   ++TL  WD
Sbjct: 76  DLLKGGLGTTVKLLSRDWKVKSSSPGNSLFRKKQGNTAYSTLKWWD 121


Top