BLASTX nr result

ID: Zingiber25_contig00018813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00018813
         (789 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC81278.1| hypothetical protein OsI_24383 [Oryza sativa Indi...    63   1e-07
dbj|BAJ91841.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   2e-06
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi...    57   7e-06
ref|XP_003581687.1| PREDICTED: leucine-rich repeat extensin-like...    57   9e-06
gb|EXC16249.1| Leucine-rich repeat extensin-like protein 2 [Moru...    55   1e-05

>gb|EEC81278.1| hypothetical protein OsI_24383 [Oryza sativa Indica Group]
          Length = 305

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 34/73 (46%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
 Frame = -2

Query: 734 DGRENCIVGLPKQRPPRQCTSPAVQSFDCSRSNCFV-------GGAITSPPP---PSPRF 585
           DGR NCI G P QRPP QC + A   FDCS++ C          G  T P P   P P  
Sbjct: 99  DGRWNCIPGAPAQRPPAQCAAAAAHPFDCSKAQCQATPPTTRRPGGRTPPAPHRSPLPHH 158

Query: 584 NIRRRTPRPPSAP 546
              RRTP PPS+P
Sbjct: 159 MPPRRTPPPPSSP 171


>dbj|BAJ91841.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 617

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
 Frame = -2

Query: 734 DGRENCIVGLPKQRPPRQCTSPAVQSFDCSRSNCFVGGAITSP--------PPPSPR--- 588
           DGR NCI G P QRPP QC + A + FDCS+S C    A+ SP         PP+PR   
Sbjct: 334 DGRWNCIPGAPAQRPPAQCAAAAARPFDCSKSQC-QASAVPSPGRGSHGGRKPPTPRGGP 392

Query: 587 -FNIRRRTPRPPSA 549
               RR +P PP +
Sbjct: 393 SRGHRRLSPPPPGS 406


>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
           gi|127058167|dbj|BAF48664.1| leucine-rich
           repeat/extensin [Nicotiana plumbaginifolia]
          Length = 725

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = -2

Query: 734 DGRENCIVGLPKQRPPRQCTSPAVQSFDCSRSNCFVGGAITSPPPPSPRFNIRRRTPRPP 555
           DG ENCI G   QR  ++C+S   + +DC +S CF   AI++   P P     + TP+P 
Sbjct: 342 DGEENCIAGKEDQRSAKECSSDDAKPYDCRKSQCFSRSAISAVVKPRP-----KPTPKPK 396

Query: 554 SAPVGNMP 531
             PV N P
Sbjct: 397 RPPVQNKP 404


>ref|XP_003581687.1| PREDICTED: leucine-rich repeat extensin-like protein 1-like
           [Brachypodium distachyon]
          Length = 588

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 34/84 (40%), Positives = 38/84 (45%), Gaps = 18/84 (21%)
 Frame = -2

Query: 734 DGRENCIVGLPKQRPPRQCTSPAVQSFDCSRSNCFV------------GGAITSPPP--- 600
           DGR NCI G P QRPP QC + A   FDCS++ C              GG    P P   
Sbjct: 326 DGRWNCIPGAPAQRPPAQCAAAAAHPFDCSKAQCQAAAPGSGRGRDRRGGGRVPPTPAGA 385

Query: 599 PSPRFNI---RRRTPRPPSAPVGN 537
           P PR  I   R  TP  P  P G+
Sbjct: 386 PRPRTRIAPPRSSTPSQPLPPPGS 409


>gb|EXC16249.1| Leucine-rich repeat extensin-like protein 2 [Morus notabilis]
          Length = 789

 Score = 55.1 bits (131), Expect(2) = 1e-05
 Identities = 32/74 (43%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = -2

Query: 737 FDGRENCIVGLPKQRPPRQCTSPAVQSFDCSRSNCFVGGAI----TSPPPPSPRFNIRRR 570
           F+GR+NCI G   QR  RQC S   +  DCS+  C  GG       SP P SPR    R 
Sbjct: 341 FNGRQNCIAGKSDQRSKRQCASDDARPVDCSKFGCDAGGGSGGGGGSPRPISPR--RPRP 398

Query: 569 TPRPPSAPVGNMPR 528
            P+PPS      PR
Sbjct: 399 IPQPPSPRPAQSPR 412



 Score = 21.2 bits (43), Expect(2) = 1e-05
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -1

Query: 504 TTATIRNSPFF*NAPATDAVEVPPNDSSSSYHFSTTLQHYSTGITIN--AFHIPAA 343
           +T TI+      N+P     +V P+        S T QHY+  I  +  A H P++
Sbjct: 451 STPTIKPPSLTPNSPPPPTKKVSPSTHLPPPPPSPTYQHYTPPIATSPPANHNPSS 506


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