BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00018281
         (880 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   245   1e-62
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              233   5e-59
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...   231   3e-58
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr...   229   8e-58
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   229   1e-57
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...   226   7e-57
ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group] g...   226   9e-57
ref|XP_002329469.1| predicted protein [Populus trichocarpa] gi|5...   226   9e-57
gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japo...   226   9e-57
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr...   225   1e-56
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   223   7e-56
ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832...   221   3e-55
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]     221   4e-55
ref|XP_006664368.1| PREDICTED: probable mediator of RNA polymera...   221   4e-55
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr...   220   5e-55
ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Popu...   219   1e-54
gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus...   216   7e-54
gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group] gi...   215   2e-53
gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indi...   215   2e-53
ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group] g...   215   2e-53

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  245 bits (626), Expect = 1e-62
 Identities = 136/242 (56%), Positives = 164/242 (67%), Gaps = 3/242 (1%)
 Frame = +2

Query: 35  VPRSYGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVN 214
           V R    SI+E + KILAIK+ LED DQ EDSLV LLQ+LADMDITFK LKETDIGR+VN
Sbjct: 91  VERDRDGSIDEEQSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVN 150

Query: 215 NHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQN- 391
             RKHPSNEVR+LVKQLVRKWKDLVDEW K ++   T + AI+ +GDSP Q + +S+ N 
Sbjct: 151 RLRKHPSNEVRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNV 210

Query: 392 GNQMPEFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPARNNGXXXXXXXXXXXXXXXX 571
            +Q+P+F  SPNPH G   +++N+ E +EPK K        N                  
Sbjct: 211 HHQVPDFAYSPNPHNGSSGSDKNNVE-LEPKRKAVPRRETPNKPNQTPPIPTSVALNKQR 269

Query: 572 XXXDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRK--GVSHG 745
              D+  D E+LASAR+RLH+NY EAQNAKKQRTIQVMDIH+IPKPKN+F  K  G    
Sbjct: 270 EQKDSLVDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKNRGGVQA 329

Query: 746 KH 751
           KH
Sbjct: 330 KH 331


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  233 bits (595), Expect = 5e-59
 Identities = 132/243 (54%), Positives = 162/243 (66%), Gaps = 8/243 (3%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG  ++E + +IL IK+ LE  DQP+DS+V LLQ LADMDITFK LKETDIGR+VN  RK
Sbjct: 100 YGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRK 159

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMP 406
           HPSN+VR+LVK LVRKWKDLVDEW KSN A    S A++  GDSP Q   R+    +Q+P
Sbjct: 160 HPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRTGH--HQVP 217

Query: 407 EFGNSPNPHVGYLSTERNSSEPIEPKAKK------PTHNPARNNGXXXXXXXXXXXXXXX 568
           +FG SPNP  G   +++N++EP EPK K       PT  PA++                 
Sbjct: 218 DFGYSPNPQNGSSGSDKNNAEP-EPKVKAIPRKEVPT-RPAQS-------APVSSSFPPP 268

Query: 569 XXXXDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRKGV--SH 742
               D + D ++ ASARKRLH+NY EAQNAKKQRTIQVMDIH+IPKPKN+F  K    S 
Sbjct: 269 NKQRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQ 328

Query: 743 GKH 751
           G+H
Sbjct: 329 GRH 331


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score =  231 bits (589), Expect = 3e-58
 Identities = 127/237 (53%), Positives = 157/237 (66%), Gaps = 2/237 (0%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG  ++E + +IL IK+ LE  DQP+DS+V LLQ LADMDITFK LKETDIGR+VN  RK
Sbjct: 100 YGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRK 159

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMP 406
           HPSN+VR+LVK LVRKWKDLVDEW KSN A    S A++  GDSP Q   R+  +  Q+P
Sbjct: 160 HPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRTGHH--QVP 217

Query: 407 EFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPARNNGXXXXXXXXXXXXXXXXXXXDN 586
           +FG SPNP  G   +++N++EP EPK ++                             D 
Sbjct: 218 DFGYSPNPQNGSSGSDKNNAEP-EPKKQR-----------------------------DT 247

Query: 587 SPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRKGV--SHGKH 751
           + D ++ ASARKRLH+NY EAQNAKKQRTIQVMDIH+IPKPKN+F  K    S G+H
Sbjct: 248 AIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 304


>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
           Transcription elongation factor (TFIIS) family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 336

 Score =  229 bits (585), Expect = 8e-58
 Identities = 124/239 (51%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG   ++ ++KIL IK+ LE+  Q EDSL+ LLQ+LADMDITF+ LKETDIGR+VN  RK
Sbjct: 104 YGGLFDDEQKKILEIKEHLEEPHQSEDSLIDLLQSLADMDITFQALKETDIGRHVNILRK 163

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           H SN+VR+LVKQLVRKWK++VDEW + N      S A++ +GDSP +   +  QNG +Q+
Sbjct: 164 HSSNDVRRLVKQLVRKWKEIVDEWVRLNQPGELESSALMADGDSPQR---KPPQNGYHQV 220

Query: 404 PEFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPARNNGXXXXXXXXXXXXXXXXXXXD 583
           P+F  SPNPH G   +++N+SEP     +KP   P RN                     +
Sbjct: 221 PDFAYSPNPHNGSSGSDKNNSEP----ERKPKPIPPRNEPPPKPTYSAPVLQNRQREQKE 276

Query: 584 NSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRK---GVSHGKH 751
           ++ D+ERLASARKRL +NY EA+NAK+QRTIQVMDIHE+PKPKN+F  K   G S G+H
Sbjct: 277 SNFDSERLASARKRLQENYKEAENAKRQRTIQVMDIHELPKPKNAFFGKNKGGSSQGRH 335


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score =  229 bits (583), Expect = 1e-57
 Identities = 132/243 (54%), Positives = 162/243 (66%), Gaps = 8/243 (3%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG  ++E + +IL IK+ LE  DQP+DS+V LLQ LADMDITFK LKETDIGR+VN  RK
Sbjct: 100 YGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRK 159

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMP 406
           HPSN+VR+LVK LVRKWKDLVDEW KSN A    S A++  GDSP Q   R+    +Q+P
Sbjct: 160 HPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALM-EGDSPPQKIPRTGH--HQVP 216

Query: 407 EFGNSPNPHVGYLSTERNSSEPIEPKAKK------PTHNPARNNGXXXXXXXXXXXXXXX 568
           +FG SPNP  G   +++N++EP EPK K       PT  PA++                 
Sbjct: 217 DFGYSPNPQNGSSGSDKNNAEP-EPKVKAIPRKEVPT-RPAQS-------APVSSSFPPP 267

Query: 569 XXXXDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRKGV--SH 742
               D + D ++ ASARKRLH+NY EAQNAKKQRTIQVMDIH+IPKPKN+F  K    S 
Sbjct: 268 NKQRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQ 327

Query: 743 GKH 751
           G+H
Sbjct: 328 GRH 330


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  226 bits (577), Expect = 7e-57
 Identities = 129/244 (52%), Positives = 159/244 (65%), Gaps = 9/244 (3%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           Y    ++ ++KIL IKQ LED DQ EDSLV LLQ+LADMDITFK LKETDIGR+VN  RK
Sbjct: 121 YAGLFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNQLRK 180

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           H SN+VR+LVKQLVRKWKD+VDEW K N     AS  ++ +GDSP Q   +  QNG +Q+
Sbjct: 181 HTSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQ---KFPQNGHHQV 237

Query: 404 PEFGNSPNPHVGYLSTERNSSEP---IEPKAKKPTHNPARNNGXXXXXXXXXXXXXXXXX 574
           P+F  SPNPH G   +++N+SEP    +P  +K                           
Sbjct: 238 PDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRKEAPPRPAQQSVPVSASASHIVQRQREQ 297

Query: 575 XXDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKP--KNSFVRK---GVS 739
             +N+ D++RLASARKRL  NY EA+NAKKQRTIQVMDIHE+PKP  KN+F  K   G S
Sbjct: 298 QRENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNKNTFFAKNKGGGS 357

Query: 740 HGKH 751
            G+H
Sbjct: 358 QGRH 361


>ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
           gi|108862239|gb|ABA95889.2| transcription elongation
           factor, putative, expressed [Oryza sativa Japonica
           Group] gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza
           sativa Japonica Group] gi|125535897|gb|EAY82385.1|
           hypothetical protein OsI_37597 [Oryza sativa Indica
           Group]
          Length = 340

 Score =  226 bits (576), Expect = 9e-57
 Identities = 131/242 (54%), Positives = 163/242 (67%), Gaps = 14/242 (5%)
 Frame = +2

Query: 68  VKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVR 247
           ++ KILAI+ FLED DQ ED LVSLLQ+LADMDIT+K L+ETDIGR+VN  RKHPS EVR
Sbjct: 100 MESKILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVR 159

Query: 248 QLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPN 427
           QLVK LVRKWK++VD+W + +++ G    +++T+GDSP +I GRS QN  Q+ +F  SP+
Sbjct: 160 QLVKLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPS 218

Query: 428 P--HVGYLSTERNSS-----EPIEPKAKKPT---HNPARNNGXXXXXXXXXXXXXXXXXX 577
           P  H G LS+ER+S+       IE +   P    HN  +NN                   
Sbjct: 219 PQRHNG-LSSERSSNNNGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAPVRTVREQ 277

Query: 578 XDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVS--HG 745
            DN  D E+L SARKRL +NY EAQNAKKQRTIQVMDIH+IPKPK  N+F+RKG     G
Sbjct: 278 KDNLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGGGGLPG 337

Query: 746 KH 751
           KH
Sbjct: 338 KH 339


>ref|XP_002329469.1| predicted protein [Populus trichocarpa]
           gi|566223086|ref|XP_006370923.1| hypothetical protein
           POPTR_0019s01790g [Populus trichocarpa]
           gi|550316504|gb|ERP48720.1| hypothetical protein
           POPTR_0019s01790g [Populus trichocarpa]
          Length = 357

 Score =  226 bits (576), Expect = 9e-57
 Identities = 126/241 (52%), Positives = 153/241 (63%), Gaps = 4/241 (1%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG   ++  +KIL IKQ LED DQPEDSLV LLQ+LADMDITF+ LKETDIGR+VN  RK
Sbjct: 117 YGGLFDDEPKKILVIKQQLEDIDQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRLRK 176

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           HPSN+VR+LVKQLVRKWK++VD+W + N     AS  ++ +GDSP Q   +  QNG +Q+
Sbjct: 177 HPSNDVRRLVKQLVRKWKEIVDDWVRLNPQGEHASSGLMADGDSPQQ---KIPQNGHHQV 233

Query: 404 PEFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPARNNGXXXXXXXXXXXXXXXXXXXD 583
           P+F  SPNPH G   ++RN+SEP       P  N A                        
Sbjct: 234 PDFAYSPNPHNGSSGSDRNNSEPERKPKPAPPRNQAPTKPTQKPVPASSPAPYNVQVSTS 293

Query: 584 NSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNS---FVRKGVSHGKH* 754
           +    +RLASA KRL  NY EA+NAKKQRTIQVMDIHEIPKPKN    F +   + G H 
Sbjct: 294 SFDADQRLASASKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNKNTFFPKNRGAGGSHQ 353

Query: 755 G 757
           G
Sbjct: 354 G 354


>gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japonica Group]
          Length = 241

 Score =  226 bits (576), Expect = 9e-57
 Identities = 131/242 (54%), Positives = 163/242 (67%), Gaps = 14/242 (5%)
 Frame = +2

Query: 68  VKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVR 247
           ++ KILAI+ FLED DQ ED LVSLLQ+LADMDIT+K L+ETDIGR+VN  RKHPS EVR
Sbjct: 1   MESKILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVR 60

Query: 248 QLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPN 427
           QLVK LVRKWK++VD+W + +++ G    +++T+GDSP +I GRS QN  Q+ +F  SP+
Sbjct: 61  QLVKLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPS 119

Query: 428 P--HVGYLSTERNSS-----EPIEPKAKKPT---HNPARNNGXXXXXXXXXXXXXXXXXX 577
           P  H G LS+ER+S+       IE +   P    HN  +NN                   
Sbjct: 120 PQRHNG-LSSERSSNNNGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAPVRTVREQ 178

Query: 578 XDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVS--HG 745
            DN  D E+L SARKRL +NY EAQNAKKQRTIQVMDIH+IPKPK  N+F+RKG     G
Sbjct: 179 KDNLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGGGGLPG 238

Query: 746 KH 751
           KH
Sbjct: 239 KH 240


>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 337

 Score =  225 bits (574), Expect = 1e-56
 Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 4/239 (1%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG   ++ ++++L IK+ LE+ DQ EDSLV LLQ+LADMDITF+ LKETDIGR+VN  RK
Sbjct: 104 YGGLFDDEQKRVLEIKESLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRK 163

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           H SN+VR+LVKQLVRKWK++VDEW + N   G    A + +GDSP Q   +  QNG  Q+
Sbjct: 164 HSSNDVRRLVKQLVRKWKEIVDEWVRVNQP-GELESAALMDGDSPQQ---KLPQNGRQQV 219

Query: 404 PEFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPARNNGXXXXXXXXXXXXXXXXXXXD 583
           P+F  SPNPH G    E+N+SEP   +  KP   P ++                     +
Sbjct: 220 PDFAYSPNPHNGSFGLEKNNSEP--ERKPKPIPPPRKDPPPRPTHSTPPQNVQRQREQKE 277

Query: 584 NSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRK---GVSHGKH 751
           ++ D+ERLASARKRL  NY EA+NAKKQRTIQVMDIHE+PKPKN+F  K   G S G+H
Sbjct: 278 SNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNAFFGKNKGGGSQGRH 336


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score =  223 bits (568), Expect = 7e-56
 Identities = 124/242 (51%), Positives = 161/242 (66%), Gaps = 7/242 (2%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           Y    ++ ++K+L IK+ LE   QPED+LV LLQNLADMDITF+ LKETDIGR+VN  RK
Sbjct: 108 YAGLFDDEQKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRK 167

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           HPSN+VR+LVK LVRKWK++VDEW + N   G  +  ++ +GDSP Q   ++ QNG +Q+
Sbjct: 168 HPSNDVRRLVKHLVRKWKEIVDEWVRLNQP-GEQTATLLADGDSPQQ---KAPQNGYHQV 223

Query: 404 PEFGNSPNPHVGYLSTERNSSEPIEPKAKK-PTHNPARNNGXXXXXXXXXXXXXXXXXXX 580
           P+F  SPNPH G   ++RN+SEP EPK K  P  +                         
Sbjct: 224 PDFAYSPNPHNGGSGSDRNNSEP-EPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQK 282

Query: 581 DNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRK-----GVSHG 745
           + + D+++LASARKRL +NY EA+NAK+QRTIQVMDIHEIPKPKN+F  K     G S G
Sbjct: 283 EANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQG 342

Query: 746 KH 751
           +H
Sbjct: 343 RH 344


>ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
           distachyon]
          Length = 342

 Score =  221 bits (563), Expect = 3e-55
 Identities = 120/233 (51%), Positives = 156/233 (66%), Gaps = 10/233 (4%)
 Frame = +2

Query: 77  KILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVRQLV 256
           KILAI+ FLED DQ ED LVSLLQNLADMDIT+K L++TDIGR+VN+ RKHPS EVRQLV
Sbjct: 105 KILAIRDFLEDPDQSEDELVSLLQNLADMDITYKALQDTDIGRHVNSLRKHPSGEVRQLV 164

Query: 257 KQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPNP-- 430
           K LVRKWK++VD W + +++ G    +I+T+GDSP +  G+S QN  Q+ +F  SP+P  
Sbjct: 165 KLLVRKWKEIVDGWVRLHNSGGDGGSSILTDGDSPEKTQGKSYQNA-QVSDFKYSPSPQR 223

Query: 431 HVGYLSTERNSSEPIEPKAKK------PTHNPARNNGXXXXXXXXXXXXXXXXXXXDNSP 592
           H G  S   +++   E   ++      P++N  + N                    DN+ 
Sbjct: 224 HNGLSSDRSSNNNGFETTMERHRASPAPSYNQTKQNSSNNYSTTSSAPPRTMREQKDNNL 283

Query: 593 DAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVSHG 745
           D E+L SARKRLH+NY EAQNAKKQRT+QV+DIH+IPKPK  N+F+RKG   G
Sbjct: 284 DLEKLDSARKRLHENYQEAQNAKKQRTMQVLDIHDIPKPKNRNTFIRKGGGGG 336


>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
          Length = 418

 Score =  221 bits (562), Expect = 4e-55
 Identities = 128/245 (52%), Positives = 163/245 (66%), Gaps = 10/245 (4%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG   ++ ++KIL IK+ LED+DQ ED+LV LLQ+LADMDITF+ LKETDIGR+VN  RK
Sbjct: 101 YGGLFDDEQKKILEIKEQLEDSDQSEDTLVELLQSLADMDITFQALKETDIGRHVNRLRK 160

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           HPS+EV++LVKQ+VRKWKD VDEW K N     AS +++ +GDSP Q   +  QNG +Q+
Sbjct: 161 HPSSEVKRLVKQVVRKWKDTVDEWVKLNQPGEHASNSLM-DGDSPQQ---KIPQNGHHQV 216

Query: 404 PEFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPA--RNNGXXXXXXXXXXXXXXXXXX 577
           P+F  SPNPH G   +++N+SEP +     P+   A  +                     
Sbjct: 217 PDFAYSPNPHNGSSGSDKNNSEPEQKPKAVPSRREALPKPMNPSVPQSAHSTPQNRQREQ 276

Query: 578 XDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKP--KNSFVRK-----GV 736
            + S DAE+LASARKRL +NY EA+NAKKQRTIQVMDIHEIPKP  KN+F  K     G 
Sbjct: 277 REGSFDAEKLASARKRLQENYKEAENAKKQRTIQVMDIHEIPKPKAKNAFFPKNKGGGGG 336

Query: 737 SHGKH 751
           S G+H
Sbjct: 337 SLGRH 341


>ref|XP_006664368.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Oryza brachyantha]
          Length = 278

 Score =  221 bits (562), Expect = 4e-55
 Identities = 128/242 (52%), Positives = 162/242 (66%), Gaps = 14/242 (5%)
 Frame = +2

Query: 68  VKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVR 247
           ++ KILAI+ FLED DQ ED LVSLLQ+LADMDIT+K L+ETDIGR+VN  RKHPS EVR
Sbjct: 38  MESKILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVR 97

Query: 248 QLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPN 427
           QLVK LVRKWK++VD+W + +++ G    +++T+GDSP +I GR+ QN  Q+ +F  SP+
Sbjct: 98  QLVKLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRNYQNA-QVSDFKYSPS 156

Query: 428 P--HVGYLSTERNSS-----EPIEPKAKKPT---HNPARNNGXXXXXXXXXXXXXXXXXX 577
           P  H G LS+ER+S+       IE +   P    HN  +N+                   
Sbjct: 157 PQRHNG-LSSERSSNNNGIESMIEKRRTSPAPAYHNNKQNSSISYSTSSSSAPVRTMREQ 215

Query: 578 XDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVS--HG 745
            D   D E+L SARKRL +NY EAQNAKKQRTIQVMDIH+IPKPK  N+F+RKG     G
Sbjct: 216 KDTLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGGGGLPG 275

Query: 746 KH 751
           KH
Sbjct: 276 KH 277


>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
           gi|568820070|ref|XP_006464554.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
           hypothetical protein CICLE_v10025964mg [Citrus
           clementina]
          Length = 353

 Score =  220 bits (561), Expect = 5e-55
 Identities = 127/250 (50%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
 Frame = +2

Query: 32  DVPRSYGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYV 211
           D+   YG   ++ +++IL IK+ LED DQ EDSL+ LLQ+LADMDITFK LKETDIGR+V
Sbjct: 107 DIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDSLIDLLQSLADMDITFKALKETDIGRHV 166

Query: 212 NNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQN 391
           N  RKH SN+VR+LVK LVRKWKD+VDEW K N     AS A++ +GDSP Q   +  QN
Sbjct: 167 NQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQ---KIPQN 222

Query: 392 GN-QMPEFGNSPNPHVGYLSTERNSSEPIE-----PKAKKPTHNPARNNGXXXXXXXXXX 553
           GN Q+P+F  SPNPH G   +++N+SEP       P  +K   +                
Sbjct: 223 GNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQ 282

Query: 554 XXXXXXXXXDNSPDAE-RLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPKNSFVRK 730
                    +++ DA+ RLASARKRL +NY   +NAK+QRTIQVMDIHEIPKPKN+F  K
Sbjct: 283 RPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGK 342

Query: 731 ---GVSHGKH 751
              G S G+H
Sbjct: 343 NKGGSSQGRH 352


>ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Populus trichocarpa]
           gi|222847465|gb|EEE85012.1| hypothetical protein
           POPTR_0001s31510g [Populus trichocarpa]
          Length = 361

 Score =  219 bits (558), Expect = 1e-54
 Identities = 128/249 (51%), Positives = 157/249 (63%), Gaps = 12/249 (4%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           +G   ++  +KIL IKQ LED DQPEDSLV LLQ+LADMDITF+ LKETDIGR+VN  RK
Sbjct: 117 FGGLFDDEPKKILDIKQQLEDLDQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRLRK 176

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG-NQM 403
           HPSN+V++LVKQLVRKWK++VD+W + N     AS  ++  GDSP Q   +  QNG +Q+
Sbjct: 177 HPSNDVKRLVKQLVRKWKEIVDDWVRLNPHGERASSGLMAYGDSPQQ---KIPQNGRHQV 233

Query: 404 PEFGNSPNPHVGYLSTERNSSEPIEPKAKKPTHNPARN--------NGXXXXXXXXXXXX 559
           P+F  SPNPH G   ++RN+SEP     +KP   P RN                      
Sbjct: 234 PDFAYSPNPHNGSSGSDRNNSEP----ERKPKLAPPRNEALTKPIKKSVPASSSAPHNVQ 289

Query: 560 XXXXXXXDNSPDA-ERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKP--KNSFVRK 730
                  +N  DA ++ ASA KRL  NY EA+NAKKQRTIQVMDIHEIPKP  KN+F  K
Sbjct: 290 RQREQPKENKFDADQKFASASKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNKNTFFAK 349

Query: 731 GVSHGKH*G 757
               G H G
Sbjct: 350 NRGGGSHQG 358


>gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus vulgaris]
          Length = 353

 Score =  216 bits (551), Expect = 7e-54
 Identities = 127/251 (50%), Positives = 164/251 (65%), Gaps = 16/251 (6%)
 Frame = +2

Query: 47  YGHSIEEVKRKILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRK 226
           YG   ++ ++KIL IK+ LE+ DQ EDSLV LLQ+LADMDITF+ LKETDIGR+VN  RK
Sbjct: 117 YGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRK 176

Query: 227 HPSNEVRQLVKQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNG--NQ 400
           HPSN+VR+LVK LVRKWK++VDEW K     G     ++ +GDSP+Q   +++QNG  +Q
Sbjct: 177 HPSNDVRRLVKLLVRKWKEIVDEWVKLKPQGG--RDTLMADGDSPVQ---KTTQNGHHHQ 231

Query: 401 MPEFGNSPNPHVGYLSTERNSSE--------PIEPKAKKPTHNPARNNGXXXXXXXXXXX 556
           +P+F  SPNPH G   ++RN+SE        P      KPT  P+ +             
Sbjct: 232 IPDFAYSPNPHNGSSGSDRNNSEAEHKPKVIPRSEPRPKPTPAPSIST----------PA 281

Query: 557 XXXXXXXXDNSPDAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIP--KPKNSFVRK 730
                   D+S DAERLASAR+RL +NY EA+NAK+QRTIQVMDI+E+P  KPKN+F  K
Sbjct: 282 SASQNRQRDSSFDAERLASARRRLQENYKEAENAKRQRTIQVMDINELPKSKPKNAFFGK 341

Query: 731 ----GVSHGKH 751
               G S G+H
Sbjct: 342 NKGGGGSQGRH 352


>gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group]
           gi|77548900|gb|ABA91697.1| transcription elongation
           factor, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 339

 Score =  215 bits (548), Expect = 2e-53
 Identities = 126/233 (54%), Positives = 158/233 (67%), Gaps = 10/233 (4%)
 Frame = +2

Query: 77  KILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVRQLV 256
           KILAIK FLED DQ ED L+SLLQ+LADMDIT+K L+ETDIGR+VN  RKHPS EVR LV
Sbjct: 102 KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 161

Query: 257 KQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPNP-H 433
           KQL+RKWK++VD+W + ++++G AS +IIT+G+SP +I G++ Q+ +Q+ EF  SP+P  
Sbjct: 162 KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSR 220

Query: 434 VGYLSTERNSSEPIEPKAKK------PTHNPARN-NGXXXXXXXXXXXXXXXXXXXDNSP 592
               S+ER S+      A K      P H+ AR  N                    D+  
Sbjct: 221 HNNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHL 280

Query: 593 DAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVSHG 745
           D ERL SARKRL +NY EAQNAKKQRTIQVMDI+EIPKPK  N+F+RKG   G
Sbjct: 281 DLERLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGG 333


>gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indica Group]
          Length = 338

 Score =  215 bits (548), Expect = 2e-53
 Identities = 126/233 (54%), Positives = 158/233 (67%), Gaps = 10/233 (4%)
 Frame = +2

Query: 77  KILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVRQLV 256
           KILAIK FLED DQ ED L+SLLQ+LADMDIT+K L+ETDIGR+VN  RKHPS EVR LV
Sbjct: 101 KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 160

Query: 257 KQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPNP-H 433
           KQL+RKWK++VD+W + ++++G AS +IIT+G+SP +I G++ Q+ +Q+ EF  SP+P  
Sbjct: 161 KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSR 219

Query: 434 VGYLSTERNSSEPIEPKAKK------PTHNPARN-NGXXXXXXXXXXXXXXXXXXXDNSP 592
               S+ER S+      A K      P H+ AR  N                    D+  
Sbjct: 220 HNNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHL 279

Query: 593 DAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVSHG 745
           D ERL SARKRL +NY EAQNAKKQRTIQVMDI+EIPKPK  N+F+RKG   G
Sbjct: 280 DLERLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGG 332


>ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group]
           gi|113644540|dbj|BAF27681.1| Os11g0166800, partial
           [Oryza sativa Japonica Group]
          Length = 238

 Score =  215 bits (548), Expect = 2e-53
 Identities = 126/233 (54%), Positives = 158/233 (67%), Gaps = 10/233 (4%)
 Frame = +2

Query: 77  KILAIKQFLEDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRYVNNHRKHPSNEVRQLV 256
           KILAIK FLED DQ ED L+SLLQ+LADMDIT+K L+ETDIGR+VN  RKHPS EVR LV
Sbjct: 1   KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 60

Query: 257 KQLVRKWKDLVDEWAKSNSANGTASPAIITNGDSPLQIYGRSSQNGNQMPEFGNSPNP-H 433
           KQL+RKWK++VD+W + ++++G AS +IIT+G+SP +I G++ Q+ +Q+ EF  SP+P  
Sbjct: 61  KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSR 119

Query: 434 VGYLSTERNSSEPIEPKAKK------PTHNPARN-NGXXXXXXXXXXXXXXXXXXXDNSP 592
               S+ER S+      A K      P H+ AR  N                    D+  
Sbjct: 120 HNNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHL 179

Query: 593 DAERLASARKRLHDNYLEAQNAKKQRTIQVMDIHEIPKPK--NSFVRKGVSHG 745
           D ERL SARKRL +NY EAQNAKKQRTIQVMDI+EIPKPK  N+F+RKG   G
Sbjct: 180 DLERLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGG 232