BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00018001
         (285 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily p...   127   2e-27
gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus pe...   124   1e-26
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus...   122   6e-26
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   122   6e-26
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   119   4e-25
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   115   5e-24
emb|CBI22269.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]     114   2e-23
ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutr...   108   1e-21
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   106   3e-21
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   104   1e-20
ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Caps...   103   2e-20
ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citr...   100   3e-19

>gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 672

 Score =  127 bits (318), Expect = 2e-27
 Identities = 57/93 (61%), Positives = 74/93 (79%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRL EQKL DLH+C++  H++Q+QAQI++ +LH+DL++APKLISA+SLCRQ+  
Sbjct: 76  PSWFSTRRLFEQKLQDLHKCTNLSHIKQLQAQIIRQNLHQDLYIAPKLISAFSLCRQITL 135

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A+ VF Q+  PN HLYN LIRA+  NSQPS AF
Sbjct: 136 ALTVFNQIQDPNVHLYNNLIRAYVQNSQPSQAF 168


>gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/93 (64%), Positives = 71/93 (76%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLLEQKL DLHRC++  H++Q+ AQILKA+LH+DL  APKLI+A+SLCRQ+  
Sbjct: 8   PSWVSRRRLLEQKLSDLHRCTNLSHIKQVHAQILKANLHQDLHTAPKLIAAFSLCRQMAL 67

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF QV  PN HLYN LIRA   NSQ + AF
Sbjct: 68  AVNVFNQVQDPNVHLYNTLIRAHIQNSQTTQAF 100


>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/93 (62%), Positives = 73/93 (78%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S R+LLEQKL DLH+C++ + ++Q+ AQILK++LH DLFV PKLISA+SLCRQ+L 
Sbjct: 37  PSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLL 96

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A   F QV +PN HLYN +IRA + NSQPS AF
Sbjct: 97  ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAF 129


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/93 (62%), Positives = 73/93 (78%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S R+LLEQKL DLH+C++ + ++Q+ AQILK++LH DLFV PKLISA+SLCRQ+L 
Sbjct: 11  PSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLL 70

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A   F QV +PN HLYN +IRA + NSQPS AF
Sbjct: 71  ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAF 103


>gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus vulgaris]
          Length = 604

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLLE+KL  LH+C++ +H+ QI AQILKA+LH DLFVAPKLI+A+SLCR +  
Sbjct: 12  PTWFSRRRLLEEKLSQLHKCTNLNHVNQIHAQILKANLHHDLFVAPKLIAAFSLCRHLAS 71

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADN-SQPSLAF 283
           AV VF Q+P PN HLYN +IRA A N S PSL F
Sbjct: 72  AVNVFNQLPHPNVHLYNSIIRAHAHNHSHPSLPF 105


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S +RLLE+KL DLH+CS+ D + QI AQ+LKA+LH+DLFVAPKLI+A+SLCR +  
Sbjct: 12  PTWFSRQRLLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLAS 71

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADN-SQPSLAF 283
           AV VF  VP PN HLYN +IRA A N S PSL F
Sbjct: 72  AVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPF 105


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/93 (59%), Positives = 70/93 (75%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRL E+KL DLH+C+D++H++++ AQI+K +LH DL+VAPKLISA+SLC Q+  
Sbjct: 14  PTWVSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNL 73

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF Q+  PN HLYN LIRA   NSQ   AF
Sbjct: 74  AVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAF 106


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  119 bits (298), Expect = 4e-25
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLLE+KL DLH+C++ D + QI AQ+LKA+LH+DLFVAPKLI+A+SLCR +  
Sbjct: 12  PTWFSRRRLLEEKLCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLAS 71

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNS 265
           AV VF  VP PN HLYN +IRA A NS
Sbjct: 72  AVNVFNHVPHPNVHLYNSIIRAHAHNS 98


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/93 (61%), Positives = 68/93 (73%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLL+Q L DLHRC++  H++Q+ AQILKA LH+D   APKLI+A+SLCR +  
Sbjct: 10  PGWVSRRRLLDQNLSDLHRCTNLAHIKQVHAQILKAHLHQDPHTAPKLIAAFSLCRHMAL 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF QV  PN HLYN LIRA   N+QPS AF
Sbjct: 70  AVNVFNQVHHPNVHLYNTLIRAHIHNNQPSQAF 102


>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
           gi|550340897|gb|EEE85888.2| hypothetical protein
           POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  115 bits (289), Expect = 5e-24
 Identities = 52/93 (55%), Positives = 71/93 (76%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR+ +QKL DLH+C++ +H++Q+ AQILK +LH+DL+VAPKLISA+SL +++  
Sbjct: 14  PTWVSTRRIFQQKLQDLHKCTNLNHIKQVHAQILKQNLHQDLYVAPKLISAFSLSQEMTL 73

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A+ VF+Q+P PN HLYN  IRA   NS   LAF
Sbjct: 74  AINVFKQIPDPNVHLYNTFIRACVQNSHSLLAF 106


>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/93 (60%), Positives = 69/93 (74%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLLEQK+ DLHRCS  + ++QI AQ+LKA+LHR+ FV  KLI+A+SLCRQ+  
Sbjct: 8   PTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTL 67

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF Q+  P+  LYN LIRA   NS+P LAF
Sbjct: 68  AVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAF 100


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/93 (60%), Positives = 69/93 (74%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLLEQK+ DLHRCS  + ++QI AQ+LKA+LHR+ FV  KLI+A+SLCRQ+  
Sbjct: 8   PTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTL 67

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF Q+  P+  LYN LIRA   NS+P LAF
Sbjct: 68  AVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAF 100


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score =  114 bits (284), Expect = 2e-23
 Identities = 53/93 (56%), Positives = 70/93 (75%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S R+LLEQKL  LH+C++  H++Q+ AQI++A+LH D FVAPKLI+A+SLCRQ+  
Sbjct: 10  PGWVSPRKLLEQKLTHLHKCANILHIKQLHAQIIRANLHLDPFVAPKLIAAFSLCRQIAL 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF Q+P PN H++N +IRA   NSQ   AF
Sbjct: 70  AVNVFDQIPEPNVHVFNAMIRAHTQNSQGPQAF 102


>ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutrema salsugineum]
           gi|557091934|gb|ESQ32581.1| hypothetical protein
           EUTSA_v10003866mg [Eutrema salsugineum]
          Length = 598

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/93 (55%), Positives = 67/93 (72%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR+ E+KL DL +C++   ++Q+ AQI++ +LH+DL +APKLI+A SLCRQ+  
Sbjct: 10  PSWVSSRRIFEEKLQDLPKCANLSQVKQLHAQIIRRNLHQDLHIAPKLITALSLCRQMTL 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF QV  PN HL N LIRA A NSQP  AF
Sbjct: 70  AVGVFNQVQQPNVHLCNSLIRAHAQNSQPYQAF 102


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332644032|gb|AEE77553.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/93 (55%), Positives = 66/93 (70%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR+ E++L DL +C++ + ++Q+ AQI++ +LH DL +APKLISA SLCRQ   
Sbjct: 10  PSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           AV VF QV  PN HL N LIRA A NSQP  AF
Sbjct: 70  AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAF 102


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/93 (54%), Positives = 67/93 (72%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR+ E++L DL +C++ + ++Q+ AQI++ +LH+DL +APKLISA SLCRQ   
Sbjct: 10  PSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNL 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A+ VF QV  PN HL N LIRA A NSQP  AF
Sbjct: 70  ALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAF 102


>ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 602

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/93 (55%), Positives = 65/93 (69%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR  EQKL DL +C D + L+Q+QA + K++L +D F+APKLI+A+S CRQ+  
Sbjct: 10  PTWVSRRRHFEQKLWDLDKCRDINQLKQMQALVYKSNLEQDPFIAPKLIAAFSNCRQMGS 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
            + VF QV  PN HLYN LIRA   NSQPS AF
Sbjct: 70  VLKVFDQVRDPNVHLYNALIRAHIYNSQPSQAF 102


>ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Capsella rubella]
           gi|482559484|gb|EOA23675.1| hypothetical protein
           CARUB_v10016882mg [Capsella rubella]
          Length = 601

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/93 (54%), Positives = 66/93 (70%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR+ E++L DL +C++   ++Q+ AQI++ +LH+DL +APKLISA SLCRQ   
Sbjct: 11  PTWVSSRRIFEERLQDLPKCANLSQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNL 70

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A+ VF QV  PN HL N LIRA A NSQP  AF
Sbjct: 71  ALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAF 103


>ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 602

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/93 (53%), Positives = 64/93 (68%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RR  EQKL DL +C D + L+Q+QA + K++L +D F+APKLI+A+S CRQ+  
Sbjct: 10  PTWVSRRRYFEQKLWDLDKCRDINQLKQMQALVYKSNLEQDPFIAPKLIAAFSNCRQMGS 69

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
            + +F QV  PN HLYN LIRA   N QPS AF
Sbjct: 70  VLKIFDQVRDPNVHLYNALIRAHIYNFQPSQAF 102


>ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citrus clementina]
           gi|557533317|gb|ESR44500.1| hypothetical protein
           CICLE_v10011308mg [Citrus clementina]
          Length = 614

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = +2

Query: 5   PQWTSHRRLLEQKLVDLHRCSDYDHLRQIQAQILKADLHRDLFVAPKLISAYSLCRQVLP 184
           P W S RRLLE+KL +LH+C + +  +Q+ AQI+K DL RD ++APKLIS+ +LCRQ+  
Sbjct: 17  PTWFSKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGL 76

Query: 185 AVAVFRQVPFPNAHLYNVLIRAFADNSQPSLAF 283
           A+ VF  +  P+ HLYN LIRA   NS  + AF
Sbjct: 77  AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAF 109