BLASTX nr result

ID: Zingiber25_contig00017996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00017996
         (321 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360293.1| PREDICTED: ATP synthase delta chain, chlorop...    63   5e-08
gb|EMJ02573.1| hypothetical protein PRUPE_ppa010263mg [Prunus pe...    60   3e-07
ref|XP_004252554.1| PREDICTED: ATP synthase delta chain, chlorop...    58   1e-06
ref|XP_003608818.1| ATP synthase [Medicago truncatula] gi|355509...    56   6e-06
gb|ACJ83278.1| unknown [Medicago truncatula]                           56   6e-06

>ref|XP_006360293.1| PREDICTED: ATP synthase delta chain, chloroplastic-like [Solanum
           tuberosum]
          Length = 250

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +3

Query: 186 RRHRGGGALGAVMMDSAASSYATALAEVAHSSDSLEKTAADVEKL 320
           RR RGGGALGA M DSAA SYA ALA+VA S+++LE+T AD+EK+
Sbjct: 51  RRGRGGGALGAKMADSAAGSYANALADVAKSNETLEQTTADLEKI 95


>gb|EMJ02573.1| hypothetical protein PRUPE_ppa010263mg [Prunus persica]
          Length = 257

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
 Frame = +3

Query: 33  MAALRWSPIALRXXXXXXXXXXXXXXX-RVSCLLRRLPST-APCRLRILSPFPR----RH 194
           MAAL+ +PI+L+                R S L     ST  P  L++ S        R 
Sbjct: 1   MAALQHTPISLQSQNPSSPPQLSSTLTPRTSTLSFSFSSTFTPIPLKLSSSAAAVVTLRR 60

Query: 195 RGGGALGAVMMDSAASSYATALAEVAHSSDSLEKTAADVEKL 320
            GGGALGA M  SAA+SYATALA+VA S+++LE TA DVEK+
Sbjct: 61  NGGGALGARMNSSAAASYATALADVAKSNNTLETTAGDVEKI 102


>ref|XP_004252554.1| PREDICTED: ATP synthase delta chain, chloroplastic-like [Solanum
           lycopersicum]
          Length = 250

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +3

Query: 186 RRHRGGGALGAVMMDSAASSYATALAEVAHSSDSLEKTAADVEKL 320
           RR RG G LGA M DSAA SYA ALA+VA S+++LE+T AD+EK+
Sbjct: 51  RRGRGRGVLGAKMADSAAGSYANALADVAKSNETLEQTTADLEKI 95


>ref|XP_003608818.1| ATP synthase [Medicago truncatula] gi|355509873|gb|AES91015.1| ATP
           synthase [Medicago truncatula]
          Length = 249

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/68 (44%), Positives = 49/68 (72%)
 Frame = +3

Query: 117 VSCLLRRLPSTAPCRLRILSPFPRRHRGGGALGAVMMDSAASSYATALAEVAHSSDSLEK 296
           ++ +L R   T+P +L++    PRR  GGGALG+ M   AA+SYA+ALA++A S+++L+ 
Sbjct: 29  LNLILSRTTFTSP-KLKLSKTKPRR-TGGGALGSTMNSPAAASYASALADLAKSNNTLDA 86

Query: 297 TAADVEKL 320
           T AD++K+
Sbjct: 87  TTADIDKI 94


>gb|ACJ83278.1| unknown [Medicago truncatula]
          Length = 185

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/68 (44%), Positives = 49/68 (72%)
 Frame = +3

Query: 117 VSCLLRRLPSTAPCRLRILSPFPRRHRGGGALGAVMMDSAASSYATALAEVAHSSDSLEK 296
           ++ +L R   T+P +L++    PRR  GGGALG+ M   AA+SYA+ALA++A S+++L+ 
Sbjct: 29  LNLILSRTTFTSP-KLKLSKTKPRR-TGGGALGSTMNSPAAASYASALADLAKSNNTLDA 86

Query: 297 TAADVEKL 320
           T AD++K+
Sbjct: 87  TTADIDKI 94


Top