BLASTX nr result
ID: Zingiber25_contig00017763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00017763
(432 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 92 9e-17
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protei... 81 1e-13
ref|XP_002314968.2| pentatricopeptide repeat-containing family p... 79 5e-13
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [A... 76 4e-12
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citr... 74 2e-11
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,... 74 3e-11
ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutr... 72 6e-11
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|NP_190450.1| pentatricopeptide repeat-containing protein [Ar... 72 6e-11
ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Caps... 70 2e-10
ref|XP_002875927.1| pentatricopeptide repeat-containing protein ... 70 4e-10
gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis] 69 9e-10
ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_004498194.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
gb|EPS58000.1| hypothetical protein M569_16815, partial [Genlise... 67 2e-09
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
M+L EG SLLLKV K ++ VL+ N +P+ + E S LKEADVL+ LK E +I +AL
Sbjct: 1 MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
++F+ +A F+HTPLTYQMMIEKL
Sbjct: 61 EYFKSIANSKSFKHTPLTYQMMIEKL 86
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
M+L EG SLLLKV K ++ VL+ N +P+ + E S LKEADVL+ LK E +I +AL
Sbjct: 1 MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
++F+ +A F+HTPLTYQMMIEKL
Sbjct: 61 EYFKSIANSKSFKHTPLTYQMMIEKL 86
>gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 664
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMI--PDTEKEKGSDVSKLKEADVLRHLKSERNIAV 343
MYL EGRSLLLKV K ++ +L N + P E + + ++L+E+ VL LK E N+++
Sbjct: 1 MYLKEGRSLLLKVQKPSIPFILNTNPLLKPHKESQTEPNQTQLEESQVLSRLKQEPNMSL 60
Query: 344 ALDFFRHVAGLNGFRHTPLTYQMMIEKL 427
AL++F+ +A N F+HTP TYQ MI+KL
Sbjct: 61 ALNYFKSIANSNSFKHTPETYQCMIQKL 88
>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329900|gb|EEF01139.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 662
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVL-TLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVA 346
MYL EG SLLLK K V VL T+N + + +K D++ LKE++VL LK+E NI +A
Sbjct: 1 MYLKEGCSLLLKKQKPLVPFVLNTINPLQNEQK----DLNLLKESEVLNKLKNEPNILLA 56
Query: 347 LDFFRHVAGLNGFRHTPLTYQMMIEKLG 430
L FF+ +A N F+HTPLTY MI++LG
Sbjct: 57 LHFFKSIANSNSFKHTPLTYTTMIKRLG 84
>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum tuberosum]
Length = 663
Score = 77.4 bits (189), Expect = 2e-12
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEK---GSDVSKLKEADVLRHLKSERNIA 340
MYL EG SLLLKV K ++ +L N+ P ++ G + +LKE+DVL+ LK E NI+
Sbjct: 1 MYLKEGCSLLLKVHKKSLPLILN-NVNPSFNVDQLNGGKNPVELKESDVLKRLKYEENIS 59
Query: 341 VALDFFRHVAGLNGFRHTPLTYQMMIEKLG 430
A+++F+ VA F+HTPLTY++M+EKLG
Sbjct: 60 NAIEYFKWVANSTFFKHTPLTYKIMMEKLG 89
>ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [Amborella trichopoda]
gi|548844110|gb|ERN03736.1| hypothetical protein
AMTR_s00078p00041370 [Amborella trichopoda]
Length = 661
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
M L EG +LLLKV + +V+ +L +N KE V+ KE +V R LK E ++ VAL
Sbjct: 1 MVLKEGSTLLLKVRRPSVSVLLNMNGRSGDNKESKGSVAVPKEFEVFRRLKHEEDVNVAL 60
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
++F+ + GF+HT LTYQ+MIEKL
Sbjct: 61 EYFKFITNSKGFKHTSLTYQLMIEKL 86
>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL EGRSLL+K+ K + VL N I + + L+E+DVL+ LK++RN++ L
Sbjct: 1 MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQL--LQESDVLKRLKTDRNLSSVL 58
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKLG 430
FF +A N F+HT TY++MIE+LG
Sbjct: 59 GFFSAIANSNAFQHTASTYRVMIERLG 85
>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL EGRSLL+K+ K + VL N I + + L+E+DVL+ LK++RN++ L
Sbjct: 1 MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQL--LQESDVLKRLKTDRNLSSVL 58
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKLG 430
FF +A N F+HT TY++MIE+LG
Sbjct: 59 GFFSAIANSNAFQHTASTYRVMIERLG 85
>ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Citrus sinensis]
Length = 661
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL +G SL+LK K ++ VL N IP++ ++ + + E V + L+ E NIA AL
Sbjct: 1 MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENK-YTHVDEFRVSKRLRQEPNIASAL 59
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKLG 430
++F+ +A N F+HT LTYQ+MIEKLG
Sbjct: 60 NYFKSIANSNTFKHTALTYQVMIEKLG 86
>ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citrus clementina]
gi|557521203|gb|ESR32570.1| hypothetical protein
CICLE_v10004501mg [Citrus clementina]
Length = 661
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL +G SL+LK K ++ VL N IP++ ++ + + E V + L+ E NIA AL
Sbjct: 1 MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENK-YTHVDEFRVSKRLRQEPNIASAL 59
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKLG 430
++F+ +A N F+HT LTYQ+MIEKLG
Sbjct: 60 NYFKSIANSNTFKHTALTYQVMIEKLG 86
>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 665
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMI--PDTEKEKGSDV-SKLKEADVLRHLKSERNIA 340
MYL EG SLLLKV K + VL N I P + + ++ + +KE+DV+ L++E +I
Sbjct: 1 MYLKEGCSLLLKVHKPLIPFVLNTNPILNPGNKPPEYQEIKTPIKESDVVMRLRTETDIV 60
Query: 341 VALDFFRHVAGLNGFRHTPLTYQMMIEKLG 430
+A ++FR +A F+HT LTYQ+MIEKLG
Sbjct: 61 LASNYFRSIANSKAFQHTQLTYQIMIEKLG 90
>ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutrema salsugineum]
gi|557105334|gb|ESQ45668.1| hypothetical protein
EUTSA_v10010184mg [Eutrema salsugineum]
Length = 650
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL EG SLLLKV K + VL N+ E + +++KE +V++ L+ E + +AL
Sbjct: 1 MYLKEGCSLLLKVQKPIIPFVLNTNLTGKLLLESPNPATEIKEFEVVKRLRQESCVPLAL 60
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
+F+ +A N F+HTPLT+++MI KL
Sbjct: 61 QYFKSIANSNLFKHTPLTFEVMIRKL 86
>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum lycopersicum]
Length = 663
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLT-LNMIPDTEKEKGSDVS-KLKEADVLRHLKSERNIAV 343
MYL +G SLLLKV K ++ +L +N + ++ G +LKE DVL+ LK + NI+
Sbjct: 1 MYLKDGCSLLLKVQKRSLPLILNNVNASFNVDQFNGGKTPVELKEFDVLKRLKYDENISN 60
Query: 344 ALDFFRHVAGLNGFRHTPLTYQMMIEKLG 430
AL++F+ VA F+HTPLTY++M+EKLG
Sbjct: 61 ALEYFKWVANSTFFKHTPLTYKIMMEKLG 89
>ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48810 gi|7576219|emb|CAB87909.1| putative protein
[Arabidopsis thaliana] gi|332644937|gb|AEE78458.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 659
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL EG SLLLKV K + VL N+ + + + +++KE DV++ L+ E + +AL
Sbjct: 1 MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLAL 60
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
FF+ +A N F+HTPLT+++MI KL
Sbjct: 61 HFFKSIANSNLFKHTPLTFEVMIRKL 86
>ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Capsella rubella]
gi|482559448|gb|EOA23639.1| hypothetical protein
CARUB_v10016837mg [Capsella rubella]
Length = 634
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPD--TEKEKGSDVSKLKEADVLRHLKSERNIAV 343
MYL EG SLLLKV K + VL N+ + TE K ++ KE+DV++ L+ E + +
Sbjct: 1 MYLKEGCSLLLKVQKPLIPFVLNTNLSVNLLTEAPKHDEI---KESDVVKRLRQESCVPL 57
Query: 344 ALDFFRHVAGLNGFRHTPLTYQMMIEKL 427
AL FF+ VA N F+HTP T+++MI KL
Sbjct: 58 ALHFFKSVANSNLFKHTPFTFEVMIRKL 85
>ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321765|gb|EFH52186.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL EG SLLLKV K + VL N+ + E + +++KE+ VL+ L+ E + +AL
Sbjct: 1 MYLKEGCSLLLKVQKPLIPFVLNTNLNVNLLTESPNH-AEIKESAVLKRLRQESCVPLAL 59
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
FF+ +A N F+HTPLT+++MI KL
Sbjct: 60 HFFKSIANSNLFKHTPLTFEVMIRKL 85
>gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis]
Length = 653
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/86 (41%), Positives = 48/86 (55%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 349
MYL EGRSL LK+ KS + L KE+DVL+ L E ++A+A+
Sbjct: 1 MYLKEGRSLALKLRKSPMAKPFFLLNTTKPIPNPNDSEPVFKESDVLKRLNQEPDLALAM 60
Query: 350 DFFRHVAGLNGFRHTPLTYQMMIEKL 427
DFF+ ++ F HTPLTY MI+KL
Sbjct: 61 DFFKSISNSGAFSHTPLTYHAMIDKL 86
>ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Fragaria vesca subsp. vesca]
Length = 666
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLN--MIPDTEKEKGSDVSK--LKEADVLRHLKSERNI 337
MYL EG SLLLK+ K VL+ N ++P + ++ ++ LKE++V + LK E +
Sbjct: 1 MYLKEGCSLLLKIHKPTRPLVLSSNPNLVPSLNPKPQTEPTQPILKESEVFQRLKHEPQL 60
Query: 338 AVALDFFRHVAGLNGFRHTPLTYQMMIEKLG 430
+AL++FR ++ F+HT LTY MIEKLG
Sbjct: 61 GLALEYFRSISNSRAFKHTQLTYTAMIEKLG 91
>ref|XP_004498194.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cicer arietinum]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSK-LKEADVLRHLKSERNIAVA 346
MYL +G SL+LK+ KS++ VL N I + +K + S + E+ V+ LK E +IA +
Sbjct: 1 MYLKDGCSLILKLRKSSIPFVLNTNPISNLDKPNNLNPSPTIPESHVINVLKHESDIASS 60
Query: 347 LDFFRHVAGLNGFRHTPLTYQMMIEKLG 430
L++F ++ F+HT LTYQ MIEKLG
Sbjct: 61 LEYFTSLSNSGTFKHTHLTYQTMIEKLG 88
>gb|EPS58000.1| hypothetical protein M569_16815, partial [Genlisea aurea]
Length = 588
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = +2
Query: 170 MYLSEGRSLLLKVPKSAVTSVLTLN---MIPDTEKEKGSD--VSKLKEADVLRHLKSERN 334
MYL EGRSL+LK K + S+L + +I D K+ + + L+E+ VL L++E +
Sbjct: 1 MYLREGRSLILKSLKPSTPSLLRTDHPSLIFDQHKDDDPEKIATSLEESQVLNRLRAETD 60
Query: 335 IAVALDFFRHVAGLNGFRHTPLTYQMMIEKL 427
++ AL +F+ VA F+HTPLTY MIEKL
Sbjct: 61 VSTALHYFKSVAHSASFKHTPLTYGAMIEKL 91