BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00017298
         (607 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002456227.1| hypothetical protein SORBIDRAFT_03g032450 [S...    40   6e-07
gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]     42   1e-06
gb|EAY75541.1| hypothetical protein OsI_03446 [Oryza sativa Indi...    40   3e-06
ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus...    43   5e-06

>ref|XP_002456227.1| hypothetical protein SORBIDRAFT_03g032450 [Sorghum bicolor]
           gi|241928202|gb|EES01347.1| hypothetical protein
           SORBIDRAFT_03g032450 [Sorghum bicolor]
          Length = 145

 Score = 40.4 bits (93), Expect(2) = 6e-07
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +2

Query: 209 LKQFDKGTAKVQFSKEPNNL*NVFS 283
           +KQF  G AKVQFSKEPNNL NV S
Sbjct: 21  IKQFGNGNAKVQFSKEPNNLYNVHS 45



 Score = 39.3 bits (90), Expect(2) = 6e-07
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +3

Query: 285 TGSANKMLVIIQP--GDQDLAVFHTTKM*KRNKPSSLHYQTLAEK 413
           +G ANK  V +QP  G +   V  TTK  K+NKP+SLH++++  K
Sbjct: 49  SGLANKKTVTVQPASGKEAAVVLSTTKTKKQNKPASLHHKSVMRK 93


>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +2

Query: 152 MASIPGPAALLGACEEQCSL-KQFDKGTAKVQFSKEPNNL*NVFS 283
           MA++PG           C L KQF +GTA V+FSKEPNNL NV S
Sbjct: 1   MATVPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNS 45



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +3

Query: 285 TGSANKMLVIIQPGDQDLAVF-HTTKM*KRNKPSSLHYQTLAEK 413
           +G ANK  V IQP  +D +V   TTK  K+NKPSSL ++++ +K
Sbjct: 49  SGLANKKTVTIQPAGKDQSVLLATTKSKKQNKPSSLLHKSVMKK 92


>gb|EAY75541.1| hypothetical protein OsI_03446 [Oryza sativa Indica Group]
          Length = 145

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +2

Query: 209 LKQFDKGTAKVQFSKEPNNL*NVFS 283
           +KQF  G AKVQFSKEPNNL NV S
Sbjct: 21  VKQFGNGNAKVQFSKEPNNLYNVHS 45



 Score = 37.4 bits (85), Expect(2) = 3e-06
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +3

Query: 285 TGSANKMLVIIQP--GDQDLAVFHTTKM*KRNKPSSLHYQTLAEK 413
           +G ANK  V +QP  G +   V  TTK  K+NKP+SL+++++  K
Sbjct: 49  SGLANKKTVTVQPANGKETAVVLSTTKTEKQNKPASLYHKSVMRK 93


>ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus communis]
           gi|223544790|gb|EEF46305.1| 60S ribosomal protein L28,
           putative [Ricinus communis]
          Length = 144

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +2

Query: 152 MASIPGPAALLGACEEQCSL-KQFDKGTAKVQFSKEPNNL*NVFS 283
           MA++PG        +  C L KQF +G+A VQFSKEPNNL N+ S
Sbjct: 1   MATVPGQLIWEAVKKNNCFLVKQFGRGSASVQFSKEPNNLYNLNS 45



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +3

Query: 285 TGSANKMLVIIQPGDQDLAVFHTTKM*KRNKPSSLHYQTLAEK 413
           +G +NK  V IQ G     +  TTK  K+N+PS+L ++++ +K
Sbjct: 49  SGLSNKKTVSIQAGKDQSVILATTKTKKQNRPSALLHKSVMKK 91