BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00016909
         (960 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   360   4e-97
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu...   355   1e-95
ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   355   1e-95
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              353   7e-95
sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   352   9e-95
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   350   6e-94
ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   349   8e-94
ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   348   1e-93
ref|NP_001147746.1| ATP binding protein [Zea mays] gi|195613438|...   348   1e-93
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr...   348   2e-93
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   347   5e-93
dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare]    347   5e-93
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   346   7e-93
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   346   9e-93
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   345   1e-92
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ...   345   1e-92
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not...   344   3e-92
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe...   343   6e-92
ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [A...   341   2e-91
gb|ESW25915.1| hypothetical protein PHAVU_003G0764001g, partial ...   341   3e-91

>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  360 bits (924), Expect = 4e-97
 Identities = 183/277 (66%), Positives = 221/277 (79%), Gaps = 1/277 (0%)
 Frame = +2

Query: 131 FPCRLFSLSSGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPGHILQRAEEIGY 310
           F  R+ + +  A P+ A   ++      + D    T TLR++C+G VP H+L+R EE+G+
Sbjct: 42  FTRRVSNSNCNAKPAQA--TLNSSSITEASDIGERTLTLREICQGCVPEHVLRRIEEVGF 99

Query: 311 TQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSREL 490
             PT+VQ  +LP+LLSGRDC+LHAQTGSGKTL YLL +FS ++   S+VQALIVVP+REL
Sbjct: 100 IVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTREL 159

Query: 491 GIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQ 667
           GIQVTKV R+L AKP+  E+   +CTVMALLDGGMLKRHKSWLKAEPP IVVATV SLCQ
Sbjct: 160 GIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQ 219

Query: 668 MIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNR 847
           M+EK I KLE+MR+LVIDEVDFMF++SKQV  LRKLL  YS+ + RQTV ASASIPQH R
Sbjct: 220 MLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRR 279

Query: 848 FLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
           FLHDC+QQKWTK+DVVHVHVNP+EPMPS LHH+FVIC
Sbjct: 280 FLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVIC 316


>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
           gi|550329495|gb|EEF01963.2| hypothetical protein
           POPTR_0010s10230g [Populus trichocarpa]
          Length = 477

 Score =  355 bits (912), Expect = 1e-95
 Identities = 174/243 (71%), Positives = 208/243 (85%), Gaps = 1/243 (0%)
 Frame = +2

Query: 233 ETPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAY 412
           E  TLR++C G+VP H+L+R EE+GY  PT+VQ  +LP+L SGRDC+LHAQTGSGKTLAY
Sbjct: 73  EALTLREICLGRVPEHLLRRVEEVGYAVPTDVQKQALPVLFSGRDCILHAQTGSGKTLAY 132

Query: 413 LLAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGG 589
           LL +FS I+  RS+VQALIVVP+RELGIQVTKV R+L A P   +    +CTVMALLDGG
Sbjct: 133 LLLIFSVINTQRSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQKSCTVMALLDGG 192

Query: 590 MLKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLR 769
           ML+RHKSWLKAEPP IVVAT+ SLCQM+EK++LKLE+M++LVIDEVDFMF+SSKQV  LR
Sbjct: 193 MLRRHKSWLKAEPPTIVVATIASLCQMLEKHLLKLESMQVLVIDEVDFMFNSSKQVSSLR 252

Query: 770 KLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKF 949
           KLL  YS+ ++RQTV ASASIPQHNRFL+DC+QQKWTK DVVHVHVNP+EPMP+ L H+F
Sbjct: 253 KLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRF 312

Query: 950 VIC 958
           VIC
Sbjct: 313 VIC 315


>ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Setaria italica]
          Length = 456

 Score =  355 bits (912), Expect = 1e-95
 Identities = 176/239 (73%), Positives = 201/239 (84%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR++C G+VP H+LQRAEE+GY  PT VQ  SLPLLLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 56  TLREVCAGRVPDHVLQRAEEVGYVVPTEVQEQSLPLLLSGQDCILHAQTGSGKTLAYLLS 115

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 601
           VFSAIDF RSSVQAL+VVP+RELGIQVTKV R+L AK         CTVMALLDGGMLKR
Sbjct: 116 VFSAIDFRRSSVQALVVVPTRELGIQVTKVARLLAAK--------ACTVMALLDGGMLKR 167

Query: 602 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 781
            KSW+KAEPP I+VATV SLCQM+E+    L++MR+LVIDEVDF+F SSKQV  LRK+L 
Sbjct: 168 QKSWVKAEPPAIIVATVPSLCQMVERRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILT 227

Query: 782 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
            YS   +RQT+ ASASIPQHNRFLHDCVQ KWTK+DVVHVHVNPV+PMPS L HK+VIC
Sbjct: 228 SYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKSDVVHVHVNPVQPMPSHLCHKYVIC 286


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  353 bits (905), Expect = 7e-95
 Identities = 182/281 (64%), Positives = 220/281 (78%), Gaps = 5/281 (1%)
 Frame = +2

Query: 131 FPCRLFSLSSGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPGHILQ----RAE 298
           F  R+ + +  A P+ A   ++      + D    T TLR++C+G VP H++     R E
Sbjct: 42  FTRRVSNSNCNAKPAQA--TLNSSSITEASDIGERTLTLREICQGCVPEHVIALICFRIE 99

Query: 299 EIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVP 478
           E+G+  PT+VQ  +LP+LLSGRDC+LHAQTGSGKTL YLL +FS ++   S+VQALIVVP
Sbjct: 100 EVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVP 159

Query: 479 SRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLKRHKSWLKAEPPQIVVATVG 655
           +RELGIQVTKV R+L AKP+  E+   +CTVMALLDGGMLKRHKSWLKAEPP IVVATV 
Sbjct: 160 TRELGIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVR 219

Query: 656 SLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIP 835
           SLCQM+EK I KLE+MR+LVIDEVDFMF++SKQV  LRKLL  YS+ + RQTV ASASIP
Sbjct: 220 SLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIP 279

Query: 836 QHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
           QH RFLHDC+QQKWTK+DVVHVHVNP+EPMPS LHH+FVIC
Sbjct: 280 QHRRFLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVIC 320


>sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic; Flags: Precursor
          Length = 438

 Score =  352 bits (904), Expect = 9e-95
 Identities = 173/239 (72%), Positives = 199/239 (83%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR++C G+VP H+LQRAEE+GY  PT VQ  SLP+LLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 39  TLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 98

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 601
           VFSAIDF RSSVQAL+VVP+RELG+QVTKV R+L AK         CTVMALLDGGML+R
Sbjct: 99  VFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAAK--------ACTVMALLDGGMLRR 150

Query: 602 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 781
            KSW+KAEPP I+VATV SLCQMIEK    L++MR+LVIDEVDF+F SSKQV  LRK+L 
Sbjct: 151 QKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILT 210

Query: 782 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
            YS   +RQT+ ASASIPQHNRF+HDCVQ KWTK DVVHVHVNPV+PMPS L HK+ IC
Sbjct: 211 SYSAASSRQTIFASASIPQHNRFVHDCVQHKWTKTDVVHVHVNPVQPMPSHLQHKYAIC 269


>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  350 bits (897), Expect = 6e-94
 Identities = 172/242 (71%), Positives = 201/242 (83%), Gaps = 1/242 (0%)
 Frame = +2

Query: 236 TPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 415
           T TLR+LC G VP H+++R EE+GY  PT VQ  +LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 63  TATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYL 122

Query: 416 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 592
           L + S ID  RS+VQALIVVP+RELG+QVTKV R+L AKP   E    +CTVMALLDGGM
Sbjct: 123 LQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCTVMALLDGGM 182

Query: 593 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 772
           L RHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL++ ++LV+DEVDFMF+SSK++  L++
Sbjct: 183 LNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKR 242

Query: 773 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 952
           LL  YST   RQT+ ASASIPQH RFL+DCVQQKWTK DVVHVHVN VEPMPS LHH+FV
Sbjct: 243 LLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFV 302

Query: 953 IC 958
           +C
Sbjct: 303 VC 304


>ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Brachypodium distachyon]
          Length = 446

 Score =  349 bits (896), Expect = 8e-94
 Identities = 173/267 (64%), Positives = 208/267 (77%)
 Frame = +2

Query: 158 SGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCL 337
           S  + S +   ++   +RS   P     TLR++C G+VP H+LQRAE++GY  PT VQ  
Sbjct: 19  STRISSPSYTPLAASTSRSGLRPLRAAATLREVCAGRVPDHVLQRAEDVGYVVPTEVQEQ 78

Query: 338 SLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVR 517
           SLP+LLSG+DC+LHAQTGSGKTLAYLL+VFSAID  RSSVQAL++VP+RELGIQVTKV R
Sbjct: 79  SLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDVRRSSVQALVIVPTRELGIQVTKVAR 138

Query: 518 VLTAKPVGFEMIHTCTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLE 697
           VL AK         CTVMALLDGGML R KSW+KAEPP I+VATV SLCQM+EK    L 
Sbjct: 139 VLAAK--------ACTVMALLDGGMLTRQKSWVKAEPPAIIVATVASLCQMVEKRAFSLG 190

Query: 698 AMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKW 877
           +++ILVIDEVDF+F SSKQV  +RK+L  Y+    RQT+ ASASIPQHNRF+HDC+Q KW
Sbjct: 191 SIKILVIDEVDFIFGSSKQVNSVRKILTSYTAASGRQTIFASASIPQHNRFVHDCIQHKW 250

Query: 878 TKNDVVHVHVNPVEPMPSQLHHKFVIC 958
           TK++VVHVHVNPV+PMPSQLHHK+ IC
Sbjct: 251 TKSNVVHVHVNPVQPMPSQLHHKYAIC 277


>ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Oryza brachyantha]
          Length = 448

 Score =  348 bits (894), Expect = 1e-93
 Identities = 171/239 (71%), Positives = 200/239 (83%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR++C G+VP H++QRAEE+GY  PT VQ  SLP+LLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 49  TLREVCAGRVPEHVIQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 108

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 601
           VFSAIDF RSSVQAL+VVP+RELG+QVTKV RVL AK         CTVMALLDGGML+R
Sbjct: 109 VFSAIDFGRSSVQALVVVPTRELGMQVTKVARVLAAK--------ACTVMALLDGGMLRR 160

Query: 602 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 781
            KSW+KA+PP IVVATV SLCQM+EK    L++M++LVIDEVDF+F SSKQV  LRK+L 
Sbjct: 161 QKSWVKADPPAIVVATVASLCQMLEKRAFSLQSMKVLVIDEVDFIFGSSKQVSSLRKILT 220

Query: 782 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
            YS   +RQT+ ASASIPQHNRFLHDCVQ KWTK+DVVHVHVNPV+PMPS L H++ IC
Sbjct: 221 SYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKSDVVHVHVNPVQPMPSHLCHRYAIC 279


>ref|NP_001147746.1| ATP binding protein [Zea mays] gi|195613438|gb|ACG28549.1| ATP
           binding protein [Zea mays]
          Length = 447

 Score =  348 bits (894), Expect = 1e-93
 Identities = 171/239 (71%), Positives = 199/239 (83%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR++C G+VP H+LQRAEEIGY  PT +Q  SLPLLLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 46  TLREVCSGRVPDHVLQRAEEIGYVVPTEMQEQSLPLLLSGQDCILHAQTGSGKTLAYLLS 105

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 601
           +FS IDF+RSSVQAL+VVP+RELG+QVTKV R+L AK         CTVMALLDGG LKR
Sbjct: 106 IFSTIDFSRSSVQALVVVPTRELGMQVTKVARLLAAK--------ACTVMALLDGGTLKR 157

Query: 602 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 781
            KSW+KAEPP I+VATV SLCQM+E+    L++MR+LVIDEVDF+F SSKQV  LRK+L 
Sbjct: 158 QKSWVKAEPPAIIVATVASLCQMVERRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILT 217

Query: 782 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
            YS   +RQT+ ASASIPQHNRFLHDCVQ KWTK DVVHVHV+PV+PMPS L HK+VIC
Sbjct: 218 SYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKGDVVHVHVHPVQPMPSHLCHKYVIC 276


>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
           gi|557521726|gb|ESR33093.1| hypothetical protein
           CICLE_v10004897mg [Citrus clementina]
          Length = 473

 Score =  348 bits (893), Expect = 2e-93
 Identities = 176/270 (65%), Positives = 216/270 (80%), Gaps = 1/270 (0%)
 Frame = +2

Query: 152 LSSGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQ 331
           LSS AV +  L A   G   +S        TLR+LC+G VP H+L+R +E GY  PT++Q
Sbjct: 48  LSSSAVSTEELAA---GTGNNSL-------TLRELCQGHVPEHVLRRMDETGYVLPTDIQ 97

Query: 332 CLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSRELGIQVTKV 511
             +LP+L S RDC+LHAQTGSGKTL YLL +FS ++  RS+VQA+IVVP+RELG+QVTKV
Sbjct: 98  REALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKV 157

Query: 512 VRVLTAKPVGFEMIHT-CTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQMIEKNIL 688
            RVL AKP   ++ H  CTVMALLDGGML+RHKSWLKAEPP IVVAT+GSLCQ+IEK+I 
Sbjct: 158 ARVLAAKPSDTDLEHKPCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIF 217

Query: 689 KLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQ 868
           KLE++++LVIDEVDF+F+SSKQV  L+KLL  YS+ + RQTV ASASIPQH RFLHDC+Q
Sbjct: 218 KLESVQVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQ 277

Query: 869 QKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
           QKWTK+DVVHVHVN ++P+PS LHH+FVIC
Sbjct: 278 QKWTKSDVVHVHVNAIKPLPSCLHHRFVIC 307


>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum lycopersicum]
          Length = 459

 Score =  347 bits (889), Expect = 5e-93
 Identities = 171/242 (70%), Positives = 200/242 (82%), Gaps = 1/242 (0%)
 Frame = +2

Query: 236 TPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 415
           T TLR+LC G V  H++ RAEEIGY  PT VQ  +LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 56  TTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPFLFSGRDCVLHAQTGSGKTLAYL 115

Query: 416 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 592
           L V S +D  RS+VQALIVVP+RELG+QVTKV R+L A P   E  + +CTVMALLDGGM
Sbjct: 116 LQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALLDGGM 175

Query: 593 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 772
           LKRHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL+  ++LV+DEVDFMF+SSK+V  L++
Sbjct: 176 LKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKR 235

Query: 773 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 952
           LL  YS+   RQT+ ASASIPQH RFL+DC+QQKWT+ DVVHVHVN VEPMPS LHH+FV
Sbjct: 236 LLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMPSCLHHRFV 295

Query: 953 IC 958
           +C
Sbjct: 296 VC 297


>dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 448

 Score =  347 bits (889), Expect = 5e-93
 Identities = 169/239 (70%), Positives = 198/239 (82%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR++C G+VP H+LQRAE++GY  PT VQ  SLP+LLSG+DC+LHAQTGSGKTLAYLLA
Sbjct: 49  TLREVCSGRVPDHVLQRAEDVGYVSPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLA 108

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 601
           VF+AID  RSSVQAL++VP+RELGIQVTKV R+L AK        TC VMALLDGGML R
Sbjct: 109 VFAAIDVGRSSVQALVIVPTRELGIQVTKVARLLAAK--------TCNVMALLDGGMLTR 160

Query: 602 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 781
            KSWLKAEPP I+VATV SLCQM+EK    L +++ILVIDEVDF+F S+KQV  LRK+L 
Sbjct: 161 QKSWLKAEPPAIIVATVASLCQMVEKRAFSLGSIKILVIDEVDFIFGSTKQVNSLRKILN 220

Query: 782 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
            Y+   +RQT+ ASASIPQHNRF+HDCVQ KWTK+DVVHVHVNPV+PMPS LHH +VIC
Sbjct: 221 SYTAASSRQTIFASASIPQHNRFVHDCVQHKWTKSDVVHVHVNPVQPMPSHLHHTYVIC 279


>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum tuberosum]
          Length = 462

 Score =  346 bits (888), Expect = 7e-93
 Identities = 170/242 (70%), Positives = 201/242 (83%), Gaps = 1/242 (0%)
 Frame = +2

Query: 236 TPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 415
           T TLR+LC G V  H+++RAEE+GY  PT VQ  +LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 56  TTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQTGSGKTLAYL 115

Query: 416 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 592
           L V S +D  RS+VQALIVVP+RELG+QVTKV R+L A P   E  + +CTVMALLDGGM
Sbjct: 116 LQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALLDGGM 175

Query: 593 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 772
           LKRHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL+  ++LV+DEVDFMF+SSK+V  L++
Sbjct: 176 LKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKR 235

Query: 773 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 952
           LL  YS+   RQT+ ASASIPQH RFL+DC+QQKWT+ DVVHVHVN VEPMPS LHH+FV
Sbjct: 236 LLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMPSCLHHRFV 295

Query: 953 IC 958
           +C
Sbjct: 296 VC 297


>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 473

 Score =  346 bits (887), Expect = 9e-93
 Identities = 166/240 (69%), Positives = 205/240 (85%), Gaps = 1/240 (0%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR+LC+G VP H+L+R +E GY  PT++Q  +LP+L S RDC+LHAQTGSGKTL YLL 
Sbjct: 68  TLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLL 127

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHT-CTVMALLDGGMLK 598
           +FS ++  RS+VQA+IVVP+RELG+QVTKV RVL AKP   ++ H  CTVMALLDGGML+
Sbjct: 128 IFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187

Query: 599 RHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLL 778
           RHKSWLKAEPP IVVAT+GSLCQ+IEK+I KLE++++LVIDEVDF+F+SSKQV  L+KLL
Sbjct: 188 RHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLL 247

Query: 779 GLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
             YS+ + RQTV ASASIPQH RFLH+C+QQKWTK+DVVHVHVN ++P+PS LHH+FVIC
Sbjct: 248 ASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVIC 307


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  345 bits (885), Expect = 1e-92
 Identities = 170/242 (70%), Positives = 200/242 (82%), Gaps = 1/242 (0%)
 Frame = +2

Query: 236 TPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 415
           T T R+LC G VP H+++R EE+GY  PT VQ L+LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 63  TATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLAYL 122

Query: 416 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 592
           L + S ID  RS+VQALIVVP+RELG+QVTKV R L AKP   +    +CTVMALLDGGM
Sbjct: 123 LQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDGGM 182

Query: 593 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 772
           L RHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL++ ++LV+DEVDFMF+SSK++  L++
Sbjct: 183 LNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKR 242

Query: 773 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 952
           LL  YS+   RQT+ ASASIPQH RFL+DCVQQKWTK DVVHVHVN VEPMPS LHH+FV
Sbjct: 243 LLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFV 302

Query: 953 IC 958
           +C
Sbjct: 303 VC 304


>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 365

 Score =  345 bits (885), Expect = 1e-92
 Identities = 170/242 (70%), Positives = 200/242 (82%), Gaps = 1/242 (0%)
 Frame = +2

Query: 236 TPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 415
           T T R+LC G VP H+++R EE+GY  PT VQ L+LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 63  TATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLAYL 122

Query: 416 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 592
           L + S ID  RS+VQALIVVP+RELG+QVTKV R L AKP   +    +CTVMALLDGGM
Sbjct: 123 LQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDGGM 182

Query: 593 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 772
           L RHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL++ ++LV+DEVDFMF+SSK++  L++
Sbjct: 183 LNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKR 242

Query: 773 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 952
           LL  YS+   RQT+ ASASIPQH RFL+DCVQQKWTK DVVHVHVN VEPMPS LHH+FV
Sbjct: 243 LLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFV 302

Query: 953 IC 958
           +C
Sbjct: 303 VC 304


>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
          Length = 464

 Score =  344 bits (882), Expect = 3e-92
 Identities = 170/240 (70%), Positives = 201/240 (83%), Gaps = 1/240 (0%)
 Frame = +2

Query: 242 TLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 421
           TLR LC G VP H++   EE+GY +PT+VQ  +LP+L SGRDCVLHAQTGSGKTL YLL 
Sbjct: 66  TLRRLCEGLVPEHVV---EEVGYIEPTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLL 122

Query: 422 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLK 598
           +FS ++  RS+VQALIVVP+RELG+QVTKV R L AKP+  ++   +C+VMALLDGG L+
Sbjct: 123 IFSVVNTQRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQKSCSVMALLDGGTLR 182

Query: 599 RHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLL 778
           RHKSWLKAEPP +VVAT+GSLCQ ++K IL LE+MR+LVIDEVDF+F+SSKQV  LRKLL
Sbjct: 183 RHKSWLKAEPPTVVVATIGSLCQQLDKQILTLESMRVLVIDEVDFIFNSSKQVSSLRKLL 242

Query: 779 GLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
             YSTI  RQTV ASASIPQH RFLH+CVQQKWTK++VVHVHVNP+EPMPS LHH FVIC
Sbjct: 243 TSYSTISNRQTVFASASIPQHRRFLHECVQQKWTKSNVVHVHVNPIEPMPSCLHHNFVIC 302


>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
          Length = 473

 Score =  343 bits (880), Expect = 6e-92
 Identities = 186/288 (64%), Positives = 219/288 (76%), Gaps = 9/288 (3%)
 Frame = +2

Query: 122 SLGFPCRLFSLSSGAVPS--------NALPAISCGGARSSRDPYLETPTLRDLCRGKVPG 277
           SL    RLFS S+G V +        N+ P  +  G  S  +P+    TLR +C+  VP 
Sbjct: 32  SLNHSPRLFS-SNGFVSNCSPIQALLNSTPITTEAG--SEPEPF----TLRQICQSHVPD 84

Query: 278 HILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSV 457
           H+L + EE+G+  PT VQ  +LP L SGRDC+LHAQTGSGKTL YLL VFS ++  RS+V
Sbjct: 85  HVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQTGSGKTLTYLLLVFSIVNARRSAV 144

Query: 458 QALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLKRHKSWLKAEPPQ 634
           QALIVVP+RELG+QVTKV R+L  KP   E+   +CTVMALLDGGML RHKSWLKAEPP 
Sbjct: 145 QALIVVPTRELGMQVTKVARMLATKPKEGELEQKSCTVMALLDGGMLMRHKSWLKAEPPT 204

Query: 635 IVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTV 814
           IVVAT+GSLCQM+EK+++KLEAMR+LVIDEVDFMF SSKQV  LRKLL  YS+I+TRQTV
Sbjct: 205 IVVATIGSLCQMLEKHMIKLEAMRVLVIDEVDFMF-SSKQVSSLRKLLTSYSSINTRQTV 263

Query: 815 LASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
            ASASIPQH  FL  C+QQKWTKND +HVHVNPVEPMPS LHH+FVIC
Sbjct: 264 FASASIPQHKIFLDKCIQQKWTKNDTIHVHVNPVEPMPSCLHHRFVIC 311


>ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [Amborella trichopoda]
           gi|548839100|gb|ERM99414.1| hypothetical protein
           AMTR_s00131p00060240 [Amborella trichopoda]
          Length = 507

 Score =  341 bits (875), Expect = 2e-91
 Identities = 173/268 (64%), Positives = 213/268 (79%), Gaps = 5/268 (1%)
 Frame = +2

Query: 170 PSNALPAISCGGARSSRD-PY---LETPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCL 337
           P    P ++C  + ++ + PY     + +LR++C G+VP  ILQRAEEIG+ +PT+VQ  
Sbjct: 70  PQAPHPHLNCFCSHNNNEAPYSLAASSSSLREICCGRVPETILQRAEEIGFVRPTHVQQR 129

Query: 338 SLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVR 517
           SLP LLSGRDC+LHAQTGSGKTLAYLL + SAID  +S+VQAL+VVPSRELG+QVTKV R
Sbjct: 130 SLPTLLSGRDCILHAQTGSGKTLAYLLVILSAIDVQQSAVQALVVVPSRELGMQVTKVAR 189

Query: 518 VLTAKPVGFEMIH-TCTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKL 694
           +L  + + F M   + TVMALLDGGMLKRHK W KAEPPQIVVAT+ SLCQMIEK  LKL
Sbjct: 190 MLATRSMEFGMEQRSYTVMALLDGGMLKRHKIWFKAEPPQIVVATIDSLCQMIEKQDLKL 249

Query: 695 EAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQK 874
           +++R+LVIDEVDF+F+SSKQV+ LRKLL  YS  D RQT+ +SASIPQH  F+HDC+QQK
Sbjct: 250 DSLRVLVIDEVDFLFNSSKQVHSLRKLLTSYSAADRRQTIFSSASIPQHKHFVHDCIQQK 309

Query: 875 WTKNDVVHVHVNPVEPMPSQLHHKFVIC 958
           WTK DVVH+H++PVEPMPS+L H FV C
Sbjct: 310 WTKRDVVHIHLHPVEPMPSRLCHIFVTC 337


>gb|ESW25915.1| hypothetical protein PHAVU_003G0764001g, partial [Phaseolus
           vulgaris]
          Length = 340

 Score =  341 bits (874), Expect = 3e-91
 Identities = 163/244 (66%), Positives = 201/244 (82%), Gaps = 1/244 (0%)
 Frame = +2

Query: 230 LETPTLRDLCRGKVPGHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLA 409
           L TPTLR+LC+  VP HILQR E+IGY  PT++Q  +LP L SGRDC+LHAQTGSGKTL 
Sbjct: 69  LTTPTLRELCQAHVPEHILQRMEDIGYVMPTDIQREALPYLFSGRDCILHAQTGSGKTLT 128

Query: 410 YLLAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDG 586
           YLL + S I+  +SSVQAL+VVP+RELG+QVTKV R L AKP G    H +C++MALLDG
Sbjct: 129 YLLLINSIINAAKSSVQALVVVPTRELGMQVTKVARTLAAKPTGVVGEHKSCSIMALLDG 188

Query: 587 GMLKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPL 766
           G LKRHK+WLKAEPP +VVATVGSLCQM+E++   LE +R+L++DEVD +F+SSKQV  L
Sbjct: 189 GTLKRHKTWLKAEPPTVVVATVGSLCQMLERHTFSLETVRVLIVDEVDCIFNSSKQVSSL 248

Query: 767 RKLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHK 946
           RK+L  YS+ + RQTV ASASIPQHNRF+HDC+QQKWTK DVVH+HV+ VEPMPS+L+H+
Sbjct: 249 RKILTSYSSCNNRQTVFASASIPQHNRFIHDCLQQKWTKRDVVHIHVSAVEPMPSRLYHR 308

Query: 947 FVIC 958
           F+ C
Sbjct: 309 FIRC 312