BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00016473
         (984 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   169   7e-80
ref|XP_006828170.1| hypothetical protein AMTR_s00023p00113610 [A...   163   1e-77
ref|NP_001275192.1| spliceosomal protein [Solanum tuberosum] gi|...   160   9e-77
ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotei...   167   1e-74
ref|XP_004490682.1| PREDICTED: U2 small nuclear ribonucleoprotei...   166   4e-73
ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arab...   159   2e-72
ref|XP_006410137.1| hypothetical protein EUTSA_v10017204mg [Eutr...   159   2e-71
ref|NP_180585.1| U2 small nuclear ribonucleoprotein B''  [Arabid...   155   4e-70
gb|EMJ07020.1| hypothetical protein PRUPE_ppa010847mg [Prunus pe...   156   6e-70
gb|EMJ07019.1| hypothetical protein PRUPE_ppa010847mg [Prunus pe...   156   6e-70
gb|EXB56616.1| U2 small nuclear ribonucleoprotein B'' [Morus not...   147   7e-70
ref|XP_006296407.1| hypothetical protein CARUB_v10025584mg [Caps...   149   5e-69
gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Ara...   150   1e-68
ref|NP_172177.3| U2 small nuclear ribonucleoprotein B'' 2 [Arabi...   155   3e-68
gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis ...   155   9e-68
gb|EPS58040.1| spliceosomal protein, partial [Genlisea aurea]         135   2e-62
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...   135   8e-62
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei...   134   8e-62
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu...   133   8e-62
ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotei...   130   2e-58

>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  169 bits (429), Expect(2) = 7e-80
 Identities = 84/104 (80%), Positives = 89/104 (85%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGDIPPNQ+IYI            KRSLY LFSQYGRILD+VALKTPKLRGQAWVVF+
Sbjct: 1   MLSGDIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAASNAVRQMQ FPFYDKPMR+QYAK+KSDCVAK DGTFVPR
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPR 104



 Score =  155 bits (393), Expect(2) = 7e-80
 Identities = 74/90 (82%), Positives = 82/90 (91%)
 Frame = -2

Query: 587 RQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFS 408
           RQ   G++EP AAPNNILFIQNLPH+TT M+L++LFQQYPGF EVRMIEAKPGIAFVEF 
Sbjct: 145 RQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFE 204

Query: 407 DDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           DDVQSS+AM+ALQGFKITPQNPMAI YAKK
Sbjct: 205 DDVQSSMAMEALQGFKITPQNPMAIAYAKK 234


>ref|XP_006828170.1| hypothetical protein AMTR_s00023p00113610 [Amborella trichopoda]
           gi|548832817|gb|ERM95586.1| hypothetical protein
           AMTR_s00023p00113610 [Amborella trichopoda]
          Length = 234

 Score =  163 bits (413), Expect(2) = 1e-77
 Identities = 80/104 (76%), Positives = 88/104 (84%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGDIPPNQTIY+            KRSLYALFSQ+GRI D+VALKTPKLRGQAWVVF+
Sbjct: 1   MLSGDIPPNQTIYVRNLNEKVKKEELKRSLYALFSQFGRISDVVALKTPKLRGQAWVVFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           E+TAAS AVRQMQ FPFYDKPMRIQYAK+KSDC+AK DGT+VPR
Sbjct: 61  EITAASAAVRQMQSFPFYDKPMRIQYAKTKSDCIAKADGTYVPR 104



 Score =  154 bits (389), Expect(2) = 1e-77
 Identities = 72/94 (76%), Positives = 85/94 (90%)
 Frame = -2

Query: 599 SQVPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAF 420
           S   R  KPG+QE AA+PN+ILFIQNLPHETT M+L++LFQQYPGF EVRM+EAKPGI+F
Sbjct: 141 SHTSRPGKPGAQEGAASPNSILFIQNLPHETTSMMLQMLFQQYPGFKEVRMVEAKPGISF 200

Query: 419 VEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           VE++D++Q+SIAMQALQGFKITPQNPM ITYAKK
Sbjct: 201 VEYADEIQASIAMQALQGFKITPQNPMGITYAKK 234


>ref|NP_001275192.1| spliceosomal protein [Solanum tuberosum] gi|169589|gb|AAA33847.1|
           spliceosomal protein [Solanum tuberosum]
          Length = 231

 Score =  160 bits (405), Expect(2) = 9e-77
 Identities = 79/101 (78%), Positives = 86/101 (85%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+GDIPPNQTIYI            KRSLY LFSQYGRI+DIVALKTPKLRGQ+WVVF+
Sbjct: 2   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQSWVVFS 61

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTF 649
           EVTAASNAVRQMQ FPFYDKPMRIQYAKSKSDC+AK +GT+
Sbjct: 62  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAKAEGTY 102



 Score =  154 bits (390), Expect(2) = 9e-77
 Identities = 76/90 (84%), Positives = 82/90 (91%)
 Frame = -2

Query: 587 RQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFS 408
           RQ KP +Q+  A PNNILFIQNLPHETT M+LE+LF+QYPGF EVRMIEAKPGIAFVEF 
Sbjct: 143 RQGKPSAQD-VAEPNNILFIQNLPHETTSMMLEVLFKQYPGFREVRMIEAKPGIAFVEFD 201

Query: 407 DDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           DDVQSS+AMQALQGFKITPQNPMAITYAKK
Sbjct: 202 DDVQSSVAMQALQGFKITPQNPMAITYAKK 231


>ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
           sativus] gi|449520549|ref|XP_004167296.1| PREDICTED: U2
           small nuclear ribonucleoprotein B'' 2-like [Cucumis
           sativus]
          Length = 231

 Score =  167 bits (422), Expect(2) = 1e-74
 Identities = 82/104 (78%), Positives = 89/104 (85%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGDIPPNQTIYI            KRSLYALFSQYGRILD+VALKTP+LRGQAWV F+
Sbjct: 1   MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAASNAVRQMQ FPFY+KPMRIQYAK+KSDC+AK DG+FVPR
Sbjct: 61  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKADGSFVPR 104



 Score =  140 bits (354), Expect(2) = 1e-74
 Identities = 69/90 (76%), Positives = 79/90 (87%)
 Frame = -2

Query: 587 RQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFS 408
           R A P + E  A PNNILFI+NLPHET+ M+L++LFQQYPGF EVRMIEAKPGIAFVEF 
Sbjct: 144 RHANPSATE--ATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFE 201

Query: 407 DDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           DDVQSS+AMQALQGFKI PQ+PMAI++AKK
Sbjct: 202 DDVQSSMAMQALQGFKIDPQHPMAISFAKK 231


>ref|XP_004490682.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cicer
           arietinum]
          Length = 230

 Score =  166 bits (419), Expect(2) = 4e-73
 Identities = 81/104 (77%), Positives = 89/104 (85%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGDIPPNQTIY+            KRSLY LFSQYGRILDIVALKTPKLRGQAWV F+
Sbjct: 1   MLSGDIPPNQTIYVKNLNEKVKKEELKRSLYCLFSQYGRILDIVALKTPKLRGQAWVCFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVT+ASNAVRQMQ FPFY+KPMRIQYAKSKSDC+AKE+G++VPR
Sbjct: 61  EVTSASNAVRQMQNFPFYEKPMRIQYAKSKSDCIAKEEGSYVPR 104



 Score =  137 bits (344), Expect(2) = 4e-73
 Identities = 67/88 (76%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
 Frame = -2

Query: 578 KPGS-QEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFSDD 402
           +PGS  + A APNNILFI+NLP+ETT  +LE+LF+QYPGF EVR+IEAKPGIAFV+F DD
Sbjct: 143 RPGSGAQEAVAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFEDD 202

Query: 401 VQSSIAMQALQGFKITPQNPMAITYAKK 318
           VQSS+AMQALQGFKITPQNPM I +AKK
Sbjct: 203 VQSSMAMQALQGFKITPQNPMIINFAKK 230


>ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
           lyrata] gi|297326934|gb|EFH57354.1| hypothetical protein
           ARALYDRAFT_320780 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  159 bits (401), Expect(2) = 2e-72
 Identities = 77/104 (74%), Positives = 87/104 (83%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPNQ+IYI            KRSLY LFSQ+GRILD+VALKTPKLRGQAWV F+
Sbjct: 1   MLTADIPPNQSIYIQNLNEKIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAASNAVRQMQ FPFYDKPMR+QYAK+KSDC+AK +GTFVP+
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPK 104



 Score =  142 bits (357), Expect(2) = 2e-72
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = -2

Query: 593 VPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVE 414
           VP  + P S + A  PNNILFIQNLPHETT M+L++LF+QYPGF E+RMI+AKPGIAFVE
Sbjct: 141 VPAPSFPPSGQEAMPPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVE 200

Query: 413 FSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           + DDVQ+SIAMQ LQGFKITPQNPM I++AKK
Sbjct: 201 YEDDVQASIAMQPLQGFKITPQNPMVISFAKK 232


>ref|XP_006410137.1| hypothetical protein EUTSA_v10017204mg [Eutrema salsugineum]
           gi|557111306|gb|ESQ51590.1| hypothetical protein
           EUTSA_v10017204mg [Eutrema salsugineum]
          Length = 228

 Score =  159 bits (403), Expect(2) = 2e-71
 Identities = 79/104 (75%), Positives = 85/104 (81%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPNQ+IYI            KRSLY LFSQ+GRILD+VALKTPKLRGQAWV F+
Sbjct: 1   MLTADIPPNQSIYIKNLNEKIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVAFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAASNAVRQMQ FPFYDKPMRIQYAKSKSDC+ K DGTFV R
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCITKADGTFVSR 104



 Score =  137 bits (345), Expect(2) = 2e-71
 Identities = 66/87 (75%), Positives = 77/87 (88%)
 Frame = -2

Query: 578 KPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFSDDV 399
           +P  QE A  PNNILFIQNLPHETT ++L++LF QYPGF E+RMI+AKPGIAFVE+ DDV
Sbjct: 143 QPSGQE-AMPPNNILFIQNLPHETTSVMLQLLFAQYPGFKEIRMIDAKPGIAFVEYEDDV 201

Query: 398 QSSIAMQALQGFKITPQNPMAITYAKK 318
           QSS+AMQALQGFKITPQNPM I++AKK
Sbjct: 202 QSSMAMQALQGFKITPQNPMIISFAKK 228


>ref|NP_180585.1| U2 small nuclear ribonucleoprotein B''  [Arabidopsis thaliana]
           gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2
           small nuclear ribonucleoprotein B''; Short=U2 snRNP B''
           gi|2347192|gb|AAC16931.1| putative small nuclear
           ribonucleoprotein U2B [Arabidopsis thaliana]
           gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis
           thaliana] gi|110743428|dbj|BAE99600.1| putative small
           nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
           gi|330253269|gb|AEC08363.1| U2 small nuclear
           ribonucleoprotein B'' [Arabidopsis thaliana]
          Length = 232

 Score =  155 bits (392), Expect(2) = 4e-70
 Identities = 75/104 (72%), Positives = 86/104 (82%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPNQ+IYI            KRSLY LFSQ+GRILD+VALKTPKLRGQAWV F+
Sbjct: 1   MLTADIPPNQSIYIQNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAA +AVRQMQ FPFYDKPMR+QYAK+KSDC+AK +GTFVP+
Sbjct: 61  EVTAAGHAVRQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPK 104



 Score =  137 bits (345), Expect(2) = 4e-70
 Identities = 65/92 (70%), Positives = 77/92 (83%)
 Frame = -2

Query: 593 VPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVE 414
           VP  +   S +    PNNILFIQNLPHETT M+L++LF+QYPGF E+RMI+AKPGIAFVE
Sbjct: 141 VPAPSFQPSGQETMPPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVE 200

Query: 413 FSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           + DDVQ+SIAMQ LQGFKITPQNPM I++AKK
Sbjct: 201 YEDDVQASIAMQPLQGFKITPQNPMVISFAKK 232


>gb|EMJ07020.1| hypothetical protein PRUPE_ppa010847mg [Prunus persica]
          Length = 233

 Score =  156 bits (395), Expect(2) = 6e-70
 Identities = 77/104 (74%), Positives = 84/104 (80%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGDIPPNQTIYI            KRSLY LFSQYG+ILD+VALKTPKLRGQAWV F 
Sbjct: 1   MLSGDIPPNQTIYIKNLNEKIKKEELKRSLYCLFSQYGKILDVVALKTPKLRGQAWVAFL 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVT+ASNAVRQMQ FPFYDKPMRIQYAK+KSDC+A  DG+  P+
Sbjct: 61  EVTSASNAVRQMQNFPFYDKPMRIQYAKTKSDCIADADGSLGPK 104



 Score =  135 bits (341), Expect(2) = 6e-70
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = -2

Query: 587 RQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFS 408
           RQ  P + E AAAPN+ILFI+NLPHETT  +LE+LF+QYPGF EVR+IEAKPGIAFVEF 
Sbjct: 145 RQGNPNAHE-AAAPNSILFIENLPHETTSAMLELLFKQYPGFREVRLIEAKPGIAFVEFE 203

Query: 407 DDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           DD+ SS+AM ALQGF+ITPQN MAI++AKK
Sbjct: 204 DDIHSSMAMTALQGFRITPQNSMAISFAKK 233


>gb|EMJ07019.1| hypothetical protein PRUPE_ppa010847mg [Prunus persica]
          Length = 232

 Score =  156 bits (395), Expect(2) = 6e-70
 Identities = 77/104 (74%), Positives = 84/104 (80%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGDIPPNQTIYI            KRSLY LFSQYG+ILD+VALKTPKLRGQAWV F 
Sbjct: 1   MLSGDIPPNQTIYIKNLNEKIKKEELKRSLYCLFSQYGKILDVVALKTPKLRGQAWVAFL 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVT+ASNAVRQMQ FPFYDKPMRIQYAK+KSDC+A  DG+  P+
Sbjct: 61  EVTSASNAVRQMQNFPFYDKPMRIQYAKTKSDCIADADGSLGPK 104



 Score =  135 bits (341), Expect(2) = 6e-70
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = -2

Query: 587 RQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFS 408
           RQ  P + E AAAPN+ILFI+NLPHETT  +LE+LF+QYPGF EVR+IEAKPGIAFVEF 
Sbjct: 144 RQGNPNAHE-AAAPNSILFIENLPHETTSAMLELLFKQYPGFREVRLIEAKPGIAFVEFE 202

Query: 407 DDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           DD+ SS+AM ALQGF+ITPQN MAI++AKK
Sbjct: 203 DDIHSSMAMTALQGFRITPQNSMAISFAKK 232


>gb|EXB56616.1| U2 small nuclear ribonucleoprotein B'' [Morus notabilis]
          Length = 267

 Score =  147 bits (371), Expect(2) = 7e-70
 Identities = 74/90 (82%), Positives = 81/90 (90%)
 Frame = -2

Query: 587 RQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEFS 408
           RQ    +QE AAAPNNILFI+NLPHET  M+LE+LF+QYPGF EVRMIEAKPGIAFVEF 
Sbjct: 179 RQGNMRAQE-AAAPNNILFIENLPHETNSMMLELLFRQYPGFREVRMIEAKPGIAFVEFE 237

Query: 407 DDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           DDVQSS+AMQALQGFKITPQNPMAIT+AKK
Sbjct: 238 DDVQSSMAMQALQGFKITPQNPMAITFAKK 267



 Score =  144 bits (364), Expect(2) = 7e-70
 Identities = 81/139 (58%), Positives = 87/139 (62%), Gaps = 35/139 (25%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           MLSGD PPNQTIYI            KRSLYALFSQYGRILD+VALKT KLRGQAW+ F+
Sbjct: 1   MLSGDTPPNQTIYIKNLNEKIKKEELKRSLYALFSQYGRILDVVALKTLKLRGQAWIAFS 60

Query: 771 EVTAASNAVRQMQRFP-----------------------------------FYDKPMRIQ 697
           EVTAASNAVRQMQ FP                                   FYDKPMRIQ
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMTLKLRGQAWIAFSEVTAASNAVRQMQNFPFYDKPMRIQ 120

Query: 696 YAKSKSDCVAKEDGTFVPR 640
           YAK+KSDCVAK +G+FVPR
Sbjct: 121 YAKTKSDCVAKAEGSFVPR 139


>ref|XP_006296407.1| hypothetical protein CARUB_v10025584mg [Capsella rubella]
           gi|482565115|gb|EOA29305.1| hypothetical protein
           CARUB_v10025584mg [Capsella rubella]
          Length = 227

 Score =  149 bits (377), Expect(2) = 5e-69
 Identities = 73/101 (72%), Positives = 82/101 (81%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPNQ+IYI            KRSLY LFSQ+GRILD+VALKT KLRGQAWV F+
Sbjct: 1   MLTADIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQFGRILDVVALKTHKLRGQAWVTFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTF 649
           EVTAASNAVRQMQ FPFYDKPMR+QYAK K+DC+AK +GTF
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRLQYAKEKADCIAKAEGTF 101



 Score =  139 bits (351), Expect(2) = 5e-69
 Identities = 67/91 (73%), Positives = 79/91 (86%)
 Frame = -2

Query: 590 PRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVEF 411
           P   +P  QE A  PNN+LFIQNLPHETT ++L++LF+QYPGF E+RM EAKPGIAFVEF
Sbjct: 138 PPPFQPNGQE-AMPPNNLLFIQNLPHETTSIMLQLLFEQYPGFKEIRMTEAKPGIAFVEF 196

Query: 410 SDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           +DDVQSS+AMQALQGFKITPQNPM I++AKK
Sbjct: 197 ADDVQSSMAMQALQGFKITPQNPMVISFAKK 227


>gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
          Length = 232

 Score =  150 bits (380), Expect(2) = 1e-68
 Identities = 73/104 (70%), Positives = 84/104 (80%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPN +IYI            KRSLY LFSQ+GRILD+VALKTPKLRGQAWV F+
Sbjct: 1   MLTADIPPNHSIYIQNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFS 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAA +AVRQMQ FP YDKPMR+QYAK+KSDC+AK +GTFVP+
Sbjct: 61  EVTAAGHAVRQMQNFPXYDKPMRLQYAKAKSDCLAKAEGTFVPK 104



 Score =  137 bits (345), Expect(2) = 1e-68
 Identities = 65/92 (70%), Positives = 77/92 (83%)
 Frame = -2

Query: 593 VPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVE 414
           VP  +   S +    PNNILFIQNLPHETT M+L++LF+QYPGF E+RMI+AKPGIAFVE
Sbjct: 141 VPAPSFQPSGQETMPPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVE 200

Query: 413 FSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           + DDVQ+SIAMQ LQGFKITPQNPM I++AKK
Sbjct: 201 YEDDVQASIAMQPLQGFKITPQNPMVISFAKK 232


>ref|NP_172177.3| U2 small nuclear ribonucleoprotein B'' 2 [Arabidopsis thaliana]
           gi|332189938|gb|AEE28059.1| U2 small nuclear
           ribonucleoprotein B'' 2 [Arabidopsis thaliana]
          Length = 228

 Score =  155 bits (391), Expect(2) = 3e-68
 Identities = 77/104 (74%), Positives = 85/104 (81%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPNQ+IYI            KRSLY LFSQ+GR+LD+VALKTPKLRGQAWVVF 
Sbjct: 1   MLTADIPPNQSIYIKHINEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFT 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAASNAVRQMQ FPFYDKPMRIQYAKSKSD V K +G+FVP+
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPK 104



 Score =  131 bits (330), Expect(2) = 3e-68
 Identities = 63/92 (68%), Positives = 76/92 (82%)
 Frame = -2

Query: 593 VPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVE 414
           +P   +P  Q+    PNNILFI NLP ET  M+L++LF+QYPGF E+RMIEAKPGIAFVE
Sbjct: 138 MPPPFQPSGQD-TMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVE 196

Query: 413 FSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           + DDVQSS+AMQALQGFKITPQNPM +++AKK
Sbjct: 197 YEDDVQSSMAMQALQGFKITPQNPMVVSFAKK 228


>gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
          Length = 228

 Score =  155 bits (391), Expect(2) = 9e-68
 Identities = 77/104 (74%), Positives = 85/104 (81%)
 Frame = -1

Query: 951 MLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFA 772
           ML+ DIPPNQ+IYI            KRSLY LFSQ+GR+LD+VALKTPKLRGQAWVVF 
Sbjct: 1   MLTADIPPNQSIYIKHISEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFT 60

Query: 771 EVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           EVTAASNAVRQMQ FPFYDKPMRIQYAKSKSD V K +G+FVP+
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPK 104



 Score =  130 bits (326), Expect(2) = 9e-68
 Identities = 62/92 (67%), Positives = 76/92 (82%)
 Frame = -2

Query: 593 VPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAFVE 414
           +P   +P  Q+    PNNILFI NLP ET  M+L++LF+QYPGF E+RMIEAKPGIAFVE
Sbjct: 138 MPPPFQPSGQD-TMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVE 196

Query: 413 FSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           + DDVQSS+AMQALQGFKITP+NPM +++AKK
Sbjct: 197 YEDDVQSSMAMQALQGFKITPRNPMVVSFAKK 228


>gb|EPS58040.1| spliceosomal protein, partial [Genlisea aurea]
          Length = 208

 Score =  135 bits (341), Expect(2) = 2e-62
 Identities = 68/96 (70%), Positives = 77/96 (80%), Gaps = 4/96 (4%)
 Frame = -2

Query: 593 VPRQAKP----GSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGI 426
           V R A P    G Q+    PNNILF++NLP+ET  M+LE+LF+QYPGF EVRM+EAKPGI
Sbjct: 113 VVRPAMPPGVMGQQQSVTEPNNILFVENLPYETNSMMLELLFKQYPGFREVRMVEAKPGI 172

Query: 425 AFVEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           AFVEF DD QSSIAMQ LQGFKIT QNPMAI+YAKK
Sbjct: 173 AFVEFEDDSQSSIAMQDLQGFKITAQNPMAISYAKK 208



 Score =  131 bits (329), Expect(2) = 2e-62
 Identities = 62/74 (83%), Positives = 70/74 (94%)
 Frame = -1

Query: 870 RSLYALFSQYGRILDIVALKTPKLRGQAWVVFAEVTAASNAVRQMQRFPFYDKPMRIQYA 691
           RSLYALFSQ+GRI+DIVALKT KLRGQAWVVF++V AASNAVRQMQ FPFYDKPMRIQYA
Sbjct: 4   RSLYALFSQFGRIVDIVALKTSKLRGQAWVVFSDVPAASNAVRQMQSFPFYDKPMRIQYA 63

Query: 690 KSKSDCVAKEDGTF 649
           K+KSDC+AK +GT+
Sbjct: 64  KTKSDCIAKAEGTY 77


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score =  135 bits (339), Expect(2) = 8e-62
 Identities = 66/94 (70%), Positives = 77/94 (81%)
 Frame = -2

Query: 599 SQVPRQAKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGIAF 420
           SQVP        E  A PN+ILF+QNLPHETT M+L++LF QYPGF EVRM+EAKPGIAF
Sbjct: 149 SQVPYSGGVMVPEAPAPPNSILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAF 208

Query: 419 VEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           VE+SD+VQS++AMQALQGFK+ PQN M ITYAKK
Sbjct: 209 VEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK 242



 Score =  130 bits (326), Expect(2) = 8e-62
 Identities = 63/109 (57%), Positives = 81/109 (74%)
 Frame = -1

Query: 966 LAIAAMLSGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQA 787
           +A       ++PPN TIYI            K+SL A+FSQ+G+IL+++A KT K +GQA
Sbjct: 1   MAEVTTTGNEVPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 60

Query: 786 WVVFAEVTAASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           WVVF EV++A+NA+RQMQ FPFYDKPMRIQYAK+KSD +AK DG+FVPR
Sbjct: 61  WVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPR 109


>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
           lycopersicum]
          Length = 253

 Score =  134 bits (337), Expect(2) = 8e-62
 Identities = 65/101 (64%), Positives = 81/101 (80%)
 Frame = -1

Query: 942 GDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFAEVT 763
           G++PPN TIYI            K+S++A+FSQ+G+IL+++A KT K +GQAWVVF EV+
Sbjct: 17  GEVPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVS 76

Query: 762 AASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           +ASNA+RQMQ FPFYDKPMRIQYAK+KSD VAK DGTFVPR
Sbjct: 77  SASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPR 117



 Score =  130 bits (328), Expect(2) = 8e-62
 Identities = 63/96 (65%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
 Frame = -2

Query: 599 SQVPRQ--AKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGI 426
           SQ+P    AK    E  A PN+ILF+QNLPH++T M+L++LF QYPGF EVRM+EAKPGI
Sbjct: 158 SQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMVEAKPGI 217

Query: 425 AFVEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           AF+E+ D++QS++AMQALQGFKIT  NPM ITYAKK
Sbjct: 218 AFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK 253


>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
           gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
           [Solanum tuberosum]
          Length = 253

 Score =  133 bits (334), Expect(2) = 8e-62
 Identities = 65/101 (64%), Positives = 80/101 (79%)
 Frame = -1

Query: 942 GDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFAEVT 763
           G+ PPN TIYI            K+S++A+FSQ+G+IL+++A KT K +GQAWVVF EV+
Sbjct: 17  GETPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVS 76

Query: 762 AASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           +ASNA+RQMQ FPFYDKPMRIQYAK+KSD VAK DGTFVPR
Sbjct: 77  SASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPR 117



 Score =  132 bits (331), Expect(2) = 8e-62
 Identities = 64/96 (66%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
 Frame = -2

Query: 599 SQVPRQ--AKPGSQEPAAAPNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGI 426
           SQ+P    AK    E  A PN+ILF+QNLPH++T M+L++LF QYPGF EVRMIEAKPGI
Sbjct: 158 SQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAKPGI 217

Query: 425 AFVEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           AF+E+ D++QS++AMQALQGFKIT +NPM ITYAKK
Sbjct: 218 AFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253


>ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
           vesca subsp. vesca]
          Length = 244

 Score =  130 bits (327), Expect(2) = 2e-58
 Identities = 60/100 (60%), Positives = 80/100 (80%)
 Frame = -1

Query: 939 DIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTPKLRGQAWVVFAEVTA 760
           ++P NQTIYI            K++L+A+FSQ+G++LD++A KT K +GQAWVVF +V++
Sbjct: 9   EVPANQTIYINNLNEKIKLDELKKTLHAMFSQFGKVLDVLAFKTLKHKGQAWVVFEDVSS 68

Query: 759 ASNAVRQMQRFPFYDKPMRIQYAKSKSDCVAKEDGTFVPR 640
           A+NA+RQMQ FPFYDKPM+IQYAK+KSD +AK DGTFVPR
Sbjct: 69  ATNAIRQMQSFPFYDKPMKIQYAKTKSDIIAKADGTFVPR 108



 Score =  123 bits (309), Expect(2) = 2e-58
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = -2

Query: 599 SQVPRQAKPGSQEPAAA--PNNILFIQNLPHETTKMVLEILFQQYPGFTEVRMIEAKPGI 426
           SQ+P      S  P A   PNNILF+QNLPHE T  +L++LF QYPGF EVRM+EAKPGI
Sbjct: 149 SQIPYPGGVKSMVPEAPAPPNNILFVQNLPHEATSAMLQMLFCQYPGFKEVRMVEAKPGI 208

Query: 425 AFVEFSDDVQSSIAMQALQGFKITPQNPMAITYAKK 318
           AFVE+ +++QS++AMQ LQ FK+TPQN M ITYAKK
Sbjct: 209 AFVEYENEMQSTMAMQNLQAFKVTPQNSMLITYAKK 244