BLASTX nr result
ID: Zingiber25_contig00016421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00016421
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ15183.1| hypothetical protein PRUPE_ppa013581mg [Prunus pe... 98 1e-18
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm... 94 2e-17
ref|XP_004966205.1| PREDICTED: LSM domain-containing protein 1-l... 93 4e-17
ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus tri... 92 5e-17
ref|XP_002438850.1| hypothetical protein SORBIDRAFT_10g027190 [S... 92 7e-17
ref|XP_003563405.1| PREDICTED: LSM domain-containing protein 1-l... 91 2e-16
dbj|BAK03862.1| predicted protein [Hordeum vulgare subsp. vulgare] 90 3e-16
ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-a... 89 5e-16
gb|AFW68992.1| hypothetical protein ZEAMMB73_981634 [Zea mays] 89 6e-16
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262... 89 6e-16
gb|AFK39204.1| unknown [Lotus japonicus] 89 8e-16
ref|NP_001147152.1| sm protein [Zea mays] gi|195607764|gb|ACG257... 89 8e-16
ref|NP_001058358.1| Os06g0677600 [Oryza sativa Japonica Group] g... 88 1e-15
ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-a... 88 1e-15
gb|EOY27665.1| Small nuclear ribonucleoprotein family protein is... 88 1e-15
gb|EOY27664.1| Small nuclear ribonucleoprotein family protein is... 88 1e-15
ref|XP_004137364.1| PREDICTED: uncharacterized protein LOC101206... 88 1e-15
ref|NP_680719.1| Small nuclear ribonucleoprotein family protein ... 88 1e-15
gb|EMT17253.1| hypothetical protein F775_28150 [Aegilops tauschii] 87 2e-15
ref|XP_004486013.1| PREDICTED: uncharacterized protein LOC101510... 87 2e-15
>gb|EMJ15183.1| hypothetical protein PRUPE_ppa013581mg [Prunus persica]
Length = 115
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/81 (64%), Positives = 58/81 (71%)
Frame = -3
Query: 257 EMEEAESFSNPSFLQDVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHC 78
E E AE+ +Q S+ S G DES AV + RKLLFRR+L+G DGRFFLG FHC
Sbjct: 2 EQEAAETL-----VQAASSDGSNPKGPDESEAVNRARKLLFRRMLVGIRDGRFFLGNFHC 56
Query: 77 IDKQGNIILQDAVEYRHTRRS 15
IDKQGNIILQDAVEYR TRRS
Sbjct: 57 IDKQGNIILQDAVEYRSTRRS 77
>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
gi|223541066|gb|EEF42622.1| conserved hypothetical
protein [Ricinus communis]
Length = 118
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/61 (70%), Positives = 54/61 (88%)
Frame = -3
Query: 197 ASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 18
+S++S S+ S V+++RKLLFR++L+G DGRFFLGTFHCIDKQGNIILQDAVEYR TRR
Sbjct: 18 SSDKSNSNSSGPVSRVRKLLFRKMLVGIKDGRFFLGTFHCIDKQGNIILQDAVEYRSTRR 77
Query: 17 S 15
+
Sbjct: 78 T 78
>ref|XP_004966205.1| PREDICTED: LSM domain-containing protein 1-like [Setaria italica]
Length = 122
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/68 (66%), Positives = 51/68 (75%)
Frame = -3
Query: 206 STRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 27
ST + SPAV +LRKLLFRR+LIG +DGR+FLG FHCIDKQGNIILQDAVEYR
Sbjct: 21 STPVPLDAAGSSSPAVTKLRKLLFRRMLIGVNDGRYFLGLFHCIDKQGNIILQDAVEYRS 80
Query: 26 TRRSGDPS 3
R S P+
Sbjct: 81 ARHSSPPT 88
>ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222869442|gb|EEF06573.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 109
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -3
Query: 206 STRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 27
ST+A+E S SD V++ RKLLFRR+L+G DGRFFLG+FHCIDKQGNIILQDAVEYR+
Sbjct: 10 STQATESSSSD---IVSRARKLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQDAVEYRN 66
Query: 26 TRRS 15
T RS
Sbjct: 67 THRS 70
>ref|XP_002438850.1| hypothetical protein SORBIDRAFT_10g027190 [Sorghum bicolor]
gi|241917073|gb|EER90217.1| hypothetical protein
SORBIDRAFT_10g027190 [Sorghum bicolor]
Length = 126
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -3
Query: 191 ERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRRSG 12
+ +GS SPAVA+LRKLLFRR+LIG +DGR+F G FHCIDKQGNIILQDAVEYR R
Sbjct: 29 DAAGSSSSPAVAKLRKLLFRRMLIGVNDGRYFHGLFHCIDKQGNIILQDAVEYRSAARHC 88
Query: 11 DP 6
P
Sbjct: 89 SP 90
>ref|XP_003563405.1| PREDICTED: LSM domain-containing protein 1-like [Brachypodium
distachyon]
Length = 123
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/81 (56%), Positives = 56/81 (69%)
Frame = -3
Query: 248 EAESFSNPSFLQDVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDK 69
+ ++F P S+ S + S S VA+L+KLLFRR+LIG +DGR+FLG FHCIDK
Sbjct: 6 DGQAFLGPEATYLNSSTTSVDTTSSSSQHVAKLQKLLFRRMLIGVNDGRYFLGLFHCIDK 65
Query: 68 QGNIILQDAVEYRHTRRSGDP 6
QGNIILQDAVEYR R S P
Sbjct: 66 QGNIILQDAVEYRSARHSPSP 86
>dbj|BAK03862.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 126
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -3
Query: 212 DVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEY 33
D S +++ +G S V+ LRKLLFRR+L+G +DGR+FLG FHC+DKQGNIILQDAVEY
Sbjct: 20 DGSAASADAAGGSGSQHVSTLRKLLFRRMLVGVNDGRYFLGLFHCVDKQGNIILQDAVEY 79
Query: 32 RHTRRS 15
R RRS
Sbjct: 80 RSARRS 85
>ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like isoform 1 [Solanum lycopersicum]
gi|460398877|ref|XP_004244973.1| PREDICTED: small
nuclear ribonucleoprotein-associated protein N-like
isoform 2 [Solanum lycopersicum]
Length = 118
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = -3
Query: 224 SFLQDVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQD 45
++L DV + S + ++ S V+ ++KLL+RR+L+G SDGRFFLGTF+CIDKQGNIILQD
Sbjct: 8 TYLSDVGS--SNQFETNSSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQD 65
Query: 44 AVEYRHTRRS 15
AVEYR TRRS
Sbjct: 66 AVEYRSTRRS 75
>gb|AFW68992.1| hypothetical protein ZEAMMB73_981634 [Zea mays]
Length = 122
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/68 (67%), Positives = 53/68 (77%)
Frame = -3
Query: 206 STRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 27
ST + +GS SPAVA+LRKLLFRR+LIG +DGR+F G FHCIDKQGNIILQDAVEYR
Sbjct: 22 STTHVDAAGSS-SPAVAKLRKLLFRRMLIGVNDGRYFHGLFHCIDKQGNIILQDAVEYRS 80
Query: 26 TRRSGDPS 3
R P+
Sbjct: 81 ARHCLPPT 88
>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
Length = 116
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = -3
Query: 209 VSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYR 30
+ +SE S + S V ++R LLFRR+L+G SDGRFFLG+FHC+DKQGNIILQD VEYR
Sbjct: 12 IHVESSEGSNPNGSNPVTKVRMLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYR 71
Query: 29 HTRRS 15
TRRS
Sbjct: 72 STRRS 76
>gb|AFK39204.1| unknown [Lotus japonicus]
Length = 111
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -3
Query: 179 SDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRRS 15
SD S V+++RKLLFRR+L+G DGRFFLG F+CIDKQGNIILQDAVEYR TRRS
Sbjct: 16 SDSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRS 70
>ref|NP_001147152.1| sm protein [Zea mays] gi|195607764|gb|ACG25712.1| sm protein [Zea
mays] gi|195627350|gb|ACG35505.1| sm protein [Zea mays]
gi|413943367|gb|AFW76016.1| sm protein isoform 1 [Zea
mays] gi|413943368|gb|AFW76017.1| sm protein isoform 2
[Zea mays]
Length = 120
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/70 (61%), Positives = 50/70 (71%)
Frame = -3
Query: 212 DVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEY 33
D +S SP+VA+LRKLLFRR+LIG +DGR+F G FHCIDKQGNIILQDAVEY
Sbjct: 17 DTYRNSSTAPVGSSSPSVAKLRKLLFRRMLIGVNDGRYFHGLFHCIDKQGNIILQDAVEY 76
Query: 32 RHTRRSGDPS 3
R R P+
Sbjct: 77 RSARHCSPPT 86
>ref|NP_001058358.1| Os06g0677600 [Oryza sativa Japonica Group]
gi|52076623|dbj|BAD45524.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|52076909|dbj|BAD45921.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|113596398|dbj|BAF20272.1| Os06g0677600 [Oryza sativa
Japonica Group] gi|125556469|gb|EAZ02075.1| hypothetical
protein OsI_24156 [Oryza sativa Indica Group]
gi|125598231|gb|EAZ38011.1| hypothetical protein
OsJ_22356 [Oryza sativa Japonica Group]
gi|215693232|dbj|BAG88614.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 116
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = -3
Query: 197 ASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 18
A G SP V +LRK+LFRR+L+G +DGR+FLG FHC+DKQGNI+LQDAVEYR + R
Sbjct: 10 AETTGGGGSSPHVEKLRKMLFRRMLVGVNDGRYFLGLFHCVDKQGNILLQDAVEYRTSAR 69
Query: 17 SGDPS 3
PS
Sbjct: 70 RRSPS 74
>ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like [Solanum tuberosum]
Length = 118
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/70 (61%), Positives = 57/70 (81%)
Frame = -3
Query: 224 SFLQDVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQD 45
++L +V + S + ++ S V+ ++KLL+RR+L+G SDGRFFLGTF+CIDKQGNIILQD
Sbjct: 8 TYLSEVGS--SNQLETNNSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQD 65
Query: 44 AVEYRHTRRS 15
AVEYR TRRS
Sbjct: 66 AVEYRSTRRS 75
>gb|EOY27665.1| Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma
cacao]
Length = 140
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = -3
Query: 197 ASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 18
+S+ S + V ++RKLLFRR+L+G DGRFFLGTFHCIDKQGNIILQD++EYR TR
Sbjct: 42 SSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNIILQDSIEYRSTRH 101
Query: 17 S 15
S
Sbjct: 102 S 102
>gb|EOY27664.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 123
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = -3
Query: 197 ASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 18
+S+ S + V ++RKLLFRR+L+G DGRFFLGTFHCIDKQGNIILQD++EYR TR
Sbjct: 14 SSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNIILQDSIEYRSTRH 73
Query: 17 S 15
S
Sbjct: 74 S 74
>ref|XP_004137364.1| PREDICTED: uncharacterized protein LOC101206200 [Cucumis sativus]
gi|449523864|ref|XP_004168943.1| PREDICTED:
uncharacterized protein LOC101229488 [Cucumis sativus]
Length = 112
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/76 (61%), Positives = 53/76 (69%)
Frame = -3
Query: 242 ESFSNPSFLQDVSTRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQG 63
E S S +QD S S D + ++RKLLFRR+LIG DGRFFLG F+CIDKQG
Sbjct: 2 EQESGGSMVQDGSNVESNPESLDH---IGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQG 58
Query: 62 NIILQDAVEYRHTRRS 15
NIILQDAVEYR TRRS
Sbjct: 59 NIILQDAVEYRSTRRS 74
>ref|NP_680719.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] gi|332658634|gb|AEE84034.1| Small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
Length = 112
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = -3
Query: 197 ASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRR 18
AS GSD P +++LRKLLFR++L+G DGRFFLG FHCIDKQGNIILQD VEYR RR
Sbjct: 13 ASTSEGSDFDP-ISRLRKLLFRQMLVGIKDGRFFLGNFHCIDKQGNIILQDTVEYRSIRR 71
Query: 17 S 15
S
Sbjct: 72 S 72
>gb|EMT17253.1| hypothetical protein F775_28150 [Aegilops tauschii]
Length = 125
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = -3
Query: 206 STRASERSGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRH 27
S+ A + S S VA LRKLLFRR+L+G +DGR+FLG FHC+DKQGNIILQDAVEYR
Sbjct: 21 SSAAPMDATSSGSQHVATLRKLLFRRMLVGVNDGRYFLGLFHCVDKQGNIILQDAVEYRS 80
Query: 26 TRRS 15
RRS
Sbjct: 81 ARRS 84
>ref|XP_004486013.1| PREDICTED: uncharacterized protein LOC101510833 isoform X1 [Cicer
arietinum] gi|502078653|ref|XP_004486014.1| PREDICTED:
uncharacterized protein LOC101510833 isoform X2 [Cicer
arietinum]
Length = 111
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -3
Query: 185 SGSDESPAVAQLRKLLFRRILIGASDGRFFLGTFHCIDKQGNIILQDAVEYRHTRRS 15
S ES V+++RKLLFRR+L+G DGRFFLG+F+CIDKQGNIILQD VEYR TRRS
Sbjct: 16 SDCSESDRVSRVRKLLFRRMLVGIKDGRFFLGSFYCIDKQGNIILQDTVEYRSTRRS 72