BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00016150
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti...   215   6e-54
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ...   214   1e-53
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su...   214   1e-53
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   214   1e-53
ref|XP_002312337.1| DNA-directed RNA polymerase II family protei...   213   2e-53
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   212   5e-53
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe...   212   7e-53
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su...   211   9e-53
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S...   211   1e-52
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3...   210   3e-52
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus...   209   4e-52
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr...   209   4e-52
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, ...   209   4e-52
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela...   209   6e-52
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   209   6e-52
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]      207   1e-51
ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II su...   207   2e-51
ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su...   206   4e-51
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   206   4e-51
ref|XP_001782379.1| predicted protein [Physcomitrella patens] gi...   206   5e-51

>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|125537020|gb|EAY83508.1| hypothetical protein
           OsI_38722 [Oryza sativa Indica Group]
           gi|125579719|gb|EAZ20865.1| hypothetical protein
           OsJ_36504 [Oryza sativa Japonica Group]
          Length = 114

 Score =  215 bits (548), Expect = 6e-54
 Identities = 94/109 (86%), Positives = 103/109 (94%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR+QKILL+ACRNCDHQEVADNNCVYRNV+ H  GE TQ+LQDVA D
Sbjct: 6   FCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 66  PTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9B-like [Oryza brachyantha]
          Length = 114

 Score =  214 bits (545), Expect = 1e-53
 Identities = 93/109 (85%), Positives = 103/109 (94%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR+QKILL+ACRNCDHQEVADNNCVYRNV+ H  GE TQ+LQDVA D
Sbjct: 6   FCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 66  PTLPRTKSVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 114

 Score =  214 bits (545), Expect = 1e-53
 Identities = 93/109 (85%), Positives = 102/109 (93%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR+QK+LLFACRNCDHQEVADNNCVYRNV+ H  GE TQ+LQDVA D
Sbjct: 6   FCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK V+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 66  PTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  214 bits (545), Expect = 1e-53
 Identities = 94/109 (86%), Positives = 103/109 (94%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQKILL+ACRNCDHQEVA+NNCVYRN I H VGE+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 66  PTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002312337.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
           gi|222852157|gb|EEE89704.1| DNA-directed RNA polymerase
           II family protein [Populus trichocarpa]
          Length = 114

 Score =  213 bits (543), Expect = 2e-53
 Identities = 93/109 (85%), Positives = 102/109 (93%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYPREDR+QKILL+ACRNCDHQE+AD+NCVYRN + H V E+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV C VC HPEAVFFQATSRGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  212 bits (540), Expect = 5e-53
 Identities = 93/109 (85%), Positives = 103/109 (94%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR++KILL+ACRNCDHQEVADNNCVYRN I H VGE+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
          Length = 114

 Score =  212 bits (539), Expect = 7e-53
 Identities = 94/109 (86%), Positives = 103/109 (94%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+ED++QKILL+ACRNCDHQEVADNNCVYRN I H VGE+TQILQDVAAD
Sbjct: 6   FCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQILQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV+C+ C H EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWRD
Sbjct: 66  PTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 114


>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Fragaria vesca subsp. vesca]
          Length = 114

 Score =  211 bits (538), Expect = 9e-53
 Identities = 94/109 (86%), Positives = 102/109 (93%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+E++E KILL+ACRNCDHQEVADNNCVYRN I H VGE+TQILQDVAAD
Sbjct: 6   FCRECNNILYPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQILQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 66  PTLPRTKAVRCAQCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
           gi|241944049|gb|EES17194.1| hypothetical protein
           SORBIDRAFT_08g018130 [Sorghum bicolor]
          Length = 114

 Score =  211 bits (537), Expect = 1e-52
 Identities = 92/109 (84%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQK+LL+ACRNCDHQEVADNNCVYRNV+ H  GE TQ+LQDVA D
Sbjct: 6   FCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+CA CGH EAVFFQAT+RGEEGMTLFFVCCNPSCG RWR+
Sbjct: 66  PTLPRTKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114


>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
           RNA polymerase II 14.5 kDa polypeptide [Zea mays]
           gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
           polymerase subunit [Zea mays]
          Length = 114

 Score =  210 bits (534), Expect = 3e-52
 Identities = 91/109 (83%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQK+LL+ACRNCDHQEVADNNCVYRNV+ H  GE TQ+LQDVA D
Sbjct: 6   FCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+C+ CGH EAVFFQAT+RGEEGMTLFFVCCNPSCG RWR+
Sbjct: 66  PTLPRTKSVRCSSCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114


>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
          Length = 114

 Score =  209 bits (533), Expect = 4e-52
 Identities = 92/109 (84%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR+QKILL+ACRNCDHQEVADN CVYRN I H VGE+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+C  C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 66  PTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
           gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 9A-like [Citrus
           sinensis] gi|557521280|gb|ESR32647.1| hypothetical
           protein CICLE_v10006256mg [Citrus clementina]
          Length = 114

 Score =  209 bits (533), Expect = 4e-52
 Identities = 91/109 (83%), Positives = 102/109 (93%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+ED++QKILL+ACRNCDHQEVADNNCVYRN + H VGE+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVGERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV+C  C H EAVFFQATSRGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 66  PTLPRTKAVRCVKCQHGEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9A-like [Glycine max]
          Length = 114

 Score =  209 bits (533), Expect = 4e-52
 Identities = 92/109 (84%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQK+LLFACRNCDHQEVADN CVYRN I H VGE+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+C  C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
           gi|302811122|ref|XP_002987251.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300145148|gb|EFJ11827.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300156045|gb|EFJ22675.1| hypothetical protein
           SELMODRAFT_232741 [Selaginella moellendorffii]
          Length = 115

 Score =  209 bits (531), Expect = 6e-52
 Identities = 90/109 (82%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR+QKILL+ACRNCDHQEVADNNCVYRN + H  GE+TQ+LQDVA+D
Sbjct: 6   FCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQDVASD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+C  C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 66  PTLPRTKSVRCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGYRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  209 bits (531), Expect = 6e-52
 Identities = 91/109 (83%), Positives = 102/109 (93%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDR+QK+LLFACRNCDHQEVADN CVYRN I H VGE+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+C+ C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
          Length = 114

 Score =  207 bits (528), Expect = 1e-51
 Identities = 92/109 (84%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQKILL+ACRNCDHQEVA+NNCVYRN + H  GE+TQILQDVAAD
Sbjct: 6   FCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAGERTQILQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKSVICANCKHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Setaria italica]
          Length = 114

 Score =  207 bits (527), Expect = 2e-51
 Identities = 92/109 (84%), Positives = 99/109 (90%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQK+LL+ACRNCDHQEVADNNCVYRNV+ H  GE TQ+LQDVA D
Sbjct: 6   FCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK V+CAVCGH EAVFFQAT RGEEGMTLFFVCCN SCG RWR+
Sbjct: 66  PTLPRTKDVRCAVCGHGEAVFFQATVRGEEGMTLFFVCCNLSCGNRWRE 114


>ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Solanum lycopersicum] gi|565378585|ref|XP_006355736.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 9A-like [Solanum tuberosum]
          Length = 114

 Score =  206 bits (524), Expect = 4e-51
 Identities = 89/109 (81%), Positives = 101/109 (92%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+ED+EQKILL+ACRNCDHQE A+NNCVYRN I H   E+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK+V+C+ CGH EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  206 bits (524), Expect = 4e-51
 Identities = 91/109 (83%), Positives = 99/109 (90%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYP+EDREQKILL+ACRNCDHQE ADN CVYRN I H V E+TQ+LQDVAAD
Sbjct: 6   FCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVAAD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTKAV+C  C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 66  PTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_001782379.1| predicted protein [Physcomitrella patens]
           gi|162666171|gb|EDQ52833.1| predicted protein
           [Physcomitrella patens]
          Length = 114

 Score =  206 bits (523), Expect = 5e-51
 Identities = 88/109 (80%), Positives = 100/109 (91%)
 Frame = -1

Query: 527 FCRECNNILYPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAAD 348
           FCRECNNILYPREDR++K+LL+ACRNCDHQEVADNNCVYRN + H   E+TQ+LQD+A+D
Sbjct: 6   FCRECNNILYPREDRDKKVLLYACRNCDHQEVADNNCVYRNEVLHSADERTQVLQDIASD 65

Query: 347 PTLPRTKAVKCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 201
           PTLPRTK V+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 66  PTLPRTKNVRCANCQHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114