BLASTX nr result
ID: Zingiber25_contig00016002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00016002
(910 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi... 322 2e-85
gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily p... 313 4e-83
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ... 306 9e-81
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi... 305 2e-80
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi... 305 2e-80
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi... 303 4e-80
gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis] 302 1e-79
ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containi... 301 2e-79
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,... 301 2e-79
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi... 301 3e-79
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar... 298 2e-78
ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutr... 298 2e-78
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps... 298 2e-78
ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containi... 295 2e-77
gb|ESW11652.1| hypothetical protein PHAVU_008G048400g [Phaseolus... 292 1e-76
ref|XP_002325518.2| pentatricopeptide repeat-containing family p... 291 3e-76
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ... 286 7e-75
ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containi... 281 2e-73
gb|EPS73900.1| hypothetical protein M569_00856 [Genlisea aurea] 260 4e-67
gb|EOY17085.1| Pentatricopeptide repeat (PPR-like) superfamily p... 256 8e-66
>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 322 bits (824), Expect = 2e-85
Identities = 157/261 (60%), Positives = 201/261 (77%)
Frame = -3
Query: 785 VQSSRIPKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVN 606
++S + F E DAFP SLPLH+KNPHAI DIQR AR G+L +AL ILDY +GIPVN
Sbjct: 91 LKSPKKKPFSEKDAFPMSLPLHTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVN 150
Query: 605 ITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFS 426
TTF++LL AC K+L G+Q+HVH+R +GLE NEFL KLV MY +CGS +DAR +F
Sbjct: 151 PTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFD 210
Query: 425 ELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPS 246
+S ++ YTWNALL+GNV+ G + + +A LS +SEMRELGV+ N Y+FSC+IKSFAG+ +
Sbjct: 211 GVSSKSVYTWNALLRGNVISGRRHYREA-LSTYSEMRELGVELNVYSFSCMIKSFAGATA 269
Query: 245 FTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAG 66
F QG K H LLIKNG SS+L+TSLIDMYFKCGKI++A +F+EI ERD+V+WGA+IAG
Sbjct: 270 FRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAG 329
Query: 65 FAHKRLYRESIKYLKLMGSEG 3
F H RL RE+++YL+ M EG
Sbjct: 330 FGHNRLQREALEYLRWMRREG 350
Score = 101 bits (252), Expect = 3e-19
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Frame = -3
Query: 656 KALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHL-RTHGLEGNEFLLGKL 480
+AL L +++ GI N +L A GR+VH ++ +T F+ L
Sbjct: 338 EALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSAL 397
Query: 479 VQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVD 300
+ MY CG R++F + R A +W AL+ G V G D +L + M++ G
Sbjct: 398 IDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRL---DQALRSIAWMQQEGFR 454
Query: 299 TNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKV 120
+ T + ++ A + QG +IH +KNGF + + TSL+ MY KCG + + K+
Sbjct: 455 PDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 514
Query: 119 FDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLM 15
FD + R+++ W A+I + E++ + M
Sbjct: 515 FDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSM 549
Score = 96.3 bits (238), Expect = 1e-17
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Frame = -3
Query: 656 KALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLV 477
+AL+ ++ G+ +N+ +F+ ++ + + A G + H L +GL + L L+
Sbjct: 237 EALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLI 296
Query: 476 QMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDT 297
MY CG AR +F E+ R W A++ G G R +L MR G+
Sbjct: 297 DMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGF---GHNRLQREALEYLRWMRREGICP 353
Query: 296 NEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKV 120
N + ++ ++ G ++H ++K Y+ + +Q++LIDMY KCG + +V
Sbjct: 354 NSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQV 413
Query: 119 FDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
F TER+ V W A+++G+ ++++ + M EG
Sbjct: 414 FYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEG 452
Score = 93.6 bits (231), Expect = 9e-17
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +AL + ++Q G ++ T A +L C+ +AL G+++H + +G N +
Sbjct: 436 GRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIA 495
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG+ D + +LF + R +W A++ V G ++ +F M +L
Sbjct: 496 TSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLH---EAVGVFRSM-QL 551
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQ-GAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQM 132
+ I S G + G +IHG ++K F + + +I MY K G I
Sbjct: 552 SKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISK 611
Query: 131 AMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
A F I + + W A+I + + LY+++I M S+G
Sbjct: 612 AKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDG 654
>gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 683
Score = 313 bits (803), Expect = 4e-83
Identities = 155/255 (60%), Positives = 195/255 (76%)
Frame = -3
Query: 767 PKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAA 588
P F E +AFP SLPLH+KNPHAI KDIQR AR +L +ALAILDY+ +GIPVN TTF++
Sbjct: 55 PPFFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSS 114
Query: 587 LLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRT 408
LL+AC R K+LA GRQ+H H+RT+GLE NEFL KL MY +CGS DDA R+F E + +
Sbjct: 115 LLAACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKN 174
Query: 407 AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAK 228
++WNALL+G V+ G KR+ D LS +SEMR L V N YTFS ++KSFAG+ +F QG K
Sbjct: 175 VHSWNALLRGTVISGKKRYLDV-LSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLK 233
Query: 227 IHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRL 48
H LLIKNGF SS+L+T LID YFKCGKI++A +V +EI ERDIVLWGA+IAGFAH R+
Sbjct: 234 THALLIKNGFIDSSMLRTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRM 293
Query: 47 YRESIKYLKLMGSEG 3
+E++ Y++ M S G
Sbjct: 294 QKEALSYVRWMISAG 308
Score = 94.7 bits (234), Expect = 4e-17
Identities = 53/221 (23%), Positives = 108/221 (48%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L++AL + ++Q G ++ T A +L C+ +AL+ G+++H + + N ++
Sbjct: 394 GRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPNVSIV 453
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG D + +LF+ + R +W A+++ V G +LS+F M+
Sbjct: 454 TSLMIMYSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSGHLH---EALSVFRSMQFS 510
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ + ++ + + G +IHG ++K F + + ++ MY CG I A
Sbjct: 511 KHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDFESIPFVSAGIVKMYGSCGLISTA 570
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSE 6
VF+ + + + W A+I + + L ++I M S+
Sbjct: 571 KLVFEAVPVKGTMTWTAIIEAYGYNDLCEDAISLFHQMASD 611
Score = 79.7 bits (195), Expect = 1e-12
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Frame = -3
Query: 617 IPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDAR 438
+ +N+ TF+A+L + + A G + H L +G + L L+ Y CG A
Sbjct: 208 VKLNVYTFSAVLKSFAGASAFRQGLKTHALLIKNGFIDSSMLRTGLIDFYFKCGKIKLAC 267
Query: 437 RLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFA 258
R+ E+ R W A++ G R +LS M G+ N + ++
Sbjct: 268 RVLEEIPERDIVLWGAMIAGFA---HNRMQKEALSYVRWMISAGIYPNSVILTTILPVIG 324
Query: 257 GSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWG 81
+ G +IH ++K Y+ L +Q+ L+DMY KCG + +VF ER+ + W
Sbjct: 325 EVWARKLGREIHAYVVKTKSYSKQLVIQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWT 384
Query: 80 AVIAGFAHKRLYRESIKYLKLMGSEG 3
A+++G+ ++++ + M EG
Sbjct: 385 ALMSGYVSNGRLNQALRSVVWMQQEG 410
Score = 60.5 bits (145), Expect = 9e-07
Identities = 34/140 (24%), Positives = 67/140 (47%)
Frame = -3
Query: 689 IQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGL 510
I+ + G LH+AL++ +Q + A +L+ CS +A+ G+++H +
Sbjct: 488 IESYVKSGHLHEALSVFRSMQFSKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDF 547
Query: 509 EGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSL 330
E F+ +V+MY +CG A+ +F + + TW A+++ G + ++SL
Sbjct: 548 ESIPFVSAGIVKMYGSCGLISTAKLVFEAVPVKGTMTWTAIIE---AYGYNDLCEDAISL 604
Query: 329 FSEMRELGVDTNEYTFSCLI 270
F +M N +TF ++
Sbjct: 605 FHQMASDDFIPNHFTFKVVL 624
>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334679|gb|EFH65097.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 688
Score = 306 bits (783), Expect = 9e-81
Identities = 154/262 (58%), Positives = 191/262 (72%), Gaps = 1/262 (0%)
Frame = -3
Query: 788 SVQSSRIPK-FREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIP 612
S ++ PK FRE DAFP SLPLHSKNPH+I +DIQR AR L AL ILDYL+ RGIP
Sbjct: 48 STSPAKKPKPFRERDAFPSSLPLHSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIP 107
Query: 611 VNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRL 432
VN TTF+ALL+AC R K+L G+QVHVH+R +GLE NEF+ KLV MY CGS DA+++
Sbjct: 108 VNATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKV 167
Query: 431 FSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGS 252
F E + Y+WNALL+G V+ G KR+ D LS F+EMRELGVD N Y+FS + KSFAG+
Sbjct: 168 FDESTSSNVYSWNALLRGTVISGKKRYQDV-LSTFTEMRELGVDLNVYSFSNVFKSFAGA 226
Query: 251 PSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVI 72
+ QG K H L IKNG + S L+TSL+DMYFKCGK+ +A +VFDEI ERDIV+WGA+I
Sbjct: 227 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 286
Query: 71 AGFAHKRLYRESIKYLKLMGSE 6
AG AH + E++ + M SE
Sbjct: 287 AGLAHNKRQWEALGLFRSMISE 308
Score = 97.1 bits (240), Expect = 8e-18
Identities = 56/222 (25%), Positives = 105/222 (47%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+ +AL + ++Q G ++ T A +L C+ +A+ G+++H + + N L+
Sbjct: 396 GRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 455
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG P+ RLF L R W A++ V G R A + +F M
Sbjct: 456 TSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLR---AGIEVFRSMLLS 512
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T ++ + + G ++HG ++K F + + +I MY +CG ++ A
Sbjct: 513 KHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKMYGQCGDLRSA 572
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
FD + + + W A+I + + +R++IK + M S G
Sbjct: 573 NFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRG 614
Score = 89.4 bits (220), Expect = 2e-15
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Frame = -3
Query: 650 LAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQM 471
L+ ++ G+ +N+ +F+ + + + AL G + H +GL + FL LV M
Sbjct: 198 LSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 257
Query: 470 YATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM-RELGVDTN 294
Y CG ARR+F E+ R W A++ G + ++W +L LF M E G+ N
Sbjct: 258 YFKCGKVGLARRVFDEIVERDIVVWGAMIAG-LAHNKRQW--EALGLFRSMISEEGIYPN 314
Query: 293 EYTFSCLIKSFAGSPSFTQGAKIHGLLIK-NGFYTSSLLQTSLIDMYFKCGKIQMAMKVF 117
+ ++ + G ++H ++K + + + LID+Y KCG + +VF
Sbjct: 315 SVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVSGRRVF 374
Query: 116 DEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+R+ + W A+++G+A + ++++ + M EG
Sbjct: 375 YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 412
>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 305 bits (780), Expect = 2e-80
Identities = 143/255 (56%), Positives = 197/255 (77%)
Frame = -3
Query: 767 PKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAA 588
P F E DAFP SLPLH+KNPHAI +D+QR AR +L +AL I+DY+ +GIPVN TTF++
Sbjct: 60 PTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSS 119
Query: 587 LLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRT 408
L++AC R K++ + +Q+H H+R +GLE NEF+ +LV MY CGS ++A++LF E S ++
Sbjct: 120 LITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKS 179
Query: 407 AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAK 228
Y WNALL+G V+ G+R + LS ++EMR LGV+ N Y+F+ +IKSFAG+ +FTQG K
Sbjct: 180 VYPWNALLRGTVM-AGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLK 238
Query: 227 IHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRL 48
HGLLIKNG SSLL T+L+DMYFKCGKI++A ++F EITERD+V+WG++IAGFAH RL
Sbjct: 239 AHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRL 298
Query: 47 YRESIKYLKLMGSEG 3
RE+++Y + M +G
Sbjct: 299 QREALEYTRRMIDDG 313
Score = 94.4 bits (233), Expect = 5e-17
Identities = 54/222 (24%), Positives = 105/222 (47%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +A+ + ++Q G +I T A +L C++ +AL G+++H + + N ++
Sbjct: 399 GRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIV 458
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG D +LF+ + R W A++ + + ++ +F M+
Sbjct: 459 SSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYI---ENQCPHEAIDIFRAMQLS 515
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T S ++ + G +IHG ++K F + L+ +Y KCG ++MA
Sbjct: 516 KHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMA 575
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
VF+ I + + W A+I + ++E+I M S G
Sbjct: 576 KMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRG 617
Score = 89.4 bits (220), Expect = 2e-15
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ G+ +N+ +FA ++ + + A G + H L +GL G+ L LV MY CG
Sbjct: 208 MRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGK 267
Query: 452 PDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCL 273
AR++F E++ R W +++ G +R +L M + G+ N + +
Sbjct: 268 IKLARQMFGEITERDVVVWGSIIAGFAHNRLQR---EALEYTRRMIDDGIRPNSVILTTI 324
Query: 272 IKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITERD 96
+ + G ++H +IK Y+ + +Q++LIDMY KCG I VF ER+
Sbjct: 325 LPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERN 384
Query: 95 IVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ W A+++G+A ++++ + M EG
Sbjct: 385 AICWTALMSGYALNGRLEQAVRSVIWMQQEG 415
>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 305 bits (780), Expect = 2e-80
Identities = 143/255 (56%), Positives = 197/255 (77%)
Frame = -3
Query: 767 PKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAA 588
P F E DAFP SLPLH+KNPHAI +D+QR AR +L +AL I+DY+ +GIPVN TTF++
Sbjct: 60 PTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSS 119
Query: 587 LLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRT 408
L++AC R K++ + +Q+H H+R +GLE NEF+ +LV MY CGS ++A++LF E S ++
Sbjct: 120 LITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKS 179
Query: 407 AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAK 228
Y WNALL+G V+ G+R + LS ++EMR LGV+ N Y+F+ +IKSFAG+ +FTQG K
Sbjct: 180 VYPWNALLRGTVM-AGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLK 238
Query: 227 IHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRL 48
HGLLIKNG SSLL T+L+DMYFKCGKI++A ++F EITERD+V+WG++IAGFAH RL
Sbjct: 239 AHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRL 298
Query: 47 YRESIKYLKLMGSEG 3
RE+++Y + M +G
Sbjct: 299 QREALEYTRRMIDDG 313
Score = 94.4 bits (233), Expect = 5e-17
Identities = 54/222 (24%), Positives = 105/222 (47%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +A+ + ++Q G +I T A +L C++ +AL G+++H + + N ++
Sbjct: 399 GRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIV 458
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG D +LF+ + R W A++ + + ++ +F M+
Sbjct: 459 SSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYI---ENQCPHEAIDIFRAMQLS 515
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T S ++ + G +IHG ++K F + L+ +Y KCG ++MA
Sbjct: 516 KHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMA 575
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
VF+ I + + W A+I + ++E+I M S G
Sbjct: 576 KMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRG 617
Score = 89.4 bits (220), Expect = 2e-15
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ G+ +N+ +FA ++ + + A G + H L +GL G+ L LV MY CG
Sbjct: 208 MRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGK 267
Query: 452 PDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCL 273
AR++F E++ R W +++ G +R +L M + G+ N + +
Sbjct: 268 IKLARQMFGEITERDVVVWGSIIAGFAHNRLQR---EALEYTRRMIDDGIRPNSVILTTI 324
Query: 272 IKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITERD 96
+ + G ++H +IK Y+ + +Q++LIDMY KCG I VF ER+
Sbjct: 325 LPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERN 384
Query: 95 IVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ W A+++G+A ++++ + M EG
Sbjct: 385 AICWTALMSGYALNGRLEQAVRSVIWMQQEG 415
>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 303 bits (777), Expect = 4e-80
Identities = 154/283 (54%), Positives = 204/283 (72%), Gaps = 3/283 (1%)
Frame = -3
Query: 842 RSSIPPPFTFHSKPLSCFSVQSSRIPK---FREADAFPDSLPLHSKNPHAICKDIQRLAR 672
RS PP T H+KP + + R K F E DAFP SLPLH+KNP I KDI+R AR
Sbjct: 31 RSPPPPSKTHHTKPPRFTTPRKHRTKKPKPFTEKDAFPSSLPLHNKNPIFIFKDIKRFAR 90
Query: 671 LGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFL 492
+L +AL ILDY+ RGIPV+ TTF+++++AC R K+L GR+VH H+R +GLE N FL
Sbjct: 91 QNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFL 150
Query: 491 LGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRE 312
KLV MY CGS +DA++LF L + Y WNALL+G VV G +++ D L ++EMR
Sbjct: 151 RTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDV-LKTYTEMRA 209
Query: 311 LGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQM 132
LGV+ N Y+FS +IKSFAG+ +F+QG K HGLLIKNG + +L+TSLIDMYFKCGK+++
Sbjct: 210 LGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRL 269
Query: 131 AMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
A +VF+EI ERD+V+WGA++AGFAH RL RE ++Y++ M EG
Sbjct: 270 ACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEG 312
Score = 91.7 bits (226), Expect = 3e-16
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Frame = -3
Query: 719 SKNPHAICKD--IQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFG 546
SK + +C + A G+L +AL ++Q G ++ T A +L C++ +AL G
Sbjct: 379 SKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQG 438
Query: 545 RQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVR 366
+Q+H + H N + L+ MY+ CG + +RRLF + R +W A++ +
Sbjct: 439 KQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIEN 498
Query: 365 GGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSS 186
G + +L + M+ + ++ G +IHG ++K F +
Sbjct: 499 G---YLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVH 555
Query: 185 LLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLM 15
+ LI+MY G I A VF+ + + + W A+I + + LY++++ M
Sbjct: 556 FVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM 612
Score = 89.0 bits (219), Expect = 2e-15
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Frame = -3
Query: 620 GIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDA 441
G+ +N+ +F+ ++ + + +A + G + H L +GL N L L+ MY CG A
Sbjct: 211 GVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLA 270
Query: 440 RRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSF 261
R+F E+ R W A+L G +R L M E GV N + +I
Sbjct: 271 CRVFEEIPERDVVVWGAMLAGFAHNRLQR---EVLEYVRWMVEEGVKPNSVVMTIVIPVI 327
Query: 260 AGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITERDIVLW 84
+ G + H ++K Y+ + +Q+SLIDMY KCG + A +VF ER++V W
Sbjct: 328 GEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCW 387
Query: 83 GAVIAGFAHKRLYRESIKYLKLMGSEG 3
A+++G+A ++++ M EG
Sbjct: 388 TALMSGYAANGKLEQALRSTIWMQQEG 414
>gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]
Length = 647
Score = 302 bits (773), Expect = 1e-79
Identities = 149/255 (58%), Positives = 190/255 (74%)
Frame = -3
Query: 767 PKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAA 588
P F + DAFP+SLPLHSKNP A+ DIQR AR +L +AL ILDY+ +GIPVN TTFAA
Sbjct: 19 PVFTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAA 78
Query: 587 LLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRT 408
L++AC R K+L G+QVH +R +GL+ NEFL KLV MY +CGS DDA LF E R+
Sbjct: 79 LIAACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRS 138
Query: 407 AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAK 228
Y WNALL+GNV+ GG+R+ DA LS + +MR LG++ N Y+FS +IKS AG+ + QG K
Sbjct: 139 VYPWNALLRGNVISGGRRYRDA-LSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLK 197
Query: 227 IHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRL 48
H LLIKNG S++L+TSLIDMYFKCGKI++A +VF+EI ERDIV WGA+I+GFAH RL
Sbjct: 198 THALLIKNGLVGSAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRL 257
Query: 47 YRESIKYLKLMGSEG 3
+++ Y + M EG
Sbjct: 258 QWQALDYTRRMVDEG 272
Score = 95.9 bits (237), Expect = 2e-17
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Frame = -3
Query: 647 AILDYLQHR--GIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQ 474
A+ Y Q R GI +N+ +F++++ + + AL G + H L +GL G+ L L+
Sbjct: 160 ALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAMLRTSLID 219
Query: 473 MYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTN 294
MY CG AR++F E+ R W A++ G +W +L M + G+ N
Sbjct: 220 MYFKCGKIKLARQVFEEIVERDIVAWGAMISG-FAHNRLQW--QALDYTRRMVDEGIKLN 276
Query: 293 EYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTS-SLLQTSLIDMYFKCGKIQMAMKVF 117
+ ++ + G ++H +K Y + +Q+ LIDMY KCG ++ +VF
Sbjct: 277 SVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQSGLIDMYCKCGDMENGRRVF 336
Query: 116 DEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ ER+ + W A+I+G+ ++++ + M EG
Sbjct: 337 YRLKERNAICWTALISGYVANGRLEQALRSIIWMQQEG 374
Score = 92.0 bits (227), Expect = 3e-16
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 2/240 (0%)
Frame = -3
Query: 716 KNPHAICKD--IQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGR 543
K +AIC I G+L +AL + ++Q GI ++ T A ++ C+ +AL G+
Sbjct: 340 KERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGK 399
Query: 542 QVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRG 363
++H + + N ++ L+ MY+ CG D + RLF + R W A++ V
Sbjct: 400 EIHAYAVKNCFLPNVSIVSSLMMMYSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYV--- 456
Query: 362 GKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL 183
R D +LS+ M + ++ S G +IHG ++K F +
Sbjct: 457 ENRHLDEALSVIRSMVLSKHRPDSVAIGRMLCICNELKSLKFGKEIHGQVLKRNFESVHF 516
Query: 182 LQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ ++ MY +CG I A VFD I + + W A+I + LY ++I M +G
Sbjct: 517 VSAEIVKMYGRCGVIDDAKLVFDTIRVKGSMTWTAIIEAYRDNGLYEDAIDLFYEMRDKG 576
Score = 69.3 bits (168), Expect = 2e-09
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Frame = -3
Query: 662 LHKALAILDYL---QHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFL 492
L +AL+++ + +HR V I +L C+ K+L FG+++H + E F+
Sbjct: 461 LDEALSVIRSMVLSKHRPDSVAI---GRMLCICNELKSLKFGKEIHGQVLKRNFESVHFV 517
Query: 491 LGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRE 312
++V+MY CG DDA+ +F + + + TW A+++ R + DA + LF EMR+
Sbjct: 518 SAEIVKMYGRCGVIDDAKLVFDTIRVKGSMTWTAIIEA--YRDNGLYEDA-IDLFYEMRD 574
Query: 311 LGVDTNEYTFSCLIKSFAGSPSFTQGA-KIHGLLIKNGFYTSSLLQTSL-IDMYFKCGKI 138
G N +TF + S F A +I L+ ++ +S Q SL I + + G++
Sbjct: 575 KGFTPNNFTFQVAL-SICNEAGFVDDACRIFNLMTRSYNVKASEEQYSLIIGLLTRFGRV 633
Query: 137 QMAMK 123
+ A +
Sbjct: 634 EAAQR 638
>ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 683
Score = 301 bits (771), Expect = 2e-79
Identities = 151/296 (51%), Positives = 209/296 (70%)
Frame = -3
Query: 890 LHSVTVVYPKPKTIGNRSSIPPPFTFHSKPLSCFSVQSSRIPKFREADAFPDSLPLHSKN 711
+HS + P T N ++ P + L S + + P F E DAFP+SLPLH+KN
Sbjct: 15 IHSFPPNFHFPATATNYDNLNTPH-HRAFNLHALSRRHRKPPSFEERDAFPESLPLHTKN 73
Query: 710 PHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHV 531
P A+ KDIQR A +L++AL ILDYL +GIPVN TTF+ L++AC R ++L G+++H
Sbjct: 74 PRAVYKDIQRFAAQNKLNEALTILDYLDQQGIPVNATTFSHLITACVRTRSLDTGKKIHK 133
Query: 530 HLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRW 351
++ +GLE +EFL KLV MY + G+ DDA LF ++ + YTWNALL+G VV GGKR+
Sbjct: 134 YIWINGLESSEFLRQKLVNMYTSFGAVDDAHHLFDQMPGKNVYTWNALLRGTVVAGGKRY 193
Query: 350 GDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTS 171
D L +SEMRELGV+ N Y+FS +IKSFAG+ + +QG K H LL+KNG S +++TS
Sbjct: 194 RDV-LETYSEMRELGVEMNVYSFSNVIKSFAGASALSQGLKTHALLVKNGLIGSVIVRTS 252
Query: 170 LIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
L+DMYFKCGKI++A VF+E+ ERD+VLWGA+IAGFAH RL +E++++L++M EG
Sbjct: 253 LVDMYFKCGKIKLARLVFEEVGERDVVLWGAMIAGFAHNRLRKEALQHLRIMVEEG 308
Score = 90.9 bits (224), Expect = 6e-16
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ G+ +N+ +F+ ++ + + AL+ G + H L +GL G+ + LV MY CG
Sbjct: 203 MRELGVEMNVYSFSNVIKSFAGASALSQGLKTHALLVKNGLIGSVIVRTSLVDMYFKCGK 262
Query: 452 PDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCL 273
AR +F E+ R W A++ G R +L M E G+ N + +
Sbjct: 263 IKLARLVFEEVGERDVVLWGAMIAGFA---HNRLRKEALQHLRIMVEEGIMPNSVILTSV 319
Query: 272 IKSFAGSPSFTQGAKIHGLLIKNGFYT-SSLLQTSLIDMYFKCGKIQMAMKVFDEITERD 96
+ + G + H ++K Y + +Q++LIDMY KCG ++M +VF ER+
Sbjct: 320 LPVIGELSARKLGQEAHAYVVKTKSYLRQAFVQSALIDMYCKCGDMEMGRRVFYSSVERN 379
Query: 95 IVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ W A+++G+A ++++ + M EG
Sbjct: 380 AICWTALMSGYAANGRLEQALRSVIWMQQEG 410
Score = 89.0 bits (219), Expect = 2e-15
Identities = 56/221 (25%), Positives = 99/221 (44%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +AL + ++Q G ++ T A L C+ K L G+++H + + N ++
Sbjct: 394 GRLEQALRSVIWMQQEGFKPDVVTVATALPVCAELKDLKRGKEIHAYAVKNCFLPNVSIV 453
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG D + RLF + R TW A++ V G D +L + M
Sbjct: 454 SSLMVMYSKCGVLDYSIRLFDGMEQRNVITWTAMIDSLVENGCL---DGALGVIRSMLLS 510
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ S ++ G + G +IH ++K F + + L+ MY +C I A
Sbjct: 511 KHRPDSVAMSRMLAICGGLKNLKLGKEIHAQVLKKNFDSVPFVSAELVKMYGRCAAIDHA 570
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSE 6
FD I + + A+I + + +Y+E+I M S+
Sbjct: 571 KSFFDTIPVKGSMTRTAIIEAYGYAGMYQEAISLFDQMRSK 611
>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 456
Score = 301 bits (771), Expect = 2e-79
Identities = 149/260 (57%), Positives = 197/260 (75%), Gaps = 3/260 (1%)
Frame = -3
Query: 773 RIPKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTF 594
R +FRE DAFP SLPLH+KNP A+ KDIQR R +L +AL I+DYL+ +GIPVN TTF
Sbjct: 59 RKSRFREKDAFPSSLPLHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLEQQGIPVNATTF 118
Query: 593 AALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSP 414
+AL++AC R K+L +Q+H H+R +GLE NEFL KLV +Y +CGS +DA+ +F E +
Sbjct: 119 SALIAACIRSKSLDHAKQIHAHIRINGLENNEFLRTKLVSLYTSCGSFEDAKMVFGECTS 178
Query: 413 RTA-YTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQ 237
T+ Y WNALL+G V+ GGKR+ D +S + +MRELGV+ N Y+FS +IKSF+G+ +F Q
Sbjct: 179 STSVYPWNALLRGTVISGGKRYNDV-VSAYGQMRELGVELNVYSFSNVIKSFSGASAFKQ 237
Query: 236 GAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITER--DIVLWGAVIAGF 63
G K H LLIKNGF SS+L+T LID YFKCGKI++A +VF+E+ +R DIV+WGA+IAGF
Sbjct: 238 GLKTHALLIKNGFVDSSILRTCLIDFYFKCGKIKLAHRVFEEMPDRGIDIVVWGAMIAGF 297
Query: 62 AHKRLYRESIKYLKLMGSEG 3
AH R RE++ YL+ M SEG
Sbjct: 298 AHNRYQREALDYLRWMVSEG 317
Score = 80.1 bits (196), Expect = 1e-12
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ G+ +N+ +F+ ++ + S A G + H L +G + L L+ Y CG
Sbjct: 210 MRELGVELNVYSFSNVIKSFSGASAFKQGLKTHALLIKNGFVDSSILRTCLIDFYFKCGK 269
Query: 452 PDDARRLFSELSPR--TAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFS 279
A R+F E+ R W A++ G R+ +L M G+ N +
Sbjct: 270 IKLAHRVFEEMPDRGIDIVVWGAMIAGFA---HNRYQREALDYLRWMVSEGLYPNSVIVT 326
Query: 278 CLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITE 102
++ + + G ++HG ++K Y++ L +QT LIDMY KCG + +VF E
Sbjct: 327 TILPVIGEAWARKLGQEVHGYVVKTKRYSNQLTIQTGLIDMYCKCGDMVSGRRVFYGSME 386
Query: 101 RDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
R+ + W A+++G+ ++++ + M EG
Sbjct: 387 RNAISWTALMSGYVSNGRPEQALRSVAWMQQEG 419
>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Solanum lycopersicum]
Length = 674
Score = 301 bits (770), Expect = 3e-79
Identities = 150/290 (51%), Positives = 205/290 (70%), Gaps = 9/290 (3%)
Frame = -3
Query: 845 NRSSIPPPFTFHSKPLS---------CFSVQSSRIPKFREADAFPDSLPLHSKNPHAICK 693
+++++ PP +P S FS K+ + + + L +H+KNPHAI K
Sbjct: 11 SKTNLEPPRDTQDRPSSRANHHAHNLSFSRHIKEPSKYPKHNNLRNLLSVHTKNPHAIYK 70
Query: 692 DIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHG 513
DIQR A +L +AL ILDYL HRGIPVN TTFA+L++AC R K+L + VH H+ +G
Sbjct: 71 DIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAACVRLKSLTSAKIVHTHVIING 130
Query: 512 LEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLS 333
LE NEFL K+V MYA CGS +DA+++F ++ R+ Y WNALL+GNVV GG ++G+ L
Sbjct: 131 LENNEFLQTKVVNMYAACGSIEDAKKVFDKMPVRSVYPWNALLRGNVVLGGSKYGEV-LG 189
Query: 332 LFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYF 153
FS+MR LGV+ N Y+FSCLIKSFAG+ + QG K HGLLIKNGF S +++TSLIDMYF
Sbjct: 190 TFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSDIVRTSLIDMYF 249
Query: 152 KCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
KCGK+++A +VF+E+ ERD+V+WGA+IAGFAH + RE+++Y +LM EG
Sbjct: 250 KCGKVRLAHRVFEEVEERDVVMWGAIIAGFAHNKRQREALEYTRLMIREG 299
Score = 92.4 bits (228), Expect = 2e-16
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Frame = -3
Query: 620 GIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDA 441
G+ +N+ +F+ L+ + + AL G + H L +G G++ + L+ MY CG A
Sbjct: 198 GVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSDIVRTSLIDMYFKCGKVRLA 257
Query: 440 RRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSF 261
R+F E+ R W A++ G KR +A +RE G++ N + ++
Sbjct: 258 HRVFEEVEERDVVMWGAIIAG--FAHNKRQREALEYTRLMIRE-GLEVNSVILTTILPVI 314
Query: 260 AGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITERDIVLW 84
+ + G ++H +IK Y+ L +Q+ L+DMY KCG I KVF ER+ + W
Sbjct: 315 GEARASKLGKEVHAYVIKTKEYSKQLFIQSGLVDMYSKCGDIIAGRKVFYRSKERNAISW 374
Query: 83 GAVIAGFAHKRLYRESIKYLKLMGSEG 3
A+I+G+ ++++ + M EG
Sbjct: 375 TALISGYILNGRLEQALRSILWMQQEG 401
Score = 86.3 bits (212), Expect = 1e-14
Identities = 53/222 (23%), Positives = 99/222 (44%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +AL + ++Q G ++ T A +L C + K L +G+++H + +G N +
Sbjct: 385 GRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNTSVS 444
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG + R+F ++ R +W A++ + G + +L +F M+
Sbjct: 445 TCLMMMYSKCGLLQYSSRVFDSMAKRNVISWTAMMDSYIDSGCL---EEALGVFRSMQLS 501
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ ++ G +IHG ++K + + L+ MY CG I +
Sbjct: 502 KHRADSVAMGRILGVCGKLRLLKLGREIHGQILKKDIASVPFVSAELVKMYGSCGAIDKS 561
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
FD I + + W A+I + Y +I K M S+G
Sbjct: 562 RLSFDIIPIKGSMTWTAIIEAYGLSGQYGAAINEFKQMISKG 603
>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic; Flags: Precursor
gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
45757-47826 [Arabidopsis thaliana]
gi|332197082|gb|AEE35203.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 298 bits (763), Expect = 2e-78
Identities = 152/262 (58%), Positives = 187/262 (71%), Gaps = 1/262 (0%)
Frame = -3
Query: 788 SVQSSRIPK-FREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIP 612
S ++ PK FRE DAFP SLPLHSKNP+ I +DIQ AR L AL ILDYL+ RGIP
Sbjct: 49 STSPAKKPKPFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIP 108
Query: 611 VNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRL 432
VN TTF+ALL AC R K+L G+QVHVH+R +GLE NEFL KLV MY CGS DA+++
Sbjct: 109 VNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKV 168
Query: 431 FSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGS 252
F E + Y+WNALL+G V+ G KR+ D LS F+EMRELGVD N Y+ S + KSFAG+
Sbjct: 169 FDESTSSNVYSWNALLRGTVISGKKRYQDV-LSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 251 PSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVI 72
+ QG K H L IKNG + S L+TSL+DMYFKCGK+ +A +VFDEI ERDIV+WGA+I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 71 AGFAHKRLYRESIKYLKLMGSE 6
AG AH + E++ + M SE
Sbjct: 288 AGLAHNKRQWEALGLFRTMISE 309
Score = 92.4 bits (228), Expect = 2e-16
Identities = 56/222 (25%), Positives = 103/222 (46%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+ +AL + ++Q G ++ T A +L C+ +A+ G+++H + + N L+
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG P+ RLF L R W A++ V R A + +F M
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLR---AGIEVFRLMLLS 513
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T ++ + + G ++HG ++K F + + +I MY KCG ++ A
Sbjct: 514 KHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSA 573
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
FD + + + W A+I + L+R++I + M S G
Sbjct: 574 NFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG 615
Score = 85.1 bits (209), Expect = 3e-14
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Frame = -3
Query: 650 LAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQM 471
L+ ++ G+ +N+ + + + + + AL G + H +GL + FL LV M
Sbjct: 199 LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 258
Query: 470 YATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM-RELGVDTN 294
Y CG ARR+F E+ R W A++ G + ++W +L LF M E + N
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAG-LAHNKRQW--EALGLFRTMISEEKIYPN 315
Query: 293 EYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSS-LLQTSLIDMYFKCGKIQMAMKVF 117
+ ++ + G ++H ++K+ Y + + LID+Y KCG + +VF
Sbjct: 316 SVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF 375
Query: 116 DEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+R+ + W A+++G+A + ++++ + M EG
Sbjct: 376 YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
>ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
gi|557087203|gb|ESQ28055.1| hypothetical protein
EUTSA_v10019712mg [Eutrema salsugineum]
Length = 688
Score = 298 bits (762), Expect = 2e-78
Identities = 150/262 (57%), Positives = 191/262 (72%), Gaps = 1/262 (0%)
Frame = -3
Query: 788 SVQSSRIPK-FREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIP 612
S+ ++ PK FRE DAFP SLPLHSKNP+ I +DIQ AR +L AL ILDYL+ RGIP
Sbjct: 48 SISPAKNPKPFRERDAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIP 107
Query: 611 VNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRL 432
VN TTF+ALL+AC R K+L+ G+QVHVH+R +GLE NEFL KLV MY CGS DA+++
Sbjct: 108 VNATTFSALLAACVRRKSLSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKV 167
Query: 431 FSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGS 252
F E + Y+WNALL+G V+ G +R+ D LS F+EMRE G+D N Y+FS + KSFAG+
Sbjct: 168 FDESTSSNVYSWNALLRGTVISGKRRYQDV-LSTFAEMREQGIDLNVYSFSNVFKSFAGA 226
Query: 251 PSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVI 72
+ QG K H L IKNG +S L+TSL+DMYFKCGKI +A +VFDEI ERDIV+WGA+I
Sbjct: 227 SALRQGLKTHALAIKNGLLSSVFLKTSLVDMYFKCGKIGLARRVFDEIEERDIVVWGAMI 286
Query: 71 AGFAHKRLYRESIKYLKLMGSE 6
AG AH + E++ + M S+
Sbjct: 287 AGLAHNKRQWEALGLFRTMISQ 308
Score = 89.4 bits (220), Expect = 2e-15
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ +GI +N+ +F+ + + + AL G + H +GL + FL LV MY CG
Sbjct: 204 MREQGIDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLLSSVFLKTSLVDMYFKCGK 263
Query: 452 PDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM-RELGVDTNEYTFSC 276
ARR+F E+ R W A++ G + ++W +L LF M + G+ N +
Sbjct: 264 IGLARRVFDEIEERDIVVWGAMIAG-LAHNKRQW--EALGLFRTMISQEGIYPNSVILTT 320
Query: 275 LIKSFAGSPSFTQGAKIHGLLIKNGFYTSS-LLQTSLIDMYFKCGKIQMAMKVFDEITER 99
++ + G ++H ++K+ Y + + LID Y KCG + +VF +R
Sbjct: 321 ILPVLGDVKALKLGKEVHAHVLKSKNYLEQPFVHSGLIDFYCKCGDMVSGRRVFYGSKQR 380
Query: 98 DIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ + W A+++G+A + ++++ + M EG
Sbjct: 381 NAISWTALMSGYAANGRFDQALRSIVWMQQEG 412
Score = 89.0 bits (219), Expect = 2e-15
Identities = 55/222 (24%), Positives = 103/222 (46%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+ +AL + ++Q G ++ T A +L C+ +A+ G+++H + + N L+
Sbjct: 396 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAVKQGKEIHCYALKNLFLPNVSLV 455
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ +Y+ CG P+ RLF +L R W A++ V G R A + +F M
Sbjct: 456 TSLMVLYSKCGVPEYPVRLFDKLEHRNVKAWTAMIDCYVENGDLR---AGIKVFRSMLLS 512
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T ++ + + G +IHG ++K F + + +I MY CG ++ A
Sbjct: 513 KHRPDSVTMGRILTVCSELKALKLGKEIHGHILKKEFESIPFVSARIIKMYGGCGDLRSA 572
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
FD + + + W A+I + R++I + M S+G
Sbjct: 573 NFSFDAVVVKGSLTWTAIIEAYGCNGRLRDAINCFEQMISKG 614
>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
gi|482569787|gb|EOA33975.1| hypothetical protein
CARUB_v10021470mg [Capsella rubella]
Length = 688
Score = 298 bits (762), Expect = 2e-78
Identities = 152/262 (58%), Positives = 188/262 (71%), Gaps = 1/262 (0%)
Frame = -3
Query: 788 SVQSSRIPK-FREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIP 612
S +R PK FRE DAFP SLPLHSKNP +I +DIQ AR L AL ILDYL+ RGIP
Sbjct: 48 STSPARKPKPFRERDAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIP 107
Query: 611 VNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRL 432
VN TTF+ALL+AC R K+L G+QVHVH+R +GLE NEFL KLV MY CGS DA+++
Sbjct: 108 VNATTFSALLAACVRRKSLIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKV 167
Query: 431 FSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGS 252
F E + Y+WNALL+G V+ G KR+ D LS F+EMRE GVD N Y+ S + KSFAG+
Sbjct: 168 FDESTSSNVYSWNALLRGTVISGKKRYQDV-LSTFTEMREQGVDLNVYSLSNVFKSFAGA 226
Query: 251 PSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVI 72
+ QG K H L IKNG ++S L+TSL+DMYFKCGK+ +A +VFDEI ERDIV+WGA+I
Sbjct: 227 SALRQGLKTHALAIKNGLFSSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 286
Query: 71 AGFAHKRLYRESIKYLKLMGSE 6
AG AH + E++ + M SE
Sbjct: 287 AGLAHNKRQWEALGLFRTMISE 308
Score = 89.4 bits (220), Expect = 2e-15
Identities = 54/222 (24%), Positives = 102/222 (45%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+ +AL + ++Q G ++ T A +L C+ +A+ G+++H + + N L+
Sbjct: 396 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 455
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG P+ RLF L R W A++ V G R A +F M
Sbjct: 456 TSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVETGDLR---AGFEVFRSMLLS 512
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T ++ + + G ++HG ++K F + + +I MY +CG ++ A
Sbjct: 513 KHRPDSVTMGRVLTVCSELKALKLGKELHGHILKKEFESIPFVSARIIKMYGQCGDLRSA 572
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
FD + + + W A+I + ++++I + M S G
Sbjct: 573 NFSFDTVVVKGSLTWTAIIEAYGCNGRFKDAINCFEKMISRG 614
Score = 88.6 bits (218), Expect = 3e-15
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Frame = -3
Query: 650 LAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQM 471
L+ ++ +G+ +N+ + + + + + AL G + H +GL + FL LV M
Sbjct: 198 LSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFSSVFLKTSLVDM 257
Query: 470 YATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM-RELGVDTN 294
Y CG ARR+F E+ R W A++ G + ++W +L LF M E G+ N
Sbjct: 258 YFKCGKVGLARRVFDEIVERDIVVWGAMIAG-LAHNKRQW--EALGLFRTMISEEGIYPN 314
Query: 293 EYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSS-LLQTSLIDMYFKCGKIQMAMKVF 117
+ ++ + G ++H ++K Y + + LID+Y KCG + +VF
Sbjct: 315 SVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVHSGLIDLYCKCGDMVSGRRVF 374
Query: 116 DEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+R+ + W A+++G+A + ++++ + M EG
Sbjct: 375 YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 412
>ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Citrus sinensis]
Length = 681
Score = 295 bits (755), Expect = 2e-77
Identities = 148/254 (58%), Positives = 186/254 (73%)
Frame = -3
Query: 764 KFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAAL 585
K E DAFP SLPLH KNP AI KDIQR AR +L +AL ILDY+ +GIPVN+TTF AL
Sbjct: 54 KSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNAL 113
Query: 584 LSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTA 405
++AC R ++L GR +H H+R +GLE N FL KLV+MY +CGS +DA ++F E S +
Sbjct: 114 ITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESV 173
Query: 404 YTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKI 225
Y WNALL+G V+ G KR+ D L + +MRELGV N YTFSC+IKSFAG+ + QG K
Sbjct: 174 YPWNALLRGAVIAGKKRYRDV-LFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKT 232
Query: 224 HGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRLY 45
H LLIKNGF S+L+TSLIDMYFKCGKI++A +VFDE +RDIV+WG++IAGFAH RL
Sbjct: 233 HALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLR 292
Query: 44 RESIKYLKLMGSEG 3
E++ + M EG
Sbjct: 293 WEALDCARWMIREG 306
Score = 96.7 bits (239), Expect = 1e-17
Identities = 55/222 (24%), Positives = 106/222 (47%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +AL + ++Q G ++ T A ++ CS+ KAL G+++H + + N ++
Sbjct: 392 GRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSII 451
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L+ MY+ CG D + +LF E+ R +W A++ + G D +L +F M+
Sbjct: 452 TSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRL---DDALGVFRSMQLS 508
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ + ++ + G +IHG ++K F + + I MY CG ++ A
Sbjct: 509 KHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFESVPFVAAENIKMYGMCGFLECA 568
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
VFD + + + W A+I + + L +E++ M + G
Sbjct: 569 KLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFNKMRNGG 610
Score = 94.7 bits (234), Expect = 4e-17
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Frame = -3
Query: 644 ILDYLQHR--GIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQM 471
+ +Y++ R G+ +N+ TF+ ++ + + AL G + H L +G L L+ M
Sbjct: 195 LFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYSILRTSLIDM 254
Query: 470 YATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNE 291
Y CG ARR+F E R W +++ G RW +L M G+ N
Sbjct: 255 YFKCGKIKLARRVFDETDDRDIVVWGSMIAG-FAHNRLRW--EALDCARWMIREGIYPNS 311
Query: 290 YTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFD 114
+ L+ + + G ++H ++KN Y+ L +++SL+DMY KC + A +VF
Sbjct: 312 VVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFY 371
Query: 113 EITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
E ER+ +LW A+++G+ ++++ + M EG
Sbjct: 372 ETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEG 408
Score = 58.9 bits (141), Expect = 2e-06
Identities = 36/133 (27%), Positives = 64/133 (48%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L AL + +Q + A +LS + KAL G+++H + E F+
Sbjct: 493 GRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFESVPFVA 552
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
+ ++MY CG + A+ +F + + + TW A+++ G +LSLF++MR
Sbjct: 553 AENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAY---GYNDLCQEALSLFNKMRNG 609
Query: 308 GVDTNEYTFSCLI 270
G N +TF L+
Sbjct: 610 GFTPNHFTFKVLL 622
>gb|ESW11652.1| hypothetical protein PHAVU_008G048400g [Phaseolus vulgaris]
Length = 674
Score = 292 bits (748), Expect = 1e-76
Identities = 146/276 (52%), Positives = 200/276 (72%)
Frame = -3
Query: 830 PPPFTFHSKPLSCFSVQSSRIPKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKA 651
PP FT K ++ ++ F E DAFP SLPLH+KNP I KDI+R AR +L +A
Sbjct: 36 PPRFTTPRKQ------RTKKVKPFTEKDAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEA 89
Query: 650 LAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQM 471
L ILDY+ RGIPV+ TTF+A+++AC R K+L GR+VH+H+R +GLE N FL KLVQM
Sbjct: 90 LTILDYVDQRGIPVDSTTFSAVIAACIRTKSLPQGREVHIHIRINGLENNVFLRTKLVQM 149
Query: 470 YATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNE 291
Y +CGS ++A++LF L + Y WNALL+G VV G +++ D L ++EMR LGV N
Sbjct: 150 YTSCGSLEEAQKLFEGLPCESVYPWNALLRGTVVSGERQYIDV-LKTYAEMRALGVQLNV 208
Query: 290 YTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDE 111
Y+FS +IKSFAG+ +F++G K H LLIKNGF + +L+TSLIDMYFKCGK+++A VF+E
Sbjct: 209 YSFSNVIKSFAGASAFSEGLKTHALLIKNGFVDNYILRTSLIDMYFKCGKVRLACHVFEE 268
Query: 110 ITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
I ERD+V WGA++AGFAH ++ +E ++Y++ M EG
Sbjct: 269 IPERDVVAWGAMLAGFAHNKMQKEVLEYVRWMVKEG 304
Score = 92.4 bits (228), Expect = 2e-16
Identities = 54/220 (24%), Positives = 98/220 (44%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +AL ++Q G ++ T A +L C++ +AL GRQ+H + H N +
Sbjct: 390 GKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLPNVSIT 449
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
+L+ MY+ CG + +RRLF + R +W A++ + G +L + M+
Sbjct: 450 SQLMMMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSFINNGHL---CEALGVMRSMQLS 506
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ ++ G +IHG ++K F + LI+ Y G + A
Sbjct: 507 KYRPDSVAIGRMLSVCGELKLVKLGQEIHGQILKRDFARVPFVSAELINTYGSFGDVNKA 566
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGS 9
VF+ + +D + W A+I + + Y ++I M S
Sbjct: 567 KLVFNAVPVKDSITWTALIKAYGYNEFYHDAINLFDHMRS 606
Score = 82.0 bits (201), Expect = 3e-13
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Frame = -3
Query: 620 GIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDA 441
G+ +N+ +F+ ++ + + A + G + H L +G N L L+ MY CG A
Sbjct: 203 GVQLNVYSFSNVIKSFAGASAFSEGLKTHALLIKNGFVDNYILRTSLIDMYFKCGKVRLA 262
Query: 440 RRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSF 261
+F E+ R W A+L G + L M + G+ N + +
Sbjct: 263 CHVFEEIPERDVVAWGAMLAGFA---HNKMQKEVLEYVRWMVKEGMKPNSVVIAIAVPVI 319
Query: 260 AGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITERDIVLW 84
+ G + H ++K Y+ + +Q++LIDMY KCG + A +VF ER++V W
Sbjct: 320 GEVCARRLGQEFHAYVLKTKSYSKQVPIQSALIDMYCKCGDMISARRVFYGSKERNVVCW 379
Query: 83 GAVIAGFAHKRLYRESIKYLKLMGSEG 3
A++AG+A ++++ M EG
Sbjct: 380 TALMAGYAVNGKLEQALRSTIWMQQEG 406
>ref|XP_002325518.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317217|gb|EEE99899.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 678
Score = 291 bits (744), Expect = 3e-76
Identities = 145/255 (56%), Positives = 187/255 (73%), Gaps = 1/255 (0%)
Frame = -3
Query: 764 KFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAAL 585
+F E DAFP SLPLH KNP AI KDIQR +R QL AL I+DY+ +GIPVN TTF+AL
Sbjct: 50 QFDERDAFPASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSAL 109
Query: 584 LSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSE-LSPRT 408
++AC R K+L +++H HLR +GL+ NEFL KLV MY +CGS +DA+ +F E S T
Sbjct: 110 IAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTAT 169
Query: 407 AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAK 228
Y WNAL++G V+ G KR+GD LS + EMR GV+ NEYTFS +IKSFAG+ + QG K
Sbjct: 170 VYPWNALIRGTVISGKKRYGDV-LSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFK 228
Query: 227 IHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRL 48
H ++IKNG +S++L+T LIDMYFKCGK ++A VF+E+ ERDIV WGA+IAGFAH R
Sbjct: 229 THAIMIKNGMISSAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRR 288
Query: 47 YRESIKYLKLMGSEG 3
E++ Y++ M SEG
Sbjct: 289 QWEALDYVRWMVSEG 303
Score = 90.9 bits (224), Expect = 6e-16
Identities = 53/220 (24%), Positives = 105/220 (47%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G+L +AL + ++Q G ++ T A ++ C++ K L G+++H N L
Sbjct: 389 GRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLT 448
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
L++MY+ CG D + +LF + R W A++ V G + + ++F M+
Sbjct: 449 TSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCI---NEAFNVFRFMQWS 505
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
+ T + ++ + + G +IHG ++K F + + + L+ MY CG + A
Sbjct: 506 KHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSA 565
Query: 128 MKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGS 9
VF+ + + + W A+I + + L++++IK M S
Sbjct: 566 ESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRS 605
Score = 85.1 bits (209), Expect = 3e-14
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
Frame = -3
Query: 656 KALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVH-LRTHGLEGNEFLLGKL 480
+AL + ++ G+ N ++L A G++VH + L+ G + L
Sbjct: 291 EALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGL 350
Query: 479 VQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVD 300
+ MY CG RR+F R +W AL+ G V G + +L M++ G
Sbjct: 351 IDMYCKCGDMGSGRRVFYGSRERNVVSWTALMSGYVSNGRL---EQALRSVVWMQQEGCR 407
Query: 299 TNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKV 120
+ T + +I A + G +IH +K F + L TSLI MY KCG + ++K+
Sbjct: 408 PDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKL 467
Query: 119 FDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLM 15
FD + R+++ W A+I + E+ + M
Sbjct: 468 FDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFM 502
Score = 79.3 bits (194), Expect = 2e-12
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Frame = -3
Query: 650 LAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQM 471
L+ ++ G+ +N TF+ ++ + + AL G + H + +G+ + L L+ M
Sbjct: 192 LSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLIDM 251
Query: 470 YATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNE 291
Y CG A +F EL R W A++ G ++W +L M G+ N
Sbjct: 252 YFKCGKTRLAHNVFEELLERDIVAWGAMIAG-FAHNRRQW--EALDYVRWMVSEGMYPNS 308
Query: 290 YTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFD 114
+ ++ + G ++H ++K Y+ L +Q+ LIDMY KCG + +VF
Sbjct: 309 VIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRRVFY 368
Query: 113 EITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
ER++V W A+++G+ ++++ + M EG
Sbjct: 369 GSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEG 405
Score = 72.8 bits (177), Expect = 2e-10
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Frame = -3
Query: 812 HSKPLSCFSVQ----------SSRIPKFREADAFPDSLPL----HSKNPHAICKDIQRLA 675
H K + FSV+ +S I + + S+ L ++N A I
Sbjct: 428 HGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYV 487
Query: 674 RLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEF 495
G +++A + ++Q + T A +LS CS+ K L FG+++H H+ E F
Sbjct: 488 ENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPF 547
Query: 494 LLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMR 315
+ +LV+MY +CG A +F+ + + + TW A+++ W DA + LF EMR
Sbjct: 548 VSSELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIE--AYGYNSLWQDA-IKLFDEMR 604
Query: 314 ELGVDTNEYTFSCLI 270
N++TF ++
Sbjct: 605 SRKFTPNDFTFKVVL 619
>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505290|gb|AES86432.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 688
Score = 286 bits (732), Expect = 7e-75
Identities = 152/299 (50%), Positives = 206/299 (68%), Gaps = 12/299 (4%)
Frame = -3
Query: 863 KPKTIGNRSSIPPPFTFHSKPLSCFSVQSSRIPK-------FREADAFPDSLPLHSKNPH 705
KP I N T H + F++ + K F E DAFP SLPLH+KNP
Sbjct: 18 KPNKIFNFKPSSSFKTTHQRKKPKFTIPNKNNNKNNNVKKPFSEEDAFPCSLPLHNKNPI 77
Query: 704 AICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHL 525
+I KDI+ AR +L++ALAILDY+ GIPVN TTF++L++AC R +L+ G+Q+H H+
Sbjct: 78 SIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHI 137
Query: 524 RTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTA-YTWNALLKGNVVRGG--KR 354
R +GLE N FLL KLVQMY +CGS +DA +LF EL ++ Y WNALL+G VV GG K+
Sbjct: 138 RINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGTVVFGGRKKQ 197
Query: 353 WGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQT 174
+ D + +S+MRELGV+ N Y+FS +IKSFA +P+F QG K H LLIKNG S +L+T
Sbjct: 198 YIDV-VKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRT 256
Query: 173 SLIDMYFKCGKIQMAMKVFDEI--TERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
LID+YFKCGK+++A +VF+EI ERD+V+WG +++GF+H RL RE ++Y+K M EG
Sbjct: 257 CLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEG 315
Score = 95.1 bits (235), Expect = 3e-17
Identities = 57/224 (25%), Positives = 103/224 (45%)
Frame = -3
Query: 677 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 498
A +G+L +AL + ++Q G ++ T A +L C++ +AL G+Q+H + H N
Sbjct: 398 ASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNV 457
Query: 497 FLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM 318
L LV MY+ CG + + RLF ++ R +W A++ + G +L + M
Sbjct: 458 SLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLY---EALGVIRSM 514
Query: 317 RELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKI 138
+ + S ++ G +IHG ++K F + + LI+MY G +
Sbjct: 515 QLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVSAELINMYGALGDV 574
Query: 137 QMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSE 6
A VF + + + W A+I + + LY+ +I M S+
Sbjct: 575 DKANLVFSAVPVKGSMTWTALIRAYEYNELYQGAIDLFDQMRSD 618
Score = 84.0 bits (206), Expect = 7e-14
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ G+ +N+ +F++++ + + A G + H L +GL ++ L L+ +Y CG
Sbjct: 208 MRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGK 267
Query: 452 PDDARRLFSELSPRT--AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFS 279
ARR+F E+ R W +L G R L M E G+ N +
Sbjct: 268 VKLARRVFEEIPERERDVVVWGTMLSGF---SHNRLQREVLEYVKWMVEEGIYPNSVIMT 324
Query: 278 CLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITE 102
++ G ++H ++K Y + +Q++LIDMY KCG + A VF E
Sbjct: 325 IVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPE 384
Query: 101 RDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
R++V W A+++G+A ++++ + M EG
Sbjct: 385 RNVVCWTALMSGYASVGRLEQALRAVIWMQQEG 417
Score = 60.8 bits (146), Expect = 7e-07
Identities = 39/182 (21%), Positives = 77/182 (42%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G L++AL ++ +Q + + +LS C K L G+++H + F+
Sbjct: 502 GHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVS 561
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
+L+ MY G D A +FS + + + TW AL++ ++ LF +MR
Sbjct: 562 AELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRAYEYN---ELYQGAIDLFDQMRSD 618
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
N +TF ++ + +KI L+ K S ++ + + G+++ A
Sbjct: 619 RFSPNPFTFEVILSVCERAGFVNDASKIFNLMPKYKIEASKEHFAIMVRLLTRYGQLEKA 678
Query: 128 MK 123
+
Sbjct: 679 QR 680
>ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cicer arietinum]
Length = 694
Score = 281 bits (720), Expect = 2e-73
Identities = 153/291 (52%), Positives = 201/291 (69%), Gaps = 13/291 (4%)
Frame = -3
Query: 836 SIPPPFTF--HSKPLSCFSVQSSRIPK-----FREADAFPDSLPLHSKNPHAICKDIQRL 678
S PP T H K F+ +++ F E DAFP SLPLH+KNP I KDI+
Sbjct: 32 SSPPSITTTTHKKKSPKFTTTTNKNKNISEKPFLEEDAFPCSLPLHNKNPLFIYKDIKNF 91
Query: 677 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 498
AR +L +AL ILDY+ +GIPVN TTF++L++AC R +L+ GRQVH H+R +GL+ N
Sbjct: 92 ARQNKLKEALTILDYVDQQGIPVNATTFSSLIAACIRTNSLSIGRQVHTHIRINGLQNNL 151
Query: 497 FLLGKLVQMYATCGSPDDARRLFSE--LSPRTAYTWNALLKGNVVRGGKR--WGDASLSL 330
FL KLVQMY +CGS +DA +LF E S + Y WNALL+G+VV GGKR + D L
Sbjct: 152 FLKTKLVQMYTSCGSFEDAVKLFDESFQSESSVYPWNALLRGSVVSGGKRKQYIDV-LKT 210
Query: 329 FSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFK 150
+S+MRELGV+ N Y+FS +IKSFA +P+ QG K H LL+KNG S +L+T LIDMYFK
Sbjct: 211 YSKMRELGVELNVYSFSSVIKSFAAAPALFQGLKTHALLVKNGLLDSDILRTCLIDMYFK 270
Query: 149 CGKIQMAMKVFDEI--TERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
CGK+++A VF+EI ERD+V+WGA++AGF+H RL RE ++Y+K M EG
Sbjct: 271 CGKVKLARCVFEEIPERERDVVVWGAMLAGFSHNRLQREVLEYVKWMVEEG 321
Score = 91.7 bits (226), Expect = 3e-16
Identities = 55/225 (24%), Positives = 101/225 (44%)
Frame = -3
Query: 677 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 498
A +G+L +AL + ++Q G ++ T A +L C++ +AL G+Q+H + H N
Sbjct: 404 ASVGRLEQALRSIIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNV 463
Query: 497 FLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM 318
+ L+ MY+ CG + + LF + R +W A++ + G + +L + M
Sbjct: 464 SVTSSLMVMYSKCGVVEYSATLFDDTEQRNVISWTAMIDSYIENG---YLYEALGVIRSM 520
Query: 317 RELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKI 138
+ + + ++ + G +IHG +K F + + LIDMY G +
Sbjct: 521 QLSKHRPDSIAIARMLSVCSQLKLLKLGKEIHGQTLKRDFALVHFVSSELIDMYGTFGDV 580
Query: 137 QMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
A VF + + + W A+I + H Y+ +I M S G
Sbjct: 581 DKAKLVFSAVPVKGSMTWTALIRAYGHNEFYQGAIDLFHQMRSNG 625
Score = 87.0 bits (214), Expect = 9e-15
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Frame = -3
Query: 632 LQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGS 453
++ G+ +N+ +F++++ + + AL G + H L +GL ++ L L+ MY CG
Sbjct: 214 MRELGVELNVYSFSSVIKSFAAAPALFQGLKTHALLVKNGLLDSDILRTCLIDMYFKCGK 273
Query: 452 PDDARRLFSELSPRT--AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFS 279
AR +F E+ R W A+L G R L M E G+ N +
Sbjct: 274 VKLARCVFEEIPERERDVVVWGAMLAGF---SHNRLQREVLEYVKWMVEEGIYPNSVIMT 330
Query: 278 CLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSL-LQTSLIDMYFKCGKIQMAMKVFDEITE 102
+I + G ++H ++K Y+ + +Q++LIDMY KCG + A +VF +E
Sbjct: 331 IVIPVIGELCARRLGQEVHAFVVKTKSYSKLVPVQSALIDMYCKCGDLGSARRVFYSSSE 390
Query: 101 RDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
R++V W A+++G+A ++++ + M EG
Sbjct: 391 RNVVCWTALMSGYASVGRLEQALRSIIWMQQEG 423
Score = 70.5 bits (171), Expect = 8e-10
Identities = 44/182 (24%), Positives = 83/182 (45%)
Frame = -3
Query: 668 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 489
G L++AL ++ +Q + A +LS CS+ K L G+++H F+
Sbjct: 508 GYLYEALGVIRSMQLSKHRPDSIAIARMLSVCSQLKLLKLGKEIHGQTLKRDFALVHFVS 567
Query: 488 GKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMREL 309
+L+ MY T G D A+ +FS + + + TW AL++ G + ++ LF +MR
Sbjct: 568 SELIDMYGTFGDVDKAKLVFSAVPVKGSMTWTALIRAY---GHNEFYQGAIDLFHQMRSN 624
Query: 308 GVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMA 129
G N +TF ++ + +KI L+ K S ++ + + G+++ A
Sbjct: 625 GFSPNHFTFEAILSICDRAGFVNDASKIFNLMPKYKIEASKEHFAIMVRLLTRFGQLEKA 684
Query: 128 MK 123
+
Sbjct: 685 QR 686
>gb|EPS73900.1| hypothetical protein M569_00856 [Genlisea aurea]
Length = 680
Score = 260 bits (665), Expect = 4e-67
Identities = 122/249 (48%), Positives = 177/249 (71%), Gaps = 2/249 (0%)
Frame = -3
Query: 743 FPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRH 564
F ++ +H KNPH I ++IQR A L KA +LDYL+ +PVN+TTF +L+SAC R
Sbjct: 55 FSSAMSIHKKNPHIIYREIQRFASQNNLRKAFILLDYLERNAVPVNVTTFVSLISACIRL 114
Query: 563 KALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALL 384
K++ +QVH H+ +GL NEFL +LV +YA CGS +DA+ +F + ++ Y WNALL
Sbjct: 115 KSVDAAKQVHSHIAKNGLSKNEFLCTRLVHLYACCGSVEDAKGVFESMPAKSVYPWNALL 174
Query: 383 KGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKN 204
+G V+ G + S S F EM+ V+++ Y+FSCLIKS AG+ S QG+KIHG+LIKN
Sbjct: 175 RGKVMMGRYDQSEIS-SSFLEMQSSSVESDAYSFSCLIKSLAGNRSLRQGSKIHGILIKN 233
Query: 203 GFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEI--TERDIVLWGAVIAGFAHKRLYRESIK 30
GFY+S +L+T L+DMYFKCGK++ A +F+E+ ++D+V+WGA++AGFAH +L RE+++
Sbjct: 234 GFYSSPMLKTGLMDMYFKCGKVKPARSIFEEVEAEKKDVVIWGAMVAGFAHNKLQREALR 293
Query: 29 YLKLMGSEG 3
Y KLM +G
Sbjct: 294 YTKLMIDDG 302
Score = 86.3 bits (212), Expect = 1e-14
Identities = 60/225 (26%), Positives = 102/225 (45%)
Frame = -3
Query: 677 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 498
A G +AL + ++Q G + T A + CS +AL GR++H + +G +
Sbjct: 385 ASSGSFEQALRSIIWMQRDGFRPDTVTVATAIPVCSELRALNPGREIHAYALRNGCLPSV 444
Query: 497 FLLGKLVQMYATCGSPDDARRLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEM 318
+ L+ MY+ CG D + RLF ++ + W A+++ ++ RG DA + M
Sbjct: 445 SISTSLMVMYSRCGKWDCSSRLFGKMERKNVIAWTAMIECSIERGFLY--DALDVFRAMM 502
Query: 317 RELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCGKI 138
R G + S + S G +IHG +++ G S L+ MY CG+I
Sbjct: 503 RPSGCRPDSVALSRALHVCGELRSVELGKEIHGRVLRRG--GSEDESPELVRMYGACGRI 560
Query: 137 QMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIKYLKLMGSEG 3
+ A +VF+ I + + W A I + H + E++ M S G
Sbjct: 561 EDAKRVFESIAVKGSMSWTAAIEAYGHAKRPDEALLAFDRMLSSG 605
Score = 77.4 bits (189), Expect = 7e-12
Identities = 58/249 (23%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Frame = -3
Query: 737 DSLPLHSKNP-HAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHK 561
+S+P S P +A+ + + R Q + + L+ +Q + + +F+ L+ + + ++
Sbjct: 160 ESMPAKSVYPWNALLRGKVMMGRYDQSEISSSFLE-MQSSSVESDAYSFSCLIKSLAGNR 218
Query: 560 ALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSP--RTAYTWNAL 387
+L G ++H L +G + L L+ MY CG AR +F E+ + W A+
Sbjct: 219 SLRQGSKIHGILIKNGFYSSPMLKTGLMDMYFKCGKVKPARSIFEEVEAEKKDVVIWGAM 278
Query: 386 LKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAKIHGLLIK 207
+ G +R +L M + G++ N + ++ + G ++H LIK
Sbjct: 279 VAGFAHNKLQR---EALRYTKLMIDDGIEVNSVILTTILPVAGEILARKTGQELHAYLIK 335
Query: 206 N-GFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRLYRESIK 30
G+ + ++LIDMY K G + A K F + R+ V W A+++G+A + ++++
Sbjct: 336 RRGYSKEPFVNSALIDMYCKSGDMASARKAFFACSARNAVSWTALLSGYASSGSFEQALR 395
Query: 29 YLKLMGSEG 3
+ M +G
Sbjct: 396 SIIWMQRDG 404
>gb|EOY17085.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
[Theobroma cacao]
Length = 431
Score = 256 bits (654), Expect = 8e-66
Identities = 138/255 (54%), Positives = 173/255 (67%)
Frame = -3
Query: 767 PKFREADAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAA 588
P F E AFP LPLH+KNPHAI KDIQR AR +L +ALAILDY+ +GIPVN TTF++
Sbjct: 55 PPFFEKYAFPSPLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVNQQGIPVNPTTFSS 114
Query: 587 LLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRT 408
LL+AC R K+LA G+Q+HVH+RT+GL+ NEFL RT
Sbjct: 115 LLAACVRSKSLADGKQIHVHIRTNGLKNNEFL--------------------------RT 148
Query: 407 AYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFAGSPSFTQGAK 228
+ + G V+ G KR+ D LS +SEMR L V N YTFS ++KSFAG+ +F QG K
Sbjct: 149 KHAYI----GTVISGKKRYLDV-LSTYSEMRLLAVKLNVYTFSTVLKSFAGASAFRQGLK 203
Query: 227 IHGLLIKNGFYTSSLLQTSLIDMYFKCGKIQMAMKVFDEITERDIVLWGAVIAGFAHKRL 48
H LLIKNGF SS+L T LID YFKCGKI++A +VF+EI ERDIVLWGA+IAGFAH R+
Sbjct: 204 THALLIKNGFINSSMLMTGLIDFYFKCGKIKLACRVFEEIPERDIVLWGAMIAGFAHNRI 263
Query: 47 YRESIKYLKLMGSEG 3
+E++ Y++ M S G
Sbjct: 264 QKEALSYVRWMISAG 278
Score = 58.9 bits (141), Expect = 2e-06
Identities = 39/158 (24%), Positives = 70/158 (44%)
Frame = -3
Query: 617 IPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDAR 438
+ +N+ TF+ +L + + A G + H L +G + L+ L+ Y CG A
Sbjct: 178 VKLNVYTFSTVLKSFAGASAFRQGLKTHALLIKNGFINSSMLMTGLIDFYFKCGKIKLAC 237
Query: 437 RLFSELSPRTAYTWNALLKGNVVRGGKRWGDASLSLFSEMRELGVDTNEYTFSCLIKSFA 258
R+F E+ R W A++ G R +LS M G+ N + ++
Sbjct: 238 RVFEEIPERDIVLWGAMIAG---FAHNRIQKEALSYVRWMISAGIYPNSVIITTILPVIG 294
Query: 257 GSPSFTQGAKIHGLLIKNGFYTSSLLQTSLIDMYFKCG 144
+ G ++H ++K+ ++Q+ L+DMY KCG
Sbjct: 295 EVWARKPGWEVHAYVVKS---KQLVIQSGLVDMYCKCG 329