BLASTX nr result

ID: Zingiber25_contig00015988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00015988
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239723.1| PREDICTED: protein YIPF5-like [Solanum lycop...    60   3e-07
tpg|DAA44834.1| TPA: hypothetical protein ZEAMMB73_716633 [Zea m...    58   1e-06
ref|XP_004984847.1| PREDICTED: protein YIPF5-like isoform X1 [Se...    57   3e-06
ref|XP_003558161.1| PREDICTED: protein YIPF5-like [Brachypodium ...    57   3e-06
ref|XP_006649905.1| PREDICTED: protein YIPF5-like [Oryza brachya...    56   4e-06
ref|NP_001148647.1| protein YIP1 [Zea mays] gi|195621088|gb|ACG3...    56   6e-06
gb|EEC75017.1| hypothetical protein OsI_11097 [Oryza sativa Indi...    55   7e-06
ref|NP_001049791.1| Os03g0289200 [Oryza sativa Japonica Group] g...    55   7e-06

>ref|XP_004239723.1| PREDICTED: protein YIPF5-like [Solanum lycopersicum]
          Length = 251

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/96 (41%), Positives = 49/96 (51%)
 Frame = +2

Query: 71  MAKEFPVPQVVFPSSDGNLNVRPRIHQSSPAFKPPRPDIPAPSNPNIPFVSFDVXXXXXX 250
           MAK+F VP V+FPS DGN +V+ R   ++P   P +P  P  SNP IPF+SFD+      
Sbjct: 1   MAKQFNVPPVIFPS-DGNPSVQQRRPPANPPTAPFQP--PRSSNPGIPFMSFDI--GSAA 55

Query: 251 XXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                   EDEPPLLEELGI
Sbjct: 56  ASTSFSTPQFASATIGGGGGSIGFEDEPPLLEELGI 91


>tpg|DAA44834.1| TPA: hypothetical protein ZEAMMB73_716633 [Zea mays]
           gi|414866278|tpg|DAA44835.1| TPA: hypothetical protein
           ZEAMMB73_716633 [Zea mays]
          Length = 258

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/99 (42%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +2

Query: 71  MAKEFPVPQVVF-PSSDGNLNVRPRIHQSS--PAFKPPRPDIPAPSNPNIPFVSFDVXXX 241
           MAKEFPVP VVF PS+  +    P+   +S  PAF PPRP   + +NP +PF+SFDV   
Sbjct: 1   MAKEFPVPPVVFTPSTPTHRRYPPQGVGASPPPAFAPPRPSTSSAANP-LPFMSFDV--- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                      EDEPPLLEELGI
Sbjct: 57  SAAAASSSSAPPLFAGPIGVAGSGSSFEDEPPLLEELGI 95


>ref|XP_004984847.1| PREDICTED: protein YIPF5-like isoform X1 [Setaria italica]
           gi|514820318|ref|XP_004984848.1| PREDICTED: protein
           YIPF5-like isoform X2 [Setaria italica]
          Length = 258

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/99 (40%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
 Frame = +2

Query: 71  MAKEFPVPQVVFPSSDGNLNVRPRIHQSS---PAFKPPRPDIPAPSNPNIPFVSFDVXXX 241
           MAKEFPVP VVF  S       P     +   PAF PPRP   + +NP +PF+SFDV   
Sbjct: 1   MAKEFPVPPVVFTPSTPTHRRHPAPGMGASPPPAFAPPRPSTSSAANP-LPFMSFDV--- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                      EDEPPLLEELGI
Sbjct: 57  SAAAASSSSAPPLFAGPMGVGGSGASFEDEPPLLEELGI 95


>ref|XP_003558161.1| PREDICTED: protein YIPF5-like [Brachypodium distachyon]
          Length = 254

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/98 (40%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = +2

Query: 71  MAKEFPVPQVVF-PSSDGNL-NVRPRIHQSSPAFKPPRPDIPAPSNPNIPFVSFDVXXXX 244
           MAK+FPVP VVF PS+  +  +  P    S PAF PPRP   + +NP +PF+SFD+    
Sbjct: 1   MAKDFPVPPVVFNPSTPTHRRHPIPGTGASPPAFAPPRPSTSSAANP-LPFMSFDI---- 55

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                     EDEPPLLEELGI
Sbjct: 56  --GPAPSSSSPPLFTGPIGMGNGASFEDEPPLLEELGI 91


>ref|XP_006649905.1| PREDICTED: protein YIPF5-like [Oryza brachyantha]
          Length = 256

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/99 (42%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
 Frame = +2

Query: 71  MAKEFPVPQVVF-PSSDGNLNVRPRIHQSS--PAFKPPRPDIPAPSNPNIPFVSFDVXXX 241
           MAKEFPVP VVF PS+  +    P    +S  PAF PPRP   + +NP +PF+SFDV   
Sbjct: 1   MAKEFPVPPVVFTPSTPTHRRHPPPGTGASPPPAFAPPRPSTSSGANP-LPFMSFDV--- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                      EDEPPLLEELGI
Sbjct: 57  --NSAATSSSPPLFAGPIGVGASGASFEDEPPLLEELGI 93


>ref|NP_001148647.1| protein YIP1 [Zea mays] gi|195621088|gb|ACG32374.1| protein YIP1
           [Zea mays] gi|413956062|gb|AFW88711.1| protein YIP1 [Zea
           mays]
          Length = 258

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/99 (40%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
 Frame = +2

Query: 71  MAKEFPVPQVVFPSSDGNLNVRPRIHQS---SPAFKPPRPDIPAPSNPNIPFVSFDVXXX 241
           MAKEFPVP VVF  S       P         PAF PPRP   + +NP +PF+SFDV   
Sbjct: 1   MAKEFPVPPVVFTPSTPTHRRHPPPGMGVSPPPAFAPPRPSTSSAANP-LPFMSFDV--- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                      EDEPPLLEELGI
Sbjct: 57  SAAAASSSSAPPLFAGPIGVGGSGASFEDEPPLLEELGI 95


>gb|EEC75017.1| hypothetical protein OsI_11097 [Oryza sativa Indica Group]
          Length = 226

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/99 (42%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +2

Query: 71  MAKEFPVPQVVF-PSSDGNLNVRPRIHQSS--PAFKPPRPDIPAPSNPNIPFVSFDVXXX 241
           MAKEFPVP VVF PS+  +    P     S  PAF PPRP   + +NP +PF+SFDV   
Sbjct: 1   MAKEFPVPPVVFTPSTPTHRRHPPPGTGPSPPPAFAPPRPSTSSGANP-LPFMSFDV--- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                      EDEPPLLEELGI
Sbjct: 57  --GNAATSSSPPLFAGPIGVGGSGASFEDEPPLLEELGI 93


>ref|NP_001049791.1| Os03g0289200 [Oryza sativa Japonica Group]
           gi|108707592|gb|ABF95387.1| Yip1 domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548262|dbj|BAF11705.1| Os03g0289200 [Oryza sativa
           Japonica Group] gi|125585880|gb|EAZ26544.1| hypothetical
           protein OsJ_10439 [Oryza sativa Japonica Group]
          Length = 256

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/99 (42%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +2

Query: 71  MAKEFPVPQVVF-PSSDGNLNVRPRIHQSS--PAFKPPRPDIPAPSNPNIPFVSFDVXXX 241
           MAKEFPVP VVF PS+  +    P     S  PAF PPRP   + +NP +PF+SFDV   
Sbjct: 1   MAKEFPVPPVVFTPSTPTHRRHPPPGTGPSPPPAFAPPRPSTSSGANP-LPFMSFDV--- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDEPPLLEELGI 358
                                      EDEPPLLEELGI
Sbjct: 57  --GNAATSSSPPLFAGPIGVGGSGASFEDEPPLLEELGI 93


Top