BLASTX nr result
ID: Zingiber25_contig00015360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00015360
(740 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citr... 93 1e-16
gb|EXB93237.1| GDP-mannose 3,5-epimerase 1 [Morus notabilis] 85 3e-14
gb|EOY11072.1| Mediator of RNA polymerase II transcription subun... 76 1e-11
ref|XP_006838871.1| hypothetical protein AMTR_s00002p00266990 [A... 70 1e-09
gb|ESW19166.1| hypothetical protein PHAVU_006G101900g [Phaseolus... 69 1e-09
ref|XP_006604844.1| PREDICTED: mediator of RNA polymerase II tra... 68 3e-09
ref|XP_004302054.1| PREDICTED: mediator of RNA polymerase II tra... 65 2e-08
ref|XP_006577285.1| PREDICTED: mediator of RNA polymerase II tra... 64 7e-08
ref|XP_004494701.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-07
ref|XP_004494700.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-07
>ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citrus clementina]
gi|568835227|ref|XP_006471680.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 14-like [Citrus
sinensis] gi|557535047|gb|ESR46165.1| hypothetical
protein CICLE_v10000014mg [Citrus clementina]
Length = 1820
Score = 92.8 bits (229), Expect = 1e-16
Identities = 83/259 (32%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Frame = +1
Query: 7 TSFSSVVDEVFEFDKPLPSTNQLALSHKSPLSNTINANSY-------HGISANVSSPNLE 165
+SFSSVVDEVFEF+K P+ + L + S T +A+ + HG+ A SP E
Sbjct: 654 SSFSSVVDEVFEFEKG-PAASSYTLQNVSSSFTTSSASHFGSLQMNLHGVKAGTPSPRWE 712
Query: 166 GELQQPHVHKLAKVPGS---SNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFR 336
G +Q H++ G+ + SL+ ++KG +Q+ + KLP +
Sbjct: 713 GGVQMSHLNVAKGSIGNTQYNGSLYSSSNVKGPVQSS-SFSSLSSGLARSTAVKKLPASK 771
Query: 337 SDQDMNS-KAPYSAEAGQYPSVDEPPKESSMLEGNVPGQPMPSIRIAGSPLPNHSQSPNI 513
SDQD+ S ++P+S E G E ++ + + R A P S PN
Sbjct: 772 SDQDLASLRSPHSVEIGTV--------EEDLVSVGRSSRLLSPPRTASVRAPPPSAKPNG 823
Query: 514 LKNSSTGNLLASSKVTGHNSAGWINPYPTPESGAYTSDYNATHKQKGRKRTLVD---FIP 684
++S TG+L S KV G +S P S A +D + H + RKRT+ D IP
Sbjct: 824 PRSSVTGSLAGSIKVAGSSSLA-----SPPVSHAADTDIVSKHDKHPRKRTVSDMLSLIP 878
Query: 685 SFSGTQASC-LHNKRRKIS 738
S +A+ L NKRRKIS
Sbjct: 879 SLQDIEAATGLSNKRRKIS 897
>gb|EXB93237.1| GDP-mannose 3,5-epimerase 1 [Morus notabilis]
Length = 2195
Score = 84.7 bits (208), Expect = 3e-14
Identities = 89/269 (33%), Positives = 125/269 (46%), Gaps = 25/269 (9%)
Frame = +1
Query: 7 TSFSSVVDEVFEFDKPLPSTNQLALSHKSPLSNTINANSYHGISANVSSPNLEGELQQPH 186
+SFSSVVDEVFE ++ N + + S ++ N H I A +SP EG LQ
Sbjct: 656 SSFSSVVDEVFELERGPSMQNVSSPFNASSRFGSVPVN-LHAIKAGTASPKWEGTLQTSQ 714
Query: 187 VHKLAKVPGSSN----SLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFRSDQDMN 354
+ AKV ++ SLH ++KGS+Q + G KL +S+QD+
Sbjct: 715 ISNFAKVSSGASSYAASLHSPSNLKGSVQTNSLGSLSSIPGRGVAGT-KLSASKSEQDLP 773
Query: 355 S-KAPYSAEAGQYPSVDEPP--------------KESSMLEGNVPGQPMPSIRIAGSPLP 489
S ++P SAE G S+DE + S +L +P P R++GS +
Sbjct: 774 SLRSPQSAEFGSCTSMDEDQLRLLNDSSKDAIYGRLSQLLSPPLPTGP----RVSGSTV- 828
Query: 490 NHSQSPNILKNSSTGNLLASSKVTGHNS-AGWINPYPTPESGAYTSDYNATHKQKGRKRT 666
+ P I S +G L SSKV G +S A Y S +Y D + H++ RKRT
Sbjct: 829 -KANGPRI---SPSGPLAGSSKVAGSSSCATPALDYAVCRSPSY--DVLSKHEKNPRKRT 882
Query: 667 LVD---FIPSFSG--TQASCLHNKRRKIS 738
+ D IPS G T+ C KRRKIS
Sbjct: 883 VSDMLNLIPSLKGVETKGFC---KRRKIS 908
>gb|EOY11072.1| Mediator of RNA polymerase II transcription subunit 14 [Theobroma
cacao]
Length = 1813
Score = 75.9 bits (185), Expect = 1e-11
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 26/269 (9%)
Frame = +1
Query: 10 SFSSVVDEVFEFDK-----PLPSTNQLALSHKSPLSNTINA-NSYHGISANVSSPNLEGE 171
SFSS+VDEVFE +K P PS N + S SP S+ + + HG+ A SP E
Sbjct: 650 SFSSIVDEVFETEKGTSATPFPSQNFSSFS-SSPASHLGSVPMNIHGVKAGTPSPKWEVG 708
Query: 172 LQQPHVHKLAKVPGSS----NSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFRS 339
LQ ++ +AKV + +SL+ +KGS+Q+ G KL T +S
Sbjct: 709 LQVSQLNNVAKVSSPATHYGSSLYPSSGLKGSLQSSSFG-SLSSGTGRGTSAKKLSTSKS 767
Query: 340 DQDMNS-KAPYSAEAG-----QYPSVDEPPKE--SSMLEGNVPGQPMPSIRIAGSPLPNH 495
DQD+ S ++ +S E G Q +++ K+ S+ + P P++ + +
Sbjct: 768 DQDLASLRSNHSVELGALDEDQLRLLNDTSKDALSASRSSRLLSPPRPTVPRVSAQI--- 824
Query: 496 SQSPNILKNSSTGNLLASSKVTGHNSAGWINPYPTPESGAY-----TSDYNATHKQKGRK 660
PN ++SS+ NL AS + G S+ +P P ++ TS A H + RK
Sbjct: 825 -AKPNGPRSSSSANLTASVRFAG--SSPLASP-PVSQAAETPICHGTSHDVAKHDKNPRK 880
Query: 661 RTLVD---FIPSFSGTQASCLHNKRRKIS 738
RT+ D IPS G +A KR+K S
Sbjct: 881 RTVSDMLSLIPSLQGIEADAGIRKRKKTS 909
>ref|XP_006838871.1| hypothetical protein AMTR_s00002p00266990 [Amborella trichopoda]
gi|548841377|gb|ERN01440.1| hypothetical protein
AMTR_s00002p00266990 [Amborella trichopoda]
Length = 1853
Score = 69.7 bits (169), Expect = 1e-09
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 31/276 (11%)
Frame = +1
Query: 4 QTSFSSVVDEVFEFDKPLPSTNQLALSH-------KSPLSNTINANSYH-GISANVSSPN 159
Q+ FSS+ D+VF+F+K L++++ +PLS+ + + H I+A SP
Sbjct: 648 QSCFSSLADDVFDFEKAASLPQHLSVNNHVPLLVDSAPLSHLSSPQTSHQRITAGFISPR 707
Query: 160 LEGELQQPHVHKLAKV-----PGSSNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKL 324
E Q K++KV S+N HS KG ++ +L
Sbjct: 708 WEANSQFSQNSKISKVTISGPQFSNNPSFSSHSSKGLLETCPNNSLSPFGTVRSPSMQRL 767
Query: 325 PTFRSDQDMNS--KAPYSAEAGQYPSVDEPPKESS-MLEGNVPGQPMPSIRIAGSPLPNH 495
+SDQD+ S P+ + +DE +E+ M+ GN P P+
Sbjct: 768 SISKSDQDLTSLKSVPHPVQVSSASGIDESSEEAHVMVSGNRPTHPL------------R 815
Query: 496 SQSPNILKNSSTGNLLASSKVTGHNSAGWINPY----------PTPESGAYTSDYNATHK 645
+ P +L +SS LL SS T H NP T E+G S +A K
Sbjct: 816 TNDPRVLSSSSRTGLLRSSP-TRHIGCPLRNPMSSVWATSPVCQTSETGIPDSMSDAVKK 874
Query: 646 --QKGRKRTLVDFI---PSFSGTQASCLHNKRRKIS 738
+ RKR+L D I PS +A+ KRRK+S
Sbjct: 875 PEKTQRKRSLSDIIKLVPSLQEIEATTAMRKRRKMS 910
>gb|ESW19166.1| hypothetical protein PHAVU_006G101900g [Phaseolus vulgaris]
Length = 1815
Score = 69.3 bits (168), Expect = 1e-09
Identities = 78/262 (29%), Positives = 111/262 (42%), Gaps = 18/262 (6%)
Frame = +1
Query: 7 TSFSSVVDEVFEFDKPLPSTNQLALSHKSPLSNTINANSY-------HGISANVSSPNLE 165
+ FSS+VDEVF +K S L++ + NT + Y H + A SP E
Sbjct: 652 SGFSSLVDEVFGLEKG-SSVAPLSVQNVPSSGNTSLPSQYGSVPMNIHSLKAGSPSPKWE 710
Query: 166 GELQQPHVHKLAKVPGS----SNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTF 333
G +Q V+ + K G+ S SL S+KG +Q+ G KL
Sbjct: 711 GGMQMAQVNNVTKASGATSLYSGSLFSSGSVKGPVQSSSVG-SIPTGHVRNTAGKKLSAS 769
Query: 334 RSDQDMNS-KAPYSAEAGQYPSVDEPPKESSMLEGNVPGQPMPSIRIAGSPLPNHSQSPN 510
+S+QD+ S K+P+S + ++DE N S R+ P P S+ +
Sbjct: 770 KSEQDLASPKSPHSVDISSSIAIDEEQLRVLNDTSNEALSGSRSSRLLSPPRPTGSRM-S 828
Query: 511 ILKNSSTGNLLASSKVTGHNSAGWINPYPTPESG-AYTSDYNATHK--QKGRKRTLVD-- 675
I + G S KV G S T ES +Y + + T K +K RKRT D
Sbjct: 829 IPNSRPNGPQADSFKVIGSASCATTPVSQTLESTVSYIAGEDVTSKNDKKSRKRTASDML 888
Query: 676 -FIPSFSGTQASCLHNKRRKIS 738
IPS G + + KRRKIS
Sbjct: 889 TLIPSLQGVENNPGICKRRKIS 910
>ref|XP_006604844.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Glycine max]
Length = 1806
Score = 68.2 bits (165), Expect = 3e-09
Identities = 74/257 (28%), Positives = 112/257 (43%), Gaps = 13/257 (5%)
Frame = +1
Query: 7 TSFSSVVDEVFEFDK----PLPSTNQLALSHKSPLSNTINA--NSYHGISANVSSPNLEG 168
+ FSS+VDEVF +K P S L S + L + + ++H + A SP E
Sbjct: 651 SGFSSLVDEVFGLEKGSSMPPFSVKSLPSSVNTSLPSQYGSVPMNFHSLKAGSPSPKWEV 710
Query: 169 ELQQPHVHKLAKVPGSSNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFRSDQD 348
+Q V + K G++N +S+KG +Q+ G KL +S+QD
Sbjct: 711 GMQMSQVSNVTKASGATNH----YSVKGPLQSSSVG-SITTGQGRNSAGKKLSASKSEQD 765
Query: 349 MNS-KAPYSAEAGQYPSVDEPPKESSMLEGNVPGQPMPSIRIAGSPLPNHSQSPNILKNS 525
+ S K+P+S + ++DE N S R+ P P S+ +I +
Sbjct: 766 LASLKSPHSVDISSSSAMDEEQLRLLSDTSNDALSGSRSSRLLSPPRPTGSRM-SIPNSR 824
Query: 526 STGNLLASSKVTGHNSAGWINPYPTPESG-AYTSDYNATHK--QKGRKRTLVD---FIPS 687
G + S K G +S T ES +Y + + T K +K RKRT D IPS
Sbjct: 825 PNGLEVESFKAAGSSSCATTPVSQTLESTVSYNTGEDVTSKNDKKSRKRTASDMLTLIPS 884
Query: 688 FSGTQASCLHNKRRKIS 738
G +++ KRRKIS
Sbjct: 885 LQGVESNPGICKRRKIS 901
>ref|XP_004302054.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Fragaria vesca subsp. vesca]
Length = 1823
Score = 65.1 bits (157), Expect = 2e-08
Identities = 80/272 (29%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Frame = +1
Query: 7 TSFSSVVDEVFEFDKPLPSTNQLALSHKSPLSNTINAN------SYHGISANVSSPNLEG 168
+SFSSVVDEVFE +K L S +L + S N +++ + H + A + EG
Sbjct: 650 SSFSSVVDEVFELEKGL-SAPSFSLQNGSSSFNASSSHFGSAPMNLHSMKAGSPASKWEG 708
Query: 169 ELQQPHVHKLAKVPGS----SNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFR 336
+Q + A V G + S + +++KGSIQ+ + K+ +
Sbjct: 709 GMQMAQPNSAANVSGMATHYNGSFYPSNNMKGSIQS-ASLSSQAAAPGRSVSVKKISVSK 767
Query: 337 SDQDMNS-KAPYSAEAGQYPSVDEPPKE--SSMLEGNVPGQPMPSIRIAGSPLPN--HSQ 501
SDQD+ S ++P E G S+DE S +G G S R+ P P+
Sbjct: 768 SDQDLASLRSPLLVEYGS-TSMDEDHLRFMSDTSKGATYG--FRSSRLLSPPGPSGPRIS 824
Query: 502 SPNILKNSS---TGNLLASSKVTGHNSAGWINPYPTPESGAYTSDY-------NATHKQK 651
P + N TG + +V G NS TP S A S+ ++ H +K
Sbjct: 825 GPGMRPNGGNLPTGPPTGTIRVAGSNSC-----VTTPASRAPDSEVCDGPNHDDSDHDRK 879
Query: 652 GRKRTL---VDFIPSFSGTQASCLHNKRRKIS 738
RKRTL ++ IPS G +A+ KRRK+S
Sbjct: 880 LRKRTLPEMLNLIPSLQGVEANSGSGKRRKVS 911
>ref|XP_006577285.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Glycine max]
Length = 1814
Score = 63.5 bits (153), Expect = 7e-08
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 18/262 (6%)
Frame = +1
Query: 7 TSFSSVVDEVFEFDKPLPSTNQLALSHKSPLSNTINANSY-------HGISANVSSPNLE 165
+ FSS+VDEVF +K ST ++ + S NT + Y H + A SP E
Sbjct: 651 SGFSSLVDEVFGLEKG-SSTPPFSVKNLSSSVNTSLPSQYGSVPMTLHSLKAGSPSPKWE 709
Query: 166 GELQQPHVHKLAKVPGSSN----SLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTF 333
+Q P V + K ++N SL S+KG +Q+ G KL
Sbjct: 710 VGMQMPLVSNVTKASSATNHYSGSLFSSGSVKGPVQSSSVGSIPTGQGRNSAGT-KLSAS 768
Query: 334 RSDQDMNS-KAPYSAEAGQYPSVDEPPKESSMLEGNVPGQPMPSIRIAGSPLPNHSQSPN 510
+S+QD+ S K+ +S ++ ++DE N S R+ P P S+ +
Sbjct: 769 KSEQDLASLKSLHSVDSSSSAAMDEEQLRVFSDNSNDALAGSRSSRLLSPPRPTGSRM-S 827
Query: 511 ILKNSSTGNLLASSKVTGHNSAGWINPYPTPESG-AYTSDYNATHK--QKGRKRTLVD-- 675
I + G + S K G S T ES +Y + + T K +K KRT D
Sbjct: 828 IPNSRPNGPQVESFKAAGSGSCATTPVSQTLESTVSYNTGEDVTSKNDRKSGKRTASDML 887
Query: 676 -FIPSFSGTQASCLHNKRRKIS 738
IPS G +++ K+RKIS
Sbjct: 888 TLIPSLQGVESNSGICKKRKIS 909
>ref|XP_004494701.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X2 [Cicer arietinum]
Length = 1798
Score = 62.0 bits (149), Expect = 2e-07
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Frame = +1
Query: 7 TSFSSVVDEVFEFD-----KPLPSTNQLALSHKSPLSN--TINANSYHGISANVSSPNLE 165
+ FSS+VDEVF + P P N + S+ S S+ ++ NS H + A + SP E
Sbjct: 655 SGFSSLVDEVFGLEIGSSVPPFPIQNLASPSNTSLPSHYGSVPMNS-HSLKAGIPSPKWE 713
Query: 166 GELQQPHVHKLAKVPGSSNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFRSDQ 345
G +Q V+ + + + S+ +KG +Q+ G KL +S+Q
Sbjct: 714 GGMQISQVNNVTTL--YNGSMFSSGGVKGPVQSSSVGSIPTGQGRSTVGK-KLSASKSEQ 770
Query: 346 DMNS-KAPYSAEAGQYPSVDEPPKESSMLEGNVPGQPMPSIRIAGSPLPNHSQSPNILKN 522
D+ S K+P+S + +DE + L G+ P R S L S PN
Sbjct: 771 DLASVKSPHSVDISSSTPMDEDTANDA-LSGSRSSLLSPP-RPTNSRLSAPSSRPN---- 824
Query: 523 SSTGNLLASSKVTGHNSAGWINPYPTPESGAY--------TSDYNATHKQKGRKRT---L 669
G L+ S K G +S TP S + D + H +K RKRT +
Sbjct: 825 ---GPLVESFKAAGSSSCA-----TTPVSQGLECTVAFGTSEDVISEHDKKSRKRTASDM 876
Query: 670 VDFIPSFSGTQASCLHNKRRKIS 738
++ IPS G + + KRRKIS
Sbjct: 877 LNLIPSLQGVLKNQGNCKRRKIS 899
>ref|XP_004494700.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X1 [Cicer arietinum]
Length = 1799
Score = 62.0 bits (149), Expect = 2e-07
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Frame = +1
Query: 7 TSFSSVVDEVFEFD-----KPLPSTNQLALSHKSPLSN--TINANSYHGISANVSSPNLE 165
+ FSS+VDEVF + P P N + S+ S S+ ++ NS H + A + SP E
Sbjct: 656 SGFSSLVDEVFGLEIGSSVPPFPIQNLASPSNTSLPSHYGSVPMNS-HSLKAGIPSPKWE 714
Query: 166 GELQQPHVHKLAKVPGSSNSLHVIHSIKGSIQNDVTGXXXXXXXXXXXXXHKLPTFRSDQ 345
G +Q V+ + + + S+ +KG +Q+ G KL +S+Q
Sbjct: 715 GGMQISQVNNVTTL--YNGSMFSSGGVKGPVQSSSVGSIPTGQGRSTVGK-KLSASKSEQ 771
Query: 346 DMNS-KAPYSAEAGQYPSVDEPPKESSMLEGNVPGQPMPSIRIAGSPLPNHSQSPNILKN 522
D+ S K+P+S + +DE + L G+ P R S L S PN
Sbjct: 772 DLASVKSPHSVDISSSTPMDEDTANDA-LSGSRSSLLSPP-RPTNSRLSAPSSRPN---- 825
Query: 523 SSTGNLLASSKVTGHNSAGWINPYPTPESGAY--------TSDYNATHKQKGRKRT---L 669
G L+ S K G +S TP S + D + H +K RKRT +
Sbjct: 826 ---GPLVESFKAAGSSSCA-----TTPVSQGLECTVAFGTSEDVISEHDKKSRKRTASDM 877
Query: 670 VDFIPSFSGTQASCLHNKRRKIS 738
++ IPS G + + KRRKIS
Sbjct: 878 LNLIPSLQGVLKNQGNCKRRKIS 900