BLASTX nr result
ID: Zingiber25_contig00015170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00015170
(745 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 212 1e-52
ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group] g... 209 1e-51
ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [S... 193 6e-47
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 193 6e-47
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera] 193 6e-47
ref|XP_004973720.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 192 1e-46
ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 191 2e-46
ref|XP_006433911.1| hypothetical protein CICLE_v10001605mg [Citr... 191 2e-46
ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citr... 191 2e-46
gb|EOY15917.1| RNA-binding family protein, putative [Theobroma c... 187 3e-45
ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 187 4e-45
gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis] 186 5e-45
ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 186 5e-45
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop... 184 2e-44
gb|EMT07597.1| 33 kDa ribonucleoprotein, chloroplastic [Aegilops... 184 2e-44
gb|ACU23303.1| unknown [Glycine max] 184 2e-44
ref|NP_001150253.1| ribonucleoprotein [Zea mays] gi|195637832|gb... 184 4e-44
gb|ACF82264.1| unknown [Zea mays] gi|414869196|tpg|DAA47753.1| T... 184 4e-44
ref|XP_004501684.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 182 1e-43
ref|XP_002306558.1| RNA recognition motif-containing family prot... 182 1e-43
>ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Oryza
brachyantha]
Length = 352
Score = 212 bits (539), Expect = 1e-52
Identities = 106/158 (67%), Positives = 132/158 (83%), Gaps = 1/158 (0%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
RTRLIAQNIPW TADD++ALF KHG+V+D+ELSMYN SRNRGLAFVTM SE EA++ALN
Sbjct: 155 RTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMYNSSRNRGLAFVTMGSEEEALSALN 214
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEAEPVPKYNVFVGNLSRRVRSQDLREFFSGSENV 115
+LNS L+ R IKV+FARS KK PV + P+PK++VFVGNL+ RVRS+ LRE F+ + +
Sbjct: 215 NLNSTTLNDRTIKVDFARSRKKRPVVPSAPMPKHSVFVGNLTWRVRSRHLRELFASNPGL 274
Query: 114 LSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNG 4
S ++I+H T+PRR AGYGF+SFSSKE AEAAI+T+NG
Sbjct: 275 QSVEVIFHTTSPRRSAGYGFVSFSSKEAAEAAISTFNG 312
>ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group]
gi|42408160|dbj|BAD09298.1| putative RNA-binding protein
cp33 [Oryza sativa Japonica Group]
gi|113624042|dbj|BAF23987.1| Os08g0483200 [Oryza sativa
Japonica Group] gi|125561943|gb|EAZ07391.1| hypothetical
protein OsI_29641 [Oryza sativa Indica Group]
gi|125603790|gb|EAZ43115.1| hypothetical protein
OsJ_27706 [Oryza sativa Japonica Group]
gi|215686913|dbj|BAG90783.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215701414|dbj|BAG92838.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 269
Score = 209 bits (531), Expect = 1e-51
Identities = 104/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
RTRLIAQNIPW TADD++ALF KHG+V+D+ELSMYN +RNRGLAFVTM SE EA++ALN
Sbjct: 72 RTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMYNSTRNRGLAFVTMGSEEEALSALN 131
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEAEPVPKYNVFVGNLSRRVRSQDLREFFSGSENV 115
HLNS L+ R IKV+F RS KK V + P+PK++VFVGNL+ RVRS+ LRE F+ + V
Sbjct: 132 HLNSTTLNDRTIKVDFTRSRKKQYVVPSAPMPKHSVFVGNLTWRVRSRHLRELFASTPGV 191
Query: 114 LSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNG 4
S ++++H T+PRR AGYGF+SFSSKE AEAAI+T+NG
Sbjct: 192 QSVEVVFHTTSPRRSAGYGFVSFSSKEAAEAAISTFNG 229
>ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein
SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 193 bits (490), Expect = 6e-47
Identities = 100/162 (61%), Positives = 127/162 (78%), Gaps = 4/162 (2%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
RTRL+AQNIPW STAD+++ALF HG+V+ +ELSMY+ S+NRGLAFVTM SE +A+AAL
Sbjct: 71 RTRLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYSASKNRGLAFVTMGSEEDALAALT 130
Query: 294 HLNSYDLDGRVIKVEFARSVK---KTPVTEAEPVPKYNVFVGNLSRRVRSQDLREFFSGS 124
HLNS L+ R IKV+FAR K K PV + P+ KY VFVGNL+ RVR++ LRE F+ +
Sbjct: 131 HLNSTILNDRKIKVDFARPRKKQPKQPVVVSNPMEKYIVFVGNLTWRVRNRHLRELFASA 190
Query: 123 ENVLSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
V+SA++I+H T PRR AGY F+SFSSKE AEAAI+ +NGK
Sbjct: 191 PGVISAEVIFHTTTPRRSAGYAFVSFSSKETAEAAISAFNGK 232
>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product
[Vitis vinifera]
Length = 294
Score = 193 bits (490), Expect = 6e-47
Identities = 94/162 (58%), Positives = 130/162 (80%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
SRTRLIAQNIPW TA DI++LF K+GTVLD+ELSM+N +RNRGLAF++M S EA+AAL
Sbjct: 87 SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPVT--EAEPVPKYNVFVGNLSRRVRSQDLREFF-SG 127
++L SY+L+GR IKV +A KK P + + +PV YN+F+ NL + R++DLREFF SG
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSG 206
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+ NV+SA++I+H NPRR +GYGF+SF SKE+A+ A++++ G+
Sbjct: 207 NCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQ 248
>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 193 bits (490), Expect = 6e-47
Identities = 94/162 (58%), Positives = 130/162 (80%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
SRTRLIAQNIPW TA DI++LF K+GTVLD+ELSM+N +RNRGLAF++M S EA+AAL
Sbjct: 87 SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPVT--EAEPVPKYNVFVGNLSRRVRSQDLREFF-SG 127
++L SY+L+GR IKV +A KK P + + +PV YN+F+ NL + R++DLREFF SG
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSG 206
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+ NV+SA++I+H NPRR +GYGF+SF SKE+A+ A++++ G+
Sbjct: 207 NCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQ 248
>ref|XP_004973720.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Setaria
italica]
Length = 274
Score = 192 bits (488), Expect = 1e-46
Identities = 102/165 (61%), Positives = 126/165 (76%), Gaps = 7/165 (4%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
RTRL+AQNIPW T DD++ALF KHG+V+ +ELSMYN S+NRGLAFVTM SE EA+AALN
Sbjct: 71 RTRLVAQNIPWDYTGDDMRALFEKHGSVVGVELSMYNASKNRGLAFVTMGSEEEALAALN 130
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEAEPV------PKYNVFVGNLSRRVRSQDLREFF 133
+LNS LD R IKV+FAR KK P +PV KY +FVGNL+ RVR++ LRE F
Sbjct: 131 NLNSTTLDDRKIKVDFARPRKKQPKQVKQPVVVSDSTEKYILFVGNLTWRVRNRHLRELF 190
Query: 132 SGSENVLSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+ + VLSA++I+H T PRR AGY F+SFSSKE AEAAI++ NG+
Sbjct: 191 ASAPGVLSAEVIFHTTTPRRSAGYAFVSFSSKEAAEAAISSLNGQ 235
>ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 306
Score = 191 bits (486), Expect = 2e-46
Identities = 94/162 (58%), Positives = 126/162 (77%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
S+TRL+AQN+PW ST +DI+ALF +HGTVLDIELSM++ +RNRGLAFVTM S +EA AAL
Sbjct: 99 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAAL 158
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPV--TEAEPVPKYNVFVGNLSRRVRSQDLREFF-SG 127
N+L SY+ +GR +KV +A+ KK P + +P P +N+F+ NLS R++DLREFF S
Sbjct: 159 NNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISE 218
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+V+SA++I+H NPRR AGYGF+SF SK+ AE AI+ + GK
Sbjct: 219 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGK 260
>ref|XP_006433911.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536033|gb|ESR47151.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 331
Score = 191 bits (485), Expect = 2e-46
Identities = 94/162 (58%), Positives = 126/162 (77%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
S+TRL+AQN+PW ST +DI+ALF +HGTVLD+ELSM++ +RNRGLAFVTM S +EA AAL
Sbjct: 156 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAAL 215
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPVTEAEPVP--KYNVFVGNLSRRVRSQDLREFF-SG 127
N+L SY+ +GR +KV +A+ KK P +P P +N+F+ NLS R++DLREFF S
Sbjct: 216 NNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISE 275
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+V+SA++I+H NPRR AGYGF+SF SK+ AEAAI+ + GK
Sbjct: 276 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGK 317
>ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536032|gb|ESR47150.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 363
Score = 191 bits (485), Expect = 2e-46
Identities = 94/162 (58%), Positives = 126/162 (77%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
S+TRL+AQN+PW ST +DI+ALF +HGTVLD+ELSM++ +RNRGLAFVTM S +EA AAL
Sbjct: 156 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAAL 215
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPVTEAEPVP--KYNVFVGNLSRRVRSQDLREFF-SG 127
N+L SY+ +GR +KV +A+ KK P +P P +N+F+ NLS R++DLREFF S
Sbjct: 216 NNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISE 275
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+V+SA++I+H NPRR AGYGF+SF SK+ AEAAI+ + GK
Sbjct: 276 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGK 317
>gb|EOY15917.1| RNA-binding family protein, putative [Theobroma cacao]
Length = 290
Score = 187 bits (475), Expect = 3e-45
Identities = 88/162 (54%), Positives = 128/162 (79%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
S+TRLIAQN+PW T +DI++LF K+GTV+D+ELSM+N +RNRGLAFV+MAS EA+AAL
Sbjct: 84 SKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVELSMHNKARNRGLAFVSMASPEEALAAL 143
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPV--TEAEPVPKYNVFVGNLSRRVRSQDLREFFSG- 127
N+L SY+ +GR +++ +A+ KK P + +PVP +N+FV NLS R++ L+EFFS
Sbjct: 144 NNLESYEFEGRTLRLNYAKPKKKRPAPPEKPKPVPAFNLFVANLSYEARAKHLKEFFSSE 203
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
NV+SA++I+H NPR+ +GYGF+SF SK++A+AA++ + GK
Sbjct: 204 GANVVSAEVIFHENPRKSSGYGFVSFKSKKEADAAMSAFQGK 245
>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 187 bits (474), Expect = 4e-45
Identities = 91/161 (56%), Positives = 127/161 (78%), Gaps = 2/161 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
S+TRL+AQN+PW ST +DI++LF K+GTVLD+ELSMYN RNRGLAFVTM S EA+AAL
Sbjct: 97 SQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 156
Query: 297 NHLNSYDLDGRVIKVEFARSVKKTPVTEAEPVP-KYNVFVGNLSRRVRSQDLREFF-SGS 124
N+L SY+ +GR +++ +A+ K+ P +P P +N+FV NL R++DL+EFF SGS
Sbjct: 157 NNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGS 216
Query: 123 ENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
NV+SA++I++ NPRR +GYGF++F +K+DAEAAI+ + GK
Sbjct: 217 GNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGK 257
>gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis]
Length = 605
Score = 186 bits (473), Expect = 5e-45
Identities = 93/161 (57%), Positives = 124/161 (77%), Gaps = 3/161 (1%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
+ RL AQN+PW T +DI+ALF K+GTV D+ELSM+N +RNRGLAFVTM S EA+AALN
Sbjct: 405 KNRLYAQNVPWNCTPEDIRALFEKYGTVEDVELSMFNKTRNRGLAFVTMGSPEEALAALN 464
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEAEPVPK--YNVFVGNLSRRVRSQDLREFF-SGS 124
+L SY+LDGRVIK+++AR KK T +P P+ +N+FV NLS R++DLREFF S
Sbjct: 465 NLQSYELDGRVIKIDYARLRKKKVTTPMQPKPEVTFNLFVANLSFEARAKDLREFFNSEG 524
Query: 123 ENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+V+SA++I+H NPRR GYGF++F SK++AEAA++ GK
Sbjct: 525 HSVVSAEVIFHENPRRSLGYGFVAFKSKKEAEAALSAVQGK 565
>ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Glycine max] gi|571450000|ref|XP_006578310.1|
PREDICTED: 29 kDa ribonucleoprotein A,
chloroplastic-like isoform X2 [Glycine max]
Length = 297
Score = 186 bits (473), Expect = 5e-45
Identities = 93/161 (57%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
SRTRL+AQN+PW ST +DI++LF KHG VL +ELSMY +RNRGLAFV M S EA+ AL
Sbjct: 69 SRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKKNRNRGLAFVEMGSPEEALEAL 128
Query: 297 NHLNSYDLDGRVIKVEFARSVK-KTPVTEAEPVPKYNVFVGNLSRRVRSQDLREFF-SGS 124
N+L SY+ +GRVIKV +AR K KTP V +N+FV NLS ++DL+EFF SG+
Sbjct: 129 NNLESYEFEGRVIKVNYARPKKEKTPPPVKPKVVTFNLFVANLSYEASAKDLKEFFDSGT 188
Query: 123 ENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
V+SA+++Y NPRRP+GYGF+S+ SK++AEAA+A + GK
Sbjct: 189 GKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQGK 229
>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 345
Score = 184 bits (468), Expect = 2e-44
Identities = 94/162 (58%), Positives = 122/162 (75%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
SRTRL+AQN+PW ST +DI+ LF KHG VL++ELSMY +RNRGLAFV M S EA+ AL
Sbjct: 116 SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEAL 175
Query: 297 NHLNSYDLDGRVIKVEFARSVK-KTPVTEAEP-VPKYNVFVGNLSRRVRSQDLREFFS-G 127
N+L SY+ +GRVIKV +AR K KT +P V +N+FV NLS S+DL+EFF G
Sbjct: 176 NNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVANLSYEASSKDLKEFFDLG 235
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+ V+SA+++Y NPRRP+GYGF+SF SK++AEAA+A + GK
Sbjct: 236 TGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGK 277
>gb|EMT07597.1| 33 kDa ribonucleoprotein, chloroplastic [Aegilops tauschii]
Length = 278
Score = 184 bits (468), Expect = 2e-44
Identities = 94/159 (59%), Positives = 120/159 (75%), Gaps = 1/159 (0%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
+TRLIA NIPW T DDI+ LF K GTV+D+ELSM++ +NRGLAFVTM SE EA++AL
Sbjct: 80 KTRLIAMNIPWDFTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 139
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEAEPVPKYNVFVGNLSRRVRSQDLREFFSGSENV 115
+LN ++ R IKV+FA+ KK P + PV K VFVGNL+ RVRS+ LRE F+ + V
Sbjct: 140 NLNLSTVNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 199
Query: 114 LSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
S ++I+H T PRR AGY F+SFSSKE+AEAAI+T+NGK
Sbjct: 200 QSVEVIFHTTTPRRSAGYAFVSFSSKEEAEAAISTFNGK 238
>gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 184 bits (468), Expect = 2e-44
Identities = 94/162 (58%), Positives = 122/162 (75%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
SRTRL+AQN+PW ST +DI+ LF KHG VL++ELSMY +RNRGLAFV M S EA+ AL
Sbjct: 86 SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEAL 145
Query: 297 NHLNSYDLDGRVIKVEFARSVK-KTPVTEAEP-VPKYNVFVGNLSRRVRSQDLREFFS-G 127
N+L SY+ +GRVIKV +AR K KT +P V +N+FV NLS S+DL+EFF G
Sbjct: 146 NNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVANLSYEASSKDLKEFFDLG 205
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
+ V+SA+++Y NPRRP+GYGF+SF SK++AEAA+A + GK
Sbjct: 206 TGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGK 247
>ref|NP_001150253.1| ribonucleoprotein [Zea mays] gi|195637832|gb|ACG38384.1|
ribonucleoprotein [Zea mays]
Length = 275
Score = 184 bits (466), Expect = 4e-44
Identities = 96/162 (59%), Positives = 123/162 (75%), Gaps = 4/162 (2%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
+TRL+AQNIPW TAD+++ALF HG+V+ +ELSMY+ ++NRGLAFVTM SE EA+AAL
Sbjct: 70 KTRLVAQNIPWDCTADEMRALFESHGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALT 129
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEA---EPVPKYNVFVGNLSRRVRSQDLREFFSGS 124
HLNS L+ R IKV+FAR KK P A + KY VFVGNL+ RVR++ LRE F+ +
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQPKQPAVVSDATEKYVVFVGNLTWRVRNRHLRELFASA 189
Query: 123 ENVLSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
V+SA++I+H T PRR AGY F+SFSSKE A AAI+ +NGK
Sbjct: 190 PGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAAISAFNGK 231
>gb|ACF82264.1| unknown [Zea mays] gi|414869196|tpg|DAA47753.1| TPA:
ribonucleoprotein [Zea mays]
Length = 275
Score = 184 bits (466), Expect = 4e-44
Identities = 96/162 (59%), Positives = 123/162 (75%), Gaps = 4/162 (2%)
Frame = -2
Query: 474 RTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAALN 295
+TRL+AQNIPW TAD+++ALF HG+V+ +ELSMY+ ++NRGLAFVTM SE EA+AAL
Sbjct: 70 KTRLVAQNIPWDCTADEMRALFESHGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALT 129
Query: 294 HLNSYDLDGRVIKVEFARSVKKTPVTEA---EPVPKYNVFVGNLSRRVRSQDLREFFSGS 124
HLNS L+ R IKV+FAR KK P A + KY VFVGNL+ RVR++ LRE F+ +
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQPKQPAVVSDDTEKYVVFVGNLTWRVRNRHLRELFASA 189
Query: 123 ENVLSAKLIYH-TNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
V+SA++I+H T PRR AGY F+SFSSKE A AAI+ +NGK
Sbjct: 190 PGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAAISAFNGK 231
>ref|XP_004501684.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 287
Score = 182 bits (462), Expect = 1e-43
Identities = 92/161 (57%), Positives = 123/161 (76%), Gaps = 2/161 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
SRTRL+AQN+PW STA+DI++LF +HG VLD+ELS YN +RNRGLAFV M+S EA+AA
Sbjct: 83 SRTRLLAQNVPWTSTAEDIRSLFEQHGKVLDVELSRYNKNRNRGLAFVEMSSPEEALAAF 142
Query: 297 NHLNSYDLDGRVIKVEFARSVK-KTPVTEAEPVPKYNVFVGNLSRRVRSQDLREFF-SGS 124
N L SY+ +GRVI +++A K KTP + +N+FV NLS RS+DLREFF SGS
Sbjct: 143 NSLESYEFEGRVIHLKYAWPKKEKTPPPVKQNPITFNLFVANLSYEARSKDLREFFDSGS 202
Query: 123 ENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
V+SA++I++ NPRRP+GYGF+SF SK++A A++ + GK
Sbjct: 203 GRVVSAEVIFNENPRRPSGYGFVSFKSKKEATEALSAFEGK 243
>ref|XP_002306558.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222856007|gb|EEE93554.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 309
Score = 182 bits (462), Expect = 1e-43
Identities = 88/162 (54%), Positives = 125/162 (77%), Gaps = 3/162 (1%)
Frame = -2
Query: 477 SRTRLIAQNIPWASTADDIKALFAKHGTVLDIELSMYNGSRNRGLAFVTMASENEAVAAL 298
S+TRL A N+PW TA+DI+ALF K GTV+D+ELSMY+ RNRGLAFVTM S EAVAAL
Sbjct: 102 SKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVTMGSPEEAVAAL 161
Query: 297 NHLNSYDLDGRVIKVEFARSVKK--TPVTEAEPVPKYNVFVGNLSRRVRSQDLREFF-SG 127
N+L SY+ +GR +K+ +A++ KK +P +P P +N+FV NL +S+DL+EFF +
Sbjct: 162 NNLESYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLFVANLPFEAKSKDLKEFFIAE 221
Query: 126 SENVLSAKLIYHTNPRRPAGYGFISFSSKEDAEAAIATYNGK 1
NV+SA++I+H NPRRP+GYGF++F +K++A+ AI+T++ K
Sbjct: 222 GANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDK 263