BLASTX nr result
ID: Zingiber25_contig00014976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00014976
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT21505.1| Mismatch repair endonuclease PMS2 [Aegilops tausc... 149 5e-34
ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group] g... 148 8e-34
ref|XP_003575262.1| PREDICTED: mismatch repair endonuclease PMS2... 147 1e-33
dbj|BAJ86879.1| predicted protein [Hordeum vulgare subsp. vulgare] 145 4e-33
ref|XP_006647441.1| PREDICTED: DNA mismatch repair protein PMS1-... 144 1e-32
ref|XP_003536886.1| PREDICTED: DNA mismatch repair protein PMS1-... 143 3e-32
ref|XP_004495972.1| PREDICTED: DNA mismatch repair protein PMS1-... 142 5e-32
ref|XP_004955044.1| PREDICTED: DNA mismatch repair protein PMS1-... 141 1e-31
ref|XP_003591551.1| DNA mismatch repair protein [Medicago trunca... 141 1e-31
ref|XP_006575115.1| PREDICTED: DNA mismatch repair protein PMS1-... 140 2e-31
ref|XP_002454102.1| hypothetical protein SORBIDRAFT_04g024570 [S... 138 7e-31
ref|XP_002321013.1| DNA mismatch repair family protein [Populus ... 138 9e-31
emb|CBI36837.3| unnamed protein product [Vitis vinifera] 137 1e-30
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2... 137 1e-30
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] 137 1e-30
gb|AFW62794.1| hypothetical protein ZEAMMB73_304615 [Zea mays] 137 2e-30
gb|EXB36415.1| Mismatch repair endonuclease PMS2 [Morus notabilis] 136 3e-30
ref|XP_006840542.1| hypothetical protein AMTR_s00045p00213360 [A... 136 3e-30
ref|XP_004292655.1| PREDICTED: mismatch repair endonuclease PMS2... 136 3e-30
ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1... 135 6e-30
>gb|EMT21505.1| Mismatch repair endonuclease PMS2 [Aegilops tauschii]
Length = 1379
Score = 149 bits (375), Expect = 5e-34
Identities = 69/103 (66%), Positives = 87/103 (84%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
+KT GSSSLKDNII VFGL+TF+ L+ N +LSE C+VEGFLSKP G+GR + + +F+
Sbjct: 194 VKTQGSSSLKDNIITVFGLNTFKCLEPFNLALSEGCQVEGFLSKPGPGTGRNSGDRQFFY 253
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV+KLVNEL+RSS+S+Q+P+ +LNF IP TSYDV
Sbjct: 254 VNGRPVDMPKVTKLVNELYRSSNSRQYPVAVLNFCIPTTSYDV 296
>ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group]
gi|50726475|dbj|BAD34084.1| putative PMS2 postmeiotic
segregation increased 2 [Oryza sativa Japonica Group]
gi|113536823|dbj|BAF09206.1| Os02g0592300 [Oryza sativa
Japonica Group] gi|218191082|gb|EEC73509.1| hypothetical
protein OsI_07875 [Oryza sativa Indica Group]
gi|222623151|gb|EEE57283.1| hypothetical protein
OsJ_07338 [Oryza sativa Japonica Group]
Length = 923
Score = 148 bits (373), Expect = 8e-34
Identities = 69/103 (66%), Positives = 86/103 (83%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
L+T GSSSLKDNII VFGL+TF+ L N ++SE C+V+GFLSKP GSGR + + +F+
Sbjct: 209 LRTQGSSSLKDNIITVFGLNTFKCLQPFNVTISEGCQVDGFLSKPGPGSGRNSGDRQFFY 268
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKVSKLVNEL+RSS++KQ+P+ +LNF IP TSYDV
Sbjct: 269 VNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDV 311
>ref|XP_003575262.1| PREDICTED: mismatch repair endonuclease PMS2-like [Brachypodium
distachyon]
Length = 921
Score = 147 bits (372), Expect = 1e-33
Identities = 69/103 (66%), Positives = 86/103 (83%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GSSSLKDNII VFGL+TF+ L+ N ++ E C+VEGFLSKP GSGR + + +F+
Sbjct: 208 LKTQGSSSLKDNIITVFGLNTFKCLEPFNVTILEGCQVEGFLSKPGPGSGRNSGDRQFFY 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV+KLVNEL++SS+SKQ+P+ +LNF IP TSYDV
Sbjct: 268 VNGRPVDMPKVTKLVNELYKSSNSKQYPVAVLNFCIPTTSYDV 310
>dbj|BAJ86879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 780
Score = 145 bits (367), Expect = 4e-33
Identities = 67/103 (65%), Positives = 86/103 (83%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
+KT GSSSLKDNI+ VFGL+T + L+ N +LSE C+VEGFLSKP G+GR + + +F+
Sbjct: 208 VKTQGSSSLKDNIVTVFGLNTLKCLEPFNLALSEGCQVEGFLSKPGPGTGRNSGDRQFFY 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV+KLVNEL+RSS+S+Q+P+ +LNF IP TSYDV
Sbjct: 268 VNGRPVDMPKVTKLVNELYRSSNSRQYPLAVLNFCIPTTSYDV 310
>ref|XP_006647441.1| PREDICTED: DNA mismatch repair protein PMS1-like [Oryza
brachyantha]
Length = 921
Score = 144 bits (363), Expect = 1e-32
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
L+T GSSSLKDNII VFG +TF+ L N ++SE C+V+GFLSKP GSGR + + +F+
Sbjct: 209 LRTQGSSSLKDNIITVFGSNTFKCLQPFNVTISEGCQVDGFLSKPGPGSGRNSGDRQFFY 268
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVD+PKVSKLVNEL+RSS++KQ+P+ +LNF IP TSYDV
Sbjct: 269 VNGRPVDVPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDV 311
>ref|XP_003536886.1| PREDICTED: DNA mismatch repair protein PMS1-like isoform X1
[Glycine max]
Length = 944
Score = 143 bits (360), Expect = 3e-32
Identities = 67/103 (65%), Positives = 82/103 (79%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII V G++TF L+ + S+S+ CKVEGFLSK G+GR + YFF
Sbjct: 208 LKTQGSGSLKDNIITVLGMNTFSCLEPVTLSISDSCKVEGFLSKSGQGNGRNLVDRQYFF 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKVSK+VNEL+R ++SKQ+PIVILNFT+P +YDV
Sbjct: 268 VNGRPVDMPKVSKVVNELYRGANSKQYPIVILNFTVPTRTYDV 310
>ref|XP_004495972.1| PREDICTED: DNA mismatch repair protein PMS1-like [Cicer arietinum]
Length = 939
Score = 142 bits (358), Expect = 5e-32
Identities = 67/103 (65%), Positives = 80/103 (77%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII V G++TF L+ + +SE CKV+GFLSKP G+GR + YFF
Sbjct: 208 LKTQGSDSLKDNIITVLGMNTFNCLEPMALCISESCKVDGFLSKPGQGNGRNLGDRQYFF 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKVSKLVNEL+RS++SKQ+PI I NFT+P YDV
Sbjct: 268 VNGRPVDMPKVSKLVNELYRSANSKQYPIAIFNFTVPTKVYDV 310
>ref|XP_004955044.1| PREDICTED: DNA mismatch repair protein PMS1-like [Setaria italica]
Length = 840
Score = 141 bits (355), Expect = 1e-31
Identities = 64/103 (62%), Positives = 87/103 (84%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
L+T GSSS+KDNII VFGL+TF+SL+ + ++S+ C+VEGFLSKP G+GR + + +F+
Sbjct: 217 LRTQGSSSMKDNIITVFGLNTFKSLEPFSVTISDGCQVEGFLSKPGPGTGRNSGDRQFFY 276
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VN RPVDMPKV+KLVNEL+RSS++KQ+P+ +L+F IP TSYDV
Sbjct: 277 VNSRPVDMPKVTKLVNELYRSSNAKQYPVALLDFRIPTTSYDV 319
>ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
gi|355480599|gb|AES61802.1| DNA mismatch repair protein
[Medicago truncatula]
Length = 933
Score = 141 bits (355), Expect = 1e-31
Identities = 64/103 (62%), Positives = 82/103 (79%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT G+ SLKDNII V G++TF L+ ++ +SE CKV+GFLSKP G+GR + YFF
Sbjct: 208 LKTQGNDSLKDNIITVLGMNTFNCLEPMSLCISESCKVDGFLSKPGLGNGRNLGDRQYFF 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPK+ KLVNEL+RS++SKQ+PI I+NFT+P +YDV
Sbjct: 268 VNGRPVDMPKIGKLVNELYRSANSKQYPIAIMNFTVPTKAYDV 310
>ref|XP_006575115.1| PREDICTED: DNA mismatch repair protein PMS1-like [Glycine max]
Length = 946
Score = 140 bits (352), Expect = 2e-31
Identities = 65/103 (63%), Positives = 80/103 (77%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDN+I V G++TF L+ + S+S+ CKVEGFLSK G+GR + YFF
Sbjct: 208 LKTQGSGSLKDNVITVLGMNTFSCLEPVTLSISDSCKVEGFLSKSGQGNGRNLGDRQYFF 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKVSKLVNEL++ ++SKQ+PI ILNFT+P YDV
Sbjct: 268 VNGRPVDMPKVSKLVNELYKGANSKQYPIAILNFTVPTRVYDV 310
>ref|XP_002454102.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor]
gi|241933933|gb|EES07078.1| hypothetical protein
SORBIDRAFT_04g024570 [Sorghum bicolor]
Length = 780
Score = 138 bits (348), Expect = 7e-31
Identities = 62/103 (60%), Positives = 87/103 (84%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
L+T GSSS+KDNII VFG +TF+ L+ + + S+ C++EGFLSKP G+GR++ + +F+
Sbjct: 219 LRTQGSSSMKDNIITVFGPNTFKCLEPFSVTTSDGCQIEGFLSKPGPGTGRSSGDRQFFY 278
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRP+DMPKV+KLVNEL++SS++KQ+P+VIL+F IP TSYDV
Sbjct: 279 VNGRPIDMPKVTKLVNELYKSSNAKQYPVVILDFRIPTTSYDV 321
>ref|XP_002321013.1| DNA mismatch repair family protein [Populus trichocarpa]
gi|222861786|gb|EEE99328.1| DNA mismatch repair family
protein [Populus trichocarpa]
Length = 915
Score = 138 bits (347), Expect = 9e-31
Identities = 65/103 (63%), Positives = 81/103 (78%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII VFG++TF L+ ++ +S CKVEGFLSK GSGR + Y+F
Sbjct: 208 LKTQGSDSLKDNIITVFGVNTFSCLEPVDIDISGSCKVEGFLSKSGQGSGRNLGDRQYYF 267
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKVSKLVNEL++ ++S+Q+PI I+NFTIP T+ DV
Sbjct: 268 VNGRPVDMPKVSKLVNELYKGANSRQYPIAIMNFTIPTTACDV 310
>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 137 bits (345), Expect = 1e-30
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII VFG++TF L+ LN LS+ KV+GF+SK GSGRT + +FF
Sbjct: 212 LKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKVDGFVSKSGYGSGRTLGDRQFFF 271
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV KLVNEL++ ++S+Q+PI I+NFT+P +YDV
Sbjct: 272 VNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDV 314
>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
Length = 937
Score = 137 bits (345), Expect = 1e-30
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII VFG++TF L+ LN LS+ KV+GF+SK GSGRT + +FF
Sbjct: 212 LKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKVDGFVSKSGYGSGRTLGDRQFFF 271
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV KLVNEL++ ++S+Q+PI I+NFT+P +YDV
Sbjct: 272 VNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDV 314
>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 137 bits (345), Expect = 1e-30
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII VFG++TF L+ LN LS+ KV+GF+SK GSGRT + +FF
Sbjct: 2911 LKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKVDGFVSKSGYGSGRTLGDRQFFF 2970
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV KLVNEL++ ++S+Q+PI I+NFT+P +YDV
Sbjct: 2971 VNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDV 3013
>gb|AFW62794.1| hypothetical protein ZEAMMB73_304615 [Zea mays]
Length = 673
Score = 137 bits (344), Expect = 2e-30
Identities = 62/103 (60%), Positives = 86/103 (83%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
L+T GSSS+KD II VFG +TF+ L+ + + S+ C++EGFLSKP G+GR++ + +F+
Sbjct: 215 LRTQGSSSMKDTIITVFGPNTFKCLEPFSVTTSDGCQIEGFLSKPGPGTGRSSGDRQFFY 274
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRP+DMPKV+KLVNEL+RSS++KQ+P+VIL+F IP TSYDV
Sbjct: 275 VNGRPIDMPKVTKLVNELYRSSNAKQYPVVILDFHIPTTSYDV 317
>gb|EXB36415.1| Mismatch repair endonuclease PMS2 [Morus notabilis]
Length = 938
Score = 136 bits (343), Expect = 3e-30
Identities = 65/103 (63%), Positives = 80/103 (77%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII +FG+STF L+ L+ +S+ CKVEGFLSKP GSGR + +FF
Sbjct: 212 LKTQGSGSLKDNIITLFGISTFNCLEPLSLCISDGCKVEGFLSKPGQGSGRNLGDRQFFF 271
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV+KLVNEL+R S+S+Q PI I+N T+P + DV
Sbjct: 272 VNGRPVDMPKVTKLVNELYRGSNSQQHPIAIMNVTVPTGACDV 314
>ref|XP_006840542.1| hypothetical protein AMTR_s00045p00213360 [Amborella trichopoda]
gi|548842260|gb|ERN02217.1| hypothetical protein
AMTR_s00045p00213360 [Amborella trichopoda]
Length = 963
Score = 136 bits (343), Expect = 3e-30
Identities = 62/103 (60%), Positives = 81/103 (78%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII +FG+ F L+ LN +S++ +VEGFLSKP GSGR+ + +F+
Sbjct: 207 LKTQGSGSLKDNIITIFGIKVFSCLEPLNLDVSDNVQVEGFLSKPGCGSGRSMGDRQFFY 266
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKVSKLVNE ++SS+S+QFP+ I+NF +P + YDV
Sbjct: 267 VNGRPVDMPKVSKLVNEFYKSSNSRQFPVAIMNFIVPTSEYDV 309
>ref|XP_004292655.1| PREDICTED: mismatch repair endonuclease PMS2-like [Fragaria vesca
subsp. vesca]
Length = 913
Score = 136 bits (343), Expect = 3e-30
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNI+ +FG+STF L+ ++ S+S+ CKVEGFLSK GSGR + +FF
Sbjct: 213 LKTQGSGSLKDNIVTLFGMSTFSCLEPVSISVSDSCKVEGFLSKSGQGSGRNMGDRQFFF 272
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV+KLVNEL+R ++S+Q PI ILNFT+P + DV
Sbjct: 273 VNGRPVDMPKVTKLVNELYRGANSQQHPIAILNFTVPTRACDV 315
>ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1-like [Solanum
lycopersicum]
Length = 940
Score = 135 bits (340), Expect = 6e-30
Identities = 63/103 (61%), Positives = 78/103 (75%)
Frame = -2
Query: 312 LKTSGSSSLKDNIINVFGLSTFQSLDSLNFSLSEDCKVEGFLSKPQNGSGRTTAYKHYFF 133
LKT GS SLKDNII VFG+STF L+ L +S+DC VEGF+SK GSGR + YFF
Sbjct: 213 LKTQGSGSLKDNIITVFGMSTFTCLEPLEVCMSDDCTVEGFISKSGYGSGRNLGDRQYFF 272
Query: 132 VNGRPVDMPKVSKLVNELFRSSSSKQFPIVILNFTIPATSYDV 4
VNGRPVDMPKV KL+NEL+R ++S+Q+PI I+NF +P +DV
Sbjct: 273 VNGRPVDMPKVGKLINELYRGANSRQYPIAIMNFAMPPREFDV 315