BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00014666
         (2106 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   842   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   832   0.0  
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...   832   0.0  
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   827   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   827   0.0  
ref|XP_002446635.1| hypothetical protein SORBIDRAFT_06g019330 [S...   826   0.0  
ref|NP_001183867.1| RNA-dependent DNA polymerase [Zea mays] gi|8...   825   0.0  
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   823   0.0  
ref|XP_004978058.1| PREDICTED: probable RNA-dependent RNA polyme...   822   0.0  
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro...   820   0.0  
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]       819   0.0  
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   819   0.0  
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe...   818   0.0  
gb|EAY94464.1| hypothetical protein OsI_16234 [Oryza sativa Indi...   816   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...   813   0.0  
sp|Q7XM31.1|RDR2_ORYSJ RecName: Full=Probable RNA-dependent RNA ...   812   0.0  
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   809   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              808   0.0  
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   806   0.0  
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   806   0.0  

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score =  842 bits (2174), Expect = 0.0
 Identities = 424/663 (63%), Positives = 507/663 (76%), Gaps = 6/663 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            +FLAFSASQLRSNSVWMFASND +  + IR+WMG F  IRSVSKCAARMGQLFSSS+QT+
Sbjct: 462  QFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTL 521

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+T+ DG  YCFSDGIGKISL FA+Q+AQKCGL  TPSAFQIRYGGY
Sbjct: 522  PVPVQDVEVIPDIEVTS-DGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGY 580

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR SF KLSLR SMLKFES N ML+VTKWSE  PC+LNREIV LLSTLGV+DE 
Sbjct: 581  KGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDEN 640

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAV-KMLIQGYKPNSEPYLLMMLKA 717
            FE++ ++QM LLDKMLT+ + AL VL+++ G D +  + KML+QGY+PN EPYL MML+A
Sbjct: 641  FEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQA 700

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            +RE QL DIR++CRIFVPK RVLIGCLDET +L+YGQVY++VTMTK E +  N +F +  
Sbjct: 701  YRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKV 760

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D  T+ ++GKV+VTKNPCLHPGDIRVL AVY+  ++  GLVDC++FPQKG+RPHPNECSG
Sbjct: 761  DDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSG 820

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGD +F+CWDE LIP +T+APMDYT  RPRIMDHDV LEEIQK+FV+YMIND LG I
Sbjct: 821  GDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVI 880

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD EP KAR  KCLELA LHSMAVDFAKTGAPAEMPR L+PK FPDFMER +K
Sbjct: 881  STAHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDK 940

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETITSQCV----YDYDLLVXXXXXXXXXXXXYYSR 1605
            PM+ S G +GKLYRA  +   +  S  + S  +    YD+DL V            +   
Sbjct: 941  PMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEM 1000

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            +AEK+ +LMN+YGAE EDE+LTGNLRNK  YLQ+D +R+ EMKDR+LI VK+L++E   W
Sbjct: 1001 YAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEW 1060

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPDYRPET-RFLSFPWIVSDVLLRIKAAKTRKS*MSWQ 1962
               SC      KMASAWY VTYH  +  +T  FLSFPWIV +VLL IK+A +RK+  S  
Sbjct: 1061 LYGSCKPHQHQKMASAWYHVTYHSTFSSQTPNFLSFPWIVGEVLLVIKSANSRKAETSKD 1120

Query: 1963 VCV 1971
             C+
Sbjct: 1121 NCI 1123


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score =  832 bits (2150), Expect = 0.0
 Identities = 415/655 (63%), Positives = 500/655 (76%), Gaps = 6/655 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLR+NSVWMFASND ++AE +R+WMG FN I SVSKCAARMGQLFSSS QT+
Sbjct: 478  EFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARMGQLFSSSKQTL 537

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+T+ DG  YCFSDGIGKISL FARQ+AQKCGLS+TPSAFQIRYGGY
Sbjct: 538  VVPVQDVEMIPDVEVTS-DGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 596

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR SF KLSLRRSMLKFES N ML+VTKWSE  PCFLNREI+ LLSTLGVKD++
Sbjct: 597  KGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDDV 656

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            FE+MQ  Q+ LL KML + E AL VL  L+G D +   VKML+QGY+PN EPYL MML +
Sbjct: 657  FEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLS 716

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            H E QL D++S+CRI+VPKGR+LIGC DET +L+YGQV+++VTMT+EEL+ ++ +F    
Sbjct: 717  HHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRV 776

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D  T+ + GKVLVTKNPCLHPGD+RVL+AVY+  ++    VDC+IFPQKG+RPHPNECSG
Sbjct: 777  DDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSG 836

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGD++F+ WD +LIP ET+ PMDYT  R RIMDHDV LEEI K+FV+YMIND LGAI
Sbjct: 837  GDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAI 896

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD +P KAR SKCL LA LHSMAVDFAKTGAPAEMP AL+PK FPDFMER +K
Sbjct: 897  STAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDK 956

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETITSQCV----YDYDLLVXXXXXXXXXXXXYYSR 1605
            P + S GV+GKLYRA       + S  I S+ +    YD+DL V            +   
Sbjct: 957  PRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEM 1016

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            + E++ +LMNYYGA  EDEILTGNLRN+++YLQ+D +RYG+MKDR+L+  KNL+ E   W
Sbjct: 1017 YEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEW 1076

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPDY-RPETRFLSFPWIVSDVLLRIKAAKTRKS 1947
            F  SC E +  ++ASAWY VTY P Y +     LSFPWIV D+LL IK+  +RK+
Sbjct: 1077 FGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKSVNSRKA 1131


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score =  832 bits (2149), Expect = 0.0
 Identities = 417/654 (63%), Positives = 496/654 (75%), Gaps = 6/654 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVWMFAS+DNL AE IR+WMG F  IRS+SKCAARMGQLFSSS QT+
Sbjct: 462  EFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTL 521

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+ T DG  YCFSDGIGKISL FARQ+A KCG+++ PSAFQIRYGGY
Sbjct: 522  VVPTRDVEIIPDIEVNT-DGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGY 580

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR SF KLSLR SMLKFES N ML+VTK  +  PC+LNREI  LLSTLGVKDE 
Sbjct: 581  KGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDES 640

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            FE++Q +Q+ LL +MLTD ++AL VL+   G D     V+ML  GY+PN EPYL MML+A
Sbjct: 641  FEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQA 700

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            H      D+RS+CRIFVPKGR+L+GCLDET +L+YGQVY  +T+TK ELQ  N N+    
Sbjct: 701  HYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTI 760

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D+  + ++GKV+VTKNPCLHPGD+RVL+A++   ++  GLVDCLIFPQKG RPH NECSG
Sbjct: 761  DETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSG 820

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGDLYF+ WDENLIPP+T+APMDYT  RPRIMDHDVKLEEIQK+FV+YMIND LGAI
Sbjct: 821  GDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAI 880

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD EP KA  +KCLELA LHSMAVDFAKTGAPAEMPR L+P+ FPDFMERF+K
Sbjct: 881  STAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDK 940

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETITSQ----CVYDYDLLVXXXXXXXXXXXXYYSR 1605
            PM+ S  V+GKLYRAA    E   S  + S+     +YDYDL V            Y   
Sbjct: 941  PMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEM 1000

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            + EK+  LMNYYGAE+EDEIL G+LR++++YLQ+D ++YG+MKDR+L+ VKNL++EV  W
Sbjct: 1001 YIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEW 1060

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPDYRPETRF-LSFPWIVSDVLLRIKAAKTRK 1944
            F+ SC   +   MASAWY VTYHP Y  E  F  SFPW VSDVLL IKA  +++
Sbjct: 1061 FENSCDPLNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1114


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score =  827 bits (2137), Expect = 0.0
 Identities = 413/663 (62%), Positives = 500/663 (75%), Gaps = 6/663 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVWMFASND   AE IR+WMG FN I S+SKCAARMGQLFSSS QT 
Sbjct: 312  EFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARMGQLFSSSKQTF 371

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+T+ DG  YCFSDGIGKISL FARQ+AQKCGL+ TPSAFQIRYGGY
Sbjct: 372  IVSPQDMEIIPDIEVTS-DGINYCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRYGGY 430

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR SF KLSLR SM KFES N ML+VTKWSE  PC+LNREI+ LL+TLGVKDEI
Sbjct: 431  KGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIITLLTTLGVKDEI 490

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            FE +Q  Q+QLL++MLT+ E AL VL+ L+  + +   +KML+QGY+PN EPYL MML+A
Sbjct: 491  FEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPNVEPYLSMMLQA 550

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            + E  L+++RS+CRIFVPKGR+LIGCLDET +LDYGQVY+++TMTK ELQ  +       
Sbjct: 551  YHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRV 610

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D+ TA + GKV+VTKNPCLHPGDIRVL+AVY+  ++  GLVDC++FPQKG+RPHPNECSG
Sbjct: 611  DETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSG 670

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGD +F+ WD+ LIP ET++PMDY   RPR MDHDV LEEIQK+F++YMIND LGAI
Sbjct: 671  GDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAI 730

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD EP KAR SKCL+LA LHSMAVDFAKTGAPAEMP+AL+PK FPDFMER +K
Sbjct: 731  STAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDK 790

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETI----TSQCVYDYDLLVXXXXXXXXXXXXYYSR 1605
             M+ S GV+GKLYR          S+ +     ++  YD+DL V            +   
Sbjct: 791  KMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDM 850

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            + EKL  LM+YY A+ EDEILTGNL+NK+ YLQ+D +RYG+ KDR+LI VK+L++E   W
Sbjct: 851  YVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEW 910

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPDYRPE-TRFLSFPWIVSDVLLRIKAAKTRKS*MSWQ 1962
            F+  C  K+  ++ASAWY VTYHP Y  E    LSFPWIV+D+LL IK+A ++    S  
Sbjct: 911  FESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIKSANSKNLKTSSV 970

Query: 1963 VCV 1971
             C+
Sbjct: 971  PCI 973


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
          Length = 1119

 Score =  827 bits (2136), Expect = 0.0
 Identities = 407/654 (62%), Positives = 501/654 (76%), Gaps = 6/654 (0%)
 Frame = +1

Query: 4    FLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTMN 183
            FLAFSASQLRSNSVWMFASN+ + AE IR+WMG FN IRS+SKCAARMGQLFS+S+QTM 
Sbjct: 465  FLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTME 524

Query: 184  XXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGYK 363
                        E+T+ DG  YCFSDGIGKIS  FARQ+AQKCGL++TPSAFQIRYGGYK
Sbjct: 525  VKLQHVEILPDIEVTS-DGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYK 583

Query: 364  GVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEIF 543
            GVI  DR SF KLSLR SMLKFES N ML++TKWS+  PC+LNREIV LLSTLGV+D+ F
Sbjct: 584  GVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAF 643

Query: 544  ESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAV-KMLIQGYKPNSEPYLLMMLKAH 720
            E +  + + LL KMLT  E AL VL+++ G +++  + +ML+QGY PN EPYL MML++H
Sbjct: 644  EDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSH 703

Query: 721  REYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNAD 900
             E Q+ D+RS+CRIF+PKGR+L+GCLDET +L YGQVY+++TMTK ELQ    NF +  D
Sbjct: 704  FENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVD 763

Query: 901  QITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSGG 1080
            + TA + GKV+VTKNPCLHPGD+RVL+AVY+  ++    VDC+IFPQKG+RPHPNECSGG
Sbjct: 764  ETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGG 823

Query: 1081 DLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAIS 1260
            DLDGDLYF+CWDE+LIP +T  PMDYT  RPRIMDH+V LEEIQ++FV+YMI+D LGAIS
Sbjct: 824  DLDGDLYFICWDESLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAIS 883

Query: 1261 TTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEKP 1440
            T HLV+AD EP KA  SKCL+LA LHSMAVDFAKTGA AEMPR L+P+ FPDFMER++KP
Sbjct: 884  TAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKP 943

Query: 1441 MFNSPGVIGKLYRAASSYHEDLNSETITS----QCVYDYDLLVXXXXXXXXXXXXYYSRF 1608
            M+ S GV+GKLYR     +   NS+ +++    Q  YD+DLLV            + + +
Sbjct: 944  MYISEGVLGKLYRGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMY 1003

Query: 1609 AEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGWF 1788
             + + SL+NYYGAE E EILTGNLR KS YLQ+D +RY E+KDR+L+  K+L +EV GWF
Sbjct: 1004 LDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWF 1063

Query: 1789 KCSCPEKDLFKMASAWYQVTYHPDYRPET-RFLSFPWIVSDVLLRIKAAKTRKS 1947
               C E D  K+ASAWY VTYHP Y  E+   L FPW+V D+LL +K+  TRK+
Sbjct: 1064 TSCCQEDDHQKLASAWYHVTYHPSYCHESANCLGFPWVVGDILLNMKSHNTRKT 1117


>ref|XP_002446635.1| hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor]
            gi|241937818|gb|EES10963.1| hypothetical protein
            SORBIDRAFT_06g019330 [Sorghum bicolor]
          Length = 1128

 Score =  826 bits (2133), Expect = 0.0
 Identities = 419/651 (64%), Positives = 492/651 (75%), Gaps = 6/651 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLR NSVWMFASN++LTAESIR+WMGHF  IRSVSKCAARMGQLFSSS QT 
Sbjct: 464  EFLAFSASQLRGNSVWMFASNNSLTAESIRRWMGHFEDIRSVSKCAARMGQLFSSSRQTF 523

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGL--SNTPSAFQIRYG 354
                         E+T+ DG KY FSDGIGKIS  FARQIA+  GL  ++ PSAFQIRYG
Sbjct: 524  EISSYDVEVIPDIEVTS-DGTKYIFSDGIGKISTRFARQIAKLFGLDPAHPPSAFQIRYG 582

Query: 355  GYKGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKD 534
            GYKGVI  D  SF+ LSLR SM KFES +TML++T WS+ QPC++NREI+ LLSTLG+KD
Sbjct: 583  GYKGVITIDPTSFFNLSLRPSMKKFESKSTMLNITNWSKSQPCYVNREIISLLSTLGIKD 642

Query: 535  EIFESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAVKMLIQGYKPNSEPYLLMMLK 714
            E+FESMQ D M   D MLT+ E AL VL  + G D +TA +M++QGY+P+SEPYLLM+LK
Sbjct: 643  EVFESMQQDDMHESDGMLTNKEAALSVLGKIGGADTKTASEMVLQGYEPSSEPYLLMILK 702

Query: 715  AHREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKN 894
            AHR  +L DIR++C+I V KGRVLIGCLDET  LDYGQVYI++T  ++E +     F  N
Sbjct: 703  AHRANRLTDIRTRCKIHVQKGRVLIGCLDETCTLDYGQVYIRITKNRKEQKYSEQPFFCN 762

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  TA IVGKV VTKNPCLHPGD+RVL+AVYDP +D  GL+DC++FPQ+G+RPHPNECS
Sbjct: 763  DDGKTAVIVGKVAVTKNPCLHPGDVRVLEAVYDPALDARGLIDCVVFPQRGERPHPNECS 822

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDL+F+ WD+ LIP + DAPMDYT TRPRIMDH V LEEIQK+FVNYMIND LG 
Sbjct: 823  GGDLDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVNYMINDALGV 882

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HL++AD  P KAR  +CL+LA LHSMAVDFAKTGAPAEMP ALRP+ FPDFMER+E
Sbjct: 883  ISTAHLIHADRNPLKARSPECLQLAALHSMAVDFAKTGAPAEMPVALRPREFPDFMERWE 942

Query: 1435 KPMFNSPGVIGKLYRAASSYHEDLNSETI----TSQCVYDYDLLVXXXXXXXXXXXXYYS 1602
            +PM+ S  V+GKLYRAA  + E  N+E +      +CVYD DL V             Y 
Sbjct: 943  RPMYVSTSVLGKLYRAALRHEE--NAEALLPAGPPRCVYDPDLEVAGFDKFLDTAEEQYE 1000

Query: 1603 RFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDG 1782
             +AEKLG+LM YY AEHEDEILTGN+RNK  YL++D KRY EMKDR++  V  L  EV G
Sbjct: 1001 VYAEKLGTLMTYYSAEHEDEILTGNIRNKLVYLRRDNKRYFEMKDRIIAAVDALHAEVRG 1060

Query: 1783 WFKCSCPEKDLFKMASAWYQVTYHPDYRPETRFLSFPWIVSDVLLRIKAAK 1935
            W +    E D  K+ASAWY VTYHPD R E RF SFPW+  D LL IKAA+
Sbjct: 1061 WLRAR-KEDDASKLASAWYHVTYHPDRRGEKRFWSFPWVACDTLLAIKAAR 1110


>ref|NP_001183867.1| RNA-dependent DNA polymerase [Zea mays] gi|89473792|gb|ABD72708.1|
            RNA-dependent RNA polymerase [Zea mays]
            gi|374257933|gb|AEZ01781.1| RNA-dependent DNA polymerase
            [Zea mays] gi|414586834|tpg|DAA37405.1| TPA: mediator of
            paramutation1 [Zea mays]
          Length = 1127

 Score =  825 bits (2130), Expect = 0.0
 Identities = 415/649 (63%), Positives = 491/649 (75%), Gaps = 4/649 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLR NSVWMFASN +LTAE+IR+WMGHF  IRSVSKCAARMGQLFSSS QT 
Sbjct: 463  EFLAFSASQLRGNSVWMFASNSSLTAENIRRWMGHFEDIRSVSKCAARMGQLFSSSRQTF 522

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGL--SNTPSAFQIRYG 354
                         E+TT DG KY FSDGIGKIS  FARQ+A+  GL  ++ PSAFQIRYG
Sbjct: 523  EVSSYDVEVIPDIEVTT-DGTKYIFSDGIGKISTRFARQVAKLIGLDPAHPPSAFQIRYG 581

Query: 355  GYKGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKD 534
            GYKGVI  D  SF+ LSLR SM KFES +TML++T WS+ QPC++NREI+ LLSTLG+KD
Sbjct: 582  GYKGVITIDPTSFFNLSLRPSMKKFESKSTMLNITNWSKSQPCYVNREIISLLSTLGIKD 641

Query: 535  EIFESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAVKMLIQGYKPNSEPYLLMMLK 714
            E+FESMQ D M   D MLT+ E AL VL  + G D +TA  ML+QGY+P+SEPYLLM+LK
Sbjct: 642  EVFESMQQDDMHESDGMLTNKEAALSVLGKIGGGDTKTAADMLLQGYEPSSEPYLLMILK 701

Query: 715  AHREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKN 894
            AHR  +L DIR++C+I V KGRVLIGCLDET  L+YGQVYI++T   +E +     F  N
Sbjct: 702  AHRANRLTDIRTRCKIHVQKGRVLIGCLDETCKLEYGQVYIRITKNHKEQKYSEQPFFCN 761

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  TA IVGKV +TKNPCLHPGD+RVL+AVYDP +D  GL+DC++FPQ+G+RPHPNECS
Sbjct: 762  DDGKTAVIVGKVAITKNPCLHPGDVRVLEAVYDPGLDARGLIDCVVFPQRGERPHPNECS 821

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDL+F+ WD+ LIP + DAPMDYT TRPRIMDH V LEEIQK+FV+YMIND LGA
Sbjct: 822  GGDLDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVSYMINDTLGA 881

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HL++AD +P KAR  +C++LA LHSMAVDFAKTGAPAEMP ALRP+ FPDFMER+E
Sbjct: 882  ISTAHLIHADRDPLKARSPECVQLAALHSMAVDFAKTGAPAEMPLALRPREFPDFMERWE 941

Query: 1435 KPMFNSPGVIGKLYRAASSYHEDLNS--ETITSQCVYDYDLLVXXXXXXXXXXXXYYSRF 1608
            +PM+ S GV+GKLYRAA  + ED  +        CVYD DL V             Y  +
Sbjct: 942  RPMYVSNGVLGKLYRAALRHEEDAEALLPAGPPSCVYDPDLEVAGFDEFLDAAEERYEAY 1001

Query: 1609 AEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGWF 1788
            AE+LG+LM YY AE EDEILTGN+RNK  YL++D KRY EMKDR++  V  L  EV GW 
Sbjct: 1002 AERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNKRYFEMKDRIIAAVDALHAEVRGWL 1061

Query: 1789 KCSCPEKDLFKMASAWYQVTYHPDYRPETRFLSFPWIVSDVLLRIKAAK 1935
            + +C E D  ++ASAWY VTYHPD R E RF SFPWI+ D LL IKAA+
Sbjct: 1062 R-ACKEDDASRVASAWYHVTYHPDRRGEKRFWSFPWIICDTLLAIKAAR 1109


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  823 bits (2126), Expect = 0.0
 Identities = 405/654 (61%), Positives = 498/654 (76%), Gaps = 6/654 (0%)
 Frame = +1

Query: 4    FLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTMN 183
            FLAFSASQLRSNSVWMFASN+ + AE IR+WMG FN IRS+SKCAARMGQLFS+S+QTM 
Sbjct: 465  FLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTME 524

Query: 184  XXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGYK 363
                        E+T+ DG  YCFSDGIGKIS  FARQ+AQKCGL++TPSAFQIRYGGYK
Sbjct: 525  VQLQHVEILPDIEVTS-DGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYK 583

Query: 364  GVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEIF 543
            GVI  DR SF KLSLR SMLKFES N ML++TKWS+  PC+LNREIV LLSTLGV+D+  
Sbjct: 584  GVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAL 643

Query: 544  ESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAV-KMLIQGYKPNSEPYLLMMLKAH 720
            E +  + ++LL KMLT  E AL VL+++ G D++  + +ML+QGY PN EPYL MML++H
Sbjct: 644  EDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSH 703

Query: 721  REYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNAD 900
             E Q+ D+RS+CRIF+PKGR+L+GCLDET +L YG+VY+++TMTK ELQ    NF +  D
Sbjct: 704  FENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQNGQQNFFQKVD 763

Query: 901  QITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSGG 1080
            + TA + GKV+VTKNPCLHPGD+RVL+AVY+  ++    VDC+IFPQ G+RPHPNECSGG
Sbjct: 764  ETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGG 823

Query: 1081 DLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAIS 1260
            DLDGDLYF+CWDE+LIP +T  PMDYT  RPRIMDH+V LEEIQ++FV+YMI+D LGAIS
Sbjct: 824  DLDGDLYFICWDESLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAIS 883

Query: 1261 TTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEKP 1440
            T HLV+AD EP KA  SKCL+LA LHSMAVDFAKTGA AEMPR L+P+ FPDFMER++KP
Sbjct: 884  TAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKP 943

Query: 1441 MFNSPGVIGKLYRAASSYHEDLNSETITS----QCVYDYDLLVXXXXXXXXXXXXYYSRF 1608
            M+ S GV+GKLYR     +   NS+ +++    Q  YD+DLLV            +   +
Sbjct: 944  MYISEGVLGKLYRGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMY 1003

Query: 1609 AEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGWF 1788
             + + SL+NYYGAE E EILTGNLR KS YLQ+D +RY E+KDR+L+  K+L +EV GWF
Sbjct: 1004 LDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWF 1063

Query: 1789 KCSCPEKDLFKMASAWYQVTYHPDYRPET-RFLSFPWIVSDVLLRIKAAKTRKS 1947
               C E D  K+ SAWY VTYHP Y  E+   L FPW+V D+LL IK+  TRK+
Sbjct: 1064 SGCCTEDDHQKLVSAWYHVTYHPSYCHESANCLGFPWVVGDILLNIKSHNTRKT 1117


>ref|XP_004978058.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Setaria
            italica]
          Length = 1130

 Score =  822 bits (2122), Expect = 0.0
 Identities = 417/651 (64%), Positives = 493/651 (75%), Gaps = 6/651 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLR NSVWMFASND+L+AESIR+WMGHFN IRSVSKCAARMGQLFSSS QT 
Sbjct: 466  EFLAFSASQLRGNSVWMFASNDSLSAESIRRWMGHFNDIRSVSKCAARMGQLFSSSRQTF 525

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGL--SNTPSAFQIRYG 354
                         E+TT DG KY FSDGIGKIS  FARQIA+  GL  +N PSAFQIRYG
Sbjct: 526  EVSSYDVEVIPDIEVTT-DGNKYIFSDGIGKISSRFARQIAKTIGLDPNNPPSAFQIRYG 584

Query: 355  GYKGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKD 534
            GYKGVI  D  SF+ LSLR SM KFES +TML++T WS+ QPC++NREI+ LLSTLG+KD
Sbjct: 585  GYKGVIAVDPTSFYNLSLRPSMKKFESKSTMLNITNWSKSQPCYVNREIISLLSTLGIKD 644

Query: 535  EIFESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAVKMLIQGYKPNSEPYLLMMLK 714
            EIF SMQ D M   D+MLT+ E+AL VL  + G D + A +ML+QGY+P+SEPYLLM+LK
Sbjct: 645  EIFLSMQQDDMHESDEMLTNKEVALSVLGKIGGADTKIAAEMLLQGYEPSSEPYLLMILK 704

Query: 715  AHREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKN 894
            AHR  +L DIR++C+I V KGRVLIGCLDETS LDYGQVYI++T  ++E +     F  N
Sbjct: 705  AHRANRLTDIRTRCKIHVQKGRVLIGCLDETSKLDYGQVYIRITKNRKEQKYSEQPFFCN 764

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  TA IVGKV ++KNPCLHPGD+RVL+A+YDP +D  GLVDC++FPQ+G RPHPNECS
Sbjct: 765  DDGKTAVIVGKVAISKNPCLHPGDVRVLEAIYDPGLDARGLVDCVVFPQRGDRPHPNECS 824

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDL+F+ WD+ LIP + DAPMDYT TRPRIMDH V LEEIQK+FV+YMIND LG 
Sbjct: 825  GGDLDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHVVTLEEIQKHFVSYMINDALGV 884

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HL++AD  P KAR  +CL+LA LHSMAVDFAKTGAPAEMPRALRP+ FPDFMER+E
Sbjct: 885  ISTAHLIHADRNPLKARSPECLQLAALHSMAVDFAKTGAPAEMPRALRPREFPDFMERWE 944

Query: 1435 KPMFNSPGVIGKLYRAASSYHEDLNSETITSQ----CVYDYDLLVXXXXXXXXXXXXYYS 1602
            KPM+ S GV+GKLYR+A  + E  N+E +  +      YD DL              +Y 
Sbjct: 945  KPMYVSNGVLGKLYRSALRHAE--NAEALLPEGPACSEYDPDLECPGFHDFLDAAEEHYE 1002

Query: 1603 RFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDG 1782
             +AEKLG+LM YY AE EDEILTGN+RNK  YL++D KRY EMKDR++  V  L EEV G
Sbjct: 1003 AYAEKLGTLMTYYSAEREDEILTGNIRNKLVYLRRDNKRYFEMKDRIIAAVDALHEEVRG 1062

Query: 1783 WFKCSCPEKDLFKMASAWYQVTYHPDYRPETRFLSFPWIVSDVLLRIKAAK 1935
            W +    E+D  K+ASAWY VTYHP  R E RF SFPW+  D LL +KAA+
Sbjct: 1063 WLRAR-REEDASKLASAWYHVTYHPCRRGEKRFWSFPWLACDTLLAVKAAR 1112


>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score =  820 bits (2117), Expect = 0.0
 Identities = 409/667 (61%), Positives = 509/667 (76%), Gaps = 7/667 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVWMFASND +TAE +R+WMG F  IRSVSKCAARMGQLFSSS+ T+
Sbjct: 470  EFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAARMGQLFSSSLPTL 529

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+T+ DG  YCFSDGIGKISLPFAR++AQKCGL++TPSAFQIRYGGY
Sbjct: 530  VVPVQDVKIIPDIEVTS-DGINYCFSDGIGKISLPFAREVAQKCGLNDTPSAFQIRYGGY 588

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGV+  DR SF K+SLR SM KFES   ML+VTKWSE  PCFLNREIV LLSTLG+KDE 
Sbjct: 589  KGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVTLLSTLGIKDEA 648

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            FE++Q +Q+ LL +MLT+ E AL VL +L G D +   VKML+QGY+PN EPYL MML A
Sbjct: 649  FETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEPNVEPYLSMMLLA 708

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            +    L D++ +CRI+VPKG+VL+GCLDET+ L+YGQVY+++++ K EL+  + NF    
Sbjct: 709  NHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELEHADQNFFHKV 768

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D+ TA ++GKV+VTKNPCLHPGD+RVL+AVY+  ++  GLVDCL+FPQKG+RPHPNECSG
Sbjct: 769  DEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSG 828

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGD +F+ WD++LIP +TDAPMDYT +RPRIMDH+V LEEIQK+FV+YMIND LGAI
Sbjct: 829  GDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMINDTLGAI 888

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD EP KAR  KCLELA LHSMAVDFAKTGAPAEMPR+L+P+ FPDFM+R +K
Sbjct: 889  STAHLVHADREPDKARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPREFPDFMQRVDK 948

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETITS----QCVYDYDLLVXXXXXXXXXXXXYYSR 1605
            PM+ S GV+GKLYRA  +      S+ + S    + +YD+DL V            +   
Sbjct: 949  PMYASLGVLGKLYRATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEAFLSTAQTHKDM 1008

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            + EK+  LMNYY  E EDEILTGN+RNK+ +LQ+D +RYG+MKDR+L+ +KNL+ E    
Sbjct: 1009 YEEKMSFLMNYYEVESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLSMKNLQREARER 1068

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPDYRPET--RFLSFPWIVSDVLLRIKAAKTRKS*MSW 1959
            F+ SC   +  ++ASAWY VTYHP+Y  E+    LSFPWIV D+LL+IK+  +R+     
Sbjct: 1069 FENSCKVGEHQRLASAWYHVTYHPNYCQESMKSCLSFPWIVGDILLKIKSVNSREIQREQ 1128

Query: 1960 QVCVHMY 1980
             V  H+Y
Sbjct: 1129 PVFSHVY 1135


>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
          Length = 1115

 Score =  819 bits (2116), Expect = 0.0
 Identities = 406/655 (61%), Positives = 496/655 (75%), Gaps = 6/655 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRS++VWMFASNDN+ AE IR+WMG FN IRSVSKCAARMGQLFSSS QT+
Sbjct: 460  EFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSRQTL 519

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+TT DG  YCFSDGIGKIS  FARQ+AQKCGL  TPSAFQIRYGGY
Sbjct: 520  IVPTQDLEIIPDVEVTT-DGIDYCFSDGIGKISSSFARQVAQKCGLKETPSAFQIRYGGY 578

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  +R SF KLSLR SMLKFES+N ML+VTKWS   PC+LNREIV LLS+LGVKDE 
Sbjct: 579  KGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVSLLSSLGVKDES 638

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            F ++  +Q+ LL KM T+ E AL VL+ L+G D     VKML+QGY+PN+EPYL MM+++
Sbjct: 639  FLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEPNAEPYLSMMIQS 698

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            + E QL D++++CRIFVPKG+VLIGCLDET +L+YGQVY+++TM K EL+  N +F +  
Sbjct: 699  YYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELEAGNQSFFRKV 758

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D  T+ +VGKV+VTKNPCLHPGD+RVL+AVYD  ++  GLVDCL+FPQKG+RPHPNECSG
Sbjct: 759  DDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSG 818

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGDL+F+ WD NLIPP T APMDY   RPRIMDHDV LEEIQK+FV+YMIND LG I
Sbjct: 819  GDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGI 878

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HL++AD EP KA    CL+LA LHSMAVDFAKTGAPAEMPRALRP+ +PDFMER ++
Sbjct: 879  STAHLIHADREPEKAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDR 938

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETI----TSQCVYDYDLLVXXXXXXXXXXXXYYSR 1605
            PM+ S G +GKLYRA        +S  +    T++  YD DL V            +   
Sbjct: 939  PMYVSNGALGKLYRATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDM 998

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            + +K+  +MNYY  E EDE+LTGNLR ++AYLQ+D +RY E+KDR+L+ VK+L+ E  GW
Sbjct: 999  YIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGW 1058

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPD-YRPETRFLSFPWIVSDVLLRIKAAKTRKS 1947
            F+ SC   +  KMASAWY VTYHP+ Y+     LSFPWI  D+LL IK+  ++++
Sbjct: 1059 FEGSCEAMEQQKMASAWYHVTYHPNYYQKSINCLSFPWIKGDILLNIKSINSQRN 1113


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
          Length = 1122

 Score =  819 bits (2115), Expect = 0.0
 Identities = 420/657 (63%), Positives = 497/657 (75%), Gaps = 10/657 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVW+FASND + AE IR+WMG F  IRSVSKCAARMGQLFSSS QT 
Sbjct: 465  EFLAFSASQLRSNSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAARMGQLFSSSKQTF 524

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGL--SNTPSAFQIRYG 354
                         E+T+ DG  YCFSDGIGKISL FA+Q+AQK  L  S  PSAFQIRYG
Sbjct: 525  EMAPQDVDIIPDIELTS-DGINYCFSDGIGKISLSFAKQLAQKLKLDQSRIPSAFQIRYG 583

Query: 355  GYKGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKD 534
            GYKGVI  DR SF KLS+R SMLKFES N ML VTKWSE  PCFLNREI+ LLSTLGVKD
Sbjct: 584  GYKGVIAVDRHSFRKLSMRNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKD 643

Query: 535  EIFESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMML 711
            E   +MQ +Q+QLL KMLTD E AL VL++LSG D R+  VKML   Y+PNSEPYL MML
Sbjct: 644  EALLAMQEEQLQLLGKMLTDREAALDVLESLSGADSRSILVKMLNGFYEPNSEPYLSMML 703

Query: 712  KAHREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTK--EELQKENTNF 885
            KAH  YQL D++S+CRIFVPKGRVLIGCLDET +L+YGQV++++T+TK  E++  EN   
Sbjct: 704  KAHYAYQLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVFVRITVTKTKEKIGDENLQN 763

Query: 886  IKNADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPN 1065
            + + D  T  IVGKV+VTKNPCLHPGDIRVL A+Y+  ++  GL DCL+FPQKG RPHPN
Sbjct: 764  V-DGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLVFPQKGPRPHPN 822

Query: 1066 ECSGGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDN 1245
            ECSGGDLDGDL+F+ WD++LIPP+TD PMDYT  RPRIMDH V LEEI ++FV+YMIND 
Sbjct: 823  ECSGGDLDGDLFFISWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDT 882

Query: 1246 LGAISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFME 1425
            LGAIST HLV+AD EP KAR  KCLELA LHSMAVDFAKTGAPAEMPRAL+P+ FPDFME
Sbjct: 883  LGAISTAHLVHADREPEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFME 942

Query: 1426 RFEKPMFNSPGVIGKLYRAASSYHEDLNSETITSQC----VYDYDLLVXXXXXXXXXXXX 1593
            RF+KPM+ S GV+GKLYRA       + S  + S+      YD+ L V            
Sbjct: 943  RFDKPMYISNGVLGKLYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASS 1002

Query: 1594 YYSRFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEE 1773
            +   +A+K+ SLM++Y AE EDE+LTGNL+N+++YLQ+D +RYG+MKDR+LI VK+L+ E
Sbjct: 1003 HKEMYAQKMSSLMSFYDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQRE 1062

Query: 1774 VDGWFKCSCPEKDLFKMASAWYQVTYHPDYRPE-TRFLSFPWIVSDVLLRIKAAKTR 1941
               WF+  C   +   MASAWY VTYHP Y  E + FLSFPWIV D+LL IK+  T+
Sbjct: 1063 AKEWFESDCQPHEYQLMASAWYHVTYHPKYSHESSTFLSFPWIVGDILLHIKSVNTK 1119


>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  818 bits (2113), Expect = 0.0
 Identities = 411/650 (63%), Positives = 498/650 (76%), Gaps = 7/650 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRS+SVWMF+SNDN+ AE IR+WMG F+ IRS+SKCAARMGQLFSSS QT+
Sbjct: 463  EFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTL 522

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E T+ DG  YCFSDGIGKISL FAR++AQKCGL  TPSAFQIRYGGY
Sbjct: 523  VVPAQDVEIIPDVE-TSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGY 581

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  D +SF KLSLR SMLKFES N ML+VTKWS+  PC+LNREI+ LLSTLGVKDE 
Sbjct: 582  KGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDET 641

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIR-TAVKMLIQGYKPNSEPYLLMMLKA 717
            FE++Q +Q++LL KM T+   AL V + L+G D + T VKML+ GY+PN+EPYL MML+A
Sbjct: 642  FEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQA 701

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            + E  L D++S+CRIFVPKGRVL+GCLDET  LDYGQVY+++TMTK E +  + +F +  
Sbjct: 702  YYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKV 761

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D+ T  + GKV+VTKNPCLHPGD+RVL AVYD +++   +VDCLIFPQKG+RPHPNECSG
Sbjct: 762  DETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSG 821

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGDL+F+ WD++L+P  T  PMDY+  RPRIMDH V LEEIQK+FV+YMINDNLGAI
Sbjct: 822  GDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAI 881

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD EP KA   KCL+LA+LHSMAVDFAKTGAPAEM R L+PK FPDFMER +K
Sbjct: 882  STAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDK 941

Query: 1438 PMFNSPGVIGKLYRA--ASSYHEDLN---SETITSQCVYDYDLLVXXXXXXXXXXXXYYS 1602
            PM+ S G +GKLYRA   S   E  N   SE I ++  YD DL V            +  
Sbjct: 942  PMYISNGALGKLYRAVVGSVLQEKTNLVWSEQI-AEAAYDQDLEVDGLESVLEVAKGHRD 1000

Query: 1603 RFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDG 1782
             + EK+ ++MNYYGA  EDEILTGNLRN++AYLQ+D +RYG+MKDR+ + +KNL++E  G
Sbjct: 1001 MYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKG 1060

Query: 1783 WFKCSCPEKDLFKMASAWYQVTYHPDY-RPETRFLSFPWIVSDVLLRIKA 1929
             F+ SCP  +  +MASAWY VTYHP Y + +   LSFPWIV D+LL IKA
Sbjct: 1061 LFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1110


>gb|EAY94464.1| hypothetical protein OsI_16234 [Oryza sativa Indica Group]
          Length = 1136

 Score =  816 bits (2108), Expect = 0.0
 Identities = 412/652 (63%), Positives = 491/652 (75%), Gaps = 8/652 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLR NSVWMFASN +L A  IR+WMGHF  IRSVSKCAARMGQLFSSS QT 
Sbjct: 465  EFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTF 524

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGL--SNTPSAFQIRYG 354
                         EITT DG KY FSDGIGKISL FA+++A   GL  +N PSAFQIRYG
Sbjct: 525  EVLRWDVEVIPDIEITT-DGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYG 583

Query: 355  GYKGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKD 534
            GYKGVI  D  S   LSLR SM KFES + ML++T WS+ QPC++NREI+ LLSTLG++D
Sbjct: 584  GYKGVIAIDPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRD 643

Query: 535  EIFESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAVKMLIQGYKPNSEPYLLMMLK 714
            EIF +MQ D+M+  ++MLT+ E+AL VL  L G + +TAVKML+QGY+P+SEPYL M+LK
Sbjct: 644  EIFVAMQQDEMRETEEMLTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILK 703

Query: 715  AHREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKN 894
            AH+E +L DIR++C+I VPKGRVLIGCLDET VL+YGQVYI++T   +E +  N ++  N
Sbjct: 704  AHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYN 763

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  TAT+VGKV +TKNPCLHPGDIRVL+A+YDP  D +G+VDCL+FPQ+G+RPHPNECS
Sbjct: 764  DDGKTATVVGKVAITKNPCLHPGDIRVLEAIYDP--DLVGMVDCLVFPQRGERPHPNECS 821

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDLYF+ WD+ LIP + D PMDYT TRPRIMDH V LEEIQK+FV+YMIND+LGA
Sbjct: 822  GGDLDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGA 881

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HL++AD  P KAR  +CL+LA LHSMAVDFAKTGAPAEMPR LRP+ +PDFMER+E
Sbjct: 882  ISTAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWE 941

Query: 1435 KPMFNSPGVIGKLYRAASSYHED------LNSETITSQCVYDYDLLVXXXXXXXXXXXXY 1596
            KPM+ S GV+GKLYR+A  + E       L+S +      YD DL V            Y
Sbjct: 942  KPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEY 1001

Query: 1597 YSRFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEV 1776
            Y  + EKL +LMNYY AEHEDEILTGN+RNK  YL++D KRY EMKDR++  V  L  E 
Sbjct: 1002 YELYEEKLTTLMNYYRAEHEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREA 1061

Query: 1777 DGWFKCSCPEKDLFKMASAWYQVTYHPDYRPETRFLSFPWIVSDVLLRIKAA 1932
             GW   S  E+D  +MASAWY+VTYHPD R   RF SFPWI  D LL IKA+
Sbjct: 1062 RGWLLSSRKEEDASRMASAWYRVTYHPDRRRGKRFWSFPWIACDNLLAIKAS 1113


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score =  813 bits (2100), Expect = 0.0
 Identities = 409/658 (62%), Positives = 496/658 (75%), Gaps = 9/658 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVWMFASN+ + AE IRKWMG F+ IRSVSKCAARMGQLFSSS+QT 
Sbjct: 457  EFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTF 516

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+TT DG  YCFSDGIGKISL FA+Q+A KCGLS+TPSAFQIRYGGY
Sbjct: 517  VVPVQDVEIIPDIEVTT-DGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGY 575

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGV+  DR SF KLSLR SMLKF+S N ML+VTKWSE  PC+LNREI+ LLSTLGV DEI
Sbjct: 576  KGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEI 635

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            F+++Q  Q+  L KMLT+ E AL VL+ L+  D +   V+ML+QGY+PN EPYL MML+A
Sbjct: 636  FQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQA 695

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            + E  L+++RS+CRIFVPKGR+LIGCLDE+ +LDYGQVY+++TMTK ELQ  + +F +  
Sbjct: 696  YHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKV 755

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D+ T+TI+G+V VTKNPCLHPGDIRVL+AVYD  ++  GLVDC+IFPQ G RPHPNECSG
Sbjct: 756  DESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSG 815

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGD +F+ WDE L+P  T+APMDY   R RIMDH+V LEEIQ++FV+YMIND LGAI
Sbjct: 816  GDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAI 875

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV+AD EP KAR  KCL+LA LHSMAVDFAKTGAPAEMP  L+P+ FPDFMER EK
Sbjct: 876  STAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEK 935

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETIT-------SQCVYDYDLLVXXXXXXXXXXXXY 1596
             M+ S GV+GKLYR     H+    E          ++  YD DL V            Y
Sbjct: 936  QMYISDGVLGKLYR---DIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIY 992

Query: 1597 YSRFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEV 1776
              ++ EK+ +LM+YYGA+ EDEILTGNLR++  YLQ+D ++YG++KDR+L+ +KNLK+E 
Sbjct: 993  KEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEA 1052

Query: 1777 DGWFKCSCPEKDLFKMASAWYQVTYHPDYRPE-TRFLSFPWIVSDVLLRIKAAKTRKS 1947
              WF+ SC   +   MASAWY VTYHP Y  E    LSFPWIV D+LL IK+  +R +
Sbjct: 1053 KEWFESSCNPTEHQCMASAWYHVTYHPTYFHERMNCLSFPWIVGDILLNIKSLNSRNA 1110


>sp|Q7XM31.1|RDR2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 2; Short=OsRDR2
            gi|32492169|emb|CAE04828.1| OSJNBb0048E02.13 [Oryza
            sativa Japonica Group]
          Length = 1136

 Score =  812 bits (2097), Expect = 0.0
 Identities = 411/652 (63%), Positives = 490/652 (75%), Gaps = 8/652 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLR NSVWMFASN +L A  IR+WMGHF  IRSVSKCAARMGQLFSSS QT 
Sbjct: 465  EFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTF 524

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGL--SNTPSAFQIRYG 354
                         EITT DG KY FSDGIGKISL FA+++A   GL  +N PSAFQIRYG
Sbjct: 525  EVLRWDVEVIPDIEITT-DGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYG 583

Query: 355  GYKGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKD 534
            GYKGVI  D  S   LSLR SM KFES + ML++T WS+ QPC++NREI+ LLSTLG++D
Sbjct: 584  GYKGVIAIDPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRD 643

Query: 535  EIFESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAVKMLIQGYKPNSEPYLLMMLK 714
            EIF +MQ D+M+  ++MLT+ E+AL VL  L G + +TAVKML+QGY+P+SEPYL M+LK
Sbjct: 644  EIFVAMQQDEMRETEEMLTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILK 703

Query: 715  AHREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKN 894
            AH+E +L DIR++C+I VPKGRVLIGCLDET VL+YGQVYI++T   +E +  N ++  N
Sbjct: 704  AHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYN 763

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  TAT+VGKV +TKNPCLHPGDIRVL+A+YDP  D +G+VDCL+FPQ+G+RPHPNECS
Sbjct: 764  DDGKTATVVGKVAITKNPCLHPGDIRVLEAIYDP--DLVGMVDCLVFPQRGERPHPNECS 821

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDLYF+ WD+ LIP + D PMDYT TRPRIMDH V LEEIQK+FV+YMIND+LGA
Sbjct: 822  GGDLDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGA 881

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HL++AD  P KAR  +CL+LA LHSMAVDFAKTGAPAEMPR LRP+ +PDFMER+E
Sbjct: 882  ISTAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWE 941

Query: 1435 KPMFNSPGVIGKLYRAASSYHED------LNSETITSQCVYDYDLLVXXXXXXXXXXXXY 1596
            KPM+ S GV+GKLYR+A  + E       L+S +      YD DL V            Y
Sbjct: 942  KPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEY 1001

Query: 1597 YSRFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEV 1776
            Y  + EKL +LMNYY AE EDEILTGN+RNK  YL++D KRY EMKDR++  V  L  E 
Sbjct: 1002 YELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREA 1061

Query: 1777 DGWFKCSCPEKDLFKMASAWYQVTYHPDYRPETRFLSFPWIVSDVLLRIKAA 1932
             GW   S  E+D  +MASAWY+VTYHPD R   RF SFPWI  D LL IKA+
Sbjct: 1062 RGWLLSSRKEEDASRMASAWYRVTYHPDRRRGKRFWSFPWIACDNLLAIKAS 1113


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
            vesca]
          Length = 1136

 Score =  809 bits (2089), Expect = 0.0
 Identities = 403/655 (61%), Positives = 495/655 (75%), Gaps = 6/655 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVWMFASND++ AE IR WMG FN IRSVSKCAARMGQLFSSS QT+
Sbjct: 465  EFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAARMGQLFSSSTQTL 524

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E TT DG  YCFSDGIGKISL FARQ+AQKCGL++TPSAFQIRYGGY
Sbjct: 525  TVPQKDVELIPDIETTT-DGVSYCFSDGIGKISLSFARQVAQKCGLNDTPSAFQIRYGGY 583

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR SF KLSLR SMLKF+S N ML+VTKWS   PCFLNREI+ L+STLGV+DE 
Sbjct: 584  KGVIAVDRNSFRKLSLRSSMLKFDSDNRMLNVTKWSSSMPCFLNREIITLMSTLGVEDEA 643

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
            FE++Q +Q+ LL +M  D  +AL  L+ LSG D     VK+L+QGY+PN EPYL MML+A
Sbjct: 644  FEALQQEQLDLLGRMRKDRNVALSSLEKLSGADSNNILVKLLLQGYEPNLEPYLSMMLQA 703

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNA 897
            H E+ L D++S+CR++VPKGR+L+GCLDET  L+YGQVY+++TMTK E +  + +F +  
Sbjct: 704  HYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQEMGHQSFFQRV 763

Query: 898  DQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSG 1077
            D+ T  + GKV+VTKNPCLHPGDIRVL+AVYD  ++   +VDC++FPQKG+RPHPNECSG
Sbjct: 764  DEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQKGERPHPNECSG 823

Query: 1078 GDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAI 1257
            GDLDGDL+F+ WD++LIPP T  PMDY+  RPR MDHDV LEEIQK+FV+YMINDNLGAI
Sbjct: 824  GDLDGDLFFISWDKSLIPPTTVPPMDYSARRPRNMDHDVTLEEIQKFFVDYMINDNLGAI 883

Query: 1258 STTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEK 1437
            ST HLV++D EP KA   KCLELA+LHSMAVDFAKTGAPAE+   L+PK FPDFMER E+
Sbjct: 884  STAHLVHSDHEPEKAMSKKCLELADLHSMAVDFAKTGAPAELSWILKPKEFPDFMERVER 943

Query: 1438 PMFNSPGVIGKLYRAASSYHEDLNSETITSQC----VYDYDLLVXXXXXXXXXXXXYYSR 1605
            PM+ S G +GKLYRA  S      +  + SQ      YD +L V            +  +
Sbjct: 944  PMYISNGALGKLYRAIRSSVVQEQTIVVWSQQRAEEAYDRELEVQGFESFLEMAESHRDK 1003

Query: 1606 FAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGW 1785
            + EK+ SLMNYY A  EDEILTGNLRN++AYLQ+D +RY ++KDR+L+ +K L++E  GW
Sbjct: 1004 YIEKMRSLMNYYEATTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLSLKTLQKEAKGW 1063

Query: 1786 FKCSCPEKDLFKMASAWYQVTYHPDY-RPETRFLSFPWIVSDVLLRIKAAKTRKS 1947
            F+ SC   +  ++ASAWY VTY+  Y + +   LSFPWIV D+LL IK+  +R+S
Sbjct: 1064 FESSCKVSEQQRLASAWYHVTYNLAYFQEDMNCLSFPWIVGDILLNIKSLNSRRS 1118


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  808 bits (2086), Expect = 0.0
 Identities = 398/649 (61%), Positives = 492/649 (75%), Gaps = 6/649 (0%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVWMFASND + AE IR+WMG F  IRS+SKCA+RMGQLFSSSM T+
Sbjct: 463  EFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTL 522

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+ T DG  YCFSDGIGKISLPFARQ+A+KCGL++ PSAFQIRYGGY
Sbjct: 523  VVPVQDVEIIDDIEVKT-DGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGY 581

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGV+  DR SFWK+SLR SMLKFES   ML+VTKWSE  PCFLNREIV L STLG+KDE+
Sbjct: 582  KGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEV 641

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTAVKMLIQGYKPNSEPYLLMMLKAH 720
            FE MQ +Q+ LL KMLT+ E AL  L +L G + +  +  ++Q Y+PN +PYL MML+AH
Sbjct: 642  FERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEMLQFYEPNVQPYLSMMLQAH 701

Query: 721  REYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIKNAD 900
             E  L D++S+CRIFVPKGR+LIGCLDET  L+YGQVY+ + M K EL+  + ++ +  D
Sbjct: 702  YENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVD 761

Query: 901  QITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECSGG 1080
            + TA ++GKV+VTKNPCLHPGD+RVL+AVY+P ++  GLVDCL+FPQKG+RPHPNECSGG
Sbjct: 762  EETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGG 821

Query: 1081 DLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGAIS 1260
            DLDGD +F+ WD++LIP +T+ PMDYT  RPRIMDH+V LEEIQK+FV+YMIND LGAIS
Sbjct: 822  DLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAIS 881

Query: 1261 TTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFEKP 1440
            T HLV+AD EP KA    CL LA LHSMAVDFAKTGAPAEMPRAL+P+ FPDFM+R  KP
Sbjct: 882  TAHLVHADREPDKACSENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKP 941

Query: 1441 MFNSPGVIGKLYRAASSYHEDLNSETI----TSQCVYDYDLLVXXXXXXXXXXXXYYSRF 1608
            M+ S GV+GKLYRA  +      S+ +     ++ VYD+DL V            +   +
Sbjct: 942  MYTSSGVLGKLYRATINSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMY 1001

Query: 1609 AEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDGWF 1788
             E++  LM+YY  E+EDEILTGN+ NK+ +L +D +RYGEMK+R+++ VK+L+ E   WF
Sbjct: 1002 EERMSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWF 1061

Query: 1789 KCSCPEKDLF-KMASAWYQVTYHPDYRPE-TRFLSFPWIVSDVLLRIKA 1929
            K SC + D   K+ASAWY VTYHP+Y  E    LSFPWIV D+LLR+K+
Sbjct: 1062 KSSCSKADEHQKLASAWYYVTYHPNYFQERMNSLSFPWIVGDILLRVKS 1110


>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
            max]
          Length = 941

 Score =  806 bits (2082), Expect = 0.0
 Identities = 408/651 (62%), Positives = 493/651 (75%), Gaps = 8/651 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVW+FASNDNL A  IR+WMG FN IRSVSKCAARMGQLFSSSMQT 
Sbjct: 285  EFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTF 344

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+ + DG  YCFSDGIGKIS  FARQ+AQK  L +TPSAFQIRYGG+
Sbjct: 345  EVVSQDVEIIPDVEVIS-DGVSYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGF 403

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR+SF KLSLR SMLKFES N+ML VTKWSE  PCFLNREI+ LLSTLGVKDE+
Sbjct: 404  KGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEV 463

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
              +MQHDQ+ LL +MLTD++ AL VL++L+G D ++  VKML +  +PNSEPYL MMLKA
Sbjct: 464  LLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKA 523

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIK-N 894
            +  YQL D++S+CRIFVPKGRVL+GCLDET +L+YGQV++++T+TK   +  + N  K +
Sbjct: 524  YYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTREKFGDENLRKVD 583

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  T  IVGKV+VTKNPCLHPGDIRVL A+Y   ++  GL DCL+FPQKG RPHPNECS
Sbjct: 584  GDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECS 643

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDL+F+ WD++LIP +T+APMDYT  RPRIMDH V LEEIQ++FV+YMIND LGA
Sbjct: 644  GGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGA 703

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HLV+AD E  KA+  KCLELA LHSMAVDFAKTGAPA MPR L+P+ FPDFMER +
Sbjct: 704  ISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVD 763

Query: 1435 KPMFNSPGVIGKLYRAASSYHEDLNSETITSQC----VYDYDLLVXXXXXXXXXXXXYYS 1602
            KPM+ S GV+GKLYRA       +    + S+      YD  L V            +  
Sbjct: 764  KPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKE 823

Query: 1603 RFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDG 1782
             +AEK+ SLM++YGAE EDE+L GNL+N+++YLQ+D +RYG+MKDR+L+ VKNL+ E   
Sbjct: 824  MYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKE 883

Query: 1783 WFKCSCPEKDLFKMASAWYQVTYHPDY--RPETRFLSFPWIVSDVLLRIKA 1929
            WF+ SC   +   MASAWY VTYHP Y  R    FLSFPWIV ++LL+I++
Sbjct: 884  WFETSCEPHEYKPMASAWYHVTYHPSYYCRESPCFLSFPWIVGEILLQIRS 934


>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
            max]
          Length = 1121

 Score =  806 bits (2082), Expect = 0.0
 Identities = 408/651 (62%), Positives = 493/651 (75%), Gaps = 8/651 (1%)
 Frame = +1

Query: 1    EFLAFSASQLRSNSVWMFASNDNLTAESIRKWMGHFNGIRSVSKCAARMGQLFSSSMQTM 180
            EFLAFSASQLRSNSVW+FASNDNL A  IR+WMG FN IRSVSKCAARMGQLFSSSMQT 
Sbjct: 465  EFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTF 524

Query: 181  NXXXXXXXXXXXXEITTEDGKKYCFSDGIGKISLPFARQIAQKCGLSNTPSAFQIRYGGY 360
                         E+ + DG  YCFSDGIGKIS  FARQ+AQK  L +TPSAFQIRYGG+
Sbjct: 525  EVVSQDVEIIPDVEVIS-DGVSYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGF 583

Query: 361  KGVIVSDRKSFWKLSLRRSMLKFESANTMLSVTKWSEYQPCFLNREIVCLLSTLGVKDEI 540
            KGVI  DR+SF KLSLR SMLKFES N+ML VTKWSE  PCFLNREI+ LLSTLGVKDE+
Sbjct: 584  KGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEV 643

Query: 541  FESMQHDQMQLLDKMLTDTEIALRVLDTLSGPDIRTA-VKMLIQGYKPNSEPYLLMMLKA 717
              +MQHDQ+ LL +MLTD++ AL VL++L+G D ++  VKML +  +PNSEPYL MMLKA
Sbjct: 644  LLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKA 703

Query: 718  HREYQLLDIRSKCRIFVPKGRVLIGCLDETSVLDYGQVYIKVTMTKEELQKENTNFIK-N 894
            +  YQL D++S+CRIFVPKGRVL+GCLDET +L+YGQV++++T+TK   +  + N  K +
Sbjct: 704  YYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTREKFGDENLRKVD 763

Query: 895  ADQITATIVGKVLVTKNPCLHPGDIRVLQAVYDPLIDYLGLVDCLIFPQKGKRPHPNECS 1074
             D  T  IVGKV+VTKNPCLHPGDIRVL A+Y   ++  GL DCL+FPQKG RPHPNECS
Sbjct: 764  GDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECS 823

Query: 1075 GGDLDGDLYFVCWDENLIPPETDAPMDYTPTRPRIMDHDVKLEEIQKYFVNYMINDNLGA 1254
            GGDLDGDL+F+ WD++LIP +T+APMDYT  RPRIMDH V LEEIQ++FV+YMIND LGA
Sbjct: 824  GGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGA 883

Query: 1255 ISTTHLVYADSEPSKARCSKCLELANLHSMAVDFAKTGAPAEMPRALRPKIFPDFMERFE 1434
            IST HLV+AD E  KA+  KCLELA LHSMAVDFAKTGAPA MPR L+P+ FPDFMER +
Sbjct: 884  ISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVD 943

Query: 1435 KPMFNSPGVIGKLYRAASSYHEDLNSETITSQC----VYDYDLLVXXXXXXXXXXXXYYS 1602
            KPM+ S GV+GKLYRA       +    + S+      YD  L V            +  
Sbjct: 944  KPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKE 1003

Query: 1603 RFAEKLGSLMNYYGAEHEDEILTGNLRNKSAYLQKDRKRYGEMKDRMLIGVKNLKEEVDG 1782
             +AEK+ SLM++YGAE EDE+L GNL+N+++YLQ+D +RYG+MKDR+L+ VKNL+ E   
Sbjct: 1004 MYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKE 1063

Query: 1783 WFKCSCPEKDLFKMASAWYQVTYHPDY--RPETRFLSFPWIVSDVLLRIKA 1929
            WF+ SC   +   MASAWY VTYHP Y  R    FLSFPWIV ++LL+I++
Sbjct: 1064 WFETSCEPHEYKPMASAWYHVTYHPSYYCRESPCFLSFPWIVGEILLQIRS 1114